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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |
| Basic Information | |
|---|---|
| Family ID | F101458 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 102 |
| Average Sequence Length | 68 residues |
| Representative Sequence | VIQNEQELEVTRQRIAAFQDALLALRRNQSPSNYAQIAQNFLYEIKKMEEEVHEYLQRLPEPEHTGVA |
| Number of Associated Samples | 83 |
| Number of Associated Scaffolds | 102 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Bacteria |
| % of genes with valid RBS motifs | 83.33 % |
| % of genes near scaffold ends (potentially truncated) | 24.51 % |
| % of genes from short scaffolds (< 2000 bps) | 92.16 % |
| Associated GOLD sequencing projects | 79 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.70 |
| Hidden Markov Model |
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| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Bacteria (52.941 % of family members) |
| NCBI Taxonomy ID | 2 |
| Taxonomy | All Organisms → cellular organisms → Bacteria |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (19.608 % of family members) |
| Environment Ontology (ENVO) | Unclassified (22.549 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (40.196 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 52.08% β-sheet: 0.00% Coil/Unstructured: 47.92% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.70 |
| Powered by PDBe Molstar | |
| SCOP family | SCOP domain | Representative PDB | TM-score |
|---|---|---|---|
| a.47.2.1: t-snare proteins | d1fioa_ | 1fio | 0.82579 |
| a.2.17.1: VPS23 C-terminal domain | d2f6ma2 | 2f6m | 0.82012 |
| a.2.5.1: Prefoldin | d1fxkc_ | 1fxk | 0.81892 |
| a.26.1.1: Long-chain cytokines | d1lkia_ | 1lki | 0.81496 |
| f.38.1.4: FucP-like proton/sugar symporter | d3o7qa_ | 3o7q | 0.78217 |
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| Pfam ID | Name | % Frequency in 102 Family Scaffolds |
|---|---|---|
| PF01343 | Peptidase_S49 | 9.80 |
| PF01323 | DSBA | 1.96 |
| PF13751 | DDE_Tnp_1_6 | 1.96 |
| PF01152 | Bac_globin | 0.98 |
| PF08869 | XisI | 0.98 |
| PF05016 | ParE_toxin | 0.98 |
| PF13462 | Thioredoxin_4 | 0.98 |
| PF14104 | DUF4277 | 0.98 |
| PF07143 | CrtC | 0.98 |
| PF16277 | DUF4926 | 0.98 |
| PF01609 | DDE_Tnp_1 | 0.98 |
| PF04986 | Y2_Tnp | 0.98 |
| PF13401 | AAA_22 | 0.98 |
| PF00355 | Rieske | 0.98 |
| PF01850 | PIN | 0.98 |
| PF11784 | DUF3320 | 0.98 |
| PF13424 | TPR_12 | 0.98 |
| PF02738 | MoCoBD_1 | 0.98 |
| PF02687 | FtsX | 0.98 |
| PF01797 | Y1_Tnp | 0.98 |
| COG ID | Name | Functional Category | % Frequency in 102 Family Scaffolds |
|---|---|---|---|
| COG0616 | Periplasmic serine protease, ClpP class | Posttranslational modification, protein turnover, chaperones [O] | 19.61 |
| COG1943 | REP element-mobilizing transposase RayT | Mobilome: prophages, transposons [X] | 0.98 |
| COG2346 | Truncated hemoglobin YjbI | Inorganic ion transport and metabolism [P] | 0.98 |
| COG3039 | Transposase and inactivated derivatives, IS5 family | Mobilome: prophages, transposons [X] | 0.98 |
| COG3293 | Transposase | Mobilome: prophages, transposons [X] | 0.98 |
| COG3385 | IS4 transposase InsG | Mobilome: prophages, transposons [X] | 0.98 |
| COG5421 | Transposase | Mobilome: prophages, transposons [X] | 0.98 |
| COG5433 | Predicted transposase YbfD/YdcC associated with H repeats | Mobilome: prophages, transposons [X] | 0.98 |
| COG5659 | SRSO17 transposase | Mobilome: prophages, transposons [X] | 0.98 |
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| Name | Rank | Taxonomy | Distribution |
| All Organisms | root | All Organisms | 52.94 % |
| Unclassified | root | N/A | 47.06 % |
| Visualization |
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| Powered by ApexCharts |
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| Habitat | Taxonomy | Distribution |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 19.61% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 14.71% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 9.80% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 7.84% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 6.86% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 6.86% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 5.88% |
| Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 3.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 3.92% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil | 2.94% |
| Thermal Springs | Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs | 1.96% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.96% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 1.96% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 1.96% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 1.96% |
| Freshwater Lake | Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake | 0.98% |
| Wastewater | Environmental → Aquatic → Freshwater → Drinking Water → Unchlorinated → Wastewater | 0.98% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.98% |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.98% |
| Microbial Mat On Rocks | Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks | 0.98% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.98% |
| Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.98% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 0.98% |
| Visualization |
|---|
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| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000550 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300001431 | Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly | Environmental | Open in IMG/M |
| 3300003203 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 | Host-Associated | Open in IMG/M |
| 3300005174 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 | Environmental | Open in IMG/M |
| 3300005186 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 | Environmental | Open in IMG/M |
| 3300005289 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 | Host-Associated | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005445 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG | Environmental | Open in IMG/M |
| 3300005467 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG | Environmental | Open in IMG/M |
| 3300005552 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 | Environmental | Open in IMG/M |
| 3300005558 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 | Environmental | Open in IMG/M |
| 3300005559 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 | Environmental | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
| 3300005981 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 | Host-Associated | Open in IMG/M |
| 3300006196 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 | Host-Associated | Open in IMG/M |
| 3300006847 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 | Host-Associated | Open in IMG/M |
| 3300006852 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 | Host-Associated | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300007265 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 | Environmental | Open in IMG/M |
| 3300009038 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG | Environmental | Open in IMG/M |
| 3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
| 3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
| 3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
| 3300009147 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
| 3300009162 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2 | Host-Associated | Open in IMG/M |
| 3300009691 | Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2 | Environmental | Open in IMG/M |
| 3300009777 | Wastewater microbial communities from Netherlands to study Microbial Dark Matter (Phase II) - VDW unchlorinated drinking water | Environmental | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
| 3300011270 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG | Environmental | Open in IMG/M |
| 3300012201 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG | Environmental | Open in IMG/M |
| 3300012204 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG | Environmental | Open in IMG/M |
| 3300012207 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG | Environmental | Open in IMG/M |
| 3300012209 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG | Environmental | Open in IMG/M |
| 3300012349 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG | Environmental | Open in IMG/M |
| 3300012361 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG | Environmental | Open in IMG/M |
| 3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
| 3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
| 3300012922 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG | Environmental | Open in IMG/M |
| 3300012929 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
| 3300012977 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300016319 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H | Environmental | Open in IMG/M |
| 3300016357 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 | Environmental | Open in IMG/M |
| 3300016371 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 | Environmental | Open in IMG/M |
| 3300017997 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex | Environmental | Open in IMG/M |
| 3300018063 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2 | Environmental | Open in IMG/M |
| 3300018077 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1 | Environmental | Open in IMG/M |
| 3300018079 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1 | Environmental | Open in IMG/M |
| 3300018082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2 | Environmental | Open in IMG/M |
| 3300019249 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019259 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300019360 | White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG | Environmental | Open in IMG/M |
| 3300020170 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
| 3300020214 | Freshwater microbial communities from Lake Tanganyika, Tanzania - TA2015054 Kigoma Offshore 80m | Environmental | Open in IMG/M |
| 3300022195 | Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300025157 | Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 (SPAdes) | Environmental | Open in IMG/M |
| 3300025910 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027846 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300027882 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes) | Environmental | Open in IMG/M |
| 3300028590 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30 | Environmental | Open in IMG/M |
| 3300028792 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S | Environmental | Open in IMG/M |
| 3300030570 | Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Cnb12 (Eukaryote Community Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030903 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030904 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300030990 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031092 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031093 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300031954 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2) | Environmental | Open in IMG/M |
| 3300032059 | Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27 | Environmental | Open in IMG/M |
| 3300033551 | Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5 | Environmental | Open in IMG/M |
| 3300034643 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300034677 | Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R3 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
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| Protein ID | Sample Taxon ID | Habitat | Sequence |
| F24TB_134263973 | 3300000550 | Soil | MIQNEHELEVTRQRIKAFQDALMTLRXNQLPDNYAQIAQNFLYXIKRMEAEVHDYLQRCPAPEDPGVKIPV* |
| JGI1027J12803_1008644192 | 3300000955 | Soil | RQRIAAFQDALLALRRNQSSSNYAQIAKNFLYEIKQMEEEVHEYLQRLPEPEYTAVA* |
| F14TB_1004306782 | 3300001431 | Soil | MIQNEHELEVTRQRIKAFQDALMTLRHNQLPDNYAQIAQNFLYEIKRMEAEVHDYLQRCPAPEDPGVKIPV* |
| JGI25406J46586_101026472 | 3300003203 | Tabebuia Heterophylla Rhizosphere | VIQNEQELEVTRQRIAAFQDALLALRRNQSPSNYAQIAKNFLYEITKMEEEIHEYLQRLPEPEHTAVA* |
| Ga0066680_103093362 | 3300005174 | Soil | MIQNALELEVTRQRITALQDALIALRRNQLPRNYTQIAKNFLHEIKKMEEEVHAYLQCFPAPEHTPTKIPV* |
| Ga0066676_104491782 | 3300005186 | Soil | MIQNEHELEVTRQRIKAFQDALMVLRHNQLPDNYAQIAQNFLYEIKRMETEVHDYLQRCPAPEDPGVKIPV* |
| Ga0066676_109213181 | 3300005186 | Soil | MIQNALELEVTRQRIKAFQDALMALRDNQSPSNYAQIAKNFLYEIKKMEEEVHAYLECFPAPEHTPTKIPV* |
| Ga0065704_103176502 | 3300005289 | Switchgrass Rhizosphere | VIQNEQELEVTRQRIAAFQDALLALRRNQSSSNYTQIAKNFLYEIKQMEKEVHEYLQRLPEPEHTGVA* |
| Ga0066388_1051382461 | 3300005332 | Tropical Forest Soil | MIQNEHELEVTRQRIKAFQDALLALRQNQVPDNYPQIAQNFLYEITKMEAEVHEYLQRCP |
| Ga0070708_1003831241 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MIQNESELEVTRQRIKAFQDALIALRRNQLPSNYAQIATNFLHEIKKMEEEVHEYLQRFPTPEYTPAKIPL* |
| Ga0070708_1003943082 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | VIQNEQELEVTRQRITALQDALLALRRNQSPSNYTQIAKNFLYEIKKMEEEVHAYLQRLPEPEHTAVA* |
| Ga0070708_1008718932 | 3300005445 | Corn, Switchgrass And Miscanthus Rhizosphere | MIQNEHELEVTRQRITAFQDALLALRRTQLPVNYPQIAQNFLYEIQKMEAEVHAYLQHCPAPENPAVKIPV* |
| Ga0070706_1008364852 | 3300005467 | Corn, Switchgrass And Miscanthus Rhizosphere | MIQNEHELEVTRQRITAFQDALLALRRTQLPANYPQIAQNFLYEIQKMEAEVHAYLQHCPAPENPAVKIPV* |
| Ga0066701_106815312 | 3300005552 | Soil | VIQNEQELEVTRQRITAFQDALLALRRNQSPSNYAQIAKNFLYEIKKMEQEVHEYLQRLPEPEHTVVA* |
| Ga0066698_103885353 | 3300005558 | Soil | MIQNEHELEVTRQRIKAFQDALMALRHNQLPDNYAQIAQNFIYEIKRMEAEVHDYLQRCPAPEDPGVKIPV* |
| Ga0066700_108998222 | 3300005559 | Soil | VIQNEQELEVTRQRITAFQDALLALRRNQSPSNYTQIAKNFLYEIKKMEEEVHAYLQRVPEPEHTTVA* |
| Ga0066903_1018930333 | 3300005764 | Tropical Forest Soil | MIQNEHELEVTRQRIKAFQDALLALRQNQVPDNYPQIAQNFLYEITKMEAEVHEYLQRCPAPDNPAEKIPI* |
| Ga0081455_104125792 | 3300005937 | Tabebuia Heterophylla Rhizosphere | VIQNEQELEVTRQRIAAFQDALLALRRNQSPSNYAQIAQNFLYEIKKMEEEVHEYLQRLPEPEHTGVA* |
| Ga0081538_100404602 | 3300005981 | Tabebuia Heterophylla Rhizosphere | VIQNEQELEVTRQRIGAFQDALLALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLSEPEHTAVT* |
| Ga0075422_102224172 | 3300006196 | Populus Rhizosphere | VIQNEQELEVTRQRIAAFQDALLALRRNQSSSNYAQIAKNFLYEIKQMEKEVHEYLQRLPEPEHTGVA* |
| Ga0075431_1021873001 | 3300006847 | Populus Rhizosphere | VVIQNEQELEVTRQRIAAFQDALLALRRNQSSSNYAQIAKNFLYEIKQMEKEVHEYLQRLPEPEHTGVA* |
| Ga0075433_100574272 | 3300006852 | Populus Rhizosphere | VIQNEQELEVTRQRIAAFQDALLALRRHLVEQLRKIAKNFLYEIKQMEKEVHDYLQRLPEPEHTGVA* |
| Ga0075425_1029531402 | 3300006854 | Populus Rhizosphere | VIQNEQELEVTRQRIAAFQDALLALRRNQSPSNYAQIAKNFLYEIKKMEEEIHEYLQRLPEPEHTAVA* |
| Ga0075434_1004377032 | 3300006871 | Populus Rhizosphere | VIQNEQELEVTRQRIAAFQDAMLALRRHQSSSNYAQIAKNFLYEIKQMEKEVHDYLQRLPEPEHTGVA* |
| Ga0099794_103672342 | 3300007265 | Vadose Zone Soil | VIQNEQELEVTRQRIAAFQNALLALRRNQSPSNYAQIAKNFLYEIKKMEEEGHEYLQRLPDPEHITVA* |
| Ga0099829_102937581 | 3300009038 | Vadose Zone Soil | VIQNEQELEVTRQRIAAFQNALLALRRNQSPSNYAQIAKNFLYEIKKMEEEVDEYLQR |
| Ga0099829_105158292 | 3300009038 | Vadose Zone Soil | MIQNEHELEVTRQRITAFQDALIALRHNQLPDNYAQIAQNFLYEIKRMEAEVHDYLQRCPAPEDPGVQIPV* |
| Ga0099827_105389382 | 3300009090 | Vadose Zone Soil | MQHEQALEVTRQRIIAFQDALLALRRNQSPSQYAPIAKNFLYEIKKMEEEGHEYLQRLPDPEHITVA* |
| Ga0099827_106205502 | 3300009090 | Vadose Zone Soil | RTARHCGGTIVIRNQQELEVTRQRIKAFQDALIALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLPEPEHTAVV* |
| Ga0075418_105068282 | 3300009100 | Populus Rhizosphere | VIQNEQELEVTRQRIAAFQDALLALRRNQSSSNYAQIAKNFLYEIKQMEEEVHEYLQRLPEPEYTAVA* |
| Ga0066709_1044595212 | 3300009137 | Grasslands Soil | MIQNEHELEVTRQRITAFQDALMALRHNQLPDNYAQIAQNFLYEIKRMETEVHDYLQRCPAPEDPGVKIPV* |
| Ga0114129_110018642 | 3300009147 | Populus Rhizosphere | MIQNALELEVMRQLIKVFQDVLLTLRRHQLQSSYAQIAKNFLREIKRMEEEVHAYLGCFPAPEHIPTKIPV* |
| Ga0111538_141241231 | 3300009156 | Populus Rhizosphere | VIQNEQELEVTRQRIAAFQDALLALRRNQSSSNYAQIAKNFLYEIKQMEKEVHEYLQRLPEP |
| Ga0075423_118254812 | 3300009162 | Populus Rhizosphere | AVTRQRIAAFQDALLALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRFPEPEHTTVT |
| Ga0075423_124945262 | 3300009162 | Populus Rhizosphere | VIQNEQELEVTRQRITAFQDALLVLRRNQSPSNYAQIAKNFLYDIKKMEEEVHEYLQRLPEPEHTAVA* |
| Ga0114944_14382202 | 3300009691 | Thermal Springs | VVIQNEHELEVTRKRIQAFQDSLLALRRNQLAGNCPQIAKNFLYEIKKMEEEVHEYLQRSPAPEGPAVKTPV* |
| Ga0105164_104056072 | 3300009777 | Wastewater | VIRNEQELEVTRQRIKAFQDALIALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLPEPEHTAVV* |
| Ga0126382_109151182 | 3300010047 | Tropical Forest Soil | VTRQRIKAFQDALMALRHNQLPDNYAQIAQNFLYEIKRMEAEVHDYLQRCPAPEDPGVKIPV* |
| Ga0126382_125426802 | 3300010047 | Tropical Forest Soil | VIQNEQELEVTRQRITAFQDARLALRRNQSPSNYAQIAQNFLYEIKKMEEEVHEYLQRLPEPEHTGVA* |
| Ga0126370_101579574 | 3300010358 | Tropical Forest Soil | VWYYGDSVLIQNEHELEVTRQCIKAFQDVLLTLRQNQLPGNYPQIAQNFLYEITKMEAEVHKYLQRCPAPDNPAEKIPI* |
| Ga0126376_110124912 | 3300010359 | Tropical Forest Soil | VIQNEQELEVTRQRITAFQDALLALRRNQSPSNYAQIAKNFLYEIKKMEEEIHEYLQRLPEPEHTAVA* |
| Ga0126376_116520371 | 3300010359 | Tropical Forest Soil | DVMIQNEHELEVTRQRIKAFQDALLALRQNQLPGNYPQIAQNFLYEITKMEAEVHEYLQRCPASDNPAEKIPI* |
| Ga0126376_125846741 | 3300010359 | Tropical Forest Soil | PPRRRTAWHCGGLVVIQNEQELEVTRQRIAAFQDALLALRRNQSSSNYAQIAKNFLYEIKQMEKEVHEYLQRLPEPEQTGVA* |
| Ga0126372_112620161 | 3300010360 | Tropical Forest Soil | MIQNEHELEVTRQRIKAFQDALLALRQNQLPGNYPQIAQNFLYEITEIEEEVHEYLQRCPAPQNTAEKIPV* |
| Ga0126372_125892411 | 3300010360 | Tropical Forest Soil | MIQNEHELEVTRQRIKAFQDALMALRHNQLPDNYAQIAQNFLYEIKRMEAEVHDYLQRCPAPEDPGVKIPV* |
| Ga0126377_101344052 | 3300010362 | Tropical Forest Soil | VIQNEQELEVTRQRIAAFQNALLALRRNQSPSNYAQIAQNFLYEIKKMEEEVHEYLQRLPEPEHTGVA* |
| Ga0126377_113574752 | 3300010362 | Tropical Forest Soil | MLQNEHALEVTRQRIKAFQDALLALRRTSLLANYPQIVQNFLYDIRKMEADVHAYLQHCPAPENPTVKLPV* |
| Ga0126379_118264291 | 3300010366 | Tropical Forest Soil | HKVEVTRQRIQAFQDALLALRQNQLPGNYPQIAQNFLYEITKMEAEVHEYLQHCPAPDNPAEKIPI* |
| Ga0126383_101620361 | 3300010398 | Tropical Forest Soil | VIQNEQELEVTRQRITAFQDALLALRRNQSPGNYAQIAKNFLYEIKKMEEEVHEYLQRLPEPEHTAVA* |
| Ga0126383_120288352 | 3300010398 | Tropical Forest Soil | VIHNEQELEVTRKRITAFQDALLVLRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLPEPEHTAVA* |
| Ga0137391_109813392 | 3300011270 | Vadose Zone Soil | MIQNEHELEVTRQRIAAFQNALLALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLPEPEHITVA* |
| Ga0137365_107841572 | 3300012201 | Vadose Zone Soil | VIQNEQELEVTRQRITAFQDALLALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLPEPEHTAFA* |
| Ga0137374_101751305 | 3300012204 | Vadose Zone Soil | MIQNEHELEVTRQRIKAFQDALMALRHNQLPDNYAQIAQNFLYEIKRMEAEVHDYLQRCPAPEDPG |
| Ga0137381_105713302 | 3300012207 | Vadose Zone Soil | VTRQRIKALQEALMALRHNQLSENYAQIAQNFLYDIKRMEAEVHAYLQHCPAPEDSGVKIPI* |
| Ga0137381_113918392 | 3300012207 | Vadose Zone Soil | MIQNEHELEVTRQRIKAFQDALMALRHNQQPDNYAQIAQNFLYEIKRMEAEVHDYLQRCPAPEDPGVKIPV* |
| Ga0137379_107846492 | 3300012209 | Vadose Zone Soil | MIQNALELEVTRQRIAALQDALIALRRNQLPRNYTQIAKNFLHEIKKMEEEVHAYLQCFPAPEHTPTKIPV* |
| Ga0137387_111617312 | 3300012349 | Vadose Zone Soil | VIQNEQELEVTRQRITALQDALLALRRNQSPSNYTQIAKNFLYEIKKMEEEGHEYLQRLPDPEHITVA* |
| Ga0137360_101276272 | 3300012361 | Vadose Zone Soil | VIQNEQELEVTRQRIAAFQNALLALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLPEPEHITVA* |
| Ga0137361_118926131 | 3300012362 | Vadose Zone Soil | VTRQRIKAFQDALMALRHNQQPDNYAQIAQNFLYEIKRMEAEVHDYLQRCPTPEDPGVKIPL* |
| Ga0150984_1064362041 | 3300012469 | Avena Fatua Rhizosphere | VTRQRIKAFQDTLIALRRNQSPSNYAQIATNFLHEIKKMEEEVHEYLQRFPAPEYPSAKIPI* |
| Ga0137394_107290974 | 3300012922 | Vadose Zone Soil | MIQNEHELEVTRQRIKAFQDALMALRHNQLPDNYAQIAQNFLYEIKRMEAEVHDYLQRCPAPE |
| Ga0137404_104189211 | 3300012929 | Vadose Zone Soil | VMIQNEHELEVTRQRIKAFQDALMALRHNQQPDNYAQIAQNFLYEIKRMEAEVHDYLQRCPTPEDPGVKIPL* |
| Ga0137407_110086012 | 3300012930 | Vadose Zone Soil | MIQNEHELEVTRQRIKAFQDALMALRHNQQPDNYAQIAQNFLYEIKRMEAEVHDYLQRCPTPEDPGVKIPL* |
| Ga0126375_104112862 | 3300012948 | Tropical Forest Soil | MLQNEHALEVTRQRIPAFQDALLALRRTSLLGNYPHIAQNFLYDIRKMEADVHAYLQHCPAPENPAVKLPV* |
| Ga0126375_114822951 | 3300012948 | Tropical Forest Soil | MIQNEHELEVTRQRIKAFQDALMALRHNQLPDNYAQIAQNFLYEIKRMEAEVHDYLQRRPAPEDPGVKIPL* |
| Ga0134087_107393442 | 3300012977 | Grasslands Soil | MIQNEHELEVTRQRITAFQDALMVLRHNQLPDNYAQIAQNFLYEIKRMETEVHDYLQRCPAPEDPGVKIPV* |
| Ga0182033_114936272 | 3300016319 | Soil | VIQNEQELEVTRQRITAFQYALLALRRNQSPSNYAQIAKNFLYEIKKMEEEIHEYLQRLPEPEHTAVA |
| Ga0182032_100573833 | 3300016357 | Soil | MIQNEHELEVTRQRIKAFQDALLALRQNQLPGNYPQIAQNFLYEITKMEAEVHEYLQRCPAPDNPAEKIPV |
| Ga0182034_100781862 | 3300016371 | Soil | MLQNEYEFEVTRQRIKAFQDALLALRQNQLPGNYPQIAQNFLYEITKMEAEVHEYLQRCPAPDNPAEKIPV |
| Ga0184610_12435871 | 3300017997 | Groundwater Sediment | MIQNESELEVTRQRIKAFQDALIALRRNQLPSNYAQIATNFLHEIKKMEEEVHEYLQRFPAPEYPPAKIPL |
| Ga0184637_101137261 | 3300018063 | Groundwater Sediment | VIRNQQELEVTRQRIKAFQDALIALRRNQSPSNYTQIAKNFLYEIKKMEEEVHEYLQRLPEPEHTAVV |
| Ga0184633_105585971 | 3300018077 | Groundwater Sediment | VIRNQQELEVTRQRIKAFQDALIALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLPEPEHTAVV |
| Ga0184627_100615872 | 3300018079 | Groundwater Sediment | MIQNEIELEVTRQRIKAFQDALIALRRNQLPSNYAQIATNFLHEIKKMEEEVHEYLQRFPAPEYTPAKIPV |
| Ga0184627_101872383 | 3300018079 | Groundwater Sediment | VIRNQQELEVTRQRIKAFQDALIALRRNQSPSNYAQIAKNFLYEIKKIEEEVHEYLQRLPEPEHTAVV |
| Ga0184639_101221283 | 3300018082 | Groundwater Sediment | TRQRIKAFQDALIALRRNQSPSNYAQIAKNFLYEIKRMEEELHEYLQRLSEPEHNAVA |
| Ga0184639_102708041 | 3300018082 | Groundwater Sediment | VIRNEQELEVTRQRIKAFQDALIALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLPEPEHTAVV |
| Ga0184648_13140273 | 3300019249 | Groundwater Sediment | VTRQRIKAFQDALIALRRNQLPDNYAQIAQNFLYEIKKMEAEVHEYLQRYPAPENPAVKIPV |
| Ga0184648_13925522 | 3300019249 | Groundwater Sediment | ELEVTRQRIKAFQDALIALRRNQSPSNYAQIAKNFLYEIKKMEEAVHEYLQRLPEPEHTAVV |
| Ga0184646_14010882 | 3300019259 | Groundwater Sediment | MIQNESELEVTRQRIKAFQDVLIALRRNQLPSNYAQIVTNFLHEIKKMEEEVHEYLQ |
| Ga0187894_100701874 | 3300019360 | Microbial Mat On Rocks | MIQNEHELEVTRQRIKAFQDALMVLRHNQSASNYTQIAQNFLYEIKKMEAEVHEYLQRFPTPEPPAVHIPV |
| Ga0179594_101409262 | 3300020170 | Vadose Zone Soil | MIQNEHELEVTRQRIKAFQDALMALRHNQLPDNYAQIAQNFLYEIKRMEAEVHDYLQRCPAPEDPGVKIPV |
| Ga0194132_105916711 | 3300020214 | Freshwater Lake | MIRSPAELEVTRQRITAFQDALLMLRRTQSASNDAQIAKNFLYEIQQMEDEVHVYLQQCPAPEPTAIA |
| Ga0222625_13184012 | 3300022195 | Groundwater Sediment | MIQNESELEVTRQRIKAFQDALIALRRNQLPSNYAQIATNFLHEIKKMEEEVHEYLQRVPAPEYTPPKISV |
| Ga0209399_101175902 | 3300025157 | Thermal Springs | RQRIKAFQDALMALRGTQSPGNYAQIATNFLYEITKMEVEVHDYLQRCPAPENPAVKIPV |
| Ga0207684_100584602 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MIQNESELEVTRQRIKAFQDALIALRRNQLPSNYAQIATNFLHEIKKMEEEVHEYLQRFPTPEYTPAKIPL |
| Ga0207684_109582791 | 3300025910 | Corn, Switchgrass And Miscanthus Rhizosphere | MIQNEHELEVTRQRITAFQDALLALRRTQLPANYPQIAQNFLYEIQKMEAEVHAYLQHCPAPENPAVKIPV |
| Ga0209180_100420951 | 3300027846 | Vadose Zone Soil | MIQNEHELEVTRQRITAFQDALIALRHNQLPDNYAQIAQNFLYEIKRMEAEVHDYLQRCPAPEDPGVQIPV |
| Ga0209590_108638992 | 3300027882 | Vadose Zone Soil | VIQNEQELEVTRQRIAAFQNALLALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLPEPEHITVA |
| Ga0247823_113076712 | 3300028590 | Soil | VSDPPRRRTARHCGGLVVIQNEQELEVTRQRIAAFQDALLALRRNQSSSNYAQIAKNFLYEIKQMEKEVHEYLQRLPEPEHTGVA |
| Ga0307504_100274742 | 3300028792 | Soil | HGGGLVVIQNEQELEVTRQRIAAFQNALLALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLPEPEHITVA |
| Ga0247647_11630962 | 3300030570 | Soil | VVIQNEQELEVTRQRIGALQDALLALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLPEPEHTTIA |
| Ga0308206_11983962 | 3300030903 | Soil | VIQNEQELEVTRQRIAAFQNALLALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQHLPDPEHTAVA |
| Ga0308198_10681753 | 3300030904 | Soil | VIHNEQELEVTRQRIAAFQNALLALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLPEPEHITVA |
| Ga0308178_11083662 | 3300030990 | Soil | VIQNEQELEVTRQRIAAFQNALLALRRNQSPSNYAQIAKNFLYEIKKMEEEVHEYLQRLP |
| Ga0308204_102481271 | 3300031092 | Soil | MIQNESELEVTRQRIKAFQDALIALRRNQLLSNYAQIATNFLHEIKKMEEEVHEYLRQFPAPEYPPAKTPV |
| Ga0308197_103167021 | 3300031093 | Soil | MIQNESELEVTRQRIKAFQDALIALRRNQLPSNYAQIATNFLHEIKKMEEEVHEYLQRFPVPEYTPAKIPV |
| Ga0306926_115261191 | 3300031954 | Soil | VTRQRIKAFQDALLALRQNQLPGNYPQIAQNFLYEITKMEAEVHEYLQRCPAPDNPAEKIPV |
| Ga0318533_109189512 | 3300032059 | Soil | VIQNEQELEVTRQRITAFQDALLALRRNQSPSNYAQIAKNFLYEIKKMEEEIHEYLQRLPEPEHTAVA |
| Ga0247830_102547002 | 3300033551 | Soil | VIQNEQELEVTRQRIAAFQDALLALRRNQSSSNYAQIAKNFLYEIKQMEKEVHEYLQRLPEPEHTGVA |
| Ga0370545_025089_16_222 | 3300034643 | Soil | VIRNQQELEVTRQRIKAFQDALIALRRNQSPSNYAQIAKNFLYEIKKMEEAVHEYLQRLPEPEHITAA |
| Ga0370545_077218_449_637 | 3300034643 | Soil | VTRQRITAFQDALMALHHNQLPDNYAQIAQNFLYEIKRMETEVHDYLQRCPAPEDPGVKIPV |
| Ga0314802_031542_386_574 | 3300034677 | Soil | VIQNEQELEVTRQRIAAFQDALLALRRNQSSSNYAQIAKNFLYEIKQMEKEVHEYLQRLPEPE |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |