Metagenome Family F101552

Basic Information
Family ID	F101552
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	41 residues
Representative Sequence	VNATSADYGQTTFAQRLRGVFDTLAHLPARTRWSRMLHTVH
Number of Associated Samples	95
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.16 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.647 % of family members)
Environment Ontology (ENVO)	Unclassified (31.373 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.784 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.68% β-sheet: 0.00% Coil/Unstructured: 62.32%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF05170	AsmA	78.43
PF13502	AsmA_2	1.96
PF12344	UvrB	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2982	Uncharacterized conserved protein AsmA involved in outer membrane biogenesis	Cell wall/membrane/envelope biogenesis [M]	78.43

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	99.02 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.84 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.84 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.98 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.98 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_100746865	All Organisms → cellular organisms → Bacteria → Acidobacteria	1417	Open in IMG/M
3300002245\|JGIcombinedJ26739_100695700	All Organisms → cellular organisms → Bacteria → Acidobacteria	895	Open in IMG/M
3300002908\|JGI25382J43887_10233015	All Organisms → cellular organisms → Bacteria → Acidobacteria	859	Open in IMG/M
3300004091\|Ga0062387_101575543	All Organisms → cellular organisms → Bacteria → Acidobacteria	529	Open in IMG/M
3300005180\|Ga0066685_10580175	All Organisms → cellular organisms → Bacteria → Acidobacteria	772	Open in IMG/M
3300005332\|Ga0066388_100873850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1481	Open in IMG/M
3300005332\|Ga0066388_108848014	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300005921\|Ga0070766_10736953	All Organisms → cellular organisms → Bacteria → Acidobacteria	669	Open in IMG/M
3300006176\|Ga0070765_100990094	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300006904\|Ga0075424_101396641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300009038\|Ga0099829_10081900	All Organisms → cellular organisms → Bacteria → Acidobacteria	2473	Open in IMG/M
3300009088\|Ga0099830_10804774	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300009089\|Ga0099828_10493752	All Organisms → cellular organisms → Bacteria → Acidobacteria	1104	Open in IMG/M
3300009522\|Ga0116218_1237344	All Organisms → cellular organisms → Bacteria → Acidobacteria	820	Open in IMG/M
3300009545\|Ga0105237_11698747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	639	Open in IMG/M
3300009824\|Ga0116219_10758471	All Organisms → cellular organisms → Bacteria → Acidobacteria	530	Open in IMG/M
3300010048\|Ga0126373_10195992	All Organisms → cellular organisms → Bacteria → Acidobacteria	1954	Open in IMG/M
3300010320\|Ga0134109_10046151	All Organisms → cellular organisms → Bacteria → Acidobacteria	1430	Open in IMG/M
3300010339\|Ga0074046_10120970	All Organisms → cellular organisms → Bacteria → Acidobacteria	1681	Open in IMG/M
3300010360\|Ga0126372_11268704	All Organisms → cellular organisms → Bacteria → Acidobacteria	764	Open in IMG/M
3300010361\|Ga0126378_12432621	All Organisms → cellular organisms → Bacteria → Acidobacteria	598	Open in IMG/M
3300010362\|Ga0126377_12864037	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300010366\|Ga0126379_10216384	All Organisms → cellular organisms → Bacteria → Acidobacteria	1857	Open in IMG/M
3300011120\|Ga0150983_10062753	All Organisms → cellular organisms → Bacteria → Acidobacteria	572	Open in IMG/M
3300012200\|Ga0137382_10096469	All Organisms → cellular organisms → Bacteria → Acidobacteria	1944	Open in IMG/M
3300012202\|Ga0137363_10642515	All Organisms → cellular organisms → Bacteria → Acidobacteria	897	Open in IMG/M
3300012203\|Ga0137399_10084771	All Organisms → cellular organisms → Bacteria → Acidobacteria	2414	Open in IMG/M
3300012203\|Ga0137399_10520186	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300012203\|Ga0137399_11460616	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300012208\|Ga0137376_11113744	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300012361\|Ga0137360_10020836	All Organisms → cellular organisms → Bacteria	4379	Open in IMG/M
3300012582\|Ga0137358_10538506	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300012918\|Ga0137396_11078877	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300012923\|Ga0137359_10303724	All Organisms → cellular organisms → Bacteria → Acidobacteria	1421	Open in IMG/M
3300012925\|Ga0137419_11119065	All Organisms → cellular organisms → Bacteria → Acidobacteria	656	Open in IMG/M
3300012927\|Ga0137416_10178066	All Organisms → cellular organisms → Bacteria → Acidobacteria	1689	Open in IMG/M
3300012989\|Ga0164305_11723784	All Organisms → cellular organisms → Bacteria → Acidobacteria	563	Open in IMG/M
3300013832\|Ga0120132_1067155	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300014157\|Ga0134078_10215299	All Organisms → cellular organisms → Bacteria → Acidobacteria	790	Open in IMG/M
3300014969\|Ga0157376_11174886	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300015053\|Ga0137405_1424806	All Organisms → cellular organisms → Bacteria → Acidobacteria	2513	Open in IMG/M
3300015168\|Ga0167631_1034440	All Organisms → cellular organisms → Bacteria → Acidobacteria	823	Open in IMG/M
3300016319\|Ga0182033_10350202	All Organisms → cellular organisms → Bacteria → Acidobacteria	1235	Open in IMG/M
3300017943\|Ga0187819_10259991	All Organisms → cellular organisms → Bacteria → Acidobacteria	1014	Open in IMG/M
3300017943\|Ga0187819_10784165	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300017948\|Ga0187847_10707463	All Organisms → cellular organisms → Bacteria → Acidobacteria	567	Open in IMG/M
3300017961\|Ga0187778_10306092	All Organisms → cellular organisms → Bacteria → Acidobacteria	1029	Open in IMG/M
3300017961\|Ga0187778_10894599	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300018033\|Ga0187867_10268368	All Organisms → cellular organisms → Bacteria → Acidobacteria	959	Open in IMG/M
3300020140\|Ga0179590_1097256	All Organisms → cellular organisms → Bacteria → Acidobacteria	791	Open in IMG/M
3300020579\|Ga0210407_10342388	All Organisms → cellular organisms → Bacteria → Acidobacteria	1169	Open in IMG/M
3300020580\|Ga0210403_10628248	All Organisms → cellular organisms → Bacteria → Acidobacteria	865	Open in IMG/M
3300020581\|Ga0210399_10938021	All Organisms → cellular organisms → Bacteria → Acidobacteria	700	Open in IMG/M
3300021168\|Ga0210406_10470038	All Organisms → cellular organisms → Bacteria → Acidobacteria	998	Open in IMG/M
3300021171\|Ga0210405_10674862	All Organisms → cellular organisms → Bacteria → Acidobacteria	800	Open in IMG/M
3300021178\|Ga0210408_11248576	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300021181\|Ga0210388_11367164	All Organisms → cellular organisms → Bacteria → Acidobacteria	596	Open in IMG/M
3300021404\|Ga0210389_10458979	All Organisms → cellular organisms → Bacteria → Acidobacteria	1002	Open in IMG/M
3300021420\|Ga0210394_11486245	All Organisms → cellular organisms → Bacteria → Acidobacteria	573	Open in IMG/M
3300021475\|Ga0210392_10037467	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2902	Open in IMG/M
3300021478\|Ga0210402_10419108	All Organisms → cellular organisms → Bacteria → Acidobacteria	1243	Open in IMG/M
3300021479\|Ga0210410_11276565	All Organisms → cellular organisms → Bacteria → Acidobacteria	626	Open in IMG/M
3300021559\|Ga0210409_10230764	All Organisms → cellular organisms → Bacteria → Acidobacteria	1679	Open in IMG/M
3300021559\|Ga0210409_10923172	All Organisms → cellular organisms → Bacteria → Acidobacteria	747	Open in IMG/M
3300024283\|Ga0247670_1074270	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300025448\|Ga0208037_1017967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1729	Open in IMG/M
3300025910\|Ga0207684_11620481	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300025961\|Ga0207712_12065197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300026214\|Ga0209838_1016084	All Organisms → cellular organisms → Bacteria → Acidobacteria	1036	Open in IMG/M
3300026285\|Ga0209438_1193749	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300026308\|Ga0209265_1036850	All Organisms → cellular organisms → Bacteria → Acidobacteria	1513	Open in IMG/M
3300026318\|Ga0209471_1254091	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300026330\|Ga0209473_1166162	All Organisms → cellular organisms → Bacteria → Acidobacteria	878	Open in IMG/M
3300026515\|Ga0257158_1005226	All Organisms → cellular organisms → Bacteria → Acidobacteria	1804	Open in IMG/M
3300026869\|Ga0207821_1013004	All Organisms → cellular organisms → Bacteria → Acidobacteria	858	Open in IMG/M
3300026879\|Ga0207763_1009710	All Organisms → cellular organisms → Bacteria → Acidobacteria	1016	Open in IMG/M
3300027024\|Ga0207819_1012632	All Organisms → cellular organisms → Bacteria → Acidobacteria	1211	Open in IMG/M
3300027535\|Ga0209734_1007010	All Organisms → cellular organisms → Bacteria → Acidobacteria	2012	Open in IMG/M
3300027616\|Ga0209106_1044742	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300027651\|Ga0209217_1111683	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300027660\|Ga0209736_1024188	All Organisms → cellular organisms → Bacteria → Acidobacteria	1843	Open in IMG/M
3300027660\|Ga0209736_1183500	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300027775\|Ga0209177_10050842	All Organisms → cellular organisms → Bacteria → Acidobacteria	1174	Open in IMG/M
3300027846\|Ga0209180_10245128	All Organisms → cellular organisms → Bacteria → Acidobacteria	1031	Open in IMG/M
3300027854\|Ga0209517_10553805	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300027867\|Ga0209167_10192954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M
3300027889\|Ga0209380_10208751	All Organisms → cellular organisms → Bacteria → Acidobacteria	1147	Open in IMG/M
3300027911\|Ga0209698_11228391	All Organisms → cellular organisms → Bacteria → Acidobacteria	551	Open in IMG/M
3300028906\|Ga0308309_10966794	All Organisms → cellular organisms → Bacteria → Acidobacteria	738	Open in IMG/M
3300029993\|Ga0302304_10344419	All Organisms → cellular organisms → Bacteria → Acidobacteria	543	Open in IMG/M
3300031231\|Ga0170824_116844872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300031474\|Ga0170818_106261548	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300031715\|Ga0307476_10649745	All Organisms → cellular organisms → Bacteria → Acidobacteria	782	Open in IMG/M
3300031718\|Ga0307474_10927402	All Organisms → cellular organisms → Bacteria → Acidobacteria	689	Open in IMG/M
3300031823\|Ga0307478_10696653	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300031941\|Ga0310912_10277660	All Organisms → cellular organisms → Bacteria → Acidobacteria	1294	Open in IMG/M
3300031946\|Ga0310910_10376120	All Organisms → cellular organisms → Bacteria → Acidobacteria	1124	Open in IMG/M
3300031954\|Ga0306926_12604732	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300032001\|Ga0306922_10025334	All Organisms → cellular organisms → Bacteria → Acidobacteria	5973	Open in IMG/M
3300032174\|Ga0307470_10468815	All Organisms → cellular organisms → Bacteria → Acidobacteria	910	Open in IMG/M
3300032261\|Ga0306920_100828421	All Organisms → cellular organisms → Bacteria → Acidobacteria	1357	Open in IMG/M
3300032897\|Ga0335071_10094459	All Organisms → cellular organisms → Bacteria → Acidobacteria	2932	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.08%
Host-Associated	Host-Associated	3.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.22%
Aquatic	Environmental → Aquatic	6.86%
Plants	Host-Associated → Plants	3.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.24%
Freshwater	Environmental → Aquatic → Freshwater	5.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.92%
Sediment	Environmental → Aquatic → Sediment	0.98%
Peat	Environmental → Terrestrial → Peat	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	66.67%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.88%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	30.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.86%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.98%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013832	Permafrost microbial communities from Nunavut, Canada - A3_5cm_0M	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015168	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G4A, Ice margin, adjacent to proglacial lake)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300024283	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11	Environmental	Open in IMG/M
3300025448	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_100 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026214	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026515	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-A	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300026879	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 50 (SPAdes)	Environmental	Open in IMG/M
3300027024	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 42 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029993	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1007468651	3300000955	Soil	ATSGDYIGDTTFWSRLTAIFQTLAHLPSRTRWSRMLRTVH*
JGIcombinedJ26739_1006957002	3300002245	Forest Soil	YGQTSFFQRLKSVVDTLLHLPQRTRWSRMLRTVH*
JGI25382J43887_102330152	3300002908	Grasslands Soil	PFLVYWSVDATSGDYSGETTFWSRLTGIFQTLAHLPSRTRWSRMLRTVH*
Ga0062387_1015755431	3300004091	Bog Forest Soil	YWSVDATTADYAKETTFFSRLTSVFDNIRHLPARTRWGRMLHTVH*
Ga0066685_105801752	3300005180	Soil	PFLIYWSVEAKSGDYSGESTFWSRLAGVVQTLAHLPSRTRWSRMLHTVH*
Ga0066388_1008738501	3300005332	Tropical Forest Soil	WSVQATSVDYGESTFAQRLRAVLQTVAHLPARTRWSRMLHTVH*
Ga0066388_1088480141	3300005332	Tropical Forest Soil	SVEATTDDYAQSTFLQRVAGVLDTLMHLPARTRWSRMLHTVH*
Ga0070766_107369531	3300005921	Soil	SSADYSASTFFQRLAGIFDTLLHLPTRTRWSRMLHTVH*
Ga0070765_1009900942	3300006176	Soil	IYWSVDATSNDYTQTTFIQRLIGVFDTLVHLPARTRWSRMLHTVR*
Ga0075424_1013966412	3300006904	Populus Rhizosphere	ADYGESTFMQRLRGVLVTIAHLPARTRWSRMLHTVH*
Ga0099829_100819001	3300009038	Vadose Zone Soil	SVEASSADYGQSTFLQRLKSVVDTLLHLPQRTRWSRMLRTVH*
Ga0099830_108047742	3300009088	Vadose Zone Soil	SVNATSADYSSESTFWTRLSGVIDTLIHLPARTRWSRMLHTVH*
Ga0099828_104937521	3300009089	Vadose Zone Soil	SADYGQSSFLQRLKSVVDTLLHLPQRTRWSRMLRTVH*
Ga0116218_12373442	3300009522	Peatlands Soil	YNETSFGQRIIGVLDTLLHLPARTRWSRMLRTVH*
Ga0105237_116987472	3300009545	Corn Rhizosphere	SVEATSADYGESTFAQRLRAVLQTVAHLPARTRWARMLRTVH*
Ga0116219_107584712	3300009824	Peatlands Soil	YSDTSFGQRIIGILDTLLHLPARTRWSRMLHTVH*
Ga0126373_101959921	3300010048	Tropical Forest Soil	SSADYGSTTFGERIFGIFDTLSHLPARTRWNRMLHTVH*
Ga0134109_100461512	3300010320	Grasslands Soil	SDYTGESTFWSRLAGVFDTLAHLPTRTRWSRMLHTVH*
Ga0074046_101209701	3300010339	Bog Forest Soil	SSDYSETSFGQRIIGILDTLVHLPARTRWSRMLHTVH*
Ga0126372_112687041	3300010360	Tropical Forest Soil	RPLFIYWSIDATSSDYSADTSFLKRLLAVLDTIVHLPKRTRWSRMLRTVH*
Ga0126378_124326212	3300010361	Tropical Forest Soil	LIYWSVEAKSSDYSGESTFWSRLAGVFDTLAHLPTRTRWSRMIHTVH*
Ga0126377_128640372	3300010362	Tropical Forest Soil	FLIYWSVEATADDYAQNSTFFQRLAGIADTLAHLPARTRWNRMLRTVH*
Ga0126379_102163842	3300010366	Tropical Forest Soil	YSDSTFGQRIIGIFDALMHLPARTRWSRMLHTVH*
Ga0150983_100627532	3300011120	Forest Soil	LIYWSVDAKSSDYNTETTFWSRLVGVFETLAHLPTRTRWSRMLHTVH*
Ga0137382_100964692	3300012200	Vadose Zone Soil	FLIYWSVEAKSSDYSGDTTFWSRLTGILQTLVHLPSRTRWGRMLHTVH*
Ga0137363_106425151	3300012202	Vadose Zone Soil	RPFLIYWSVEAKSSDYSGDTTFWSRLTGILQTLVHLPSRTRWGRMLHTVH*
Ga0137399_100847712	3300012203	Vadose Zone Soil	VDAKSADYSGESTFWSRLSGVFETLVHLPSRTRWSRMLHTVH*
Ga0137399_105201862	3300012203	Vadose Zone Soil	WSVDATSGDYSGDSTFWSRLTGILQTLAHLPSRTRWSRMLRTVH*
Ga0137399_114606162	3300012203	Vadose Zone Soil	IYWSVDANSADYTGESTYWSRLVGVFETLVHLPSRTRWSRMLHTVH*
Ga0137376_111137442	3300012208	Vadose Zone Soil	LIYWSVEAKSSDYSGDTTFWSRLTGILQTLVHLPSRTRWGRMLHTVH*
Ga0137360_100208363	3300012361	Vadose Zone Soil	ADYGQSSFLQRLKSVIDTLLHLPQRTRWSRMLRTVH*
Ga0137358_105385062	3300012582	Vadose Zone Soil	ATSGDYSGETTFWSRLTGIFQTLAHLPSRTRWSRMLRTVH*
Ga0137396_110788772	3300012918	Vadose Zone Soil	YWSVDANSNDYSESSFGQRILAIFDTITHLPARTRWNRMLHTVH*
Ga0137359_103037242	3300012923	Vadose Zone Soil	YWSVEASSADYGQSSFFQRLKSVIDTLLHLPQRTRWGRMLRTVH*
Ga0137419_111190651	3300012925	Vadose Zone Soil	IYWSVDAKSADYSGESTFWSRLSGIFETMVHLPSRTRWSRMLHTVH*
Ga0137416_101780662	3300012927	Vadose Zone Soil	RPFLIYWSVEAKSSDYGGDTTFWSRLTGILQTLVHLPSRTRWGRMLHTVH*
Ga0164305_117237841	3300012989	Soil	VEASSSDYSPSTFFQRLAGIFETIAHLPSRTRWSRMLHTVH*
Ga0120132_10671552	3300013832	Permafrost	IYWSVDATSADYAGDSSFLQRLAGIFDTIVPLPARTRWHRMFHTVH*
Ga0134078_102152992	3300014157	Grasslands Soil	LIYWSVEAKSSDYTGESTFWSRLAGVFDTLAHLPTRTRWSRMLHTVH*
Ga0157376_111748862	3300014969	Miscanthus Rhizosphere	YGESTFGQRLRAVLQTVAHLPARTRWSRMLHTVH*
Ga0137405_14248061	3300015053	Vadose Zone Soil	HGRPVFIYWSIDASSADYAGDATFLKRLGGVLDTIIHLPQRTRWSRMLHTVH*
Ga0167631_10344402	3300015168	Glacier Forefield Soil	DATSADYTGDSTFLRRLGGILDTLVHLPARTRWKRMLHTVH*
Ga0182033_103502021	3300016319	Soil	SSDYADSTFSQRVVAVFDTLLHLPARTRWSRMLHTVH
Ga0187819_102599912	3300017943	Freshwater Sediment	SVDARSDDYAGDTTFFQRLRGVFETLGHLPSRTRWARMLHTVH
Ga0187819_107841652	3300017943	Freshwater Sediment	LIYWSIDASSADYTDNTFGQRIIGIFDTLLHLPARTRWGRMLHTVH
Ga0187847_107074631	3300017948	Peatland	SADYAKETTFWSRLSSVFDNVAHLPARTRWSRMLHTVR
Ga0187778_103060921	3300017961	Tropical Peatland	IDANSNDYSDSTFGQRLVGIFDALMHLPARTRWSRMLHTVR
Ga0187778_108945992	3300017961	Tropical Peatland	DYSDSSFAQRIVGIFDTLMHLPARTRWSRMLHTVH
Ga0187867_102683681	3300018033	Peatland	SSDYSDTSFMQRIAGVFDTLLHLPARTRWSRMLHTVH
Ga0179590_10972562	3300020140	Vadose Zone Soil	SVDANSNDYSESSFGQRILAIFDTITHLPARTRWNRMLHTVH
Ga0210407_103423881	3300020579	Soil	SVEATSSDYTGDSSFWSRLTGVFDTLMHLPSRTRWSRMLHTVH
Ga0210403_106282482	3300020580	Soil	NDYSDSSFGQRILAIFDTITHLPARTRWSRMLHTVH
Ga0210399_109380212	3300020581	Soil	NSADYGQSSFFQRLKSVIDTLLHLPQRTRWGRMLRTVH
Ga0210406_104700381	3300021168	Soil	DYNTETTFWSRLVGVFETLAHLPTRTRWSRMLHTVH
Ga0210405_106748621	3300021171	Soil	WSVEASSADYNPSTFWQRLAGVFDTLLHLPSRTRWSRMLHTVH
Ga0210408_112485762	3300021178	Soil	DYNRSTFFQRLAGIFETLAHLPTRTRWSRMLHTVH
Ga0210388_113671642	3300021181	Soil	VDATSNDYSDSSFTQRILAIFDTLTHLPARTRWNRMLHTVH
Ga0210389_104589791	3300021404	Soil	ASSADYGQSSFFQRLKSVIDTLLHLPQRTRWGRMLRTVH
Ga0210394_114862451	3300021420	Soil	ATSNDYTQTTFIQRLIGVFDTIAHLPARTRWSRMLHTVH
Ga0210392_100374673	3300021475	Soil	ATSNDYSDSSFGQRILAIFDTITHLPARTRWSRMLHTVH
Ga0210402_104191082	3300021478	Soil	DATSNDYTQTTFIQRLIGVFDTIAHLPARTRWSRMLHTVH
Ga0210410_112765651	3300021479	Soil	TSNDYTQSTFLQRLVAVFDTLTHLPARTRWSRMLHTVH
Ga0210409_102307642	3300021559	Soil	WSVDATSNDYSDSSFGERILAIFDTITHLPARTRWSRMLHTVH
Ga0210409_109231721	3300021559	Soil	SVDATSSDYNNESTFWTRLTGIFQTLAHLPSRTRWSRMLRTVH
Ga0247670_10742702	3300024283	Soil	NDYSDSSFGRRILAIFDTLTHLPARTRWNRMLHTVH
Ga0208037_10179672	3300025448	Peatland	IEADSSDYSADTSLWSRLTGMADTLVHLPTRTRWSRMFHLVH
Ga0207684_116204811	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	NSADYGQSSFPQRLKSVVDTLLHLPQRTRWSRMLRTVH
Ga0207712_120651971	3300025961	Switchgrass Rhizosphere	ATSADYGESTFAQRLRAVLQTVAHLPARTRWARMLRTVH
Ga0209838_10160841	3300026214	Soil	ADYTNDSTFWRRLGGIFDTLAHLPKRTRWKRMLHTVH
Ga0209438_11937492	3300026285	Grasslands Soil	SADYGQSSFLQRLKSVVDTLLHLPQRTRWSRMLRTVH
Ga0209265_10368501	3300026308	Soil	LIYWSVEAKSSDYSGESTFWSRLAGVFDTLAHLPKRTRWSRMLHTVH
Ga0209471_12540912	3300026318	Soil	DAQSADYSRESTYWSRLVGVLETLVHLPSRTRWSRMLHTVH
Ga0209473_11661622	3300026330	Soil	FLIYWSVEAKSNDYTGESTFWSRLVGVFDTLAHLPSRTRWSRMLHTVH
Ga0257158_10052261	3300026515	Soil	YWSVDAKSADYSGESTFWSRLSGVFETLVHLPSRTRWGRMLHTVH
Ga0207821_10130042	3300026869	Tropical Forest Soil	SDYGEASFGQRIVGIFDTLLHLPARTRWSRMLHTVH
Ga0207763_10097102	3300026879	Tropical Forest Soil	VEASSSDYGEASFGQRIVGIFDTLLHLPARTRWSRMLHTVH
Ga0207819_10126322	3300027024	Tropical Forest Soil	SSSDYGEASFGQRIVGIFDTLLHLPARTRWSRMLHTVH
Ga0209734_10070101	3300027535	Forest Soil	FLIYWSVEATGTDYGPSTFWQRLVSVFQTLAHLPQRTRWGRMLRTVH
Ga0209106_10447421	3300027616	Forest Soil	SSDYGGDTTFWSRLTGILQTLVHLPSRTRWGRMLHTVH
Ga0209217_11116832	3300027651	Forest Soil	SIEASSADYGQSSFRERLSGVIDTLAHLPARTRWGRMLHSVH
Ga0209736_10241882	3300027660	Forest Soil	WSVDANSNDYSNTSFGQRVLGIFDTLTHLPARTRWSRMLHTVH
Ga0209736_11835001	3300027660	Forest Soil	KSSDYGGDTTFWSRLTGILQTLVHLPSRTRWSRMLHTVH
Ga0209177_100508421	3300027775	Agricultural Soil	WSVEAKSSDYSGESTFWSRLAGVFDTLAHLPTRTRWSRMLHTVH
Ga0209180_102451282	3300027846	Vadose Zone Soil	SVEASSADYGQSTFLQRLKSVVDTLLHLPQRTRWSRMLRTVH
Ga0209517_105538051	3300027854	Peatlands Soil	SSDYNETSFGQRIIGILDTLLHLPARTRWSRMLRTVH
Ga0209167_101929541	3300027867	Surface Soil	VNATSADYGQSTFGERLRAVLDTIAHLPARTRWSRMLRTVH
Ga0209380_102087511	3300027889	Soil	SSADYSASTFFQRLAGIFDTLLHLPTRTRWSRMLHTVH
Ga0209698_112283912	3300027911	Watersheds	LIYWSVEATSGDYSSETSFGTRLWGVIDTLMHLPARTRWSRMLHTVH
Ga0308309_109667941	3300028906	Soil	EANSSDYAESTFGQRIVGVFDTLLHLPARTRWSRMLHTVH
Ga0302304_103444192	3300029993	Palsa	SSADYAQTTFGQRLRGIFETIAHLPSRTRWSRMLRTVH
Ga0170824_1168448722	3300031231	Forest Soil	VNATSADYGQTTFAQRLRGVFDTLAHLPARTRWSRMLHTVH
Ga0170818_1062615483	3300031474	Forest Soil	EATSADYAGDSSFFQRLAGIFDTIVHLPARTRWHRMFHTVH
Ga0307476_106497451	3300031715	Hardwood Forest Soil	SVEANSADYGQTSFFQRLKSVVDTLLHLPQRTRWSRMLRTVH
Ga0307474_109274021	3300031718	Hardwood Forest Soil	TSSDYAGDSTFWQRLVGIFDTLMHLPARTRWHRMFHTVH
Ga0307478_106966531	3300031823	Hardwood Forest Soil	EASSADYGQASFFQRLKSVIDTLLHLPQRTRWSRMLHTVH
Ga0310912_102776602	3300031941	Soil	NSNDYGDSSFSQRLVGIFDTLRHLPARTRWSRMLHTVH
Ga0310910_103761202	3300031946	Soil	SIEASSSDYGEASFGQRIVGIFDTLLHLPRRTRWSRMLHTVH
Ga0306926_126047322	3300031954	Soil	SSDYGEASFGQRIVGIFDTLLHLPGRTRWSRMLHTVH
Ga0306922_100253341	3300032001	Soil	ADYSDSTFGQRIIGIFDTLMHLPARTRWSRMLHTVH
Ga0307470_104688152	3300032174	Hardwood Forest Soil	ATSNDYSDSSFTQRILGVFDTITHLPARTRWSRMLHTVH
Ga0306920_1008284212	3300032261	Soil	DASTSDYADSTFFQRVVAIFDTLLHLPARTRWSRMLHTVH
Ga0335071_100944591	3300032897	Soil	VEANSSDYADSNFAQRIVGVFDTLAHLPSRTRWSRMLHTVH

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101552

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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