Metagenome / Metatranscriptome Family F101656

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101656
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	57 residues
Representative Sequence	VSEASFPGPGPDGEQPPPGTPARDETAGMPAGVPEDDWDGDAEMAAYIADLDAGRARIPEEW
Number of Associated Samples	63
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.41 %
% of genes near scaffold ends (potentially truncated)	89.22 %
% of genes from short scaffolds (< 2000 bps)	75.49 %
Associated GOLD sequencing projects	59
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.529 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (32.353 % of family members)
Environment Ontology (ENVO)	Unclassified (35.294 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.157 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.44% β-sheet: 0.00% Coil/Unstructured: 85.56%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF07228	SpoIIE	10.78
PF04248	NTP_transf_9	9.80
PF07681	DoxX	8.82
PF02366	PMT	3.92
PF13231	PMT_2	3.92
PF09594	GT87	2.94
PF13404	HTH_AsnC-type	2.94
PF00011	HSP20	1.96
PF04972	BON	1.96
PF00044	Gp_dh_N	1.96
PF09350	DJC28_CD	1.96
PF01648	ACPS	1.96
PF00072	Response_reg	0.98
PF12680	SnoaL_2	0.98
PF00571	CBS	0.98
PF05598	DUF772	0.98
PF01636	APH	0.98
PF00118	Cpn60_TCP1	0.98
PF02371	Transposase_20	0.98
PF14451	Ub-Mut7C	0.98
PF01175	Urocanase	0.98
PF12840	HTH_20	0.98
PF01625	PMSR	0.98
PF08240	ADH_N	0.98
PF07690	MFS_1	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2343	Uncharacterized conserved protein, DUF427 family	Function unknown [S]	9.80
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	8.82
COG4270	Uncharacterized membrane protein	Function unknown [S]	8.82
COG0057	Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase	Carbohydrate transport and metabolism [G]	1.96
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.96
COG0225	Peptide methionine sulfoxide reductase MsrA	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG0459	Chaperonin GroEL (HSP60 family)	Posttranslational modification, protein turnover, chaperones [O]	0.98
COG2987	Urocanate hydratase	Amino acid transport and metabolism [E]	0.98
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.53 %
Unclassified	root	N/A	26.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.53 %
Unclassified	root	N/A	26.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.53 %
Unclassified	root	N/A	26.47 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.59 %
Unclassified	root	N/A	26.47 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70.59 %
Unclassified	root	N/A	26.47 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	66.67 %
Unclassified	root	N/A	26.47 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	50.98 %
Unclassified	root	N/A	26.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.98 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.98 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	50.98 %
Unclassified	root	N/A	26.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	50.98 %
Unclassified	root	N/A	26.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	50.98 %
Unclassified	root	N/A	26.47 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Kutzneria	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	0.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004152\|Ga0062386_100772261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	791	Open in IMG/M
3300004152\|Ga0062386_101536472	Not Available	555	Open in IMG/M
3300005434\|Ga0070709_10022371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3696	Open in IMG/M
3300005434\|Ga0070709_10438025	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300005435\|Ga0070714_100292876	Not Available	1515	Open in IMG/M
3300005435\|Ga0070714_101267091	Not Available	719	Open in IMG/M
3300005435\|Ga0070714_101633387	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	629	Open in IMG/M
3300005435\|Ga0070714_101872285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	586	Open in IMG/M
3300005518\|Ga0070699_101324170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	661	Open in IMG/M
3300005712\|Ga0070764_10080983	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1709	Open in IMG/M
3300005712\|Ga0070764_10114827	Not Available	1452	Open in IMG/M
3300005921\|Ga0070766_10250995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1122	Open in IMG/M
3300006028\|Ga0070717_11100972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	723	Open in IMG/M
3300006175\|Ga0070712_100081753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2341	Open in IMG/M
3300006176\|Ga0070765_100435805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1226	Open in IMG/M
3300006176\|Ga0070765_100524893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1114	Open in IMG/M
3300010048\|Ga0126373_11699925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	695	Open in IMG/M
3300011404\|Ga0153951_1092567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	560	Open in IMG/M
3300017937\|Ga0187809_10080328	Not Available	1076	Open in IMG/M
3300017937\|Ga0187809_10242847	Not Available	650	Open in IMG/M
3300017937\|Ga0187809_10356023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	550	Open in IMG/M
3300017942\|Ga0187808_10082177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1390	Open in IMG/M
3300017942\|Ga0187808_10190220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	911	Open in IMG/M
3300020580\|Ga0210403_10725245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	795	Open in IMG/M
3300020581\|Ga0210399_11124211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	627	Open in IMG/M
3300020583\|Ga0210401_10591915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	971	Open in IMG/M
3300021171\|Ga0210405_10268192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1350	Open in IMG/M
3300021181\|Ga0210388_11652893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	531	Open in IMG/M
3300021401\|Ga0210393_11478941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	541	Open in IMG/M
3300021402\|Ga0210385_10167490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1581	Open in IMG/M
3300021402\|Ga0210385_10811483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	718	Open in IMG/M
3300021402\|Ga0210385_11195209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	583	Open in IMG/M
3300021403\|Ga0210397_10132777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1721	Open in IMG/M
3300021404\|Ga0210389_10738366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	770	Open in IMG/M
3300021405\|Ga0210387_10255635	Not Available	1533	Open in IMG/M
3300021405\|Ga0210387_10305776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1399	Open in IMG/M
3300021405\|Ga0210387_10763433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	855	Open in IMG/M
3300021406\|Ga0210386_11054550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	691	Open in IMG/M
3300021406\|Ga0210386_11204580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	640	Open in IMG/M
3300021407\|Ga0210383_10250682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1519	Open in IMG/M
3300021407\|Ga0210383_10300119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1381	Open in IMG/M
3300021407\|Ga0210383_11233077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	627	Open in IMG/M
3300021407\|Ga0210383_11440935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	571	Open in IMG/M
3300021420\|Ga0210394_10334714	Not Available	1330	Open in IMG/M
3300021420\|Ga0210394_10346651	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300021432\|Ga0210384_10339672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1353	Open in IMG/M
3300021433\|Ga0210391_10573488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	886	Open in IMG/M
3300021475\|Ga0210392_10874990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	672	Open in IMG/M
3300021477\|Ga0210398_10758956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	783	Open in IMG/M
3300021560\|Ga0126371_13806167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	509	Open in IMG/M
3300022533\|Ga0242662_10193936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	636	Open in IMG/M
3300025906\|Ga0207699_10526991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	855	Open in IMG/M
3300025915\|Ga0207693_10148699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1842	Open in IMG/M
3300025915\|Ga0207693_11190353	Not Available	575	Open in IMG/M
3300025916\|Ga0207663_10096189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1977	Open in IMG/M
3300025916\|Ga0207663_10183167	Not Available	1497	Open in IMG/M
3300025922\|Ga0207646_10685734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	917	Open in IMG/M
3300025928\|Ga0207700_10117291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2152	Open in IMG/M
3300025929\|Ga0207664_10865223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	812	Open in IMG/M
3300027855\|Ga0209693_10005035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	6039	Open in IMG/M
3300027855\|Ga0209693_10030664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2619	Open in IMG/M
3300027889\|Ga0209380_10009127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	5829	Open in IMG/M
3300027889\|Ga0209380_10104252	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1640	Open in IMG/M
3300027908\|Ga0209006_10212570	Not Available	1676	Open in IMG/M
3300030862\|Ga0265753_1003864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Kutzneria	1596	Open in IMG/M
3300031544\|Ga0318534_10837102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	516	Open in IMG/M
3300031715\|Ga0307476_10816747	Not Available	689	Open in IMG/M
3300031715\|Ga0307476_11283880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	535	Open in IMG/M
3300031715\|Ga0307476_11312365	Not Available	528	Open in IMG/M
3300031718\|Ga0307474_11181055	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	605	Open in IMG/M
3300031718\|Ga0307474_11523121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	526	Open in IMG/M
3300031782\|Ga0318552_10307899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	806	Open in IMG/M
3300031798\|Ga0318523_10117995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1310	Open in IMG/M
3300031823\|Ga0307478_10075424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2560	Open in IMG/M
3300031846\|Ga0318512_10743635	Not Available	504	Open in IMG/M
3300032063\|Ga0318504_10045727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1817	Open in IMG/M
3300032805\|Ga0335078_10154395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3244	Open in IMG/M
3300032805\|Ga0335078_10816315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1134	Open in IMG/M
3300032828\|Ga0335080_10514029	Not Available	1270	Open in IMG/M
3300032895\|Ga0335074_10112895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3545	Open in IMG/M
3300032896\|Ga0335075_10071642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4691	Open in IMG/M
3300032896\|Ga0335075_11139637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	683	Open in IMG/M
3300032897\|Ga0335071_10099811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2848	Open in IMG/M
3300032898\|Ga0335072_10008862	All Organisms → cellular organisms → Bacteria	14555	Open in IMG/M
3300032898\|Ga0335072_10082893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4159	Open in IMG/M
3300032898\|Ga0335072_10559722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1163	Open in IMG/M
3300032955\|Ga0335076_10782603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	836	Open in IMG/M
3300033134\|Ga0335073_10018734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9658	Open in IMG/M
3300033134\|Ga0335073_11918580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	546	Open in IMG/M
3300033134\|Ga0335073_11924061	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	545	Open in IMG/M
3300033158\|Ga0335077_12134318	Not Available	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.02%
Host-Associated	Host-Associated	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.22%
Aquatic	Environmental → Aquatic	9.80%
Fungi	Host-Associated → Fungi	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.22%
Freshwater	Environmental → Aquatic → Freshwater	9.80%
Mycelium	Host-Associated → Fungi → Mycelium	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.18%
Loam	Environmental → Terrestrial → Soil → Loam	28.43%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	19.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.80%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	38.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	19.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.78%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.96%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	32.35%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	19.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.75%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	9.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	4.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.98%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300030862	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062386_1007722612	3300004152	Bog Forest Soil	VPEVSFPGPGSDGEQPPPGGPARDETAGAPAGVPEDDWDGDAEMAAYIADLDAGRA
Ga0062386_1015364721	3300004152	Bog Forest Soil	VSEASFPGPGPDGEQPLPGTPARDETAGMPAGVPEDDWDGDAEMAAYI
Ga0070709_100223711	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VSEDSFPGPGSDGEQPPPGGPARDDDWDGDAEMAAYIADLEAGRARIPEEWEIEGPAAT
Ga0070709_104380251	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VSEVSFPGPGPDGEQPPPGAQARDEASGMPAGVPEDDWDGDAEMAAYIADLEAG
Ga0070714_1002928763	3300005435	Agricultural Soil	VSEASFPGPGPDGEQPPPGDPARDEVAGMPAGVPADDWDGDAEMAAYIADLDAGRARIPEEWEVEGPA
Ga0070714_1012670912	3300005435	Agricultural Soil	VSEALFPGPGPDGEQPPPGAPARDEVAGMPGWVPEDDWDGDAEMA
Ga0070714_1016333871	3300005435	Agricultural Soil	VSQTSFPGPGPDGEPPPVDPARDDDWDGDAEMASYIADLDAGRA
Ga0070714_1018722852	3300005435	Agricultural Soil	MSEVSFPGPGPDGEQPLPGGPARDETAGMPGGVPADDWDGDAEMA
Ga0070699_1007549481	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MSEVSFPGPGPDGEQPPPGDPARDETAGMPGGVPADDWDGDAEM
Ga0070699_1013241702	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VSEASFPGPGPDGEQPPPGGPARDETAGMPGGVPADDWDGDAEMASYIADLDA
Ga0070762_100967202	3300005602	Soil	MHSNTNVELAVSQDSFPGPGPDGEQPPPGDPARDDDWDGDAEM
Ga0070764_100809831	3300005712	Soil	VSKASFPGPGSDGEQPPPGGPARDETAGVPADDWDGDAEMASYI
Ga0070764_101148274	3300005712	Soil	VSEASFPGPGPDGEQPPPGDPVRDETVGEPAGVPEDDWDGDAEMASYIADLDAGRARI
Ga0070766_102509951	3300005921	Soil	VSQTSFPGPGPDGEQPPPGDPARDDDWDGDAEMAAYIADLDAG
Ga0070717_111009722	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VSEISFPGAGPDGEQPPPGDPARDEVAGIPAGVPEDDWDGDAEMAAYIADLDAGRARIP
Ga0070712_1000817531	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VSEASFPGPGPDGEQPPPVGPARDEAAGMPAGVPEDDWDGDAEMAAYIADLEAGRARIPEEWEIEGPAA
Ga0070765_1004358051	3300006176	Soil	VSQTSFPDPGPDGEQPPPGNPARDDDWDGDAEMAAY
Ga0070765_1005248932	3300006176	Soil	VSQTSFPGPGSDGEQPPPGTPARDETAGVPEDDWDGDAEMAAYIADLDAGRARI
Ga0126373_116999251	3300010048	Tropical Forest Soil	VSEASFPGPGPDGEQPPPGAPARDETADAPAGMPEDDWDGDAEMASFIADL
Ga0153951_10925672	3300011404	Attine Ant Fungus Gardens	MNFSANTELEVSEVSFPGPGPDGEQPLPGDPARDEAAGAPGGVPGDDWDGDAEMAAYIADLDAGRARIPEEWEVEGPAATIGLG
Ga0187812_10027001	3300017821	Freshwater Sediment	MSEVSFPGDGQDGEQPPPAGPARDEAAAVPVDDWDPDAEMASFIAGVEAGRVRVPEQWELECQGASISLG
Ga0187807_10629711	3300017926	Freshwater Sediment	MSEVSFPGDGQDGEQPPPAGPARDEAAAVPVDDWDPDAEMASFIAGVEAGRVRVPEQWELECQGASIS
Ga0187809_100803281	3300017937	Freshwater Sediment	VSEASFPGPGPDGEQPPPGTPARDETAGMPAGVPEDDWDGDAEMAAYIADLDAGRARIPEEW
Ga0187809_102428471	3300017937	Freshwater Sediment	VSEASFPGPGPDGEQPLPGDPARDEAAGMPAGLPADDWDGDAEMAAYIADLDAGRARIPEEW
Ga0187809_103560232	3300017937	Freshwater Sediment	VSQDSFPGPGPDGEQPPSGGPARDDDWDGDAEMAAYIADLDAGRARI
Ga0187808_100821772	3300017942	Freshwater Sediment	VSQVSFPGPGSDGEQPPPGGPARDEVAGIPGGVPEDDWDGDAEMAAYIADLDA
Ga0187808_101902201	3300017942	Freshwater Sediment	VSEASFPGPGPDGEQPPPGDPARDEVAGMPAGVPEDDWDGDAEMAAYIADLDAGRARIPEEWEIEGPAATISLGD
Ga0187805_100394491	3300018007	Freshwater Sediment	MSEVSFPGDGQDGEQPPPAGPARDEAAAVPVDDWDPDAEMASFIAGVEAGRVRVPEQWELEC
Ga0210403_107252451	3300020580	Soil	VSEASFPGPGPDGEQPPPVGPARDDDWDGDAEMAAYI
Ga0210399_111242112	3300020581	Soil	VSQDSFPGPGPDGEQPPPAGPARDDDWDGDAEMASYIADLDAGRARIPEEWEV
Ga0210401_105919151	3300020583	Soil	VSEISFPSPGPDGEQPSPEDPARDEVAGMPAGVPEDDWDGDAEMAAYIADLDAGRARIPEEWEIEGPA
Ga0210405_102681921	3300021171	Soil	VSEASFPGPGSDGEQPPPGTPARDDDWDGDAEMASYIADLDAGRARIPEEWEIEGPAATISLGDA
Ga0210388_116528932	3300021181	Soil	VSEVSFPGPGPDGEQPPPVGPARDETAGVPVDDWDGDAEMAAYIADLDAGRARIPEEWEVEGPAATIGLGDAADVDLAEL
Ga0210393_114789412	3300021401	Soil	VSEVSFPGPGPDGEQAPSGDPVRDEASGAAAGVPEDDWDGDAEMASYIAD
Ga0210385_100299625	3300021402	Soil	MSEVSFPGDGQGGEEPLPGLPARDEAAGAAPAGPEDDWDPDAEMAAFFADLEA
Ga0210385_101674901	3300021402	Soil	VSEASFPGPGSDGEQPPPGTPARDETAGVPEDDWDGDAEMAAYIADLDAGRARIPEEWEVEGPAATF
Ga0210385_108114832	3300021402	Soil	VSEVSFPGPGPDGEQAPPGDPVRDEASGAPAGVPEDDWDGDAEMAAYIADLDAGRARIPEEWEIE
Ga0210385_111952091	3300021402	Soil	VSQDSFPGPGPDGEQPPPAGPARDDDWDGDAEMAAY
Ga0210397_101327774	3300021403	Soil	VSEVSFPGPGSDGEQPPPVGPARDDDWDGDAEMAAYIADLDAGRARIPEEWEVEGPAA
Ga0210389_107383661	3300021404	Soil	VSEVSFPGPGPDGEQPPPVGPARDETVGEPAGVPVDDWDGDAEMAAYIADLDAGRARIPE
Ga0210387_102556351	3300021405	Soil	VSEASFPGPGPDGEQPPPGDPVRDETVGEPAGVPEDDWDGDAEMASYIADLDAGRA
Ga0210387_103057761	3300021405	Soil	VSEISFPGPGPDGEQPPPGGPARDETVGEPAGVPVDDWDGDAEMAAYIADLD
Ga0210387_107634331	3300021405	Soil	VSQTSFPGPGSDGEQPPPGGPARDDDWDGDAEMASYIADLDAGRARIPEEWEVEGPAAT
Ga0210386_110545502	3300021406	Soil	VSEVSFPGPGPDGEQPPPGGPARDDDWDGDAEMAAYIA
Ga0210386_112045802	3300021406	Soil	VSEVSFPGPGPDGEQPPPVGPARDETAGEPAGVPVDDWDGDAEMAAYIADLDAGRARIPEEWEVEGPAATIGLG
Ga0210383_102506823	3300021407	Soil	VSEVSFPGPGPDGEQPPPGGPARDDDWDGDAEMASYIADLDAGRA
Ga0210383_103001191	3300021407	Soil	VSEASFPGPGPDGEQPPPGGPARDETAGEPAGVPVDDWDGDAEMAAYIADL
Ga0210383_112330771	3300021407	Soil	VSEVSFPGPGPDGEQPPPVGPARDETVGEPAGVPVDDWDGDAEMAAYIADLEAGRARI
Ga0210383_114409351	3300021407	Soil	VSQDSFPGPGPDGEQPPPAGPARDDDWDGDAEMASYIADLDAGRARIPEEWEVEGPAATISLG
Ga0210394_103347141	3300021420	Soil	VSETSFPGPGPDGEQPQPGDPARDEAAGAGAPGGVPADDWDGDAEMAAYIADLDAGRARIPEEWEVEGP
Ga0210394_103466513	3300021420	Soil	VSEVSFPGPGPDGEQPPPVGPARDETAGEPAGVPEDDWDGDAEMAAYIADLDAGRARIPEEWEVEGPA
Ga0210384_103396721	3300021432	Soil	VSEASFPGPGPDGEQPPPGTPARDETAGEPEDDWDGDAEMAAYIADLDAGRARIPEEWEVEGPAATFGLGD
Ga0210391_105734882	3300021433	Soil	VSEVSFPGPGPDGEQPPPAGPARDDDWDGDEEMAAYIA
Ga0210392_108749902	3300021475	Soil	VSQDSFPGPGPDGEQPPPAGPARDDDWDGDAEMASYIADLDAGRARIPEEWEIEGP
Ga0210398_107589561	3300021477	Soil	VSEVSFPGPGPDGEQPPPVGPARDDDWDGDAEMAAYIADLDAGRARIPEEWEVEG
Ga0126371_138061671	3300021560	Tropical Forest Soil	VSEASFPAPGPDGKQPPPGDPARDDDWDGDAEMAAYIADLDAGRARIPEEWEIEGPAATI
Ga0242662_101939361	3300022533	Soil	ASFPGPGPDGEQPPPSGPARDEVAGGPGMPAGVPEDDWDGDAEMAAYIADLDAGRVRGRAILVP
Ga0207699_105269911	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	VSEVSFPGPGPDGEQPPPGAQARDEASGMPAGVPEDDWDGDAEMAAYIADLEAGRARI
Ga0207693_101486991	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VSQDSFPDPGSDGEQPPPGGPARDDDWDGDAEMAAYIADLEAGRVRIPEEWEIEGPAATIGLGDAADVDLAELAV
Ga0207693_111903531	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VSEASFPGPGPDGEQLPPGDPARDEAAGGPAGVPADDWDGDAEMAAYIADLDAG
Ga0207663_100961893	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VSQDSFPGPGPDGEQPPPGGPARDDDWDGDAEMAAYIA
Ga0207663_101831671	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VSEASFPGPGPDGEQPPPGDPARDETADVPAGVPEDDWDGDAEMAAYIADLDAGRARIPEEWEIEGPAATISLGDAADV
Ga0207646_106857343	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VPEVSFPGPGPDGEQPPPGGPARDETAGMPAGVPADDWDGDAEMAAYIADLDAGRAR
Ga0207700_101172912	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VSEASFPGPGSDGEQPPPGGPARDEAAGGPAGVPADDWDGDAEMAAYIADLDAGRARIPEEWEVEGPAATIGL
Ga0207664_108652232	3300025929	Agricultural Soil	VSEASFPGPGPDGEQPPPGAQARDEVTGMPAGVPEDDWDGDAEMAAYIADLEAGRARIPEEW
Ga0209693_100050356	3300027855	Soil	VSEASFPGPGSDGEQPPPGTPARDETVGEPAGVPEDDWDGDAEMAAY
Ga0209693_100306642	3300027855	Soil	VSEASFPGPGPDGEQPPPGDPVRDETVGEPAGVPEDDWDGDAEMAAYIAD
Ga0209380_100091275	3300027889	Soil	VSQDSFPGPGSDGEQPPPGTPARDDDWDGDAEMASYIADLDAGRARIPEEWEVEGPAATISLGDAADVDLTELAAMV
Ga0209380_101042521	3300027889	Soil	VSEASFPGPGPDGEQPPPVGPARDDDWDGDAEMAAYIADLDAGRARIPEEWEVEGPAATF
Ga0209006_102125703	3300027908	Forest Soil	MSEASFPGPGPDGEQPPPGDPARDETAGEPAGVPEDDWDGDAEMAAY
Ga0265753_10038643	3300030862	Soil	MSEASFPGPGPDGEQPPPGDPARDETVGEPAGVPEDDWDGDAEMA
Ga0318534_108371021	3300031544	Soil	MECHPNGVAYVSEISFPGAGPDGEQPPRPGGPARDETAGAAAGVPEDDWDGDAEMASYIADLEAGRARIPE
Ga0307476_108167471	3300031715	Hardwood Forest Soil	VSEASFPGPGPDGEQPPPGIPARDETTGMPAGVPEDDWDGDAEMAAYIADLDAGRARIPEEWEIE
Ga0307476_112838802	3300031715	Hardwood Forest Soil	VSQDSFPGPGPDGEQPPPGGPARDDDWDGDAEMASYIA
Ga0307476_113123651	3300031715	Hardwood Forest Soil	MIIRMGAAVSEASFPGPGSDGQQPPPGGPARDEVAGMPAGVPEDDWDGDAEMASYIADLEAGRARIPEEWEVEGPAATISLGDAA
Ga0307474_111810551	3300031718	Hardwood Forest Soil	VSEISFPGPGPDGEQPPPGDPARDETAGAPTGVPEDDWDGDAEMAAYIADLDAG
Ga0307474_115231211	3300031718	Hardwood Forest Soil	VSQDSFPGPGPDGEQPPPGGPARDDDWDGDAEMASYIADLDAGRARIPEEWEVEGPAATIGLGDAADV
Ga0318552_103078992	3300031782	Soil	MECNPNGVAYVSEISFPGAGPDGEQPPRPGDPARDEAAGVPEDDWDGDAEMAAYIADLDAGRARIPEEWEIEGPAATISL
Ga0318523_101179951	3300031798	Soil	VEQHPFPGPERGGEQPPRPGGPARDDDWDGDAEMAA
Ga0307478_100754241	3300031823	Hardwood Forest Soil	VSQTSFPGPGSDGEQPPPGTPARDDDWDGDAEMASY
Ga0318512_107436352	3300031846	Soil	VSPASFPGPGPDGEQPPPGGPARDDDWDGDAEMAAYIADLDAGRVRIPEEW
Ga0318504_100457272	3300032063	Soil	VDQHPFPGPERGGEQPPRPGGPARDETAGGPAGVPEDDWDGDAAMAAYFADLDA
Ga0335078_101543951	3300032805	Soil	VSEVSFPGPGPDGEQPPPVDPARDETAGLPAGVPEDDWDGDAEMAAYIADLDAGRARIPE
Ga0335078_108163153	3300032805	Soil	VSEASFPGPGPDGEQPRPAGPARDETAGLPPGAPEDDWDGDAAIAAYIADLEAGRARIPEEWEVEGPAATISLGD
Ga0335080_105140291	3300032828	Soil	VSEVSFPGPGPDGEQPPPVDPARDETAGLPAGVPEDDWDGDAEMAAYIA
Ga0335074_101128951	3300032895	Soil	VSEASFPGPGPDGEQPPPGDPARDEAGGAPGGVPEDDWDGDAAMASYFADLDAGRARIPEEWEIEGPAATISL
Ga0335074_102493274	3300032895	Soil	MPEVSFPGDGQDGEEPPPGEPARDETGDDGPEGPVSVPGDDWDPDAEMAAYVADLDAGRARVPEEWEIEG
Ga0335074_114098121	3300032895	Soil	MSEVSFPGDGQDGEQPPPGDPARDETPAMPADDDWDADADMARYIADLDAGRRRIPEDWE
Ga0335075_100716421	3300032896	Soil	VSESSFPGAGPDGGQPPLPGVPARGEDDWDGDAELAAYVADLAAGRARIPEEWEVEGPAATISLG
Ga0335075_111396371	3300032896	Soil	MSEISFPDPGPDGEQPPRPGEPTRDDDWDGDAAMAAYFADLDAGRAR
Ga0335075_116753651	3300032896	Soil	MSEVSFPGDGQDGEEPPPGEPARDEAGDGRAEGPAGTPEDDWDPDAEMAAYIADVDAGRARIPEEWEIEG
Ga0335071_100998111	3300032897	Soil	VSAASFPGPGPDGEQPPRPGGPARDDDWDGDAEIAAYIADLE
Ga0335072_1000886216	3300032898	Soil	VSEASFPGPGPDGEQPPPGDPARDEAGGAPGGVPEDDWDGDAAMAAYFADLDAGRARIPEEWEIEGPAATIGLGDAADV
Ga0335072_100828931	3300032898	Soil	MSQASFPGPGPDGDQPPPGGPARDEDDWDGDAEMASYIADLQAGRARIPEEWEIEGP
Ga0335072_105597221	3300032898	Soil	MSEAPFPGPGPDGDQPPPGGPARDEDDWDGDAEMASYIADLAAGRARIPEEWEIEGPAATISLGDAADV
Ga0335072_108913691	3300032898	Soil	MSEVSFPGDGQDGEQPPPGDPARDETPAMPADDDWDADADMARYIADLDAGRRRIPEEWELESR
Ga0335072_113842542	3300032898	Soil	MSEVSFPGDGQDGEQPPPGDPARDETPAVPADDDWDADADMAAYIADLDAGRRRIPEEWEIESRPPVTISLGDAA
Ga0335076_107826031	3300032955	Soil	VSQASFPGPGPDGEQPPPGTPARDEDDWDGDAEMA
Ga0335073_1001873411	3300033134	Soil	VSEASFPGPGPDGEQPPPGTPARDEDDWDGDAEMAAYIADLEAGRARIPEE
Ga0335073_119185802	3300033134	Soil	MSEVSFPGDGQDGEQPPPGDPARDETPAMPADDDWDADADMARYIADLDAGRRR
Ga0335073_119240611	3300033134	Soil	VSEVLFPGPGSDGEEPLPGDPARDETPAMAADDDWDGDADM
Ga0335077_121343182	3300033158	Soil	VSAASFPGPGPDGEQPPPGGPARDETADGPAGAAGVPEDDWDGDAAIAAYIADLEAGRARIP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101656

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences