Metagenome Family F101681

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101681
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	60 residues
Representative Sequence	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLGEKP
Number of Associated Samples	85
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	86.27 %
% of genes near scaffold ends (potentially truncated)	96.08 %
% of genes from short scaffolds (< 2000 bps)	74.51 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.275 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog (28.431 % of family members)
Environment Ontology (ENVO)	Unclassified (31.373 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.18% β-sheet: 9.41% Coil/Unstructured: 69.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF08241	Methyltransf_11	50.00
PF13480	Acetyltransf_6	15.69
PF14667	Polysacc_synt_C	13.73
PF01757	Acyl_transf_3	2.94
PF02388	FemAB	0.98
PF05050	Methyltransf_21	0.98
PF00884	Sulfatase	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2348	Lipid II:glycine glycyltransferase (Peptidoglycan interpeptide bridge formation enzyme)	Cell wall/membrane/envelope biogenesis [M]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.27 %
Unclassified	root	N/A	13.73 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.27 %
Unclassified	root	N/A	13.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.27 %
Unclassified	root	N/A	13.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	71.57 %
Unclassified	root	N/A	13.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.86 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	71.57 %
Unclassified	root	N/A	13.73 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	4.90 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.57 %
Unclassified	root	N/A	13.73 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	4.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001154\|JGI12636J13339_1004809	All Organisms → cellular organisms → Bacteria	2211	Open in IMG/M
3300001593\|JGI12635J15846_10112383	All Organisms → cellular organisms → Bacteria	1936	Open in IMG/M
3300002914\|JGI25617J43924_10070019	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300003505\|JGIcombinedJ51221_10145909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300004082\|Ga0062384_101065195	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300004092\|Ga0062389_102188796	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300006059\|Ga0075017_100194910	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300006162\|Ga0075030_100214849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1546	Open in IMG/M
3300006174\|Ga0075014_100380081	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300007255\|Ga0099791_10204813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300009143\|Ga0099792_11092494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300009547\|Ga0116136_1011750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3159	Open in IMG/M
3300009623\|Ga0116133_1013310	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2038	Open in IMG/M
3300009623\|Ga0116133_1165765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300009643\|Ga0116110_1068390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1244	Open in IMG/M
3300010339\|Ga0074046_10043820	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2996	Open in IMG/M
3300010379\|Ga0136449_100984677	Not Available	1360	Open in IMG/M
3300012202\|Ga0137363_11404971	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300012203\|Ga0137399_10067697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2667	Open in IMG/M
3300012685\|Ga0137397_10809222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300012917\|Ga0137395_10295975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1146	Open in IMG/M
3300012923\|Ga0137359_11518766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300014152\|Ga0181533_1223560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	714	Open in IMG/M
3300014162\|Ga0181538_10271528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300014491\|Ga0182014_10036434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3655	Open in IMG/M
3300014491\|Ga0182014_10109596	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1640	Open in IMG/M
3300014491\|Ga0182014_10329529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300014492\|Ga0182013_10134203	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1592	Open in IMG/M
3300015241\|Ga0137418_10249476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1507	Open in IMG/M
3300017823\|Ga0187818_10132147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1084	Open in IMG/M
3300017959\|Ga0187779_11083390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300017975\|Ga0187782_10147718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1748	Open in IMG/M
3300017988\|Ga0181520_10511645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300018019\|Ga0187874_10214530	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300018034\|Ga0187863_10006144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	8264	Open in IMG/M
3300018046\|Ga0187851_10043048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2990	Open in IMG/M
3300018046\|Ga0187851_10117282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1638	Open in IMG/M
3300018046\|Ga0187851_10127082	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1561	Open in IMG/M
3300019787\|Ga0182031_1000915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1155	Open in IMG/M
3300019787\|Ga0182031_1086488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2374	Open in IMG/M
3300019787\|Ga0182031_1173134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2281	Open in IMG/M
3300019787\|Ga0182031_1316920	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1567	Open in IMG/M
3300021406\|Ga0210386_11448042	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300021407\|Ga0210383_11373435	Not Available	588	Open in IMG/M
3300021474\|Ga0210390_10288146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1391	Open in IMG/M
3300021477\|Ga0210398_10279047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1362	Open in IMG/M
3300023101\|Ga0224557_1019947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3639	Open in IMG/M
3300023101\|Ga0224557_1063706	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1636	Open in IMG/M
3300024295\|Ga0224556_1107160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300024295\|Ga0224556_1139986	Not Available	592	Open in IMG/M
3300024295\|Ga0224556_1167984	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300025442\|Ga0208034_1049277	Not Available	883	Open in IMG/M
3300025922\|Ga0207646_10489094	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300026376\|Ga0257167_1017960	Not Available	998	Open in IMG/M
3300026456\|Ga0255351_1046629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300026499\|Ga0257181_1015094	Not Available	1090	Open in IMG/M
3300026557\|Ga0179587_10301824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300026557\|Ga0179587_10756389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300027634\|Ga0209905_1069186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300027643\|Ga0209076_1115903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300027889\|Ga0209380_10099427	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1680	Open in IMG/M
3300027894\|Ga0209068_10140862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1299	Open in IMG/M
3300027911\|Ga0209698_11408486	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300028552\|Ga0302149_1004697	All Organisms → cellular organisms → Bacteria	3801	Open in IMG/M
3300028552\|Ga0302149_1120017	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	680	Open in IMG/M
3300028673\|Ga0257175_1001062	Not Available	2825	Open in IMG/M
3300028748\|Ga0302156_10079655	Not Available	1698	Open in IMG/M
3300028762\|Ga0302202_10342135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300028788\|Ga0302189_10163728	Not Available	952	Open in IMG/M
3300028854\|Ga0302268_1142845	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300028859\|Ga0302265_1165049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300028866\|Ga0302278_10052677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2519	Open in IMG/M
3300028866\|Ga0302278_10078242	Not Available	1915	Open in IMG/M
3300028873\|Ga0302197_10301657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	722	Open in IMG/M
3300028882\|Ga0302154_10349903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300029908\|Ga0311341_10432922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300029914\|Ga0311359_10150684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2135	Open in IMG/M
3300029915\|Ga0311358_10339005	Not Available	1250	Open in IMG/M
3300029915\|Ga0311358_10664652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300029917\|Ga0311326_10342071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300029939\|Ga0311328_10300438	Not Available	1189	Open in IMG/M
3300029953\|Ga0311343_10135465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2720	Open in IMG/M
3300029954\|Ga0311331_10083141	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4195	Open in IMG/M
3300029982\|Ga0302277_1220137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300029989\|Ga0311365_10092966	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2576	Open in IMG/M
3300029992\|Ga0302276_10020687	All Organisms → cellular organisms → Bacteria → Proteobacteria	4659	Open in IMG/M
3300029992\|Ga0302276_10388328	Not Available	579	Open in IMG/M
3300030002\|Ga0311350_10380790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1263	Open in IMG/M
3300030003\|Ga0302172_10200814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300030011\|Ga0302270_10525048	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300030041\|Ga0302274_10280162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300030045\|Ga0302282_1023962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3169	Open in IMG/M
3300030049\|Ga0302191_10031022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2521	Open in IMG/M
3300030507\|Ga0302192_10193660	Not Available	881	Open in IMG/M
3300030518\|Ga0302275_10046989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3275	Open in IMG/M
3300031258\|Ga0302318_10008719	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2941	Open in IMG/M
3300031261\|Ga0302140_10061988	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3993	Open in IMG/M
3300032892\|Ga0335081_12566163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300033822\|Ga0334828_015237	All Organisms → cellular organisms → Bacteria	2522	Open in IMG/M
3300033822\|Ga0334828_081440	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300033824\|Ga0334840_006719	All Organisms → cellular organisms → Bacteria → Proteobacteria	4585	Open in IMG/M
3300034065\|Ga0334827_071665	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	79.41%
Aquatic	Environmental → Aquatic	20.59%

Habitat	Taxonomy	Distribution
Peat	Environmental → Terrestrial → Peat	42.16%
Soil	Environmental → Terrestrial → Soil	37.25%
Freshwater	Environmental → Aquatic → Freshwater	15.69%
Sediment	Environmental → Aquatic → Sediment	4.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified	42.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	19.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.90%
Loam	Environmental → Terrestrial → Soil → Loam	4.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	42.16%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	11.76%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	9.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	8.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.86%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.92%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.98%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	28.43%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.78%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	9.80%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.86%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	4.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.90%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.92%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.94%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.96%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.98%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.98%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001154	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014162	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025442	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026376	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-B	Environmental	Open in IMG/M
3300026456	Peat soil microbial communities from Stordalen Mire, Sweden - H.B.S.T-25.r2	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027634	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812S1M	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028552	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N1_1	Environmental	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300028748	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_2	Environmental	Open in IMG/M
3300028762	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_3	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028854	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_1	Environmental	Open in IMG/M
3300028859	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_1	Environmental	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300028882	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N2_3	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300029992	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_3	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030003	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N2_3	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030041	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_1	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030049	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_1	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300033824	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S2 5-9	Environmental	Open in IMG/M
3300034065	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 1-5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12636J13339_10048091	3300001154	Forest Soil	MIARLRNALWRAKKSSTRPAIRFDRPIVLFQSDDWGRAGVRDREGWEELRAAGLNL
JGI12635J15846_101123831	3300001593	Forest Soil	MIARLRNALWRAKKSSTRPAIRFDRPIVLFQSDDWGRAGVRDREGWEELRAAG
JGI25617J43924_100700192	3300002914	Grasslands Soil	MIARLRNALWRAKKSSTRPAVRFDRPIALFQSDDWGRAGVRDREGWDELRAAGLNLGENLYDFYSLETAEDLHAL
JGIcombinedJ51221_101459092	3300003505	Forest Soil	MIARLRQALRRAKSSSKNHSIRFDRPLIVFQSDDWGRAGVRDREGWEELRAV
Ga0062384_1010651952	3300004082	Bog Forest Soil	MRNARAAPEQGQMITRLRNPLRRTRKVSPHPALRFDRPLVLFQSDDWGRAGVRDREGWEELREAGLNLGEKPYDFYSLETAGDLHALGEVLR
Ga0062389_1021887961	3300004092	Bog Forest Soil	MIPRLRNMFGRARKSKLSTFPALRFDRPLVLFQSDDWGRVGIRDREGWAELQKAGLNL
Ga0075017_1001949103	3300006059	Watersheds	MTRLRRVWERVTKQQAKHGLRFDRPLLLFQSDDWGRVGVRDRQGWDELRAAGVHIGEAPYDFYSLETAEDVQ
Ga0075030_1002148491	3300006162	Watersheds	MTRLRRVWERVTKQQAKHGLRFDRPLLLFQSDDWGRVGVRDRAGWNDLQAAGVQLGEASYDFYSLETAEDVQALRE
Ga0075014_1003800811	3300006174	Watersheds	MITRLRNALGREKKSSTHRALRFDRPLVLFQSDDWGRVGVRDREGWEELRAAGLNLGEKPYDFYSLET
Ga0099791_102048132	3300007255	Vadose Zone Soil	MLNALRRLRRGDDRPSELRFDCPLVLFQSDDWGRAGVRDREGWEELLAAGLNLGEKPYDFYSLETAEDLHALR
Ga0099792_110924941	3300009143	Vadose Zone Soil	MITRLRDALGLAKLATPAALRFGRPLVLFQSDDWGRAGVRDREGWEELRAAGLNLGEKPYDFYSLET
Ga0116136_10117501	3300009547	Peatland	MITRLRNALGLATKPAAHPALRFDRPLVLFQSDDWGRAGVRD
Ga0116133_10133104	3300009623	Peatland	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWVELRAAGLNLGEKPYDFYSLETAEDVH
Ga0116133_11657651	3300009623	Peatland	VITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGL
Ga0116110_10683901	3300009643	Peatland	MITRLRNALWRAKKPSTYPALRFDRPLVLFQSDDWGRAGVRDREGWEELRA
Ga0074046_100438201	3300010339	Bog Forest Soil	VITRLRNALGLAKKSPTPPALRFDRPLVLFQSDDWGRAGVRDREGWEE
Ga0136449_1009846771	3300010379	Peatlands Soil	MITRLRNALGLAKSATPPALRFDRPLVLFQSDDWGRAGVRDRE
Ga0137363_114049712	3300012202	Vadose Zone Soil	MITRLRNALWPAKKSPAYPALHFNRPLVLFQSDDWGRAGVRDREGWEELRAAGLNLGEKPYDFY
Ga0137399_100676974	3300012203	Vadose Zone Soil	MLNALRRLRRGVDRPSELRFDRPLVLFQSDDWGRAGVRDREGWEELLAAGLNLGEQPYDFYSLET
Ga0137397_108092221	3300012685	Vadose Zone Soil	MITRLRNALWRAKKSPAFPALRFDRPLVLFQSDDW
Ga0137395_102959751	3300012917	Vadose Zone Soil	MITRLRDALGLAKSATPAAVRFDRPLVLFQSDDWGRAGVRDREGWEELRAGGLN
Ga0137359_115187661	3300012923	Vadose Zone Soil	MTLLQGRTEMIARLRNALWRAKKSSTRPAIRFDRPLVLFQSDDWGRAGVRDREGWEELLAAGLNLGEKP
Ga0181533_12235602	3300014152	Bog	MITRLRNALWRAKKSSMHPALRFDRPLVLFQSDDWGRAGVRDREGWEELRAAGLNLGENPYDFYSLETAEDLHALGEVLRK
Ga0181538_102715281	3300014162	Bog	LITRLKRVWERATGESAARGLRFDRPLLLFQSDDWGRVGIRDRPGWERLRAAGLALGEKPYDFYSLETAADVQALGEL
Ga0182014_100364341	3300014491	Bog	MRRREMIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDFYSLETAEDV
Ga0182014_101095963	3300014491	Bog	VITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLGE
Ga0182014_103295292	3300014491	Bog	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLGE
Ga0182013_101342033	3300014492	Bog	VITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRD
Ga0137418_102494761	3300015241	Vadose Zone Soil	MIARLRNALWRAKKSSTRPAIRFDRPIVLFQSDDWGRAGVRDRE
Ga0187818_101321473	3300017823	Freshwater Sediment	MTTRLQRIWERATASSPKRGLRFDRPLLLFQSDDWGRVGVRDREGWEQLRAAGVQLGEAP
Ga0187779_110833901	3300017959	Tropical Peatland	MITRLRRAWERATGSSNQRGLSFDRPLLLFQSDDWGRVGVRDRDGWEELCAAGVSLGEQP
Ga0187782_101477184	3300017975	Tropical Peatland	MITRLRRLWERANSATRHGLRFDRPLLLFQSDDWGRVGVRDREGWEALCAAGLQLGAKPYDFYSLETA
Ga0181520_105116451	3300017988	Bog	MITGLRRVWERATKSPADKGLRFDRPLVLFQSDDWGRVGVRDCEGWDQLRASGIKLGEAPYDYYTLETAADVDAL
Ga0187874_102145301	3300018019	Peatland	MITRLRNALWRAKKSSMHPALRFDRPLVLFQSDDWGRAGVRDREGWEELRAAGLNLGENP
Ga0187863_100061445	3300018034	Peatland	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDF
Ga0187851_100430485	3300018046	Peatland	MITGLRRVWERATKSPADKGLRFDRPLVLFQSDDWGRVGVRDCEGWDQLRASGIKLGEAPYDYYTLETAADVDALRAVLE
Ga0187851_101172821	3300018046	Peatland	MITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRDRE
Ga0187851_101270821	3300018046	Peatland	VITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRDRE
Ga0182031_10009152	3300019787	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDFYSLEQPRTCMRSREF
Ga0182031_10864881	3300019787	Bog	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDFYSLETAEDVQQPR
Ga0182031_11731342	3300019787	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDFYSLETAEDVHALAEF
Ga0182031_13169203	3300019787	Bog	VITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDF
Ga0210386_114480421	3300021406	Soil	MIARLRQALRRVKSSSKNHSIRFDRPLIVFQSDDWGRAGVRDREGWEELRAVGLNLGEKPYDFYSLETADDLHAIEDVLSKHRDS
Ga0210383_113734351	3300021407	Soil	MIAGLKKMLGRVNRPPTPPNLRFGRPLILFQSDDWGRAGVRDREGWEELRAAGLNLGEKPYDF
Ga0210390_102881461	3300021474	Soil	MITRLRDALRRVKKSSADPDLRFDRPLVLFQSDDWGRVGVRDREGWEELRADGLNLGEKPYD
Ga0210398_102790471	3300021477	Soil	MIARLRQALRRAKSSSKNHSIRFDRPLIVFQSDDWGRAGVRDREGWEELRAVGLNLGEKPYDFYSLETADDLHAIEDVLS
Ga0224557_10199475	3300023101	Soil	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDFYS
Ga0224557_10637061	3300023101	Soil	VITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNL
Ga0224556_11071602	3300024295	Soil	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDR
Ga0224556_11399862	3300024295	Soil	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNLG
Ga0224556_11679842	3300024295	Soil	MISRIRNRLSWTKSKTPAGLRFDRPLVLFQSDDWGRVGVRDREGWEELCAAGLNLGEKPYDFYSLETADDLHA
Ga0208034_10492771	3300025442	Peatland	MITRLRNALGLATKPAAHPALRFDRPLVLFQSDDWGRAGVRDCEGWEELRAAGLNLGEKPYDF
Ga0207646_104890941	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIARLRDALGLVKSATPAALRFDRPLVLFQSDDWGRAGVRDREGWEELRAAGLNLGEKPY
Ga0257167_10179601	3300026376	Soil	MITRLRNVLGRAKKASTHPALRFDRPLVLFQSDDWGRAGVRDREGWEELRAAGLNLGEKPYDFYSLET
Ga0255351_10466292	3300026456	Soil	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREG
Ga0257181_10150941	3300026499	Soil	MITRLRNVLGRAKKASTHPALRFDRPLVLFQSDDWGRAGVRDREGWEELRAAGLNLGEKP
Ga0179587_103018242	3300026557	Vadose Zone Soil	VCGLANDTAVKRRSEVITRLRNALGRAKKSSAYPTLRFDRPLVLFQSDDWGRAGVRDREGWEELRATGLNLGEKPYDFYSLETAEDLHA
Ga0179587_107563891	3300026557	Vadose Zone Soil	MITRLRNALWPAKKSPAYPALHFNRPLVLFQSDDWGRAGVRDREGWEELLA
Ga0209905_10691861	3300027634	Thawing Permafrost	MRNAGSAQGRSEVITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRDREGWD
Ga0209076_11159031	3300027643	Vadose Zone Soil	VITRLRNALGRAKKSSAYPALRFDRPLVLFQSDDWGRAGVRDREGWEELRAAGLNLGEKPYDFYSLETAEDL
Ga0209380_100994271	3300027889	Soil	MIARLRQALRRVKSSSKNHSIRFDRPLIVFQSDDWGRAGVRDREGWEELRAVGLNLG
Ga0209068_101408624	3300027894	Watersheds	MIARLRNALGRAKKSPTNPALRFDRPLVLFQSDDWGRAGVRDREGW
Ga0209698_114084862	3300027911	Watersheds	MITRLRNALGQAKTAHPALRFDRPLVLFQSDDWGRAGVRDS
Ga0302149_10046976	3300028552	Bog	VITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLGEKP
Ga0302149_11200172	3300028552	Bog	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLGEKP
Ga0257175_10010624	3300028673	Soil	MITRLRDALGLAKLATPAALRFGRPLVLFQSDDWGRAGVRDREGWEEL
Ga0302156_100796551	3300028748	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNLGEKPY
Ga0302202_103421352	3300028762	Bog	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGW
Ga0302189_101637282	3300028788	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGV
Ga0302268_11428451	3300028854	Bog	MISRIRNRLSWTKSKTPAGLRFDRPLVLFQSDDWGRVGVRDREGWEELCAAGLNLGEKPYDFYSLET
Ga0302265_11650492	3300028859	Bog	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAG
Ga0302278_100526771	3300028866	Bog	MRNAGSAQGRSEVITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLGEKP
Ga0302278_100782421	3300028866	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDFYSLETAEDVH
Ga0302197_103016571	3300028873	Bog	MITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRD
Ga0302154_103499032	3300028882	Bog	MITRLRNALSVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLGEKP
Ga0311341_104329221	3300029908	Bog	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLG
Ga0311359_101506844	3300029914	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDFYSLE
Ga0311358_103390051	3300029915	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDFYSLETAE
Ga0311358_106646522	3300029915	Bog	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNL
Ga0311326_103420711	3300029917	Bog	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWDELR
Ga0311328_103004381	3300029939	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDFYSLETA
Ga0311343_101354651	3300029953	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDF
Ga0311331_100831411	3300029954	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDFY
Ga0302277_12201372	3300029982	Bog	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLN
Ga0311365_100929663	3300029989	Fen	MITRIRQSLAWVKRLSTNHGLRFSRPLLLFQSDDWGRAGVRDRAGWEELQASGLKLGE
Ga0302276_100206871	3300029992	Bog	MRNAGSAQGRSEVITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRDREGWDELRA
Ga0302276_103883282	3300029992	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWG
Ga0311350_103807902	3300030002	Fen	MITRIRQSLAWVKRLSTNPGLRFSRPLLLFQSDDWGRAGVRDRAGWEELQASGLTLGEKPYDFYSLE
Ga0302172_102008141	3300030003	Fen	MIIPLRRAWHRVTKSAPDNGLHFDRPLLIFQSDDWGRVGVRDHEGRDQLQAAGLQLGEKPYDFYTLETAEDLEA
Ga0302270_105250481	3300030011	Bog	MISRIRNRLSWTKSKTPAGLRFDRPLVLFQSDDWGRVGVRDREGW
Ga0302274_102801621	3300030041	Bog	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLGEK
Ga0302282_10239625	3300030045	Fen	MISRIRNRLSWTKSKTPAGLRFDRPLVLFQSDDWGRVGVRDREGWEELCAAGLNLGE
Ga0302191_100310224	3300030049	Bog	MISRIRNRLSWTKSKTPAGLRFDRPLVLFQSDDWGRVGVRDREGWEELCAAGLNLGEKPY
Ga0302192_101936602	3300030507	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNL
Ga0302275_100469895	3300030518	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREG
Ga0302318_100087195	3300031258	Bog	MISRIRNRLSWTKSKTPAGLRFDRPLVLFQSDDWGRVGVRDREGWEELCAAGL
Ga0302140_100619885	3300031261	Bog	MIARLRNALGLAKSATPVALRFDRPLVLLQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDFYSLETAEDV
Ga0335081_125661631	3300032892	Soil	MITRLSRIFGGSTKSPASHGLRFDRPLLLFQSDDWGRVGVRDREGWNELRAAGIDLGGSPYDFYSLETADDVTALG
Ga0334828_015237_2_196	3300033822	Soil	MRNAGSAQGRSEVITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNL
Ga0334828_081440_2_211	3300033822	Soil	MITRLRNALGVAKSPRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDFYSLETAEDVH
Ga0334840_006719_4375_4584	3300033824	Soil	VITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLGEKPYDFYSLETAEDVH
Ga0334827_071665_2_163	3300034065	Soil	VITRLRNALGGAKAVRALRFDRPLVLFQSDDWGRAGVRDREGWDELRAAGLNLG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101681

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences