Metagenome Family F101741

Basic Information
Family ID	F101741
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	90 residues
Representative Sequence	QLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP
Number of Associated Samples	76
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	4.90 %
% of genes from short scaffolds (< 2000 bps)	4.90 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (95.098 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (34.314 % of family members)
Environment Ontology (ENVO)	Unclassified (63.725 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.627 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.77% β-sheet: 32.95% Coil/Unstructured: 52.27%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13660	DUF4147	7.84
PF02368	Big_2	2.94
PF01833	TIG	1.96
PF00190	Cupin_1	1.96
PF07676	PD40	1.96
PF13519	VWA_2	0.98
PF00528	BPD_transp_1	0.98
PF13466	STAS_2	0.98
PF06262	Zincin_1	0.98
PF00903	Glyoxalase	0.98
PF03446	NAD_binding_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3824	Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domain	Posttranslational modification, protein turnover, chaperones [O]	0.98

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
All Organisms	root	All Organisms	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
cellular organisms	root	All Organisms → cellular organisms	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	4.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	95.10 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4.90 %

Scaffold	Taxonomy	Length	IMG/M Link
3300006173\|Ga0070716_100647888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	800	Open in IMG/M
3300006796\|Ga0066665_11052071	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300006854\|Ga0075425_102163716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300006914\|Ga0075436_100710250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300027879\|Ga0209169_10689782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.10%
Host-Associated	Host-Associated	4.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.12%
Plants	Host-Associated → Plants	4.90%
Aquatic	Environmental → Aquatic	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.94%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.96%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Peat	Environmental → Terrestrial → Peat	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.25%
Loam	Environmental → Terrestrial → Soil → Loam	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	50.98%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	34.31%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.67%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	12.75%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.96%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25383J37093_101272791	3300002560	Grasslands Soil	LSEGFREVNPLIRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGAIVGHNIALLRWR*
JGI25382J43887_100294071	3300002908	Grasslands Soil	GQLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALVGHNIALLSGRP*
JGI25388J43891_10539171	3300002909	Grasslands Soil	LPIFAVQLTADAITTQRGLSEGFREVNPLIRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGAIVGHNIALLRWR*
Ga0062388_1001780481	3300004635	Bog Forest Soil	KIDFSIFAGQLAADAITTQRGLGNGFREANPIAAPFVNHGAPGAAAASALSFGAGVGVAYVLHRTHHYKAEHIAVRVMLAGEGAVVGHNIALLR*
Ga0066683_103780102	3300005172	Soil	MEKKIDVSIFAMQLTADAITTQRGLSTGFREVNPLLRPLVKRGVAGQTAATISSFGTGLGLVYLLHTTHHYRAERITLCLILAGEGALVGHNIALLH*
Ga0066680_100620772	3300005174	Soil	DAPSTRRFWSAENKIDLSIFAGQLAADAITTQKGLSEGFREVNPLMRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGR*
Ga0066680_100854671	3300005174	Soil	TTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERLTLRLILAGEGALVGHNIALLSGRP*
Ga0066680_104804042	3300005174	Soil	QLAADAITTQRGLSEGFREVNPLIRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHFRAERITLRLILAGEGALVGHNIALLR*
Ga0066685_103741541	3300005180	Soil	GLSTGFREVNPVLRPFVKRGVAGQTAATVWSFGSGLGAVYLLHATHHYRAERITLRLILAGEGALVGHNIALLH*
Ga0066678_106201031	3300005181	Soil	KYWSTENKINFSILAAQVAADAITTQRGLNQGLREANPLMRPLVTRGVVGQTTASALGFGAGLGTVYLLHVMHHYRAERITMRLILAGEGAIVAHNIALLR*
Ga0066675_107315671	3300005187	Soil	LSEGFREVNPLMRPLVTRGVAGQATASALSFGASLGTVYLLHVTHHYRAERITLRLVLAGEGALVGHNIALLRGR*
Ga0066675_108584031	3300005187	Soil	DKIDFSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERLTLRLILAGEGALVGHNIALLSGRP*
Ga0070713_1016058071	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	EGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0066681_107338501	3300005451	Soil	IFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGAVGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALVGHNIALLSGRP*
Ga0066697_101284251	3300005540	Soil	SAENKIDLSIFAGQLAADAITTQKGLSEGFREVNPLMRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGR*
Ga0066697_103486631	3300005540	Soil	SAENKIDLSIFAGQLAADAITTQKGLSEGFREVNPLMRPLFTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0066701_101396122	3300005552	Soil	KIDFSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGAVGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALVGHNIALLSGRP*
Ga0066701_108900161	3300005552	Soil	SAENKIDLSIFAGQLAADAITTQRGLSEGLREVNPLMRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHDRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0066661_102129403	3300005554	Soil	TTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALVGHNIALLSGRP*
Ga0066692_108568772	3300005555	Soil	QLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0066707_100864881	3300005556	Soil	SEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERLTLRLILAGEGALVGHNIALLSGRP*
Ga0066707_108380572	3300005556	Soil	APSMHKFWNTENKIDFSIFAGQLAADAITTQRGLSEGFREMNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVKHHYRAERITLRLILAGEGALVGHNIALLSGRP*
Ga0066704_105692912	3300005557	Soil	LMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0066700_103926052	3300005559	Soil	APSTRRFWSAENKIDLSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLFLAGEGALVGHNIALLRGR*
Ga0066670_105884452	3300005560	Soil	AITTQQGLSEGFREVNPLLRPLVTRGVAGQGTASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGR*
Ga0066699_111586591	3300005561	Soil	QLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAELVTLRLILAGEGALVGHNIALLSGRP*
Ga0066705_107387212	3300005569	Soil	DFSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALVGHNIALLSGRP*
Ga0066708_102873182	3300005576	Soil	GFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALIGHNIALLSGRP*
Ga0066706_106975312	3300005598	Soil	GFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0068863_1002307782	3300005841	Switchgrass Rhizosphere	MFAAQMAGDAITTQYGLNHGFREMNPLLRPLVTRGVAGQTAASALSFGFGLGIVYWLHAKHHYRAERLTMRMILAGEGAVVGHNIAVIR*
Ga0070716_1006478881	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	ITTQRGLSEGFKEVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVRHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0070716_1007764012	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GLSEGFKEVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALVGHNIALLH*
Ga0066665_110520711	3300006796	Soil	ITTQRGLSEGFREVNPLIRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHDRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0066659_100280521	3300006797	Soil	LAADAITTQKGLSEGFREVNPLMRPMVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGR*
Ga0066659_102206951	3300006797	Soil	NKIDLSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHSRAERVTLRLILAGEGALVGHNIALLSGRP*
Ga0075425_1021637161	3300006854	Populus Rhizosphere	AGQVAADAITTQRGLSEGFKEVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0075436_1007102503	3300006914	Populus Rhizosphere	ITTQRGLSSGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVRHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0066710_1026658802	3300009012	Grasslands Soil	LSIFAGQLAADAITTQQGLSEGFREVNPLLRPLVTRGVAGQGTASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGR
Ga0066710_1031596221	3300009012	Grasslands Soil	IDFSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFRAGLGTVYLLHVTHHYRAERVTLRLMLAGEGALIGHNIALLSGRP
Ga0066710_1037338641	3300009012	Grasslands Soil	DAPSMHKFWNTENKIDFSIFAGQLAADAITTQRGLSEGFREMNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVKHHYRAERITLRLILAGEGALVGHNIALLSGRP
Ga0099827_100333751	3300009090	Vadose Zone Soil	KIDLSIFARQLPADAITTQRGLSEGFREVNPLIRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHFRAERITLRLILAGEGALVGHNIALLR*
Ga0066709_1020000471	3300009137	Grasslands Soil	STRRFWSAENKIDLSIFAGQLAADAITTQRGLSEGFREVNPLIRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHFRAERITLRLILAGEGALVGHNIALLR*
Ga0066709_1022252761	3300009137	Grasslands Soil	ITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHATHHYRAERVTLRLILAGEGALVGHNIALLSGRP*
Ga0066709_1025045681	3300009137	Grasslands Soil	IDFSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFRAGLGTVYLLHVTHHYRAERVTLRLMLAGEGALIGHNIALLSGRP*
Ga0066709_1040093921	3300009137	Grasslands Soil	KIDFSIFAGQLAADAITTQRGLSEGFREMNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVKHHYRAERITLRLILAGEGALVGHNIALLSGRP*
Ga0066709_1044602921	3300009137	Grasslands Soil	TQKGLSEGFREVNPLMRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYPAERITLRLILAGEGALVGHNIALLRER*
Ga0066709_1046831702	3300009137	Grasslands Soil	TRRFWSAENKIDLSIFAAQLTADAITTQLGLGEGFREVNPLMRPLVTRGVAGQATASALSFGAGVGTVYLLHVTHHYRAELITLRLILAGEGALVGHNIALLRGR*
Ga0134088_103000321	3300010304	Grasslands Soil	SEGLREVNPQRRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHNRAERISLCIILAGEGALVGHNIALLRGR*
Ga0134086_101360461	3300010323	Grasslands Soil	RFWSAENKIDLSIFAGQLAADAITTEQCLSEGFREVNPLLRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGTLK*
Ga0134064_103922471	3300010325	Grasslands Soil	IDLSIFAGQLAADAITTQRGLSEGFREVNPLIRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHFRAERITLRLVLAGEGALVGHNIALLRGR*
Ga0134063_100397051	3300010335	Grasslands Soil	TRRFWSAENKIDLSIFAGQLAADAITTQRGLSEGFREVNPLIRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGAIVGHNIALLRWR*
Ga0134071_100896052	3300010336	Grasslands Soil	REVNPLMRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGR*
Ga0134071_107925461	3300010336	Grasslands Soil	SGFREMNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVMHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0134066_100941161	3300010364	Grasslands Soil	STRRFWSAENKIDLSIFAVQLTADAITTQRGLSEGFREVNPLIRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGAIVGHNIALLRWR*
Ga0136449_1028963652	3300010379	Peatlands Soil	LSQGFREANPLMRPLVTRGAAGEATGSALGFGAGLGAVYLLHRSHHYKAERITLRLMVGGESAFVGNNIAAIR*
Ga0137391_104790332	3300011270	Vadose Zone Soil	FSILTGQVAVDAITTQRGLNQGLREANPLMRPLVSKGIAGQTTASALGFGAGLGTVYLLHVMHHYRAERITMRLILAGEGAIVAHNIALLR*
Ga0137389_105568832	3300012096	Vadose Zone Soil	LSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTQHYRAERVTLRLILAGEGALVGHNIALLSGRP*
Ga0137364_104960541	3300012198	Vadose Zone Soil	KGLSEGFREVNPLMRPLVTRGVAGQATASALSFGASLGTVYLLHVTHHYRAERITLRLVLAGEGALVGHNIALLRGR*
Ga0137364_111062972	3300012198	Vadose Zone Soil	SIEKKIDVSIFAMQLTADAITTQRGLNKGFREANPLLRPLVKRGVAGQTAATVLSFGTGVGAVYLLHATHHYRAERIALRLILAEEGVLVGHNIALLH*
Ga0137383_110490722	3300012199	Vadose Zone Soil	LSSGFREMNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0137380_103840552	3300012206	Vadose Zone Soil	AADAITTQRGLSEGFREVNPLMRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYPAERITLRLILAGEGALVGHNIALLRGR*
Ga0137380_113525112	3300012206	Vadose Zone Soil	EGFREVNPLMRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGR*
Ga0137381_103447111	3300012207	Vadose Zone Soil	ITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0137379_101544422	3300012209	Vadose Zone Soil	DAITTQRGLSEGFREVNPLMRPLVTRGVAGQGTASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGR*
Ga0137378_101700171	3300012210	Vadose Zone Soil	REVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0137387_101324422	3300012349	Vadose Zone Soil	SIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGVAGQGTASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGR*
Ga0137387_102616321	3300012349	Vadose Zone Soil	KIDFSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALVGHNIALLSGRP*
Ga0137387_107743791	3300012349	Vadose Zone Soil	RGSSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVCLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0137386_103087072	3300012351	Vadose Zone Soil	SEGFREVNPLMRPLVTRGAAGQATASATSFGAGLGTVYLLHATHHYRAERVTLRLILAGEGALVGHNIALLSGRP*
Ga0137386_111119141	3300012351	Vadose Zone Soil	HKFWNTENKIDFSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGAVGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALVGHNIALLSGRP*
Ga0137371_105231401	3300012356	Vadose Zone Soil	QLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALVGHNIALLSGRP*
Ga0137384_108771972	3300012357	Vadose Zone Soil	NKIDFSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGAVGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALVGHNIALLSGRP*
Ga0137385_100828854	3300012359	Vadose Zone Soil	AGQLAADAITTQRGLSEGFREVNPLMRPLVTRGVAGQGTASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGR*
Ga0137385_103824831	3300012359	Vadose Zone Soil	ADAITTQRGLSEGFREVNPLMRPLVTRGAVGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALVGHNIALLSGRP*
Ga0134087_106229082	3300012977	Grasslands Soil	ENKIDLSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP*
Ga0134087_107754461	3300012977	Grasslands Soil	RFWSAENKIDLSIFAGQLAADAITTQKGLSEGFREVNPLMRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGR*
Ga0157374_115036151	3300013296	Miscanthus Rhizosphere	RFWTTENKISVSMFAAQMAGDAITTQYGLNHGFREMNPLLRPLVTRGVAGQTAASALSFGFGLGIVYWLHAKHHYRAERLTMRMILAGEGAVVGHNIAVIR*
Ga0134073_100370012	3300015356	Grasslands Soil	ITTQRGLSEGFREVNPLIRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGAIVGHNIALLRWR*
Ga0134089_104612641	3300015358	Grasslands Soil	APSMHKFWNTENKIDFSIFAGQLAADAITTQRGLSEGFREVNPLLRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERLTLRLILAGEGALVGHNIALLSGRP*
Ga0134085_104053391	3300015359	Grasslands Soil	ENKIDFSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALVGHNIALIRGRP*
Ga0134112_101826061	3300017656	Grasslands Soil	ITTQKGLSEGFREVNPLMRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHNRAERISLCIILAGEGALVGHNIALLGGR
Ga0066667_112716132	3300018433	Grasslands Soil	PSTRRFWSAENKIDLSIFAGQLAADAITTQRGLSEGFREVNPLLRPLVTRGAAGQATASALSFGAGLGTVYLLHVMHHYRAERITLRLILAGEGALIGHNIALLSGRP
Ga0066662_128741991	3300018468	Grasslands Soil	QLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHATHHYRAERVTLRLILAGEGALVGHNIALLSGRP
Ga0066669_102534381	3300018482	Grasslands Soil	APSPRRFWSAENKIDLSIFAGQLAADAITTEQGLSEGFREVNPLLRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGR
Ga0066669_112494781	3300018482	Grasslands Soil	KIDFSIFAGQLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHATHHYRAERVTLRLILAGEGALVGHNIALLSGRP
Ga0066669_118169722	3300018482	Grasslands Soil	FREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERLTLRLILAGEGALVGHNIALLSGRP
Ga0207700_116471421	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	EGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP
Ga0207641_101006992	3300026088	Switchgrass Rhizosphere	MFAAQMAGDAITTQYGLNHGFREMNPLLRPLVTRGVAGQTAASALSFGFGLGIVYWLHAKHHYRAERLTMRMILAGEGAVVGHNIAVIR
Ga0209688_10139533	3300026305	Soil	RFWSAENKIDLSIFAVQLTADAITTQRGLSGGFREVNPLIRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGAIVGHNIALLRWR
Ga0209802_13293791	3300026328	Soil	KIDFSIFAGQLAADAITTQRGLSSGFREMNPLMRPLVTRGAAGQATASALSFGAGLGTVCLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP
Ga0209057_11084871	3300026342	Soil	AITTQKGLSEGFREVNPLMRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALLRGR
Ga0209160_10328324	3300026532	Soil	DAITTQRGLSEGFREVNPLMRPLVTRGAVGQATASALSFGAGLGTVYLLHVTHHYRAERVTLRLILAGEGALVGHNIALLSGRP
Ga0209805_13672151	3300026542	Soil	AITTQRGLSEGFREVNPLLRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAELVTLRLILAGEGALVGHNIALLSGRP
Ga0209156_102570202	3300026547	Soil	IDLSIFAAQLAADAITTQRGLSEGFREVNPLMRPLVTRGVAGQATASALSFGASLGTVYLLHVTHHYRAERITLRLVLAGEGALVGHNIALLRGR
Ga0209161_101517553	3300026548	Soil	QLAADAITTQRGLSEGFREVNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERLTLRLILAGEGALVGHNIALLSGRP
Ga0209161_103293283	3300026548	Soil	MNPLMRPLVTRGAAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGALVGHNIALIRGRP
Ga0209169_106897821	3300027879	Soil	AVPDAPSHRPFWTFENKVSFSALAGLIAADAFTTQRGLSQGYREANPLMRPFVTRGAAGEAVGSALGFGAGLGTVYLLHQTHHYKAERIAMRLIVGGEGAVVGHNVAVLH
Ga0209590_108183712	3300027882	Vadose Zone Soil	DAPSTRRFWSAENKIDLSIFAVQLTADAITTQRGLSEGFREVNPLIRPLVTRGVAGQATASALSFGAGLGTVYLLHVTHHYRAERITLRLILAGEGAIVGHNIALLRWR
Ga0308309_104556532	3300028906	Soil	SALAGLIAADAFTTQRGLSQGYREANPLMRPFVTRGAAGEAVGSALGFGAGLGTVYLLHQTHHYKAERIAMRLIVGGEGAVVGHNVAVLH
Ga0247271_1018257	3300029903	Soil	VAADAITTQRGLSEGFREANPVMRPFVTRGATGQGVGSALGFGVGLGAVYLLHQSHHYKAERVTMRLMVGVEGAVVASNIVQIR
Ga0310686_1059406431	3300031708	Soil	TQRGLSQGYREANPLMRPFVTRGTAGEAVGSALGFSAGLGTVYLLHQTHHYKAERLAMRLIVGGEGAVVGHNIAVLH
Ga0326727_100095392	3300033405	Peat Soil	MLGSLFVADTITTQIGVHNGFKEMDPLMRPFVSRGPAGNAVGSALGFGACLGAAYLLHRSHHYKAERMSLRLMVAGEGAVVGHNIATIR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101741

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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