Metagenome Family F101770

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101770
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	89 residues
Representative Sequence	ESKNEMLVMVLTDLAAICNKLSENSAVPEGLRVKAREFVAEFNSLLPVRGKGTAAQHAQGEQLLIKIARFLPRVLEVHAEPATAPRE
Number of Associated Samples	56
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	71.57 %
% of genes near scaffold ends (potentially truncated)	29.41 %
% of genes from short scaffolds (< 2000 bps)	74.51 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (73.529 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (38.235 % of family members)
Environment Ontology (ENVO)	Unclassified (53.922 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (82.353 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.52% β-sheet: 0.00% Coil/Unstructured: 43.48%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
a.29.13.1: Bacillus cereus metalloprotein-like	d3dbya1	3dby	0.74
a.29.13.1: Bacillus cereus metalloprotein-like	d3dbya2	3dby	0.74
a.29.3.0: Acyl-CoA dehydrogenase C-terminal domain-like	d2pg0a2	2pg0	0.73
a.24.9.1: alpha-catenin/vinculin-like	d1st6a4	1st6	0.72
a.29.3.0: Acyl-CoA dehydrogenase C-terminal domain-like	d5zw7a2	5zw7	0.72

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13590	DUF4136	8.82
PF10011	DUF2254	5.88
PF03631	Virul_fac_BrkB	1.96
PF13751	DDE_Tnp_1_6	1.96
PF09363	XFP_C	1.96
PF00072	Response_reg	0.98
PF05690	ThiG	0.98
PF04055	Radical_SAM	0.98
PF01609	DDE_Tnp_1	0.98
PF02371	Transposase_20	0.98
PF00271	Helicase_C	0.98
PF04264	YceI	0.98
PF00589	Phage_integrase	0.98
PF01850	PIN	0.98
PF01758	SBF	0.98
PF01904	DUF72	0.98
PF01757	Acyl_transf_3	0.98
PF12704	MacB_PCD	0.98
PF13502	AsmA_2	0.98
PF01548	DEDD_Tnp_IS110	0.98
PF01527	HTH_Tnp_1	0.98
PF07885	Ion_trans_2	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.96
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.96
COG0214	Pyridoxal 5'-phosphate synthase subunit PdxS	Coenzyme transport and metabolism [H]	0.98
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.98
COG2022	Thiazole synthase ThiGH, ThiG subunit (thiamin biosynthesis)	Coenzyme transport and metabolism [H]	0.98
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.98
COG2353	Polyisoprenoid-binding periplasmic protein YceI	General function prediction only [R]	0.98
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.98
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.98
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.98
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.98
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.98
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.53 %
Unclassified	root	N/A	26.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	73.53 %
Unclassified	root	N/A	26.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	73.53 %
Unclassified	root	N/A	26.47 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	31.37 %
Unclassified	root	N/A	26.47 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.47 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	14.71 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.96 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.47 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	13.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.94 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	0.98 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.98 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	0.98 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.47 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13.73 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.98 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.98 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	0.98 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.94 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.96 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.98 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.98 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	0.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.94 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.96 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.98 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	0.98 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	26.47 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.94 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.96 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.98 %
Pseudomonas sp. GP01-A4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GP01-A4	0.98 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	0.98 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459004\|F62QY1Z01BBXIT	Not Available	525	Open in IMG/M
3300004479\|Ga0062595_100102896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1525	Open in IMG/M
3300004633\|Ga0066395_10971822	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300005332\|Ga0066388_100042440	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4524	Open in IMG/M
3300005332\|Ga0066388_100437440	All Organisms → cellular organisms → Bacteria	1951	Open in IMG/M
3300005332\|Ga0066388_101894715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. GP01-A4	1064	Open in IMG/M
3300005332\|Ga0066388_102213028	All Organisms → cellular organisms → Bacteria → Acidobacteria	992	Open in IMG/M
3300005332\|Ga0066388_105379903	All Organisms → cellular organisms → Bacteria	649	Open in IMG/M
3300005332\|Ga0066388_105592260	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300005334\|Ga0068869_100265527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1375	Open in IMG/M
3300005434\|Ga0070709_10166719	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1536	Open in IMG/M
3300005440\|Ga0070705_100668185	Not Available	812	Open in IMG/M
3300005764\|Ga0066903_100098612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3933	Open in IMG/M
3300005764\|Ga0066903_100198969	All Organisms → cellular organisms → Bacteria	2993	Open in IMG/M
3300005764\|Ga0066903_101943634	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1128	Open in IMG/M
3300005764\|Ga0066903_106325253	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300005764\|Ga0066903_107597734	Not Available	559	Open in IMG/M
3300005764\|Ga0066903_108541422	Not Available	522	Open in IMG/M
3300006173\|Ga0070716_100097669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1793	Open in IMG/M
3300009792\|Ga0126374_10052206	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2082	Open in IMG/M
3300009792\|Ga0126374_10545374	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300010043\|Ga0126380_10055455	All Organisms → cellular organisms → Bacteria	2165	Open in IMG/M
3300010046\|Ga0126384_10140370	All Organisms → cellular organisms → Bacteria	1847	Open in IMG/M
3300010048\|Ga0126373_10000113	All Organisms → cellular organisms → Bacteria	58702	Open in IMG/M
3300010048\|Ga0126373_10017661	All Organisms → cellular organisms → Bacteria → Acidobacteria	5957	Open in IMG/M
3300010048\|Ga0126373_10024810	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5117	Open in IMG/M
3300010048\|Ga0126373_10058247	All Organisms → cellular organisms → Bacteria	3456	Open in IMG/M
3300010048\|Ga0126373_10493564	All Organisms → cellular organisms → Bacteria	1266	Open in IMG/M
3300010048\|Ga0126373_10700363	All Organisms → cellular organisms → Bacteria → Acidobacteria	1071	Open in IMG/M
3300010048\|Ga0126373_12166836	Not Available	617	Open in IMG/M
3300010048\|Ga0126373_12730899	Not Available	551	Open in IMG/M
3300010358\|Ga0126370_10387424	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300010358\|Ga0126370_11792115	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300010360\|Ga0126372_10501052	Not Available	1140	Open in IMG/M
3300010360\|Ga0126372_10573047	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300010361\|Ga0126378_10019658	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5798	Open in IMG/M
3300010361\|Ga0126378_10410341	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1467	Open in IMG/M
3300010361\|Ga0126378_10964907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300010361\|Ga0126378_12440524	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300010366\|Ga0126379_11879231	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300010366\|Ga0126379_12977366	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300010366\|Ga0126379_13486787	Not Available	527	Open in IMG/M
3300010371\|Ga0134125_11449944	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	748	Open in IMG/M
3300010376\|Ga0126381_101721697	Not Available	905	Open in IMG/M
3300010376\|Ga0126381_103113802	Not Available	657	Open in IMG/M
3300010398\|Ga0126383_10210115	All Organisms → cellular organisms → Bacteria → Acidobacteria	1876	Open in IMG/M
3300010398\|Ga0126383_11734005	All Organisms → cellular organisms → Bacteria	713	Open in IMG/M
3300010398\|Ga0126383_12246502	Not Available	632	Open in IMG/M
3300010400\|Ga0134122_10021366	All Organisms → cellular organisms → Bacteria → Acidobacteria	4863	Open in IMG/M
3300012971\|Ga0126369_10181698	All Organisms → cellular organisms → Bacteria → Acidobacteria	2010	Open in IMG/M
3300012971\|Ga0126369_10208604	All Organisms → cellular organisms → Bacteria	1890	Open in IMG/M
3300013297\|Ga0157378_10112770	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2495	Open in IMG/M
3300016319\|Ga0182033_10456799	All Organisms → cellular organisms → Bacteria → Acidobacteria	1090	Open in IMG/M
3300016319\|Ga0182033_11459698	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300016319\|Ga0182033_11617598	Not Available	586	Open in IMG/M
3300016341\|Ga0182035_10669714	Not Available	902	Open in IMG/M
3300016357\|Ga0182032_11546809	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300016371\|Ga0182034_11787164	Not Available	542	Open in IMG/M
3300016404\|Ga0182037_10273289	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300016404\|Ga0182037_11571440	Not Available	584	Open in IMG/M
3300016422\|Ga0182039_11333512	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300017959\|Ga0187779_10001636	All Organisms → cellular organisms → Bacteria	13952	Open in IMG/M
3300017970\|Ga0187783_10654463	Not Available	759	Open in IMG/M
3300017972\|Ga0187781_11165957	Not Available	566	Open in IMG/M
3300017973\|Ga0187780_10472180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	894	Open in IMG/M
3300018029\|Ga0187787_10209723	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300018032\|Ga0187788_10022878	All Organisms → cellular organisms → Bacteria → Acidobacteria	2002	Open in IMG/M
3300018062\|Ga0187784_10783633	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300018064\|Ga0187773_10416809	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300018086\|Ga0187769_10107126	All Organisms → cellular organisms → Bacteria	2013	Open in IMG/M
3300018089\|Ga0187774_10985720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300021560\|Ga0126371_10008559	All Organisms → cellular organisms → Bacteria → Acidobacteria	9206	Open in IMG/M
3300021560\|Ga0126371_10033958	All Organisms → cellular organisms → Bacteria	4798	Open in IMG/M
3300021560\|Ga0126371_10123817	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2614	Open in IMG/M
3300021560\|Ga0126371_10155961	All Organisms → cellular organisms → Bacteria → Acidobacteria	2349	Open in IMG/M
3300021560\|Ga0126371_10210939	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2042	Open in IMG/M
3300021560\|Ga0126371_11585249	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300021560\|Ga0126371_12067696	Not Available	686	Open in IMG/M
3300021560\|Ga0126371_12325809	All Organisms → cellular organisms → Bacteria	648	Open in IMG/M
3300021560\|Ga0126371_13018184	Not Available	570	Open in IMG/M
3300025911\|Ga0207654_10016174	All Organisms → cellular organisms → Bacteria → Acidobacteria	3880	Open in IMG/M
3300027680\|Ga0207826_1200770	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300031545\|Ga0318541_10169822	All Organisms → cellular organisms → Bacteria	1202	Open in IMG/M
3300031573\|Ga0310915_11241831	Not Available	514	Open in IMG/M
3300031682\|Ga0318560_10375874	Not Available	768	Open in IMG/M
3300031720\|Ga0307469_10085201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2157	Open in IMG/M
3300031890\|Ga0306925_10915106	All Organisms → cellular organisms → Bacteria	901	Open in IMG/M
3300031941\|Ga0310912_10356642	Not Available	1136	Open in IMG/M
3300031941\|Ga0310912_11410844	Not Available	526	Open in IMG/M
3300031942\|Ga0310916_10416730	All Organisms → cellular organisms → Bacteria → Acidobacteria	1143	Open in IMG/M
3300031947\|Ga0310909_10469967	All Organisms → cellular organisms → Bacteria → Acidobacteria	1055	Open in IMG/M
3300031947\|Ga0310909_11346217	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300032001\|Ga0306922_11709816	Not Available	622	Open in IMG/M
3300032076\|Ga0306924_10678388	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300032076\|Ga0306924_11783656	Not Available	642	Open in IMG/M
3300032076\|Ga0306924_12494799	Not Available	519	Open in IMG/M
3300032205\|Ga0307472_100084000	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2129	Open in IMG/M
3300032261\|Ga0306920_100145697	All Organisms → cellular organisms → Bacteria	3527	Open in IMG/M
3300032261\|Ga0306920_100329626	All Organisms → cellular organisms → Bacteria	2273	Open in IMG/M
3300032261\|Ga0306920_101101352	All Organisms → cellular organisms → Bacteria	1152	Open in IMG/M
3300032782\|Ga0335082_10899942	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300033289\|Ga0310914_11396934	Not Available	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.06%
Host-Associated	Host-Associated	2.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.06%
Plants	Host-Associated → Plants	2.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.61%
Loam	Environmental → Terrestrial → Soil → Loam	16.67%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.78%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	27.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.73%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.78%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	38.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.73%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	9.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.94%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.98%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4B_01864280	2170459004	Grass Soil	MTSNDAKNEMLVMVLTDLAGICKKLAENSAVPKKLRVEAREFGEEFDSLSPYRGKGTPAQHAQGEQLLVKIALFLPRVLSVQAQPRSNVA
Ga0062595_1001028962	3300004479	Soil	MTSMESKNEMLVMVLIDLAEICKKLADNSAVPDTLRAEARKFREEFDSLLPDRGKGTPAQHAQAETLVIRIARFLPKVVEGVQAAPRSHV
Ga0066395_109718222	3300004633	Tropical Forest Soil	TNESKNEMLVMVLTDQAAICQKLVDNSAVPEGLRVQARDLEGEFNSLLPVRGKGTAAQHYEGEQLITRITRFLPRVLEVRAEAA*
Ga0066388_1000424401	3300005332	Tropical Forest Soil	MTSNDAKNEMLVSVLTDLAEICKKLADNSAVPETLRVQARQFVVEFNSLAPYRSKGTPAQHAQGEALLVRIARFLPTILQVQAEPQIAEAKVPTRTLAN*
Ga0066388_1004374402	3300005332	Tropical Forest Soil	MTSARQGRGTSMSSNESKNEMLVMVLIDLAAICQKLTENPVVPEHIRGKARHLVEEFNVLLPHRGQGTEAHHFNGERLIEKMARFIPSVLEVQAQPTVVTME*
Ga0066388_1018947151	3300005332	Tropical Forest Soil	MSSNELKNEMLVMVLTDLAAICMKLAGNSAVPEELRVKARKFVEEFESLAPYRGKGTATQHAQGEQLLVQIAR
Ga0066388_1022130282	3300005332	Tropical Forest Soil	MTSNDAKNEMLVMVLTDLAEICKKLTDNEAVPETLRVQARQFVAEFSLLAPYRGKGSPAQHAQGEQLLIRIARFLPTVLQVQAGPRATVA*
Ga0066388_1053799031	3300005332	Tropical Forest Soil	MSSSQSKNEMLVMVLIDLAAICKKLTENAAVPEALRVKAREFGEEFNSLLSVRGEGNAAQHLQGEQLLIKIARFLPRLLEVQAEPAVSHR*
Ga0066388_1055922602	3300005332	Tropical Forest Soil	MLVGVLIDLAAICQKLAENSAVPEELRVKARYLVEEFDSLAPYRGKGAADQHFQGEKRVEKIARFLPRLLEVQAQPAVVQRD*
Ga0068869_1002655272	3300005334	Miscanthus Rhizosphere	MTSMESKNEMLVMVLIDLAEICKKLADNSAVPDTLRAEARKFREEFDSLLPDRGKGTPAQHAQAETLVIRIARFLPKVVEGVQAAPRSHVA*
Ga0070709_101667193	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MTSMVSKNEMLVMVLIDLAEICKKLADNSAVPDTLRAEARKFREEFDSLLPDRGKGTPAQHAQAETLVIRIARFLPKVVEGVQAAPRSHVA*
Ga0070705_1006681851	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTSMESKNEMLVMVLIDLAEICKKLADNSAVPDTLRAEARKFREEFDSLLPDRGKGSPAQHAQAETLVIRIARFLPKVVEGVQAAPRSHVA*
Ga0066903_1000986123	3300005764	Tropical Forest Soil	METALSSNEAKNEMLVMVLIDLAAICKKLAENSALPEHLRVKARELVEEFNVLLPHRGKGTEVHHFRGEKLLEKIARFLPRVLEVQAEPAVVTRE*
Ga0066903_1001989695	3300005764	Tropical Forest Soil	MNSNEAKNEMLVGVLIDLAAICQKLAENSAVPEELRVKARYLVEEFDSLAPYRGKGAADQHFQGEKRVEKIARFLPRLLEVQAQPAVVQRD*
Ga0066903_1019436342	3300005764	Tropical Forest Soil	MTSNDAKNEMLVMVLTDLAEICKKLTDNEAVPETLRVQARQFVAEFNLLSPYRGKGSPAQHAQGEQLLIRIARFLPTVLQVQAGPRATVA*
Ga0066903_1063252531	3300005764	Tropical Forest Soil	WIHLRFDMASSESKNEMLVTVLIDLAAICKKLVENPAVPETLRVQANEFVVEFNTLSQFRGKGTPTQHFQGEQLLVRIARFLPRVCEIQAEPATVPLEYNANKE*
Ga0066903_1075977342	3300005764	Tropical Forest Soil	VMVLTDLAAICKKLSENSAVPEQLRVKAGQFVDQFNELSPYRGKGTADQHFQGEQLITRIARFLPRVLEVQAQPREVA*
Ga0066903_1085414222	3300005764	Tropical Forest Soil	MSTDTSGWETATNSNESKNDMLVMVLTDLAAICQKLTENSPVPENVRVKARQLVEEFNSLLPYRGQGTATQHFQGEELLAKIAAFIPRVLEVRAEPAIIQRD*
Ga0070716_1000976693	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MTSMESKNEMLVMVLIDLAEICKKLADNSAVPDTLRAEARKLREEFDSLLPDRGKGTPAQHAQAETLVIRIARFLPKVVE
Ga0126374_100522063	3300009792	Tropical Forest Soil	MGNNQTPQSLEITMTSNDAKNEMLVMVLTDLAEICKKLTDNEAVPETLRVQARQFVAEFSLLAPYRGKGSPAQHAQGEQLLIRIARFLPTVLQVQAGPRATVA*
Ga0126374_105453741	3300009792	Tropical Forest Soil	KNEMLVGVLIDLAAICQKLAENSAVPEELRVKARYLVEEFDSLAPYRGKGAADQHFQGEKRVEKIARFLPRLLEVQAQPAVVQRD*
Ga0126380_100554552	3300010043	Tropical Forest Soil	MTSNDAKNEMLVTVLTDLAEICKKLTDNSAVPETLRVQARQFVAEFNSVAPYRGKGTAAQHAQGEARLVRIARFLPTVLQVQAEPRATVA*
Ga0126384_101403702	3300010046	Tropical Forest Soil	MSSNESKNEMLVMVLIDLAAICQKLTENPVVPEHIRGKARHLVEEFNVLLPHRGQGTEAHHFNGERLIEKMARFIPSVLEVQAQPTVVTME*
Ga0126373_1000011342	3300010048	Tropical Forest Soil	MESKNEMEVMVVTDLAAICRKLAENEALPEALQTKAREFVEEFESLLPSRGEGTAFQHARGEQLLIKIARFLPRVVEVEARPRETVTGQ*
Ga0126373_100176617	3300010048	Tropical Forest Soil	MASNESKNEMLVMVLTDLSAICDKLIDHPAVPNELRLRASDFVTEFNSLSPVRGKGNPYQHVQGQELLIKVARFLPRLLEVHAEPARVSNG*
Ga0126373_100248104	3300010048	Tropical Forest Soil	MEIPVTSNESKNEMLVMVLTDLAAICQKRAENSAVPEELRVQARRFVEEFNSLLPYRGKGTARQHFLGEDLIIKITRFLQRVLEVQAAPALPEE*
Ga0126373_100582474	3300010048	Tropical Forest Soil	MTSSQSKNEMLVMVLIDLAAICKKLNENAAVPEELRVKARQFGEEFDSLLPVRGQGTPTQHAQGEQLLIKIARFLPRLLEVQAEPAVSNR*
Ga0126373_104935641	3300010048	Tropical Forest Soil	MEITMASSESKNEMLVMVLTDLAEIYQKLVESPAVPEELRVKARQFREEFDSLLPYPGKGNAAQHSQGEQLLVKIARFLPRLLEVQAEPASVWNRDFSTAA*
Ga0126373_107003632	3300010048	Tropical Forest Soil	MSAHGDYDAANESKNEMLVMVLVDLAAICQKLTENSAVPEELRMKAHQFVEEFNLLLPYRGKGTDVQHFHGERLLEKIARFLPRLLEVQAQPAVVSHE*
Ga0126373_121668361	3300010048	Tropical Forest Soil	MSATPYATETSMASNEAKDEMLVMVVSDLAAICKKLAQDSAVPDELRVKARQFVEEFNSLLPARGEGSRAEHAAGEHLLVSMARFLPRLLEVQAQPVRGPYS*
Ga0126373_127308991	3300010048	Tropical Forest Soil	MTSNESKNETIVTVLSDLAAICKKLAENSAVPEELRVRARQFVDECNSLLPDRGKATPHQHFEAEQLLQKISLFLPRILEVEAWPSGVSENRWAS*
Ga0126370_103874242	3300010358	Tropical Forest Soil	MNSNEAKNEMLVGVLIDLAAICQKLAENSAVPEELRVKARYLVEEFDSLAPYRGKGAADRHFQGEKLVEKIARFLPRLLEVQAQPAVVQRD*
Ga0126370_117921152	3300010358	Tropical Forest Soil	SNEAKNEMLVMVLTDLAAICEKLARNSAVPQELRSQALQFRQEFDSLAPYRGKGTASQHLEGEQLLGRIARFLPRLLEVRADPAVASRD*
Ga0126372_105010521	3300010360	Tropical Forest Soil	MNSNEAKNEMLVGVLIDLAAICQKLAENSAVPEELRVKARHLVEEFDSLAPYRGKGTADQHFQGEKLVEKIARFLPRLLEVQAQPAVVQRD*
Ga0126372_105730471	3300010360	Tropical Forest Soil	MISTDSKNEMLVMVLTDLAGICRKVAEAPAVPEEMRAKARELVSKFNSLLQHRAEGTAAHHADGEQLLIQMARFLPRLVEVQAPPRDGAPVRTV*
Ga0126378_100196583	3300010361	Tropical Forest Soil	MEWENEMEVMVLTDLAGICKKLSEISELPEGLRAKARQFVEEFNLLLPVRGKGTAFEHAEGEKLLTQIARFLPRVLEVGARPTR*
Ga0126378_104103412	3300010361	Tropical Forest Soil	MSSNESKNEMLVMVLIDLAAICEKLSENSAVPEHLRVKARQLVEEFNLLLPHRGKGTEVHHFQGEKLLEKIARFLPRVLEVQAEPTVVTRE*
Ga0126378_109649071	3300010361	Tropical Forest Soil	MEISMASNEAKDEMLVMVVSDLAAICKKLAEDSVVPDELRVKARQFVEEFNSLLPARGEGSRAEHAAGEHLLVS
Ga0126378_124405242	3300010361	Tropical Forest Soil	VLIDLAAICQKLSESSALPEDLRGRARQLVEEFNLLLPYRGKGTEVQHFHGEKLLEKMARFLPRVLEVQAEPAVITRE*
Ga0126379_118792311	3300010366	Tropical Forest Soil	METALSSNEAKNEMLVMVLIDLAAICKKLAENSALPEHLRVKARELVEEFNVLLPHRGKGTEVHHFRGEKLLEKIARFLPRVLEVQAEPAVITRE*
Ga0126379_129773661	3300010366	Tropical Forest Soil	MVTKESKNEMLVMVLTDQAAICQKLVDNSAVPEGLRVQARDLEGEFNSLLPVRGKGTAAQHYEGEQLIIRITRFLPRVLEVRAEPAVARD*
Ga0126379_134867871	3300010366	Tropical Forest Soil	MTSNDAKNEMLVMVLTDLAAICQKRAENSAVPEELRVQARRFVEEFNSLLPYRGKGTARQHFLGEDLIIKITRFLQRVLEVQAAPALPEE*
Ga0134125_114499442	3300010371	Terrestrial Soil	ESAMTSMESKNEMLVMVLIDLAEICKKLADNSAVPDTLRAEARKFREEFDSLLPDRGKGTPAQHAQAETLVIRIARFLPKVVEGVQAAPRSHVA*
Ga0126381_1017216972	3300010376	Tropical Forest Soil	MLVMALTDLAGICKKLAENSAVPENLRVKAREFVQEFDSLSPYCGKGTIVQHAQGEMLLTSMARFVPRAVEEVQARQDFGAGA*
Ga0126381_1031138021	3300010376	Tropical Forest Soil	MISNASKNEMEVMVLSDLAAICKKLAENSATPEPLRAKAYEFVEEFNSLLPACGKGTADMHFAGEQLLTKIARFLPRVTEVHAEPAIPRKD*
Ga0126383_102101152	3300010398	Tropical Forest Soil	MTSNDAKNEMLVTVLTDLAEICKKLTDNSAVPETLRVQARQFVAEFNSVAPYRGKGTAAQHAQGEARLVRIARFLPTVL
Ga0126383_117340051	3300010398	Tropical Forest Soil	LAAICQKRAENSAVPEELRVQARRFVEEFNSLLPYRGKGTARQHFLGEDLIIKITRFLQRVLEVQAAPALPEE*
Ga0126383_122465021	3300010398	Tropical Forest Soil	MTSNESKNEMLVMVLIDLAGICRKLEENSAVPAELRTQAGKFVAEFDALLPHRGKGTPVQHQQGEMLLTKIARFLPRLIEVQA
Ga0134122_100213662	3300010400	Terrestrial Soil	MESKNEMLVMVLIDLAEICKKLADNSAVPDTLRAEARKFREEFDSLLPDRGKGTPAQHAQAETLVIRIARFLPKVVEGVQAAPRSHVA*
Ga0126369_101816982	3300012971	Tropical Forest Soil	MPEMLVIVLTDLAAICEKLTKHPAVLGDLRLKAGKFVAEFNSLLPVRSKGKADEHAQGEHLLIAMARFLTRVVDVQAEPAIPQDHLRPIM*
Ga0126369_102086042	3300012971	Tropical Forest Soil	MATMESKNEMLVMVVTDLAAICKKLAEHPALPENLRRQAREFGEEFDSLLAYAGKGTATQHFQGEALLTRMARFLPGVLNVKAETTTASQKSA*
Ga0157378_101127702	3300013297	Miscanthus Rhizosphere	MTSMESKNEMLVMVLIDLAEICKKLADNSAVPDTLRAEARKLREEFDSLLPDRGKGTPAQHAQAETLVIRIARFLPKVVEGVQAAPRSHVA*
Ga0182033_104567992	3300016319	Soil	MTTAESRNEMLVMVLTDLAAICKKLAESPAFPENLRVRAHEFVLEFNSLVPVRGKGTAAQHFQGEQLIVKIARFLPRILEVQAYPARQ
Ga0182033_114596981	3300016319	Soil	LREAVMSSNESKNEMLVMVVTDLAAICKKLGENSAVPEELRTKARHFVDEFNLLEPYRGRGSAYQHFAGEKLLEKMALLLPRLLEVQAQPAIASGE
Ga0182033_116175982	3300016319	Soil	YVRGGGATMATNEEKNEMLVMVLSDLAAICKKLSENSAVTEHLRTEAGQFVEEFNSLAPYRGSGTPAQHFRGENLLVRIGRFLPRLLEVQAAPARSGN
Ga0182035_106697142	3300016341	Soil	MATNEEKNEMLVMVLSDLAAICKKLSENSAVTEHLRTEAGQFVEEFNSLAPYRGQGTPAQHFRGENLLVRIGRFLPRLLEVQAAPARSGN
Ga0182032_115468091	3300016357	Soil	VMVLTDLSAICDKLIDHPAVPNELRQRTSDFVTEFNSLSPVRGKGNPYQHVQGQELLIKIARFLPRLLEVHAEPARVSNG
Ga0182034_117871641	3300016371	Soil	MATNEEKNEMLVMVLSDLAAICKKLSENSAVTEHLRTEAGQFVEEFNSLAPYRGSGTPAQHFRGENLMVRIARFLPRLLEVQAVPARSGN
Ga0182037_102732893	3300016404	Soil	MSSNQAKNEVEVMVLSDLAAICKKLSENSAVPEHLRKEANEFVEEFNSLAPYRGQGTPAQHFRGENLLVRIGRFLPRLLEVQAAPARSGN
Ga0182037_115714401	3300016404	Soil	MASNESKNEMLVMVLTDLSDICDKLIDHPAVPNELRQRTSDFVTEFNSLSPVRGKGNPYQHVQGQELLIKIARFLPRLLEVHAEPARVSNG
Ga0182039_113335122	3300016422	Soil	MLVMVLTDLSAICKKLTENSAVPEELRVRAREFVTEFDTLLQAGGKGTAGQHFQGEELLIKITRFLPRVLEVQAEPATVPKE
Ga0187779_100016365	3300017959	Tropical Peatland	MASPESKNEMLVMVLTDLSAICQKLTENSAVPEHLRVRAAEFVMEFNTLLPARERGTAAQHAQGEQLLIKIARFLPRVLEVQAEPATAPKQ
Ga0187783_106544631	3300017970	Tropical Peatland	MGGDTSAFKAVTMTSSESTNEMLVIVLTDLAAICKKLADNSILPEELRMQARLFVAEFNFLLPFQGKGTASQLCAGEVLLIRIARFLPRVLEVDARPRSNVA
Ga0187781_111659571	3300017972	Tropical Peatland	MATNEAKNELLVMVLSDLAAICKKVSEYSAVPEQLRTQASQFVEEFNSLLPYRGRGTPVQHFQGEALLIAMARFLPRLLEVQAKPARSGN
Ga0187780_104721802	3300017973	Tropical Peatland	MTSNELKNEMLVTVLTDLAAICRRLADNQILPEEVRGEARQCVWEFNELLPYRGKGNAFQHCEGETLLIRIARFLPRVLEVQAEPAIREQ
Ga0187787_102097232	3300018029	Tropical Peatland	MASSESKNEMLVMVLTDLAGICKKLTGNAAVPEELRAKARQFGEEFNSLLPVRGEGTAAQHAHGEQLLIKIARFLPRVLEVQAEPATVRKE
Ga0187788_100228784	3300018032	Tropical Peatland	MASSESKNEMLVMVLTDLAGICKKLTGNAAVPEELRAKARQFGEEFNSLLPVRGEGTAAQHAHGEQLLIKIARFLPRVL
Ga0187784_107836331	3300018062	Tropical Peatland	MATNEAKNELLVMVLSDLAAICKKVSEYSAVPEQLRTQASQFVEEFNSLLPYRGRGTPAQHFQGEALLGKMARFLPRLLDVQAAPAS
Ga0187773_104168092	3300018064	Tropical Peatland	MASPESKNEMLVMVLTDLSAICQKLTESAAVPEHLRVRAAEFVMEFNTLLPARERGTAAQHFQGEGLLTKIARFLPRVLEVQAEPATAPKE
Ga0187769_101071261	3300018086	Tropical Peatland	MASSESKNEMLVMVLTDLSAICKKLTESSAVPEGLRVQARQFVKEFDSLVPFRGKGTAYQHFQGEDLLIRMARFLPRVLEVQAGPATVPKE
Ga0187774_109857202	3300018089	Tropical Peatland	MEITMASTESKNEMLVMVLTDLAAICQKVAESSAVPEELRVKARQFGEEFNSLLPSRGKGTAAQHAQGEKLLAKIARFLPRLLEVQVEPATVAKE
Ga0126371_100085599	3300021560	Tropical Forest Soil	MNSNEAKNEMLVGVLIDLAAICQKLAENSAVPEELRVKARYLVEEFDSLAPYRGKGSADQHFQGEKRVEKIARFLPRLLEVQAQPAVVQRD
Ga0126371_100339584	3300021560	Tropical Forest Soil	MASNESKNEMLVMVLTDLSAICDKLIDHPAVPNELRLRASDFVTEFNSLSPVRGKGNPYQHVQGQELLIKVARFLPRLLEVHAEPARVSNG
Ga0126371_101238172	3300021560	Tropical Forest Soil	VTSNESKNEMLVMVLTDLAAICQKRAENSAVPEELRVQARRFVEEFNSLLPYRGKGTARQHFLGEDLIIKITRFLQRVLEVQAAPALPEE
Ga0126371_101559612	3300021560	Tropical Forest Soil	MRVSMESKNEMEVMVVTDLAAICRKLAENEALPEALQTKAREFVEEFESLLPSRGEGTAFQHARGEQLLIKIARFLPRVVEVEARPRETVTGQ
Ga0126371_102109391	3300021560	Tropical Forest Soil	MSSNESKNEMLVMVLIDLAAICEKLSENSAVPEHLRVKARQLVEEFNLLLPHRGKGTEVHHFQGEKLLEKIARFLPRVLEVQAEPTVVTRE
Ga0126371_115852492	3300021560	Tropical Forest Soil	MPSNESKNEMLVGVLIDLAAICQKLSESSALPEDLRGRARQLVEEFNLLLPYRGKGTEVQHFHGEKLLEKMARFLPRVLEVQAEPAVITRE
Ga0126371_120676961	3300021560	Tropical Forest Soil	MPSMEAKNEMLVMVLTDLSAVCKKLSEHSALPEQLRLRAGELAMEFNALLPARGKGTESQHFQAEELLHKIARFLPRVLEVQAQPAVRRQ
Ga0126371_123258092	3300021560	Tropical Forest Soil	MEITMASSESKNEMLVMVLTDLAEIYQKLVESPAVPEELRVKARQFREEFDSLLPYPGKGNAAQHSQGEQLLVKIARFLPRLLEVQAEPASVWNRDFSTAA
Ga0126371_130181841	3300021560	Tropical Forest Soil	MSSNESKNEMLVMVLTDLAAICKKLADNVGVPEELQMKARDLVEEFDSLAPYRGKGTSSQHFEGEQLIQKIARFLPRLLEVQ
Ga0207654_100161745	3300025911	Corn Rhizosphere	MESKNEMLVMVLIDLAEICKKLADNSAVPDTLRAEARKFREEFDSLLPDRGKGTPAQHAQAETLVIRIARFLPKVVEGVQAAPRSHVA
Ga0207826_12007701	3300027680	Tropical Forest Soil	ESKNEMLVMVLTDLAAICNKLSENSAVPEGLRVKAREFVAEFNSLLPVRGKGTAAQHAQGEQLLIKIARFLPRVLEVHAEPATAPRE
Ga0318541_101698222	3300031545	Soil	MTTSESRNEMLVMVLTDLAAICKKLAESPAFPENLRVRAHEFVLEFNSLVPVRGKGTAAQHFQGEQLIVKIARFLPRILEVQAYPARQ
Ga0310915_112418311	3300031573	Soil	AICKKLAESPAFPENLRVRAHEFVLEFNSLVPVRGKGTAAQHFQGEQLIVKIARFLPRILEVQAYPARQ
Ga0318560_103758742	3300031682	Soil	LVMVLTDLAAICKKLAESPAFPENLRVRAHEFVLEFNSLVPVRGKGTAAQHFQGEQLIVKIARFLPRILEVQAYPARQ
Ga0307469_100852011	3300031720	Hardwood Forest Soil	MTSNDAKNEMLVMVLTDLAGICKKLEENSAVPKKLRVEAREFGEEFDSLSPYRGKGTPAQHAQGEQLLVKIALFLPRVLAVQAQPRSNVA
Ga0306925_109151062	3300031890	Soil	MSSNESKNEMLVMVVTDLAAICKKLGENSAVPEELRTKARHFVDEFNLLEPYRGRGSAYQHFAGEKLLEKMALLLPRLLEVQAQPAIASGE
Ga0310912_103566423	3300031941	Soil	MAANEEKNEMLVMVLSDLAAICKKLSENSAVPEHLRKEANEFVEEFNSLAPYRGQGTPAQHFRGENLLVRIGRFLPRLLEVQAAPARSGN
Ga0310912_114108442	3300031941	Soil	MTSNQAKNEMLVMVLTDLAAICKKLADSSAVPEELRARARQFVAEFDLLLPYRGRGTAAHHAEGEQLLQKIARFLPRVIEIRALPAVAQRD
Ga0310916_104167302	3300031942	Soil	MVLTDLAAICKKLAESPAFPENLRVRAHEFVLEFNSLVPVRGKGTAAQHFQGEQLIVKIARFLPRILEVQAYPARQ
Ga0310909_104699671	3300031947	Soil	TVTAMTTSESRNEMLVMVLTDLAAICKKLAESPAFPENLRVRAHEFVLEFNSLVPVRGKGTAAQHFQGEQLIVKIARFLPRILEVQAYPARQ
Ga0310909_113462172	3300031947	Soil	LEITMASNESKNEMLVMVLTDLSAICDKLIDHPAVPNELRQRTSDFVTEFNSLSPVRGKGNPYQHVQGQELLIKIARFLPRLLEVHAEPARVSNG
Ga0306922_117098162	3300032001	Soil	MLVMVLTDLAAICKKLAESPAFPENLRVRAHEFVLEFNSLVPVRGKGTAAQHFQGEQLIVKIARFLPRILEVQAYPARQ
Ga0306924_106783881	3300032076	Soil	VMVVTDLAAICKKLGENSAVPEELRTKARHFVDEFNLLEPYRGRGSAYQHFAGEKLLEKMALLLPRLLEVQAQPAIASGE
Ga0306924_117836562	3300032076	Soil	MTSNESKNEMLVMVVTDLAAICQKLAENSAVPEDLRVQARRFGEEFNSLLPYRGKGDAAQHVQGEQLLVKIARFL
Ga0306924_124947991	3300032076	Soil	MTSNQAKNEMLVMVLTDLAAICKKLADSSAVPEELRARARQFVAEFDLLLPYRGRGTAAHHAEGEQLLQKIA
Ga0307472_1000840002	3300032205	Hardwood Forest Soil	MTSVEPKNEMLVMVLIDLAEICKKLADNSAVPDTLRAEARKFREEFDSLLPDRGKGTPAQHAQAETLVIRIARFLPKVVEGVQAAPRSHVA
Ga0306920_1001456977	3300032261	Soil	MAANEEKNEMLVMVLSDLAAICKKLSENSAVTEHLRTEAGQFVEEFNSLAPYRGQGTPAQHFRGENLLVRIGRFLPRLLEVQAAPARSGN
Ga0306920_1003296261	3300032261	Soil	MTSNESKNEMLVMVVTDLAAICQKLAENSAVPEDLRVQARRFGEEFNSLLPYRGKGDAAQHVQGEQLLVKIARFLPRVLEINAEPAVPRE
Ga0306920_1011013522	3300032261	Soil	VTDLAAICKKLGENSAVPEELRTKARHFVDEFNLLEPYRGRGSAYQHFAGEKLLEKMALLLPRLLEVQAQPAIASGE
Ga0335082_108999422	3300032782	Soil	VESKNEMLVMVLTDLTAICQKLTESSILSEELRLRAGHFVKEFNRLVPVRGKGNSYQHFEGEELLTKISRFLPRVLEVGARPGVLPHD
Ga0310914_113969342	3300033289	Soil	VATNEEKNEMLVMVLIDLAGICRKLEENSAVPAELRTQAGKYAAEFDVLLPHRGKGTPIQHDQGEALLTKIARFLPRLLEVQAKPAFLEEDIA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101770

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences