Basic Information | |
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Family ID | F101834 |
Family Type | Metagenome |
Number of Sequences | 102 |
Average Sequence Length | 91 residues |
Representative Sequence | AMGAKPEQVPDSSEIGGVKADGTSINASLGGEAGAAKIYWALVGQRVVVLTFFGPDKQMKQLAPGWDLIRTSLKVVDPKAVPAASPKPTP |
Number of Associated Samples | 79 |
Number of Associated Scaffolds | 102 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 0.98 % |
% of genes near scaffold ends (potentially truncated) | 94.12 % |
% of genes from short scaffolds (< 2000 bps) | 96.08 % |
Associated GOLD sequencing projects | 73 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.62 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (81.373 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (10.784 % of family members) |
Environment Ontology (ENVO) | Unclassified (53.922 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (66.667 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 13.56% β-sheet: 36.44% Coil/Unstructured: 50.00% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.62 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 102 Family Scaffolds |
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PF13366 | PDDEXK_3 | 46.08 |
PF07676 | PD40 | 9.80 |
PF01061 | ABC2_membrane | 2.94 |
PF00282 | Pyridoxal_deC | 2.94 |
PF00575 | S1 | 1.96 |
PF10150 | RNase_E_G | 0.98 |
COG ID | Name | Functional Category | % Frequency in 102 Family Scaffolds |
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COG0076 | Glutamate or tyrosine decarboxylase or a related PLP-dependent protein | Amino acid transport and metabolism [E] | 2.94 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 83.33 % |
Unclassified | root | N/A | 16.67 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000953|JGI11615J12901_10294874 | Not Available | 795 | Open in IMG/M |
3300003267|soilL1_10024522 | All Organisms → cellular organisms → Bacteria | 1861 | Open in IMG/M |
3300004114|Ga0062593_101805674 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 672 | Open in IMG/M |
3300004157|Ga0062590_101242285 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 729 | Open in IMG/M |
3300004157|Ga0062590_102868711 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 515 | Open in IMG/M |
3300004463|Ga0063356_102618740 | All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes | 774 | Open in IMG/M |
3300004480|Ga0062592_101462600 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia | 654 | Open in IMG/M |
3300005093|Ga0062594_101445519 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 701 | Open in IMG/M |
3300005294|Ga0065705_11080391 | Not Available | 527 | Open in IMG/M |
3300005295|Ga0065707_10169256 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia | 1480 | Open in IMG/M |
3300005295|Ga0065707_11008261 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 537 | Open in IMG/M |
3300005328|Ga0070676_10422169 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 932 | Open in IMG/M |
3300005334|Ga0068869_100264612 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1378 | Open in IMG/M |
3300005334|Ga0068869_100716020 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia | 855 | Open in IMG/M |
3300005336|Ga0070680_101929078 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 512 | Open in IMG/M |
3300005337|Ga0070682_100018829 | All Organisms → cellular organisms → Bacteria | 4043 | Open in IMG/M |
3300005354|Ga0070675_100543622 | Not Available | 1050 | Open in IMG/M |
3300005364|Ga0070673_101079844 | Not Available | 749 | Open in IMG/M |
3300005406|Ga0070703_10224007 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia | 750 | Open in IMG/M |
3300005543|Ga0070672_101349914 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia | 637 | Open in IMG/M |
3300005549|Ga0070704_100547238 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1011 | Open in IMG/M |
3300005549|Ga0070704_100907190 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 793 | Open in IMG/M |
3300005549|Ga0070704_102287069 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 503 | Open in IMG/M |
3300005577|Ga0068857_100560951 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1077 | Open in IMG/M |
3300005577|Ga0068857_100579252 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1059 | Open in IMG/M |
3300005578|Ga0068854_100204982 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1552 | Open in IMG/M |
3300005615|Ga0070702_100226853 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1252 | Open in IMG/M |
3300005617|Ga0068859_101441367 | Not Available | 760 | Open in IMG/M |
3300005617|Ga0068859_101705872 | Not Available | 696 | Open in IMG/M |
3300005617|Ga0068859_102796694 | All Organisms → cellular organisms → Bacteria | 536 | Open in IMG/M |
3300005618|Ga0068864_100784568 | Not Available | 935 | Open in IMG/M |
3300005618|Ga0068864_102507185 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 522 | Open in IMG/M |
3300005840|Ga0068870_10207542 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1191 | Open in IMG/M |
3300005844|Ga0068862_101143788 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 775 | Open in IMG/M |
3300005844|Ga0068862_101482242 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 683 | Open in IMG/M |
3300006169|Ga0082029_1170668 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 2007 | Open in IMG/M |
3300006804|Ga0079221_11259208 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales → Nostocaceae | 579 | Open in IMG/M |
3300006844|Ga0075428_101973518 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 605 | Open in IMG/M |
3300006854|Ga0075425_100157686 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 2603 | Open in IMG/M |
3300006871|Ga0075434_101010152 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia | 846 | Open in IMG/M |
3300006904|Ga0075424_102773172 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 511 | Open in IMG/M |
3300006954|Ga0079219_10857494 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2456 | 726 | Open in IMG/M |
3300007004|Ga0079218_10807542 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 903 | Open in IMG/M |
3300007004|Ga0079218_12312729 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 629 | Open in IMG/M |
3300009011|Ga0105251_10215846 | Not Available | 863 | Open in IMG/M |
3300009094|Ga0111539_11171816 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 893 | Open in IMG/M |
3300009100|Ga0075418_10814109 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1008 | Open in IMG/M |
3300009156|Ga0111538_10616856 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 1375 | Open in IMG/M |
3300009174|Ga0105241_11441203 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 661 | Open in IMG/M |
3300009174|Ga0105241_12133451 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 554 | Open in IMG/M |
3300009174|Ga0105241_12224459 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 544 | Open in IMG/M |
3300009177|Ga0105248_11065215 | Not Available | 914 | Open in IMG/M |
3300009177|Ga0105248_12570721 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 580 | Open in IMG/M |
3300009545|Ga0105237_11648474 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia | 648 | Open in IMG/M |
3300009551|Ga0105238_12349361 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 568 | Open in IMG/M |
3300010036|Ga0126305_10075199 | All Organisms → cellular organisms → Bacteria | 1978 | Open in IMG/M |
3300010036|Ga0126305_10225031 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1198 | Open in IMG/M |
3300010037|Ga0126304_10226601 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1226 | Open in IMG/M |
3300010037|Ga0126304_10883836 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 607 | Open in IMG/M |
3300010039|Ga0126309_10578893 | Not Available | 703 | Open in IMG/M |
3300010040|Ga0126308_10579976 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 763 | Open in IMG/M |
3300010040|Ga0126308_11283188 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 520 | Open in IMG/M |
3300010041|Ga0126312_10474461 | Not Available | 894 | Open in IMG/M |
3300010044|Ga0126310_10716540 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 760 | Open in IMG/M |
3300010045|Ga0126311_10515255 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 937 | Open in IMG/M |
3300010045|Ga0126311_11928063 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 502 | Open in IMG/M |
3300010373|Ga0134128_10240253 | All Organisms → cellular organisms → Bacteria | 2033 | Open in IMG/M |
3300010373|Ga0134128_11594479 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 718 | Open in IMG/M |
3300010397|Ga0134124_10726405 | All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2456 | 985 | Open in IMG/M |
3300010397|Ga0134124_10811154 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 936 | Open in IMG/M |
3300010400|Ga0134122_10786391 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 906 | Open in IMG/M |
3300011119|Ga0105246_10588440 | Not Available | 960 | Open in IMG/M |
3300012212|Ga0150985_107348120 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 932 | Open in IMG/M |
3300012986|Ga0164304_11610292 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 541 | Open in IMG/M |
3300013102|Ga0157371_10483999 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 912 | Open in IMG/M |
3300013102|Ga0157371_10662990 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 779 | Open in IMG/M |
3300013297|Ga0157378_12226001 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 599 | Open in IMG/M |
3300013306|Ga0163162_12232944 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 628 | Open in IMG/M |
3300013307|Ga0157372_10985320 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 977 | Open in IMG/M |
3300013308|Ga0157375_12355376 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia | 635 | Open in IMG/M |
3300013308|Ga0157375_12596703 | Not Available | 605 | Open in IMG/M |
3300014325|Ga0163163_10868753 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 965 | Open in IMG/M |
3300014745|Ga0157377_11126704 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia | 603 | Open in IMG/M |
3300014969|Ga0157376_12181165 | Not Available | 593 | Open in IMG/M |
3300015245|Ga0137409_11257425 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 582 | Open in IMG/M |
3300015373|Ga0132257_101911012 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 764 | Open in IMG/M |
3300015374|Ga0132255_105015123 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 561 | Open in IMG/M |
3300024182|Ga0247669_1047684 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 713 | Open in IMG/M |
3300025911|Ga0207654_11175769 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 559 | Open in IMG/M |
3300025913|Ga0207695_11582449 | Not Available | 536 | Open in IMG/M |
3300025914|Ga0207671_11482571 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia | 524 | Open in IMG/M |
3300025923|Ga0207681_11035367 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 689 | Open in IMG/M |
3300025935|Ga0207709_10745126 | Not Available | 787 | Open in IMG/M |
3300025940|Ga0207691_10991647 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia | 701 | Open in IMG/M |
3300026095|Ga0207676_10197212 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 1776 | Open in IMG/M |
3300026116|Ga0207674_10469101 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia | 1217 | Open in IMG/M |
3300026116|Ga0207674_12212220 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 513 | Open in IMG/M |
3300028380|Ga0268265_11845213 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 611 | Open in IMG/M |
3300032002|Ga0307416_102019813 | Not Available | 679 | Open in IMG/M |
3300032004|Ga0307414_11759113 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 578 | Open in IMG/M |
3300032005|Ga0307411_10731423 | All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium | 865 | Open in IMG/M |
3300034820|Ga0373959_0100881 | All Organisms → cellular organisms → Bacteria → Acidobacteria | 687 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 10.78% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 8.82% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 7.84% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 6.86% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 4.90% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 4.90% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 4.90% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 4.90% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 4.90% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 3.92% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 3.92% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.94% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 2.94% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 2.94% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 2.94% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 2.94% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 1.96% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 1.96% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.96% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 1.96% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 0.98% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 0.98% |
Termite Nest | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest | 0.98% |
Sugarcane Root And Bulk Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil | 0.98% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 0.98% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 0.98% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 0.98% |
Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.98% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.98% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.98% |
Rhizosphere Soil | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil | 0.98% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000953 | Soil microbial communities from Great Prairies - Kansas Corn soil | Environmental | Open in IMG/M |
3300003267 | Sugarcane bulk soil Sample L1 | Environmental | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004157 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2 | Environmental | Open in IMG/M |
3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
3300004480 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4 | Environmental | Open in IMG/M |
3300005093 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks | Environmental | Open in IMG/M |
3300005294 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil | Environmental | Open in IMG/M |
3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005336 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG | Environmental | Open in IMG/M |
3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
3300005354 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG | Host-Associated | Open in IMG/M |
3300005364 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG | Host-Associated | Open in IMG/M |
3300005406 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG | Environmental | Open in IMG/M |
3300005543 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG | Host-Associated | Open in IMG/M |
3300005549 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG | Environmental | Open in IMG/M |
3300005577 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 | Host-Associated | Open in IMG/M |
3300005578 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 | Host-Associated | Open in IMG/M |
3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
3300005840 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 | Host-Associated | Open in IMG/M |
3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
3300006169 | Termite nest microbial communities from Madurai, India | Environmental | Open in IMG/M |
3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006904 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3 | Host-Associated | Open in IMG/M |
3300006954 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control | Environmental | Open in IMG/M |
3300007004 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost | Environmental | Open in IMG/M |
3300009011 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG | Host-Associated | Open in IMG/M |
3300009094 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
3300009156 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2) | Host-Associated | Open in IMG/M |
3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
3300010036 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26 | Environmental | Open in IMG/M |
3300010037 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25 | Environmental | Open in IMG/M |
3300010039 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56 | Environmental | Open in IMG/M |
3300010040 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55 | Environmental | Open in IMG/M |
3300010041 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A | Environmental | Open in IMG/M |
3300010044 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60 | Environmental | Open in IMG/M |
3300010045 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61 | Environmental | Open in IMG/M |
3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
3300010397 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4 | Environmental | Open in IMG/M |
3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
3300012986 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG | Environmental | Open in IMG/M |
3300013102 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG | Host-Associated | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300013307 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
3300015245 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
3300024182 | Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10 | Environmental | Open in IMG/M |
3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025914 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025923 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025940 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026116 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300032002 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 | Host-Associated | Open in IMG/M |
3300032004 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 | Host-Associated | Open in IMG/M |
3300032005 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 | Host-Associated | Open in IMG/M |
3300034820 | Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 | Host-Associated | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI11615J12901_102948741 | 3300000953 | Soil | GVKADGVNISASLGGEAGAAKIYWAVVGQRVVVMTYFGPDKQMKQLMPAWDLVRTSLKIVDPKAAPAASPKASP* |
soilL1_100245223 | 3300003267 | Sugarcane Root And Bulk Soil | EIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLAPGWDLIRTSLKVVDPKAVPAASPKATP* |
Ga0062593_1018056742 | 3300004114 | Soil | KAFIDPYVAATAKQFVAMGAKPEQTPDTSEIGGMKADGVNISASLGGELGAAKIYWAIVGQRVVVMTFFGPDKQMKQLAPGWDLVRTSLKVMEPKATASPKPSP* |
Ga0062590_1012422852 | 3300004157 | Soil | EIGGVKADGVNIAASLGGETGAAKIYWALVGQRVVVLTFFGPDKQIKQLTPAWDVIRNSIQVFDPKAAPSATPKPSPE* |
Ga0062590_1028687111 | 3300004157 | Soil | DARKAFIDPFISATMKQFADMGAKPEQTPDSSEIGGVKADGVNISASLGGEPGAARIYWALINQRVVVLTYFGPDKQLKQLSPAWDLIRTSLKVVDPKAIPSPSPKAAP* |
Ga0063356_1026187402 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MKQFVDMGAKPEQTPDTSEIGGVKADGTIITASLGGEPGAARIYWALIGQRVVVLTYFGPDKQLKQLSPAWDLIRTSLKVVDPKATPSPAAKASPSP* |
Ga0062592_1014626001 | 3300004480 | Soil | VPDSSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP* |
Ga0062594_1014455191 | 3300005093 | Soil | MGAKPEQSPDTSEIGGVKADGVKIIASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQLAPAWDLVRTSLKVVDPKALPAASPKSSP* |
Ga0065705_110803912 | 3300005294 | Switchgrass Rhizosphere | SEIGGVKADGVNISASLGGEAGAAKIYWALVGQRVVVLTYFGPDKQMKQLMPAFDLIRTSLKVVDPKAATSPKPSP* |
Ga0065707_101692563 | 3300005295 | Switchgrass Rhizosphere | FIDPYIAATAKQFVAMGAKPEQVPDSSEIGGVKADGTSINASLAGEAGAAKIYWALVGQRVVVLTLFGPDKQVKQLAPAWDLIRTSLKVVDPKAVPAASPKNPL* |
Ga0065707_110082612 | 3300005295 | Switchgrass Rhizosphere | VVATAKQFVQMGAKPEQSPDTSEIGSVKADGVNISASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPAWDTIRNSIQVFDPKAAPKPSPE* |
Ga0070676_104221693 | 3300005328 | Miscanthus Rhizosphere | EKLPDAKKAFIDPYIAATAKQFVDMGAKPEQVPDSSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP* |
Ga0068869_1002646123 | 3300005334 | Miscanthus Rhizosphere | TAKQFVAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWAVVGQRVVVLTLFGPDKQIKQLTPAWDLVRTSLKVVDPKASPAATAKPSP* |
Ga0068869_1007160202 | 3300005334 | Miscanthus Rhizosphere | PDSSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP* |
Ga0070680_1019290782 | 3300005336 | Corn Rhizosphere | FIDPYIAATMKQFVAMGAKPEQSADSSEIAGLKAEGVKISASLGEPGAAKIYWALVGQRVVILTIFGPDREIKQFATAWDLVRSSFKVEDKAAPKPSPKP* |
Ga0070682_1000188291 | 3300005337 | Corn Rhizosphere | GAKTEQVPDSTEIAGLKADGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKELKQRAAVWDLVRTSLKIVDPKAVPTASPKP* |
Ga0070675_1005436223 | 3300005354 | Miscanthus Rhizosphere | KTEQVPDSTEIAGLKAEGTSVNASFGGGDTGAAKIYWALVGQRFVVLSLFGPDKEIKQRAAVWDLVRTSLKVVDPKAAVPAASPKASP* |
Ga0070673_1010798441 | 3300005364 | Switchgrass Rhizosphere | MKADGTSINASLDGETGAAKIYWAVVGQRVVVLTLFGPDKQIKQLTPAWDLVRTSLKVVDPKAAPAATPKP* |
Ga0070703_102240072 | 3300005406 | Corn, Switchgrass And Miscanthus Rhizosphere | PEKMADAKKALVDPLVAGNAKQFQAMRAQTEQVHDSTEIAGLKADGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKERKQRAAVWDLVRTSLKIVDPKAVPAASPKP* |
Ga0070672_1013499142 | 3300005543 | Miscanthus Rhizosphere | PDSTEIAGLKADGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKELKQRAAVWDLVRTSLKIVDPKAVPAASPKP* |
Ga0070704_1005472383 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | FVQMGAKPEKAPDTSEIGGVKADGVSINASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQDAPVWDLVRTSLKISDPKAAPSPKP* |
Ga0070704_1009071902 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | QFVQMGAKPEQSADTSEIGSVKAEGVNIAASLGGETGAAKIYWALVGQRVVVLTFFGPDKQIKQLTPAWDTIRNSIQVFDPKAAPKPSPE* |
Ga0070704_1022870692 | 3300005549 | Corn, Switchgrass And Miscanthus Rhizosphere | MGAKPEQSADSSEIAGLKADGVKVTANLGAPGAAKIYWALVGQHVVILTIFGPDDEIKQFTPAWDTVRSSLKVEDKAAPKPSPKP* |
Ga0068857_1005609511 | 3300005577 | Corn Rhizosphere | IDPYIAATAKQFVAMGAKPEQVPDSSEIGGVKADGTSINASLGGEAGAAKIYWALVGQRVVVLTFFGPDKQMKQLAPGWDLIRTSLKVVDPKAVPAASPKPTP* |
Ga0068857_1005792523 | 3300005577 | Corn Rhizosphere | ATAKQFVAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTLFGPDKQIKQLTPAWDLIRTSLKVVDPKAVPAASPKASP* |
Ga0068854_1002049821 | 3300005578 | Corn Rhizosphere | KPEPVADSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTPAWDLVRTSLKVVDPGAVPAASPKATP* |
Ga0070702_1002268531 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | AFIDPYIAATAKQFVAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWAVVGQRVVVLTLFGPDKQLKQLTPAWDLVRTSLKVVDPKAAPAATAKPSP* |
Ga0068859_1014413671 | 3300005617 | Switchgrass Rhizosphere | ETSEIGGVKADGTSINASLGGETGAAKIYWAVVGQRVVVLTLFGPDKQIKQLTPAWDLVRTSLKVVDPKAAPAATPKP* |
Ga0068859_1017058721 | 3300005617 | Switchgrass Rhizosphere | GVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTSAWDLVRTSLKVVDPGAAPAPSPKATP* |
Ga0068859_1027966942 | 3300005617 | Switchgrass Rhizosphere | KADGVKISASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQLAPAWDLVRTSLKVVDPKALPAASPKSSP* |
Ga0068864_1007845681 | 3300005618 | Switchgrass Rhizosphere | PETSEIGGMKADGTSINASLDGETGAAKIYWAVVGQRVVVLTLFGPDKQIKQLTPAWDLVRTSLKVVDPKAAPAATPKP* |
Ga0068864_1025071852 | 3300005618 | Switchgrass Rhizosphere | DPYIAATAKQFVAMGAKPEQVPDSSEIGGVKADGTSINASLGGEAGAAKIYWALVGQRVVVLTFFGPDKQMKQLAPGWDLIRTSLKVVDPKAVPAASPKPTP* |
Ga0068870_102075424 | 3300005840 | Miscanthus Rhizosphere | PDAKKAFIDPYVAATAKQFVAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTLFGPDKQIKQLTPAWDLIRTSLKVVDPKAVPAASPKASP* |
Ga0068862_1011437881 | 3300005844 | Switchgrass Rhizosphere | PYIAATAKQFVDMGAKPEQVPDSSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP* |
Ga0068862_1014822422 | 3300005844 | Switchgrass Rhizosphere | KAFIDPFISATMKQFADMGAKPEQTPDSSEIGGVKADGVNISASLGGEPGAARIYWALINQRVVVLTYFGPDKQLKQLSPAWDLIRTSLKVVDPKATPSPSPKAAP* |
Ga0082029_11706681 | 3300006169 | Termite Nest | ATAKQFVQMGAKPEQSPDTTEIGGIKADGVNITASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQLAPAWDLVRTSLKITDPKATPKPSPSP* |
Ga0079221_112592083 | 3300006804 | Agricultural Soil | EQSPDSSEIGGVKADGVKVSASLGGETGAAKIYWALVGQRVVVLTLFGPDKELQKQAAAWDLVRTSLKVIDPKAAASPKP* |
Ga0075428_1019735181 | 3300006844 | Populus Rhizosphere | KQFVSMGAKPEQTPDTSEIGGVKADGVNISASLGGEAGAAKIYWALVGQRVVVMTYFGPDKQMKQLSPAWDLIRTSLKVVDPKAAASPKPSP* |
Ga0075425_1001576862 | 3300006854 | Populus Rhizosphere | GAKPEQSPDTSEIGSVKADGVNISASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPAWDTIRNSIQVFDPKAAPKPSPE* |
Ga0075434_1010101521 | 3300006871 | Populus Rhizosphere | TEIGGVKAEGVNISASLGGETGAAKIYWVLMRQRVVVLTLFGPDKQIKQLSPAWDLVRTSLKIVDPKAAASPTP* |
Ga0075424_1027731722 | 3300006904 | Populus Rhizosphere | AMGAKTEQVPDSTEIAGLKADGTSVNASFGGETGAAKIYWALVGQRFVVLTLFGPDKELKQRAPVWDLVRTSLKIVDPKAVPAASPKASP* |
Ga0079219_108574941 | 3300006954 | Agricultural Soil | KPEQSPDSSEIGGAKADGVKITASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQIQKFAPAWDQVRTSLKVVDPKAASPKASP* |
Ga0079218_108075422 | 3300007004 | Agricultural Soil | MKQFVAMGAKPEQSADSSEIGGVKAEGVKIAANLGEPGAAKIYWATVGQRVVILTIFGPDREMKQFTPVWDTVRSTLKVED |
Ga0079218_123127291 | 3300007004 | Agricultural Soil | IDPYIAARTKQLQDMGAKTEQKPDSSEIGGVKADGVAISASMGGETGAAKIYWAIIGERVVVLTYFAPDNQAKQLTPAWDLIRTSLKVVDPKATPSPSPKASP* |
Ga0105251_102158461 | 3300009011 | Switchgrass Rhizosphere | QVPEISEVGGVKADGTSINASLGGETGAAKIYWAIVGQRVVVLTLFGPDKQLKQLTPAWDLVRTSLKVVDPKAAPAATAKPSP* |
Ga0111539_111718161 | 3300009094 | Populus Rhizosphere | QFVQMGAKPEQSPDTSEIGSVKADGVNISASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPAWDTIRNSIQVFDPKAAPKPSPE* |
Ga0075418_108141092 | 3300009100 | Populus Rhizosphere | EAKQKFIDPYIAATAKQFVQMGAKPEQVPDTSEIGGVKADGVSINASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQHAPVWDLVRTSLKISDPKAAPSPKP* |
Ga0111538_106168561 | 3300009156 | Populus Rhizosphere | MGAKPEQSPDTSEIGSVKADGVNISASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPAWDTIRNSIQVFDPKAAPKPSPE* |
Ga0105241_114412032 | 3300009174 | Corn Rhizosphere | DPYVAATAKQFVQMGAKPEQSPDTSEIGSVKADGVNISASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPAWDTIRNSIQVFDPKAAPKPSPE* |
Ga0105241_121334512 | 3300009174 | Corn Rhizosphere | AKQFVDMGAKPEQVADSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTSAWDLVRTSLKVVDPGAAPAPSPKATP* |
Ga0105241_122244592 | 3300009174 | Corn Rhizosphere | IDPYIAATSKQFIAMGAKPEQVADSSEIGGAKADGTIISASLGGEAGAAKIYWALVGQRVVVLTIFGPDKQMKQLTAVWDLVRTSLKVVDPKAVPAASPKAVP* |
Ga0105248_110652151 | 3300009177 | Switchgrass Rhizosphere | KPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWAVVGQRVVVLTLFGPDKQIKQLTPAWDLVRTSLKVVDPKAAPAATPKP* |
Ga0105248_125707211 | 3300009177 | Switchgrass Rhizosphere | TEKQFVAMGANPAQAPDTCEIGGVKADGVKITASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQFAPAWDLVRTSLKVVDPKAVPAASP* |
Ga0105237_116484741 | 3300009545 | Corn Rhizosphere | VPDSTEIAGLKADGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKELKQRAAVWDLIRTSLKIVDPKAVPAASPKP* |
Ga0105238_123493612 | 3300009551 | Corn Rhizosphere | APEKLPDAKKAFIDPYVAATAKQFVAMGAKPEQTPDTSEIGGMKADGVNISASLGGEAGAAKIYWAIVGQRVVVMTFFGPDKQMKQLAPGWDLVRTSLKVTDAKATASPKASP* |
Ga0126305_100751993 | 3300010036 | Serpentine Soil | GDKLADAKKAFIDPYIASTEKQFVAMGAKPEKTPDTSEIGSVKAEGVNIGASLAGEKGAAKIYWALVGQRVVVLTIFGPDKEMTKLAPAWDLIRNSLQVFDPKAAPEAAPKPTP* |
Ga0126305_102250311 | 3300010036 | Serpentine Soil | KAFIDPYVAATVKQFVAMGAKPEQVADSSEIGGTKADGTSINASLGGEAGAAKIYWAIVGQRVVVLTLFGPDKQMKQLTPAWDLVRTSLKVVDPKAVPAASPKASP* |
Ga0126304_102266011 | 3300010037 | Serpentine Soil | QSPDTSEIGGVKADGVIVSASLGGEAGAAKIYWAVVGQRVAVLTLFGPDKQTKQHTPAWDLVRTSLKINATPAATPKPSP* |
Ga0126304_108838361 | 3300010037 | Serpentine Soil | ASTEKQFVAMGAKPEKTPDTSEIGSVKAEGVNIGASLAGEKGAAKIYWALVGQRVVVLTIFGPDKEMTKLAPAWDLIRNSLQVVDPKAAPEAAPKPTP* |
Ga0126309_105788932 | 3300010039 | Serpentine Soil | VSINASLGGEPGAAKIYWALVGQRVAVLTVFGPDKQTKQLAAAWDLVRTSLKVQDPKATPTASPKPSP* |
Ga0126308_105799761 | 3300010040 | Serpentine Soil | KPEQSPDVSEIGGVKADGVSINASLGGESGAAKIYWALVGQRVAVLTLFGPDKQTKQLAAAWDLVRTSLKIQDSKATPAASPKP* |
Ga0126308_112831881 | 3300010040 | Serpentine Soil | IGGVKAEGVKISASLGEPGAAKIYWALVGQRVVLLTLFGPDRETKQLASAWDLVRTSLKVNDPKAAPAASPKP* |
Ga0126312_104744611 | 3300010041 | Serpentine Soil | KPEQTPDSSEIGGVKADGTNISASLAGEAGAAKIYWALVGQRVVVLTFFGPDAQTKKLSPVFDLVRTSLKVLDPKAMPSASPKASP* |
Ga0126310_107165402 | 3300010044 | Serpentine Soil | AATAKQFVAMGAKPEQSPDVSEIGGVKADGVSINASLGGEPGAAKIYWALVGQRVAVLTIFGPDKQTKQLAADWDLVRTSLKVQDPKATPTASPKPSP* |
Ga0126311_105152551 | 3300010045 | Serpentine Soil | QFVAMGAKPEQSPDVSEIGGVKADGVSINASLGGEPGAAKIYWALVGQRVAVLTIFGPDKQTKQLAAAWDLVRTSLKVQDPKATPAASPKPSP* |
Ga0126311_119280631 | 3300010045 | Serpentine Soil | GVKAEGVKISASLGEPGAAKIYWALVGQRVVLLTLFGPDRETKQLASAWDLVRTSLKVNDPKAAPAASPKP* |
Ga0134128_102402531 | 3300010373 | Terrestrial Soil | VAMGAKPEQVADTSEIGGVKADGTSINASLGGETGAAKIYWAVVGQRVVVLTLFGPDKQLKQLAPAWDLVRTSLKVVDPNASPAASPKTSPE* |
Ga0134128_115944792 | 3300010373 | Terrestrial Soil | QFVAMGAKPEQTPDATEIGGAKAEGVNISASLGGETGAAKIYWALLGQRVVVLTLFGPDKQIKQLSPAWDLVRTSLKVVDPKAVPAATAKPSP* |
Ga0134124_107264053 | 3300010397 | Terrestrial Soil | DSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLASAWELVRTSLKVVDPGAAPAPSPKATP* |
Ga0134124_108111541 | 3300010397 | Terrestrial Soil | AFIDPYIAATAKQFVAMGAKPEQVPETSEVGGVKADGTSINASLGGETGAAKIYWAIVGQRVVVLTLFGPDKQLKQLTPAWDLVRTSLKVVDPKAAPAATAKPSP* |
Ga0134122_107863911 | 3300010400 | Terrestrial Soil | AKKAFIDPYIAATAKQFVDMGAKPEQKPDTSEIGGVKADGVAISASLGGEAGAARIYWAIVGQRVVVMTIFGPDNQTKKLFPAWDLIRTTLKIVDPKATPSPSPKTSPSP* |
Ga0105246_105884401 | 3300011119 | Miscanthus Rhizosphere | KPEQVADSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTPIWDLVRTSLKVVDPGAVPAATPKATP* |
Ga0150985_1073481201 | 3300012212 | Avena Fatua Rhizosphere | PTQAPDTTEIGGAKADGVVISASLGGEAGAAKIYWALVGNRVVVLTFFGPNKELKQFLTAWDLIRTSLKIEDPKRLRNHHQSLS* |
Ga0164304_116102921 | 3300012986 | Soil | TAKQFVAMGAKPEQANDSTEIAGEKAEGVAITASLGGEPGAAKIYWALIGRRVVVLTYFGPDKELKQFASAWDMIRNSLKVEDPKAAPQASPMP* |
Ga0157371_104839991 | 3300013102 | Corn Rhizosphere | LPDAKKAFIDPYIASTEKQFVAMGAKPEQSPDTSEIGGVKADGVKISASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLQQLAPAWDLVRNRLKVVDPKAVPAASPKPSP* |
Ga0157371_106629902 | 3300013102 | Corn Rhizosphere | AFIDPYIAATTKQFVDMGAKPEQVADSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTPAWDLVRTSLKVVDPSAVPKATP* |
Ga0157378_122260012 | 3300013297 | Miscanthus Rhizosphere | MGAKPEQKPDTSEIGGVKADGVAISASLGGEAGAARIYWAIVGQRVVVMTIFGPDNQTKKLSPAWDLIRTSLKVVDPKATPSPSPKSSPE* |
Ga0163162_122329442 | 3300013306 | Switchgrass Rhizosphere | VAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWAVVGQRVVVLTLFGPDKQIKQLTPAWDLVRTSLKVVDPKAAPAASPKASP* |
Ga0157372_109853201 | 3300013307 | Corn Rhizosphere | MGAKPEQSPDTTEIGGVKADGVKISASLGGEPGAAKIYWALVGQRVAVLTLFGPDKQMKQLAPAWDLVRTSLKIVETKP* |
Ga0157375_123553762 | 3300013308 | Miscanthus Rhizosphere | TEQVPDSTEIAGLKAEGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKELKQRAAVWDLVRTSLKIVDPKAVPAASPKP* |
Ga0157375_125967032 | 3300013308 | Miscanthus Rhizosphere | VKADGVNISASLGGEPGAAKIYWALVGQRVVVMTFFGPDKQMKQLAPGWDLVRTSLKVTDAKATASPKASP* |
Ga0163163_108687531 | 3300014325 | Switchgrass Rhizosphere | VDPLIAGNAKQFVAMGAKTEQVPDNTEIAGLKAEGTSVNASFGSDTGATKIYWTLVGQRFVVLTLFGPDKELKQRAPVWDLVRTSLKVVDPKAAPAATPKP* |
Ga0157377_111267042 | 3300014745 | Miscanthus Rhizosphere | GGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP* |
Ga0157376_121811652 | 3300014969 | Miscanthus Rhizosphere | MSAEKMADAKKAVVDPLVAGNAKLFASMGAKTEQVPDSTEIAGIKADGTSVNASFGSDTGAAKIYWVLVGQRFVVLTLLGPDKELKQRAPVWDLVRTSLKVVDPKAVPAATAKPSP* |
Ga0137409_112574252 | 3300015245 | Vadose Zone Soil | EIGGVKADGVKIRAVLGDEPGAAQIFWVLAGKRVVVLTFFGPDKDLKQWTSAWDLVRGSLKIEEINPVPKPTPK* |
Ga0132257_1019110122 | 3300015373 | Arabidopsis Rhizosphere | GGAKAEGVNISASLGGETGAAKIYWALVGQRVVVLTLFGPDKQIKQLAPAWDVVRNSIQVFDPKAAPKPSPE* |
Ga0132255_1050151231 | 3300015374 | Arabidopsis Rhizosphere | KALVDPLIAGNAKQFVAMGAKTEQVPDSTEIAGLKADGTSVNAAFSGETGAAKIYWTLVGQRFVVLTLFGPDKEIKQRAAVWDLVRTSLKIVDPKAVPAASPKP* |
Ga0247669_10476841 | 3300024182 | Soil | KFADAKKSFIDPYIAATMKQFVAMGAKPEQSADSSEIAGMKADGVKISASLGEPGAAKIYWALMGQRVVILTVFGPDREIKQFAPAWDIVRSSLKIEDKAAPKPSPKP |
Ga0207654_111757691 | 3300025911 | Corn Rhizosphere | AATAKQFVDMGAKPEQVPDSSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP |
Ga0207695_115824492 | 3300025913 | Corn Rhizosphere | KPEQVADSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTPAWDLVRTSLKVVDPSAVPKATP |
Ga0207671_114825712 | 3300025914 | Corn Rhizosphere | VPDSTEIAGLKADGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKELKQRAAVWDLIRTSLKIVDPKAVPAASPKP |
Ga0207681_110353672 | 3300025923 | Switchgrass Rhizosphere | KQFVAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTLFGPDKQLKQLTPAWDLVRTSLKITDPKATPAASPKTSP |
Ga0207709_107451261 | 3300025935 | Miscanthus Rhizosphere | AKADGTIISASLGGEAGAAKIYWALVGQRVVVLTIFGPDKQMKQLTPVWDLVRTSLKVVDPKAIPAASPKAVP |
Ga0207691_109916472 | 3300025940 | Miscanthus Rhizosphere | PDSTEIAGLKADGTSVNASFGNETGAAKIYWALVGQRFVVLTLFGPDKELKQRAAVWDLVRTSLKIVDPKAVPAASPKP |
Ga0207676_101972124 | 3300026095 | Switchgrass Rhizosphere | GAKKAFIDPYIAATAKQFVDMGAKPEQVADSSEIGGVKAEGTSINASLGGEAGAAKIYWALVGQRVVVLTLFGPDKQMKQLTPIWDLVRTSLKVVDPGAVPAASPKATP |
Ga0207674_104691011 | 3300026116 | Corn Rhizosphere | AMGAKPEQVPDSSEIGGVKADGTSINASLGGEAGAAKIYWALVGQRVVVLTFFGPDKQMKQLAPGWDLIRTSLKVVDPKAVPAASPKPTP |
Ga0207674_122122202 | 3300026116 | Corn Rhizosphere | ATAKQFVAMGAKPEQVPETSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTLFGPDKQIKQLTPAWDLIRTSLKVVDPKAVPAASPKASP |
Ga0268265_118452131 | 3300028380 | Switchgrass Rhizosphere | KKAFIDPYIAATAKQFVDMGAKPEQVPDSSEIGGVKADGTSINASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPGWDLIRTSLKVVDPKAVPAASPKATP |
Ga0307416_1020198132 | 3300032002 | Rhizosphere | QSPDTTEIGGIKADGVNITASLGGETGAAKIYWALVGQQVVVLTLFGPDKQLKQLAPAWDLVRTSLKITDPKATPAASPKTSP |
Ga0307414_117591131 | 3300032004 | Rhizosphere | MGAKPQQSPDVSEIGGVKADGVSIHASLGGDPGAAKIYWALVGQRVAVLTIFGPDKETKQLAPAWDLIRTSLKVTDPKAIPAASPKASP |
Ga0307411_107314232 | 3300032005 | Rhizosphere | FIDPYIAARTKQLQDVGAKTEQKPDSSEIGGVKADGVAISASMGNETGTAKIYWAIIGERVVVLTYFAPDNQIKQLTPAWDLIRTSLKVVNLKATPSPSPKPTPE |
Ga0373959_0100881_2_250 | 3300034820 | Rhizosphere Soil | PEQSPDTSEIGSVKADGVTISASLGGETGAAKIYWALVGQRVVVLTFFGPDKQMKQLTPAWDTIRNSIQVFDPKAAPKPSPE |
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