Metagenome Family F101934

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F101934
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	81 residues
Representative Sequence	SGMSDQQILDQFVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRVASPNGPPIDPETLARIEKDTANLD
Number of Associated Samples	83
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.99 %
% of genes near scaffold ends (potentially truncated)	99.02 %
% of genes from short scaffolds (< 2000 bps)	90.20 %
Associated GOLD sequencing projects	65
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere (8.823 % of family members)
Environment Ontology (ENVO)	Unclassified (69.608 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (78.431 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 62.50% β-sheet: 2.50% Coil/Unstructured: 35.00%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF13620	CarboxypepD_reg	13.73
PF00005	ABC_tran	8.82
PF03379	CcmB	1.96
PF00076	RRM_1	0.98
PF16327	CcmF_C	0.98
PF01578	Cytochrom_C_asm	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG2386	ABC-type transport system involved in cytochrome c biogenesis, permease component	Posttranslational modification, protein turnover, chaperones [O]	1.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.02 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	82.35 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	62.75 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	33.33 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	28.43 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	33.33 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	27.45 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	27.45 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	19.61 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.98 %
Unclassified	root	N/A	0.98 %

Name	Rank	Taxonomy	Distribution
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	27.45 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	19.61 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.98 %
Unclassified	root	N/A	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005327\|Ga0070658_11479718	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300005329\|Ga0070683_101788686	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005330\|Ga0070690_101029828	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	650	Open in IMG/M
3300005335\|Ga0070666_10733229	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	726	Open in IMG/M
3300005337\|Ga0070682_100752989	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	787	Open in IMG/M
3300005338\|Ga0068868_100981707	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	772	Open in IMG/M
3300005339\|Ga0070660_100611633	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	911	Open in IMG/M
3300005339\|Ga0070660_101037552	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300005344\|Ga0070661_100501097	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	972	Open in IMG/M
3300005355\|Ga0070671_100147412	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1987	Open in IMG/M
3300005366\|Ga0070659_101855539	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	540	Open in IMG/M
3300005458\|Ga0070681_10150703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2252	Open in IMG/M
3300005458\|Ga0070681_10830590	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	841	Open in IMG/M
3300005458\|Ga0070681_11390012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	625	Open in IMG/M
3300005458\|Ga0070681_11536176	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	591	Open in IMG/M
3300005459\|Ga0068867_100202266	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1590	Open in IMG/M
3300005459\|Ga0068867_102232890	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300005534\|Ga0070735_10589678	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	660	Open in IMG/M
3300005535\|Ga0070684_100556401	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1065	Open in IMG/M
3300005535\|Ga0070684_100795807	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	884	Open in IMG/M
3300005537\|Ga0070730_11059548	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	504	Open in IMG/M
3300005539\|Ga0068853_100329486	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1417	Open in IMG/M
3300005539\|Ga0068853_101391246	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	678	Open in IMG/M
3300005539\|Ga0068853_101791258	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300005547\|Ga0070693_101208239	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	581	Open in IMG/M
3300005563\|Ga0068855_100787136	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1012	Open in IMG/M
3300005563\|Ga0068855_102187254	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	555	Open in IMG/M
3300005614\|Ga0068856_102479194	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	525	Open in IMG/M
3300005841\|Ga0068863_100006643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	11353	Open in IMG/M
3300005842\|Ga0068858_102504687	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	510	Open in IMG/M
3300006050\|Ga0075028_100982864	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300006059\|Ga0075017_101136180	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300006163\|Ga0070715_10746947	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300006173\|Ga0070716_101068279	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300006237\|Ga0097621_100193278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1763	Open in IMG/M
3300006237\|Ga0097621_100905645	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	822	Open in IMG/M
3300006638\|Ga0075522_10133590	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1307	Open in IMG/M
3300006800\|Ga0066660_11453627	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	538	Open in IMG/M
3300006806\|Ga0079220_11459978	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300006881\|Ga0068865_100769057	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	828	Open in IMG/M
3300009093\|Ga0105240_11922347	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	615	Open in IMG/M
3300009098\|Ga0105245_10385402	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1397	Open in IMG/M
3300009101\|Ga0105247_10996372	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300009148\|Ga0105243_11505471	All Organisms → cellular organisms → Bacteria → Acidobacteria	697	Open in IMG/M
3300009176\|Ga0105242_11887879	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	637	Open in IMG/M
3300009176\|Ga0105242_12357463	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	579	Open in IMG/M
3300009177\|Ga0105248_13066435	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	532	Open in IMG/M
3300009545\|Ga0105237_10542977	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1169	Open in IMG/M
3300009545\|Ga0105237_11848715	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	612	Open in IMG/M
3300009551\|Ga0105238_10016990	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7386	Open in IMG/M
3300009553\|Ga0105249_11348326	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300010375\|Ga0105239_12326256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	624	Open in IMG/M
3300010400\|Ga0134122_10489716	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1110	Open in IMG/M
3300011119\|Ga0105246_10900918	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	793	Open in IMG/M
3300011119\|Ga0105246_10994245	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	759	Open in IMG/M
3300011120\|Ga0150983_13265612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	521	Open in IMG/M
3300012212\|Ga0150985_120016947	All Organisms → cellular organisms → Bacteria → Acidobacteria	1128	Open in IMG/M
3300012683\|Ga0137398_11235450	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300013296\|Ga0157374_10262008	All Organisms → cellular organisms → Bacteria	1703	Open in IMG/M
3300013296\|Ga0157374_10486716	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1237	Open in IMG/M
3300013296\|Ga0157374_11101902	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300013297\|Ga0157378_10237370	All Organisms → cellular organisms → Bacteria → Acidobacteria	1740	Open in IMG/M
3300013306\|Ga0163162_10016430	All Organisms → cellular organisms → Bacteria → Acidobacteria	7232	Open in IMG/M
3300013306\|Ga0163162_11918876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	678	Open in IMG/M
3300013308\|Ga0157375_10148561	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2477	Open in IMG/M
3300013308\|Ga0157375_10466149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1428	Open in IMG/M
3300014968\|Ga0157379_10194884	All Organisms → cellular organisms → Bacteria → Acidobacteria	1831	Open in IMG/M
3300015195\|Ga0167658_1011083	All Organisms → cellular organisms → Bacteria → Acidobacteria	2770	Open in IMG/M
3300015195\|Ga0167658_1035833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1283	Open in IMG/M
3300015203\|Ga0167650_1072265	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	824	Open in IMG/M
3300021178\|Ga0210408_10975756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	657	Open in IMG/M
3300025862\|Ga0209483_1095421	All Organisms → cellular organisms → Bacteria → Acidobacteria	1308	Open in IMG/M
3300025900\|Ga0207710_10160002	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1096	Open in IMG/M
3300025903\|Ga0207680_10787694	All Organisms → cellular organisms → Bacteria → Acidobacteria	682	Open in IMG/M
3300025911\|Ga0207654_11008995	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300025912\|Ga0207707_10819192	All Organisms → cellular organisms → Bacteria → Acidobacteria	774	Open in IMG/M
3300025913\|Ga0207695_11670896	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	518	Open in IMG/M
3300025919\|Ga0207657_10832401	All Organisms → cellular organisms → Bacteria → Acidobacteria	713	Open in IMG/M
3300025920\|Ga0207649_10446255	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	976	Open in IMG/M
3300025924\|Ga0207694_10900152	All Organisms → cellular organisms → Bacteria → Acidobacteria	748	Open in IMG/M
3300025927\|Ga0207687_10693895	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	863	Open in IMG/M
3300025931\|Ga0207644_10268054	All Organisms → cellular organisms → Bacteria → Acidobacteria	1367	Open in IMG/M
3300025934\|Ga0207686_11253101	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	608	Open in IMG/M
3300025935\|Ga0207709_11064716	All Organisms → cellular organisms → Bacteria → Acidobacteria	663	Open in IMG/M
3300025941\|Ga0207711_10867561	All Organisms → cellular organisms → Bacteria → Acidobacteria	840	Open in IMG/M
3300025942\|Ga0207689_10163571	All Organisms → cellular organisms → Bacteria → Acidobacteria	1833	Open in IMG/M
3300025981\|Ga0207640_11603723	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300026023\|Ga0207677_10207043	All Organisms → cellular organisms → Bacteria → Acidobacteria	1563	Open in IMG/M
3300026035\|Ga0207703_10065095	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2994	Open in IMG/M
3300026041\|Ga0207639_11601886	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300026088\|Ga0207641_10095924	All Organisms → cellular organisms → Bacteria → Acidobacteria	2604	Open in IMG/M
3300026089\|Ga0207648_10536006	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1074	Open in IMG/M
3300027535\|Ga0209734_1104865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	543	Open in IMG/M
3300027894\|Ga0209068_10563518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	661	Open in IMG/M
3300028381\|Ga0268264_10370652	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1368	Open in IMG/M
3300031057\|Ga0170834_109549363	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300031057\|Ga0170834_109562330	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	568	Open in IMG/M
3300031525\|Ga0302326_12772305	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300032421\|Ga0310812_10286157	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	730	Open in IMG/M
3300033412\|Ga0310810_10148278	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2728	Open in IMG/M
3300033475\|Ga0310811_11303574	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	578	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	63.73%
Environmental	Environmental	36.27%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	63.73%
Terrestrial	Environmental → Terrestrial	33.33%
Aquatic	Environmental → Aquatic	2.94%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.22%
Soil	Environmental → Terrestrial → Soil	32.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.55%
Sediment	Environmental → Aquatic → Sediment	2.94%
Roots	Host-Associated → Plants → Roots	1.96%
Peat	Environmental → Terrestrial → Peat	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	28.43%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	21.57%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	16.67%
Loam	Environmental → Terrestrial → Soil → Loam	15.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.78%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.96%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	28.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	21.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.78%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.94%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.96%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	8.82%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	8.82%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	7.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	7.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.88%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.92%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.94%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	2.94%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.96%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.98%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070658_114797182	3300005327	Corn Rhizosphere	VNMQKSGMSDQQILDQYVAENGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0070683_1017886861	3300005329	Corn Rhizosphere	DQYVAENGKDVLIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKAALNGPPIDAATLARIEKDTANLD*
Ga0070690_1010298282	3300005330	Switchgrass Rhizosphere	AKMVNMQKSGMSDQQILDRYVAENGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0070666_107332291	3300005335	Switchgrass Rhizosphere	MQKSGMSDQQILNQYVAENGKDILIVPPGIAGVLGPYVALTLGLLVVLWTIRRMMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0070682_1007529893	3300005337	Corn Rhizosphere	NGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRVASPNGPPIDPETLARIEKDTANLD*
Ga0068868_1009817071	3300005338	Miscanthus Rhizosphere	NGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0070660_1006116333	3300005339	Corn Rhizosphere	GKDILVVPPGIAGVLGPYVALTLGLGLVIWTIRRLMRPGPPSTNGPPIDPETLARIEKDTANLD*
Ga0070660_1010375521	3300005339	Corn Rhizosphere	MSDQQILDQFVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRVASPNGPPIDPETLARIEKDTANLD*
Ga0070661_1005010973	3300005344	Corn Rhizosphere	KAKMVNMQKSGMSDQQILDRFVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD*
Ga0070671_1001474121	3300005355	Switchgrass Rhizosphere	VCKTNKAKMVNMQKSGMSDQQILDQYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPKMASPNGPPVDPETLARIEKDTANLD*
Ga0070659_1018555391	3300005366	Corn Rhizosphere	GCNQTMACVMPPGCPVCKTNKAKMVNMQKSGMSDQQILDRFVAENGKDILVVPPGIAGVLGPDVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD*
Ga0070711_1006883813	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	YVALSLGFLLVLWTIRRYMRPRMVPSNVPPIDAATLARIEKDTANLD*
Ga0070681_101507034	3300005458	Corn Rhizosphere	LVVPPGIAGILGPYIALTLGLGLVIFTIRRLMRPKAASPNGPPIDPETLARIEKDTANLD
Ga0070681_108305901	3300005458	Corn Rhizosphere	AENGKDILVVPPGIAGVLGPYVALTLGLGLVIWTIRRLMRPGPASPNGPPIDPETLARIEKDTANLD*
Ga0070681_113900121	3300005458	Corn Rhizosphere	LDQYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIWTIRRLMRPGPSSPNGPPIDPETLARIEKDTANLD*
Ga0070681_115361761	3300005458	Corn Rhizosphere	KMVNMQKSGMSDQQILDRYVAENGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0068867_1002022661	3300005459	Miscanthus Rhizosphere	TNKAKMVNMQKSGMSDQQILDRYVAENGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0068867_1022328901	3300005459	Miscanthus Rhizosphere	IVPPGIAGVLGPYVALSLGFLLVLWTIRRLMRARVATPNGPPIDAATLARIEKDTANLD*
Ga0070735_105896781	3300005534	Surface Soil	CGCNQTMACVMPPGCPVCKMNKAKIVNMQKSGMSDQQILDQYVAENGKDILVIPPGIAGVLGPYVALTLGLGLVIWTIRRLMRPGPPSPNGPPVDPETLARIEKDTANLD*
Ga0070684_1005564013	3300005535	Corn Rhizosphere	IAGVLGPYVALSLGLLLVVWTIRRYMRPRKVAPDGPPIDAATLARIEKDTANLD*
Ga0070684_1007958073	3300005535	Corn Rhizosphere	VCKTNKAKMVNMQKSGMSDQQILNQYVAENGKDILVVPPGIAGVLGPYVALSLGFLLVLWTIRRLMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0070730_110595482	3300005537	Surface Soil	CQMPPGCPICKANKSKMVNMQKSGMSDQQILDQYVAENGKAILVIPPGIAGVLGPYVALSLGLGLVLLTIRRLMRPRMATPNGPPIDPETLARIEKDTANID*
Ga0068853_1003294863	3300005539	Corn Rhizosphere	SGMSDQQILDQFVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRVASPNGPPIDPETLARIEKDTANLD*
Ga0068853_1013912463	3300005539	Corn Rhizosphere	VAENGKDVLIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKAALNGPPIDAATLARIEKDTANLD*
Ga0068853_1017912582	3300005539	Corn Rhizosphere	DILVVPPGIAGVLGPYVALTLGLGLVIWTIRRLMRPGPPSPNGPPIDPETLARIEKDTANLD*
Ga0070693_1012082391	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	ILDRYVAENGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0068855_1007871363	3300005563	Corn Rhizosphere	PPGIAGVLGPYVALSLGFLLVLWTIRRLMRARVATPNGPPIDAATLARIEKDTANLD*
Ga0068855_1021872541	3300005563	Corn Rhizosphere	NQSMACVMPPGCPVCKMNKAKMVNMQKSGMSDQQILDQYVAENGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0068856_1024791941	3300005614	Corn Rhizosphere	GCPVCKMNKAKMVNMQKSGMSDQQILDQYVAENGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0068863_10000664317	3300005841	Switchgrass Rhizosphere	GMSDQQILDRYVAENGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0068858_1025046872	3300005842	Switchgrass Rhizosphere	KMVNMQKSGMSDQQILNQYVAENGKDILIVPPGIAGVLGPYVALTLGLLVVLWTIRRMMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0075028_1009828641	3300006050	Watersheds	IPPGIAGVLGPYVALSLGFLLVLWTIRRYMRPRIASPNGPPIDAATLARIEKDTANLD*
Ga0075017_1011361802	3300006059	Watersheds	MACVMPPGCPVCKMNKAKMVNMQKSGMSDQQILDQYVAENGKDVLVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRMASPNGPPIDPETLARIEKDTANLD*
Ga0070715_107469472	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MQKSGMSDQQILDQFVAENGKDVLVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD*
Ga0070716_1010682791	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MVNMQKSGMSDQQILDRFVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD*
Ga0097621_1001932784	3300006237	Miscanthus Rhizosphere	CVMPPGCPVCKTNKAKMVNMQKSGMSDQQILNQYVAENGKDILIVPPGIAGVLGPYVALSLGFLLVLWTIRRLMRARVATPNGPPIDAATLARIEKDTANLD*
Ga0097621_1009056451	3300006237	Miscanthus Rhizosphere	MNKAKMVNMQKSGMSDQQILDQYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPIDPETLARIEKDTANLD*
Ga0075522_101335901	3300006638	Arctic Peat Soil	GCPVCKMNKAKMVNMQKSGMSDQQILNQYVAENGKDILVVPPGIAGVLGPYVALSLGLGLVLWTIRRLMRPKTASPNGPPVDPETLARIEKDTANLD*
Ga0066660_114536271	3300006800	Soil	GCPVCKTNKAKMVNMQKSGMSDQQILDKFVAENGKDILVVPPGIAGALGPYVALSLGFLLVLWTIRRLMRPRMTSPNGPPIDAATLARIEKETANLE*
Ga0079220_114599782	3300006806	Agricultural Soil	CVMPPGCPVCKTNKAKMVNMQKSGMSDQQILDRFVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD*
Ga0068865_1007690573	3300006881	Miscanthus Rhizosphere	MQKSGMSDQQILDRYVAENGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0105240_119223471	3300009093	Corn Rhizosphere	AKMVNMQKSGMSDQQILNQYVAENGKDILIVPPGIAGVLGPYVALSLGFLLVLWTIRRLMRARVATPNGPPIDAATLARIEKDTANLD*
Ga0105245_103854021	3300009098	Miscanthus Rhizosphere	IAGVLGPYVALTLGLGLVIFTIRRLMRPRVASPNGPPIDPETLARIEKDTANLD*
Ga0105247_109963723	3300009101	Switchgrass Rhizosphere	GKDVLVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD*
Ga0105243_115054711	3300009148	Miscanthus Rhizosphere	DQQILNQYVAENGKDILIVPPGIAGVLGPYVALTLGLLVVLWTIRRLMRARVATPNGPPIDAATLARIEKDTANLD*
Ga0105242_118878791	3300009176	Miscanthus Rhizosphere	NQSMACVMPPGCPVCKTNKAKMVNMQKSGMSDQQILNQYVAENGKDILIVPPGIAGVLGPYVALSLGFLLVLWTIRRLMRARVATPNGPPIDAATLARIEKDTANLD*
Ga0105242_123574631	3300009176	Miscanthus Rhizosphere	AKMVNMQKSGMSDQQILNQYVAENGKDILIVPPGIAGVLGPYVALTLGLLVVLWTIRRMMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0105248_130664352	3300009177	Switchgrass Rhizosphere	CNQNMACVMPPGCPVCKTNKAKMVNMQKSGMSDQQILDQYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPKMASPNGPPVDPETLARIEKDTANLD*
Ga0105237_105429771	3300009545	Corn Rhizosphere	NMQKSGMSDQQILDQYVAESGKDVLIVPPGIAGVLGPYVALSLGLLLVVWTIRRYMRPRKVAPDGPPIDAATLARIEKDTANLD*
Ga0105237_118487152	3300009545	Corn Rhizosphere	CKTNKAKMVNMQKSGMSDQQILDRFVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD*
Ga0105238_100169901	3300009551	Corn Rhizosphere	NKAKMVNMQKSGMSDQQILDQYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRVASPNGPPIDPETLARIEKDTANLD*
Ga0105249_113483261	3300009553	Switchgrass Rhizosphere	MACQMPPGCPICKTNKAKMVNMQKSGMSDQQILDQYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD*
Ga0105239_123262562	3300010375	Corn Rhizosphere	MPAGCLVCKTNEANMFNMQKSGMSDQQILNQYVAENGKDILIVPPGIAGVLGPYVALTLGLLVVLWTIRRMMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0134122_104897163	3300010400	Terrestrial Soil	DQFVAENGKDVLVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD*
Ga0105246_109009181	3300011119	Miscanthus Rhizosphere	ILIVPPGIAGVLGPYVALSLGFLLVLWTIRRLMRARVATPNGPPIDAATLARIEKDTANLD*
Ga0105246_109942451	3300011119	Miscanthus Rhizosphere	GVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0150983_132656121	3300011120	Forest Soil	PVCKMNKAKMVNMQKSGMSDQQILDQYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVLFTIRRLMRPRAASPNGPPVDPETLARIEKDTANLD*
Ga0150985_1200169473	3300012212	Avena Fatua Rhizosphere	VMPPGCPVCKTNKAKMVNLQKAGMSDQQILDQYVAENGKDILVIPPGIAGVLGPYVALSLGFLLVLWTIRRYMRPRPASPNGPPVDPATLARIEKDTANLD*
Ga0137398_112354502	3300012683	Vadose Zone Soil	DKYVAENGKDILVIPPGIAGVLGPYVALSLGFLLVLWTIRRYMRPRMVPSNVPPIDAATLARIEKDTANLD*
Ga0157374_102620084	3300013296	Miscanthus Rhizosphere	QQILDQYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRVASPNGPPIDPETLARIEKDTANLD*
Ga0157374_104867161	3300013296	Miscanthus Rhizosphere	NKAKMVNMQKSGMSDQQILNQCVAENGKDILIVPPGIAGVWGPYVALTLGLLVVLWTIRRMMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0157374_111019021	3300013296	Miscanthus Rhizosphere	TNKAKMVNMQKSGMSDQQILDQYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIWTIRRLMRPGPPSPNGPPIDPETLARIEKDTANLD*
Ga0157378_102373704	3300013297	Miscanthus Rhizosphere	NQYVAENGKDILIVPPGIAGVLGPYVALSLGFLLVLWTIRRLMRARVATPNGPPIDAATLARIEKDTANLD*
Ga0163162_1001643012	3300013306	Switchgrass Rhizosphere	QYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD*
Ga0163162_119188761	3300013306	Switchgrass Rhizosphere	NQSMACVMPPGCPVCKTNKAKMVNMQKSGMSDQQILNQYVAENGKDILIVPPGIAGVLGPYVALTLGLLVVLWTIRRMMRPRKVALNGPPIDAATLARIEKDTANLD*
Ga0157375_101485615	3300013308	Miscanthus Rhizosphere	VPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPWAVSPNGPPVDPETLARIEKDTANLD*
Ga0157375_104661491	3300013308	Miscanthus Rhizosphere	MVNMQKSGMSDQQILDQYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPKMASPNGPPVDPETLARIEKDTANLD
Ga0157379_101948844	3300014968	Switchgrass Rhizosphere	VAENGKDVLVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD*
Ga0167658_10110831	3300015195	Glacier Forefield Soil	QKSGMSDRQILDQYVAENGKDILVIPPGIAGVLGPYVALSLGLLVVLWTIRRYMRPRVASLNGPPIDAATLARIEKDTANLD*
Ga0167658_10358331	3300015195	Glacier Forefield Soil	NMACVMPPGCPVCKTNKAKMVNLQKSGMSDQQILDQFVSESGKDILVVPPGIAGVLGPYVALTLGLGVVLFTIRRLMRPRIAAPNGPLIDPETLARIEKDTANLD*
Ga0167650_10722651	3300015203	Glacier Forefield Soil	PPGIAGVLGPYVALSLGFLLVLWTIRRYMRPRMAPSNVPPVDAATLARIEKDTANLD*
Ga0210408_109757563	3300021178	Soil	LDQYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRVASPNGAPVDPETLARIEKDTANLD
Ga0209483_10954213	3300025862	Arctic Peat Soil	GCPVCKMNKAKMVNMQKSGMSDQQILNQYVAENGKDILVVPPGIAGVLGPYVALSLGLGLVLWTIRRLMRPKTASPNGPPVDPETLARIEKDTANLD
Ga0207710_101600021	3300025900	Switchgrass Rhizosphere	GKDVLVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD
Ga0207680_107876941	3300025903	Switchgrass Rhizosphere	ILNQYVAENGKDILIVPPGIAGVLGPYVALTLGLLVVLWTIRRMMRPRKVALNGPPIDAATLARIEKDTANLD
Ga0207654_110089953	3300025911	Corn Rhizosphere	PYVALTLGLLLVVWTIRRYMRPRKAALNGPPIDAATLARIEKDTANLD
Ga0207707_108191923	3300025912	Corn Rhizosphere	GMSDQQILDQYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIWTIRRLMRPGPASPNGPPIDPETLARIEKDTANLD
Ga0207695_116708962	3300025913	Corn Rhizosphere	CVMPPGCPVCKMNKAKMVNMQKSGMSDQQILDQYVAENGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD
Ga0207657_108324011	3300025919	Corn Rhizosphere	PADQQILDQFVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRVASPNGPPIDPETLARIEKDTANLD
Ga0207649_104462553	3300025920	Corn Rhizosphere	KSGMSDQQILDRFVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD
Ga0207694_109001521	3300025924	Corn Rhizosphere	FVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRVASPNGPPIDPETLARIEKDTANLD
Ga0207687_106938951	3300025927	Miscanthus Rhizosphere	IAGVLGPYVALTLGLGLVIFTIRRLMRPRVASPNGPPIDPETLARIEKDTANLD
Ga0207644_102680543	3300025931	Switchgrass Rhizosphere	KTNKAKMVNMQKSGMSDQQILDQFVAENGKDVLVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD
Ga0207686_112531011	3300025934	Miscanthus Rhizosphere	NIACVMPPGCPVCKTNKAKMVNMQKSGMSDQQILDQYVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRVVSPNGPPVDPETLARIEKDTANLD
Ga0207709_110647163	3300025935	Miscanthus Rhizosphere	NGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD
Ga0207711_108675611	3300025941	Switchgrass Rhizosphere	CNQNMACVMPPGCPVCKTNKAKMVNMQKSGMSDQQILDQYVAENGKDIWVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPKMASPNGPPVDPETLARIEKDTANLD
Ga0207689_101635711	3300025942	Miscanthus Rhizosphere	ILIVPPGIAGVLGPYVALTLGLLVVLWTIRRMMRPRKVALNGPPIDAATLARIEKDTANL
Ga0207640_116037233	3300025981	Corn Rhizosphere	GIAGVLGPYVALTLGLGLVIWTIRRLMRPGPPSPNGPPIDPETLARIEKDTANLD
Ga0207677_102070434	3300026023	Miscanthus Rhizosphere	AENGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD
Ga0207703_100650956	3300026035	Switchgrass Rhizosphere	VLVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANL
Ga0207639_116018861	3300026041	Corn Rhizosphere	AENGKDILVVPPGIAGVLGPYVALTLGLGLVIWTIRRLMRPGPPSPNGPPIDPETLARIEKDTANLD
Ga0207641_100959245	3300026088	Switchgrass Rhizosphere	KSGMSDQQILDRYVAENGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKVALNGPPIDAATLARIEKDTANLD
Ga0207648_105360063	3300026089	Miscanthus Rhizosphere	DILIVPPGIAGVLGPYVALSLGFLLVLWTIRRLMRARVATPNGPPIDAATLARIEKDTANLD
Ga0209734_11048652	3300027535	Forest Soil	SGMSDRQILDKYVAENGKDILVIPPGIAGVLGPYVALSLGFLLVLWTIRRYMRPRMVPSNVPPIDAATLARIEKDTANLD
Ga0209068_105635181	3300027894	Watersheds	MVNMQKSGMSDQQILDQFVAENGKDVLVVPPGIAGVLGPYVALTFGLALVIFTIRRLMRPRLASPNGPPIDPDTLARIEKDTANLD
Ga0268264_103706521	3300028381	Switchgrass Rhizosphere	VCKTNKAKMVNMQKSGMSDQQILDRFVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPIDPETLARIEKDTANLD
Ga0170834_1095493631	3300031057	Forest Soil	IQYVAESGKDILIVPPGIAGVLGPYVALTLGLLLVVWTIRRYMRPRKAALNGPPIDAATLARIEKDTANLD
Ga0170834_1095623301	3300031057	Forest Soil	MVNMQKSGMSDQQILDQYVAENGKDVLVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRMAAPNGPPVDPETLARIEKDTANLD
Ga0302326_127723051	3300031525	Palsa	AENGKDVLIVPPGIAGVLGPYVALSLGLILVLWTIRRYMRPRPASPNGPPLDPATLARIEKDTANLD
Ga0310812_102861571	3300032421	Soil	MSDQQILDRFVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD
Ga0310810_101482785	3300033412	Soil	CGCNQNMACVMPPGCPVCKTNKAKMVNMQKSGMSDQQILDRFVAENGKDILVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPPVDPETLARIEKDTANLD
Ga0310811_113035742	3300033475	Soil	ACVMPPGCPVCKTNKAKMVNMQKSGMSDQQILDQFVAENGKDVLVVPPGIAGVLGPYVALTLGLGLVIFTIRRLMRPRAVSPNGPSVDPETLARIEKDTANLD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F101934

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences