Metagenome / Metatranscriptome Family F101976

Basic Information
Family ID	F101976
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	57 residues
Representative Sequence	VDVKPMPGLEHLPFAEVWFHAIDEERWREASAAARAIGKTGLEAWTTDRTPEVAAFLEAR
Number of Associated Samples	92
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	37.93 %
% of genes near scaffold ends (potentially truncated)	26.47 %
% of genes from short scaffolds (< 2000 bps)	25.49 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Most Common Taxonomy
Group	Unclassified (71.569 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.725 % of family members)
Environment Ontology (ENVO)	Unclassified (31.373 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.961 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.86% β-sheet: 14.77% Coil/Unstructured: 61.36%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
d.108.1.1: N-acetyl transferase, NAT	d1s3za1	1s3z	0.63634
d.159.1.2: 5'-nucleotidase (syn. UDP-sugar hydrolase), N-terminal domain	d2z1aa2	2z1a	0.6304
c.110.1.2: Archaea-specific editing domain of threonyl-tRNA synthetase (Pab-NTD)	d2hl0a_	2hl0	0.62811
d.108.1.1: N-acetyl transferase, NAT	d1tiqa1	1tiq	0.6151
d.108.1.1: N-acetyl transferase, NAT	d1mk4a1	1mk4	0.6126

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00664	ABC_membrane	17.65
PF00871	Acetate_kinase	10.78
PF14333	DUF4389	4.90
PF08448	PAS_4	3.92
PF02073	Peptidase_M29	2.94
PF03640	Lipoprotein_15	1.96
PF00144	Beta-lactamase	1.96
PF13191	AAA_16	0.98
PF13783	DUF4177	0.98
PF13426	PAS_9	0.98
PF04542	Sigma70_r2	0.98
PF14559	TPR_19	0.98
PF00182	Glyco_hydro_19	0.98
PF00378	ECH_1	0.98
PF02782	FGGY_C	0.98
PF09363	XFP_C	0.98
PF00009	GTP_EFTU	0.98
PF10604	Polyketide_cyc2	0.98
PF00274	Glycolytic	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0282	Acetate kinase	Energy production and conversion [C]	10.78
COG3426	Butyrate kinase	Energy production and conversion [C]	10.78
COG2309	Leucyl aminopeptidase (aminopeptidase T)	Amino acid transport and metabolism [E]	2.94
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.96
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.96
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.96
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	1.96
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.98
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.98
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.98
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	0.98
COG3588	Fructose-bisphosphate aldolase class 1	Carbohydrate transport and metabolism [G]	0.98
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	0.98
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
All Organisms	root	All Organisms	28.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
cellular organisms	root	All Organisms → cellular organisms	28.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	28.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	27.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	27.45 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	16.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	16.67 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.88 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	71.57 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	16.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.88 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZRSKLJ02FOL8G	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	530	Open in IMG/M
3300001538\|A10PFW1_10479310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	855	Open in IMG/M
3300002568\|C688J35102_119106748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	639	Open in IMG/M
3300005436\|Ga0070713_100682559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	980	Open in IMG/M
3300005471\|Ga0070698_100619653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1023	Open in IMG/M
3300005526\|Ga0073909_10332928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	699	Open in IMG/M
3300005543\|Ga0070672_101987249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	524	Open in IMG/M
3300006173\|Ga0070716_101593452	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300009137\|Ga0066709_102533677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	690	Open in IMG/M
3300009545\|Ga0105237_12605091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	516	Open in IMG/M
3300009840\|Ga0126313_11356224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	589	Open in IMG/M
3300012212\|Ga0150985_117157018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300012355\|Ga0137369_10381144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1022	Open in IMG/M
3300012469\|Ga0150984_117959647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300012469\|Ga0150984_121400764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300012951\|Ga0164300_10787918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	587	Open in IMG/M
3300012960\|Ga0164301_11704409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	527	Open in IMG/M
3300012971\|Ga0126369_10566372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	1202	Open in IMG/M
3300012988\|Ga0164306_11031099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	679	Open in IMG/M
3300014745\|Ga0157377_11058207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	619	Open in IMG/M
3300015051\|Ga0137414_1198167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6037	Open in IMG/M
3300015372\|Ga0132256_100848217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1030	Open in IMG/M
3300021363\|Ga0193699_10004525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5058	Open in IMG/M
3300025909\|Ga0207705_11463294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	518	Open in IMG/M
3300025919\|Ga0207657_10812018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	723	Open in IMG/M
3300026142\|Ga0207698_10122974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2200	Open in IMG/M
3300028784\|Ga0307282_10135656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1160	Open in IMG/M
3300031366\|Ga0307506_10284783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	641	Open in IMG/M
3300034090\|Ga0326723_0424924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	605	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.59%
Host-Associated	Host-Associated	29.41%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.59%
Plants	Host-Associated → Plants	29.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.57%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.86%
Peat	Environmental → Terrestrial → Peat	0.98%
Roots	Host-Associated → Plants → Roots	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.04%
Loam	Environmental → Terrestrial → Soil → Loam	20.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.98%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.98%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.82%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.88%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	4.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.92%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	3.92%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.96%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.96%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.96%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.98%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2189573003	Grass soil microbial communities from Rothamsted Park, UK - FE2 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028577	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_11155600	2170459024	Grass Soil	MPGLEHEPFAEVWFRAIDDAAWREASERARELDKTGLEVWTTTDTPEVAAFLEERGYAEVRRYV
FE2_06220340	2189573003	Grass Soil	VDVHPIPGLEHLPYAEVWFHAVDDEAWRAASAAARAIDKTGLEVWTTTRTPEVATWLEDKAY
C688J14111_102512013	3300001305	Soil	VDVKPIPGLEHLPYAEVWLRAPDEAGWREASQLARELGKDGLEVWTT
A10PFW1_104793103	3300001538	Permafrost	MPGLEHLPFAEVWLREADEDAWRAASVAARAIGKDGLEVWTTDETPEVVTFLEARGYEIVRRYVI
C688J35102_1191067483	3300002568	Soil	VDVKPLPGLEHLPYAEVWLRSADEGAWREASRLARGLGKSGLEVWTTDETPEVVSLLEPHGYEIVRRYVVS
Ga0063454_1000724093	3300004081	Soil	VQVNPIPGLEHLPYAEVWFHEVDEASWGAASAAARALGKTGLEVWTTDRTP
Ga0063454_1001644601	3300004081	Soil	VDVKPIPGLEQLPWAEVWFHEIDEARWREASAAAKKIGKPGLEAW
Ga0063454_1005805551	3300004081	Soil	MPGLEHLPFAEVWFHEVDDRRWREASAAAVALGKTGLEAWTTDHTPEVAAFL*
Ga0066679_102823071	3300005176	Soil	MNVVPIPGLEELPYAEVWFHEIDEARWREASALAGALGKPGLEVWTTDRT
Ga0070680_1005311791	3300005336	Corn Rhizosphere	VDVQPLPGLEHLPYAEVWFHAVDDDAWRAASAAAREIGKSGLEVWTTTRTPEV
Ga0070661_1006982861	3300005344	Corn Rhizosphere	VDVRPIPGLEHLPYAEVWFHAVDDDAWRKASAAARAIGKTGLEVWTTTRTPEVASWLEGK
Ga0070714_1006443861	3300005435	Agricultural Soil	VDVKPIPGLEQLPYAEVWFHEVDEAQWREASARARELGKTGLE
Ga0070714_1017606182	3300005435	Agricultural Soil	MPGLDALPFAEVWFHEIDEERWAQASARARALGKTGLEVWTTTRTPEVAAFL
Ga0070713_1006825591	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRAMDVNPIHVTEMPGLEHLPYAEVWFHEIDDERWREASVQARALGKTGLEVWTTDKTPEVVAFLES*
Ga0070708_1006480792	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPGLEHLPYAEVWFHHVEEERWREASAAARALGKSGLEVWTTDATPDVVGFFEARGYEEVRR
Ga0066687_104423542	3300005454	Soil	MNVVPIPGLEELPYAEVWFHEIDEARWREASALAGALGKPGLEVWTTDRTPEVVAFLQ
Ga0070707_1008599012	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPGLEHLPFAEVWFLEIDDERWREASAAARAIGKPGLEVWTTDKTPEVVSFLEERSYEQ
Ga0070707_1014241272	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MEVKPMPGLEHLPFAEVWFHEVDEERWREASAAARAIGKAGLEVWTTDRTPEVVSFLEQRGY
Ga0070698_1006196532	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDVKPMPGLEHLPYAEVWFHDVDEERWREASAAARALGKSGLEVWTTDATPEVVGFFEARGYEKVRRYV
Ga0073909_103329281	3300005526	Surface Soil	MSEGVQPLPGLEHLPYAEVWLRTPDEALWREASASARAIGKDGLEVWTTDETPEVAAFLEARDYALH
Ga0070672_1019872491	3300005543	Miscanthus Rhizosphere	MEHLPYAEVWLRSADESAWQEASRLARELGKDGLEVWTTDETPDVVSLLEPRGYEI
Ga0070696_1014230062	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VEVKPIPGLEQLPYAEVWFHELDEARWREASGLARSIGKTGLEVWTTDRTPEVVAFLEP
Ga0068854_1012098962	3300005578	Corn Rhizosphere	MQVIPIPGLEHLPYAEVWFHEVDDAQWREASAAAHAIGKTGLEVWTTDKTPEVVAFLEQRGY
Ga0068856_1006260642	3300005614	Corn Rhizosphere	VQVQEIPGLGHLPYAEVWLHGVDEARWREASSAARGIGKTGLEVWTTTKTQEV
Ga0066903_1000252861	3300005764	Tropical Forest Soil	VDVKPIPGLEQLPFAEVWFREIDDARWREASARARAIGRTGLEAWTTDRT
Ga0070715_101983341	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VQVQEIPGLGHLPYAEVWLHGVDEARWREASSAARGIGKTGLEVWTTTKTQEVADFFVSRGYE
Ga0070716_1015934522	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LTEVARNNAGVDVKPLPGLEHLPYAEVWLNSADESLWREASAAARAIGKDGLEVWSTDATPEVVPFLE
Ga0075425_1008061641	3300006854	Populus Rhizosphere	VQVQEIPGLGHLPYAEVWFHEVDDAHWPEASSAAREIGKSGLEVWTTTKTQEVADFFVA
Ga0105245_128692231	3300009098	Miscanthus Rhizosphere	VDVHPVPGLEHLPYAEVWFHAVDDDAWQAASDAARALGKTGLEVWTTTRTP
Ga0066709_1025336772	3300009137	Grasslands Soil	VEVKPIPGLEHLPFAEVWLREPSEALWREASVAARAIGKNGLEVWTTDETSDVIPFFEARGYWVVRPYRTTE
Ga0105237_126050913	3300009545	Corn Rhizosphere	VHVQPLPGLAQLPYAEVWFHQVDDAAWRAASDAARALGKTGLEVWTTTRTPEVAAFFEERGYAEV
Ga0126313_105575692	3300009840	Serpentine Soil	MEHLPFAEVWFHAIDDELWGEASRLARELGKTGLEAWTTEETPEVVAYLAARGYEEVRRY
Ga0126313_113562241	3300009840	Serpentine Soil	VDVKPMPGLEHLPFAEVWFHDIDDERWREASAAARAIGKTGLEAWTTDRTPEVAAFLEARGYDVVRRYVI
Ga0126309_100355901	3300010039	Serpentine Soil	VDEYAVTLLTPRVDVKPMPGLEHLPFGEVWFHEIDEARWREASAAARAIGKTGLEAW
Ga0126314_103097232	3300010042	Serpentine Soil	VDVKPMPGLEHLPFAEVWFHEIDDERWREASAAARAIGKTGLEAWTTDRTP
Ga0126310_107009232	3300010044	Serpentine Soil	VDVKPMPGLEHLPFAEVWFHAIDEERWREASAAARAIGKTGLEAWTTDRTPEVAAFLEAR
Ga0126379_115243091	3300010366	Tropical Forest Soil	MDVRPMPGLEHLPFAEVWFHEIDDARWREASAAALAIGKTGLEAWTTDRTPDVVAFFEAR
Ga0105239_121751622	3300010375	Corn Rhizosphere	VDVKPIPGLEHLPFAEVWFHEVDAEQWREASAAAHAIGKTGLEVWTTDKTP
Ga0120146_10553991	3300011992	Permafrost	MDVKPIPGLEHLPYAEVWFHEVDEVRWREASGLARELGKTGLEVWTTDRVPE
Ga0137374_101773171	3300012204	Vadose Zone Soil	VDAKPMPGLEHLPFAEVWFHDIDEARWREASAAARAIGKTGLEAWTTDKTPGVVSFLEERGY
Ga0137377_114857111	3300012211	Vadose Zone Soil	MDVKPMPGLEHLPYAKVWFHEIDEARWHGASAAALALGKTGLEAWTTDA
Ga0150985_1171570183	3300012212	Avena Fatua Rhizosphere	VDVKPLPGLEHLPYAEVWLRAADEGAWREASRLARELGKDGLEVWTTDGSPEVVSFL
Ga0137369_103811442	3300012355	Vadose Zone Soil	VEVNPIPGLAHLPWAEVWFHAVDEDVWREASRRARSIGKTGLEVWTTDATPEVVSFLVPRGYEEVRRY
Ga0137368_107019713	3300012358	Vadose Zone Soil	VDVKPMPGLEHLPFAEVWFEEIDDERWRVASNAARAIGKAGLEAWTTN
Ga0150984_1179596471	3300012469	Avena Fatua Rhizosphere	VDVKLLPGLEHLPYAEVWLRSADEDAWREASRLARELGKDGLEVWTTDATPEVVSFLEPRGYE
Ga0150984_1214007641	3300012469	Avena Fatua Rhizosphere	VDVKPIPGLEHLPYAEVWLRAPDEAGWREASQLAGELGKDGLEVWTTDETPEVVAFLEPRGYEIV
Ga0137373_102461363	3300012532	Vadose Zone Soil	VEVNPIPGLAHLPWAEVWFHAVDEDVWREASRRARSIGKTGLEVWT
Ga0137373_109539351	3300012532	Vadose Zone Soil	VDVKPMPGLEHLPFAEAWFHEVDDERWRAASDAARAIGKTGLEAWTTDKTPDVVSFLEAR
Ga0164300_107879183	3300012951	Soil	MDVKPIPGLEQLPYAEVWFHEVDEARWREASGLARMLGKTGLEVWTTD
Ga0164298_108718591	3300012955	Soil	MPGLEHLPFAEVWLHDIDDEVWREASDAARAIGKDGLEVWTTD
Ga0164303_106172942	3300012957	Soil	MQVIPIPGLEHLPYAEVWFHEVDDARWREACAAAHALGKTGLEVWTTDRTPEV
Ga0164301_104256213	3300012960	Soil	MPGLEHLPFAEVWLHDIDDEVWREASDAARAIGKDGLEVWTTDATPDV
Ga0164301_107722942	3300012960	Soil	VDVNPIPGLEQLPWAEVWFHEIDDARWREASAAAREIGKSGLDVWTTDATPEVVAFLEERGY*
Ga0164301_117044093	3300012960	Soil	VDVKPVPGLEHLPFAEVWLRAADEADWREASRLARELGKDGLEVWTTDETPEVAAFLEARGY
Ga0126369_105663724	3300012971	Tropical Forest Soil	VNVSPIPGLEHLPYAEVWFHEIDEGRWREASAAARALGKTGLETWTTDRTPEV
Ga0164308_110444183	3300012985	Soil	VDVKPIPGLEHLPFAEVWFNAIDDDAWRNASRLARALGKTGLEAWTTDRTPAVAAF
Ga0164306_104455861	3300012988	Soil	MDVKPIPGLEQLPYAEVWFHELDEARWREASELARMLGKTGLEVWTTDRTPE
Ga0164306_110310993	3300012988	Soil	MDVKPLPGLEHLPFAEVWLREPDDAAWHTACTAARAIGKNGLEVWTTDETPGVVSFLEARGYEIV
Ga0157373_112504762	3300013100	Corn Rhizosphere	VEVRPIPGLEHLPYAEVWFHRVDDLRCREASAAARALGKTGLEAWTTTRTEEVAASLCA
Ga0157374_118728362	3300013296	Miscanthus Rhizosphere	VDVKPMPGLEHLPFAEVWFHEIDDSSWHEASERALAIGKTGLEAWTTDSTPEVAAFL
Ga0157378_122236901	3300013297	Miscanthus Rhizosphere	VQVQEIPGLGHLPYAEVWLHGVDEARWREASSAARGIGKTGLEVWTTT
Ga0163163_126537821	3300014325	Switchgrass Rhizosphere	VDVNPIPGLEQLPWAEVWFHEIDEARWREASAAAREIGKSGLDVWTTDATPEVVAFLEE
Ga0157377_110582073	3300014745	Miscanthus Rhizosphere	MEHLPYAEVWLRSADEDDWREASRLARELGKDGLEVWTTDETPEVVALLEPRGYEIVRR
Ga0157376_113634932	3300014969	Miscanthus Rhizosphere	VDVNPIPGLEQLPWAEVWFHEIDEVRWREASAAAREIGKPGLDVWT
Ga0137414_11981674	3300015051	Vadose Zone Soil	MDVKPMPGLEQLPFAEVWLREPDEDAWRAASAAAARSGKTGWRFWTTDETPQVVPFLEARATRSSAAI*
Ga0134073_103048102	3300015356	Grasslands Soil	VDVKPIPGLEQLPFAEVWFQEIDDASWRVASAAALAIGKTGLEAWTTSRTPEVAAFV
Ga0132256_1008482171	3300015372	Arabidopsis Rhizosphere	VDVKPMPGLEHLPFAEVWFHEIDDASWREASQRALAIGKTGLEAWTTDRTPEVAAFLEARGYEIVRRY
Ga0132257_1044541341	3300015373	Arabidopsis Rhizosphere	VQVQEIPGLGHLPYAEVWLHGVDEARWREASSAARGIGKTGLEVWTTTKTQ
Ga0187778_112347853	3300017961	Tropical Peatland	MTDNRRMEVQPIPGLEQLPYAEVWFNEIDDALWSEASRAAEAIGKTGLEAWTT
Ga0206353_112542321	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VDVRPIPGLEHLPYAEVWFHAADDDAWRKASAAARAIGKTGLEVWTTTRTPEVA
Ga0193699_100045256	3300021363	Soil	MRRENVPMDVKPMRVIEIPGLEQLPYAEVWFHELDEARWREASGLARMLGKTGLEVWTTDRTPEVVAFL
Ga0207705_114632941	3300025909	Corn Rhizosphere	VKPLPGLEHLPYAEVWLRSPDEAAWQEASRLARELGKDGLEVWTTDETPEVVTFLEPRGYAVVRRY
Ga0207671_115874541	3300025914	Corn Rhizosphere	VHVQPLPGLAQLPYAEVWFHQVDDAAWRAASDAARALGKTGLEVWTTTRTPEVAAFFEER
Ga0207657_108120181	3300025919	Corn Rhizosphere	MDVIPIPGLEHLPYAEVWFHEIDEERFGEASAKARALDKDGLEVWTTDRTPEVATFLAARGYEQVRRY
Ga0207652_106277661	3300025921	Corn Rhizosphere	VDVHPVPGLEHLPYAEVWFHAVDDDAWQAASDAARALGKTGLEVWTTTRTPEVA
Ga0207646_102805444	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPGLEHLPFAEVWFLEIDDERWREASAAARAIGKPGLEVWTTDKTPEVVSFLEERSYEQV
Ga0207664_108377822	3300025929	Agricultural Soil	MDVRPVPGLEHLPYAEVWLHAVDDEAWQAASDAARAIGKTGLEVWTTTRTPDVVPWLRG
Ga0207701_113608091	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VDVNPIPGLEQLPWAEVWFHEIDEARWREASAAAREIGKSGLDVWTTDATPEVVAFLEERGYEEV
Ga0207644_101561697	3300025931	Switchgrass Rhizosphere	VDVKPIPGLEHLPFAEVWLHAVDDEEWRAASDAARAIGKDGLEVWT
Ga0207661_120991521	3300025944	Corn Rhizosphere	MDVRPIPGLEQLPYAEVWLHAVDDDAWRAASDAARAIGKTGLEVWTTTRTPEVASWLG
Ga0207640_108791291	3300025981	Corn Rhizosphere	VDVQPLPGLEHLPYAEVWFHAVDDDAWREASAAAREIGKSGLEVWTTTRTPEVAPWLEGRGYD
Ga0207674_104508813	3300026116	Corn Rhizosphere	MRAMDVNPIHVTEMPGLEHLPYAEVWFHELDEARWREASGLARSIGKTGLEVWTT
Ga0207698_101229743	3300026142	Corn Rhizosphere	VDVQPLPGLEHLPYAEVWFHAVDDDAWRAASAAAREIGKSGLEAWTTTRTPEVAPWLEGKGYQ
Ga0209074_102912703	3300027787	Agricultural Soil	VDVKPIPGLEHLPFAEVWLHAVDDEEWRAASDAARAIGKDGLEVWTTDATPEVVAFLEER
Ga0209590_110536292	3300027882	Vadose Zone Soil	MDVKAIPGLEHLPLAQVWFHEIDEAQWREASAAARSLGKTRLEVWTTDATPDV
Ga0265318_101968872	3300028577	Rhizosphere	MVDVKPLPGLEHLPFAEVWFHEIDDDSFGAASAAARVIGNNGLEVWTTDRTPGVVSFLVAREYQEVRR
Ga0307282_101356561	3300028784	Soil	MRTMDVKPIPGLEQLPYAEVWFHELDEARWREASRLARMLGKTGLEVWTTDRTPEVVAFLEPRGYDEVRR
Ga0265338_111948362	3300028800	Rhizosphere	MDVKEVPGLEHLPFAEVWFHEIDDASWLEASRLARELGKTGLEAWTTTRTPEV
Ga0307308_102443222	3300028884	Soil	MPGLEHLPFAEVWFHEIDDERWREASAAARALGKTGLEVWTTDAKPAVIAFL
Ga0307497_107661981	3300031226	Soil	LPEVKPMPGLEHLPFAEVWFHEVDDERWREASAAAHAIGKTGLEVWTTDKTPGVTAFFEQRGYEQVR
Ga0265320_103462591	3300031240	Rhizosphere	MEVKQIPGLEHLPFAEVWFHEIDDDSFGAASAAARVIGKNGLEVWTTDRTPGVVSFLVA
Ga0265340_105582081	3300031247	Rhizosphere	MDVKPVPGLEHLPFAEVWFHEIDETSWREASRLARELGKTGLETWTTTR
Ga0307506_102847833	3300031366	Soil	VDVKLLPGMEHLPYAEVWLRSADESAWHEASRLAHELGKDGLEVWTTDETPEVVSLLEPRGYEIVRRYVV
Ga0318526_101318251	3300031769	Soil	MPGLEHEPYAEVWFRAADDGAWQEASVRARELGKTGLEVWT
Ga0318552_103214831	3300031782	Soil	MPGLEHEPYAEVWFRAADDGAWQEASVRARELGKTGLEVWTTTETPAVVD
Ga0318568_100116756	3300031819	Soil	MPGLEHEPYAEVWFRAADDGAWQEASVRARELGKTGLEVWTTTETPAVVDFLAARGYA
Ga0308175_1028252921	3300031938	Soil	MPGLEHLPFAEAWFHEIDDARWREASARAQAIGKTGLEAWTTDRTPEV
Ga0318556_101136451	3300032043	Soil	MPGLEHEPYAEVWFRAVDDGAWQEASVRARELGKTGLEVWTTTETPAVVD
Ga0318504_105643171	3300032063	Soil	MPGLEHEPYAEVWFRAVDDGAWQEASVRARELGKTGLEVWTTTETPAVVDFLAARGYA
Ga0318553_106518603	3300032068	Soil	MDVHAIPGLEHEPYAEVWFRAIDDAAWREASDRARALGKTGLEAWTTDETPEVVAFLAARGYD
Ga0308173_120055322	3300032074	Soil	MDVRPIPGLEHEPFAEVWFHAIDDSAWREASDAARALAKTGLEAVTTTRTPEVAA
Ga0326723_0424924_3_194	3300034090	Peat Soil	MDVRPMPGLAHLPYAEVWFREIDEALFREASAAAATLGKTGLEAWTTDQTPKVVSFLEQRGYEE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101976

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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