Metagenome / Metatranscriptome Family F101985

Basic Information
Family ID	F101985
Family Type	Metagenome / Metatranscriptome
Number of Sequences	102
Average Sequence Length	83 residues
Representative Sequence	MTMSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSVCGLASA
Number of Associated Samples	86
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.20 %
% of genes near scaffold ends (potentially truncated)	88.24 %
% of genes from short scaffolds (< 2000 bps)	93.14 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Unclassified (74.510 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (13.725 % of family members)
Environment Ontology (ENVO)	Unclassified (30.392 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.020 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.86% β-sheet: 0.00% Coil/Unstructured: 35.14%
Feature Viewer

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Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF00072	Response_reg	3.92
PF05036	SPOR	3.92
PF08734	GYD	0.98
PF07690	MFS_1	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.98

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.51 %
All Organisms	root	All Organisms	25.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.51 %
cellular organisms	root	All Organisms → cellular organisms	25.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.51 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	25.49 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.51 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.51 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	21.57 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.51 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	19.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.51 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	7.84 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	7.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.51 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.84 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	3.92 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	2.94 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	74.51 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	7.84 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	3.92 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.94 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104900235	Not Available	868	Open in IMG/M
3300000559\|F14TC_100161732	Not Available	810	Open in IMG/M
3300000559\|F14TC_101561074	Not Available	526	Open in IMG/M
3300000890\|JGI11643J12802_10893037	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	957	Open in IMG/M
3300001139\|JGI10220J13317_10309796	Not Available	687	Open in IMG/M
3300001979\|JGI24740J21852_10113331	Not Available	683	Open in IMG/M
3300004114\|Ga0062593_103119309	Not Available	531	Open in IMG/M
3300004463\|Ga0063356_103522155	Not Available	674	Open in IMG/M
3300004463\|Ga0063356_105142775	Not Available	562	Open in IMG/M
3300004479\|Ga0062595_100246777	Not Available	1154	Open in IMG/M
3300004479\|Ga0062595_100617559	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	849	Open in IMG/M
3300004785\|Ga0058858_1154305	Not Available	531	Open in IMG/M
3300005294\|Ga0065705_10854536	Not Available	591	Open in IMG/M
3300005327\|Ga0070658_11737751	Not Available	540	Open in IMG/M
3300005332\|Ga0066388_101978184	Not Available	1044	Open in IMG/M
3300005332\|Ga0066388_102756663	Not Available	897	Open in IMG/M
3300005347\|Ga0070668_101254303	Not Available	673	Open in IMG/M
3300005355\|Ga0070671_101920309	Not Available	527	Open in IMG/M
3300005356\|Ga0070674_101171490	Not Available	681	Open in IMG/M
3300005435\|Ga0070714_102350046	Not Available	518	Open in IMG/M
3300005436\|Ga0070713_100471283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1182	Open in IMG/M
3300005437\|Ga0070710_10255587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1128	Open in IMG/M
3300005437\|Ga0070710_10333550	Not Available	999	Open in IMG/M
3300005438\|Ga0070701_11414293	Not Available	500	Open in IMG/M
3300005545\|Ga0070695_100763454	Not Available	772	Open in IMG/M
3300005577\|Ga0068857_100864070	Not Available	866	Open in IMG/M
3300005764\|Ga0066903_107230524	Not Available	574	Open in IMG/M
3300006058\|Ga0075432_10239661	Not Available	732	Open in IMG/M
3300006058\|Ga0075432_10566544	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300006163\|Ga0070715_10090272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1408	Open in IMG/M
3300006173\|Ga0070716_100418043	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300006196\|Ga0075422_10299314	Not Available	689	Open in IMG/M
3300006755\|Ga0079222_10083307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1621	Open in IMG/M
3300006755\|Ga0079222_11559729	Not Available	623	Open in IMG/M
3300006844\|Ga0075428_100080316	All Organisms → cellular organisms → Bacteria	3559	Open in IMG/M
3300006880\|Ga0075429_100839879	Not Available	804	Open in IMG/M
3300006903\|Ga0075426_10934846	Not Available	655	Open in IMG/M
3300006904\|Ga0075424_101884387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	632	Open in IMG/M
3300006904\|Ga0075424_102723690	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	516	Open in IMG/M
3300007076\|Ga0075435_100255402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1492	Open in IMG/M
3300007076\|Ga0075435_101144253	Not Available	680	Open in IMG/M
3300009100\|Ga0075418_10982365	Not Available	913	Open in IMG/M
3300009101\|Ga0105247_11018992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	648	Open in IMG/M
3300010047\|Ga0126382_10195107	Not Available	1435	Open in IMG/M
3300010048\|Ga0126373_11984647	Not Available	644	Open in IMG/M
3300010359\|Ga0126376_10190837	Not Available	1688	Open in IMG/M
3300010360\|Ga0126372_13320920	Not Available	500	Open in IMG/M
3300010371\|Ga0134125_12525572	Not Available	558	Open in IMG/M
3300010373\|Ga0134128_11218775	Not Available	830	Open in IMG/M
3300010373\|Ga0134128_11402422	Not Available	769	Open in IMG/M
3300010376\|Ga0126381_101203379	Not Available	1095	Open in IMG/M
3300010401\|Ga0134121_12860561	Not Available	529	Open in IMG/M
3300012354\|Ga0137366_11087264	Not Available	551	Open in IMG/M
3300012903\|Ga0157289_10017233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1522	Open in IMG/M
3300012908\|Ga0157286_10087960	Not Available	887	Open in IMG/M
3300012916\|Ga0157310_10369803	Not Available	586	Open in IMG/M
3300012948\|Ga0126375_10493064	Not Available	911	Open in IMG/M
3300012955\|Ga0164298_10123794	All Organisms → cellular organisms → Bacteria	1409	Open in IMG/M
3300012989\|Ga0164305_11506401	Not Available	597	Open in IMG/M
3300013306\|Ga0163162_11094531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	903	Open in IMG/M
3300015077\|Ga0173483_10323206	Not Available	764	Open in IMG/M
3300015077\|Ga0173483_10388870	Not Available	712	Open in IMG/M
3300015077\|Ga0173483_10652581	Not Available	587	Open in IMG/M
3300015372\|Ga0132256_101783253	Not Available	724	Open in IMG/M
3300015374\|Ga0132255_101166284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1159	Open in IMG/M
3300016270\|Ga0182036_10482528	Not Available	979	Open in IMG/M
3300016341\|Ga0182035_11733027	Not Available	565	Open in IMG/M
3300016387\|Ga0182040_10313676	Not Available	1204	Open in IMG/M
3300016445\|Ga0182038_10538652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1001	Open in IMG/M
3300019233\|Ga0184645_1168688	Not Available	579	Open in IMG/M
3300019356\|Ga0173481_10689037	Not Available	550	Open in IMG/M
3300019361\|Ga0173482_10072447	Not Available	1183	Open in IMG/M
3300019361\|Ga0173482_10158744	Not Available	889	Open in IMG/M
3300020076\|Ga0206355_1446269	Not Available	580	Open in IMG/M
3300020080\|Ga0206350_10067873	Not Available	526	Open in IMG/M
3300021560\|Ga0126371_10711145	Not Available	1152	Open in IMG/M
3300021560\|Ga0126371_12723658	Not Available	599	Open in IMG/M
3300023102\|Ga0247754_1156410	Not Available	568	Open in IMG/M
3300023263\|Ga0247800_1061591	Not Available	704	Open in IMG/M
3300025906\|Ga0207699_10492741	Not Available	884	Open in IMG/M
3300025906\|Ga0207699_10604625	Not Available	798	Open in IMG/M
3300025907\|Ga0207645_10167418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1439	Open in IMG/M
3300025923\|Ga0207681_10298527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1274	Open in IMG/M
3300025926\|Ga0207659_10860599	Not Available	779	Open in IMG/M
3300025931\|Ga0207644_10981463	Not Available	709	Open in IMG/M
3300025932\|Ga0207690_10145494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1752	Open in IMG/M
3300025937\|Ga0207669_10712760	Not Available	826	Open in IMG/M
3300026023\|Ga0207677_11512220	Not Available	620	Open in IMG/M
3300027873\|Ga0209814_10449562	Not Available	569	Open in IMG/M
3300027907\|Ga0207428_10815336	Not Available	662	Open in IMG/M
3300027909\|Ga0209382_10643077	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1149	Open in IMG/M
3300031719\|Ga0306917_10111055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1982	Open in IMG/M
3300031744\|Ga0306918_11288937	Not Available	562	Open in IMG/M
3300031833\|Ga0310917_10425707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	903	Open in IMG/M
3300031879\|Ga0306919_10051279	Not Available	2732	Open in IMG/M
3300031912\|Ga0306921_10512857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1393	Open in IMG/M
3300031941\|Ga0310912_10150661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1755	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	65.69%
Host-Associated	Host-Associated	34.31%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.71%
Plants	Host-Associated → Plants	33.33%
Aquatic	Environmental → Aquatic	0.98%
Human	Host-Associated → Human	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	64.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.49%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.84%
Freshwater	Environmental → Aquatic → Freshwater	0.98%
Digestive System	Host-Associated → Human → Digestive System	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.02%
Loam	Environmental → Terrestrial → Soil → Loam	15.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.78%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.86%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.98%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.43%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.94%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.96%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.98%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	13.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.92%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.96%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.96%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.96%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.98%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001979	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004785	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1049002351	3300000364	Soil	MTTPIEVREEIDVVAVDPLFIERQRNRYASRAVASLVWLNGLAAIALLIALVHASLPADQVKRFADAMLVFGIGSVVGLVSAFFAYIGRTFRL
F14TC_1001617322	3300000559	Soil	MSGFFALMRPVVQLMSPIEVREEIDVVSVDPLFIERQRNRYASRVIAYIVWLNGLSAIALLIGLSHASLPADQVKRFADA
F14TC_1015610741	3300000559	Soil	MTTPPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIGLLIGLAYASLPTDQVKRFADAMLV
JGI11643J12802_108930371	3300000890	Soil	MLTDPQMSPIDVREEIGVVSIDPLYIERQRNRYGSRAVAYLVWLNGLAAIGLLIGLAYASLPTDQVKRFADAMLVFGAGSVAGLTSAFFAYISRTFRLERP
JGI10220J13317_103097961	3300001139	Soil	MSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSVCGLASAFFAYIGRTFG
JGI24740J21852_101133311	3300001979	Corn Rhizosphere	MSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSVCGLASAFFAYIGRTFRLERPHL
Ga0062593_1031193091	3300004114	Soil	MSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLV
Ga0063356_1035221551	3300004463	Arabidopsis Thaliana Rhizosphere	MTPVEVREEIDVVPVDPLFLERQRNRYASRGIAYLVWLNGLAAIALLVALVHASLPADAVKRFADAMLVFGAGSI
Ga0063356_1051427752	3300004463	Arabidopsis Thaliana Rhizosphere	MSPLEVREVSIDPLYIERQRNRYASRAVAYLVWLNGVAAIGLLIGLAYASLPADQVKRF
Ga0062595_1002467771	3300004479	Soil	MSGFFALMRPVVQLMSPIEVREEIDVVSVDPLFIERQRNRYASRVIAYIVWLNGLSAIALLIGLSHASLPADQVKRFADAMLVFGAGSVCGLASAFFAYIGRTFRLERPTLIG
Ga0062595_1006175593	3300004479	Soil	MLTDPQMSPIDVREEIGVVSIDPLYIERQRNRYGSRAVAYLVWLNGLAAIGLLIGLAYASLPADQV
Ga0058858_11543052	3300004785	Host-Associated	MTMSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSVCGLASA
Ga0065705_108545362	3300005294	Switchgrass Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQVKRFADAMLVFGAGSVCGLASAFFAYIGRAFRLERPHL
Ga0070658_117377512	3300005327	Corn Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVFGAGSVCGLASAFFAY
Ga0066388_1019781843	3300005332	Tropical Forest Soil	MSGFFALMRVRPVSPIEVRKEVDVVSVDPLFIERQRNRYASRAVAYVVWLNGLAAIAVLIGLVHASLPADQVKRIADAMLIFGAGSVCGLASAFFAYLGR
Ga0066388_1027566632	3300005332	Tropical Forest Soil	MPMADIEVREEVDVVSFDPLFIERQRNRYASRAVAYVVWLNGLAAIALLVGLPHASLPADEVKRFADAMLVFGAGSICGLVSAFFAYISRTFR
Ga0066388_1063668852	3300005332	Tropical Forest Soil	MSPIEVIKEVDVVSVDPLFIERQRNRYASRAIAYIVWLNGLAAIAVLIGLAHASLPADQVKR
Ga0070668_1012543032	3300005347	Switchgrass Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAVALLIGLTHASLRADQVKGFLCLEPVQCDLASSFFAYIGRTFRLER
Ga0070671_1019203091	3300005355	Switchgrass Rhizosphere	MTRCEHTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVFGAGSVCGLASAFFAYIGRTFRLER
Ga0070674_1011714901	3300005356	Miscanthus Rhizosphere	MTTPPIEVREEIDVVSVDPLFVERQRNRYASRAVASLVWLNGLAAIGLLIGLLATPPAEEVKRFADAMLVFGAGSV
Ga0070714_1023500461	3300005435	Agricultural Soil	MSPVEVKKEVDIISIDPLFLERQRSRYASRAIAYVVWLNGLAAIGLLISLAARAGFPADAAKRFADAMFVFGVGSVAGLASAFVAYVGRTLRLE
Ga0070713_1004712833	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSVCGLASAFFAYIGRT
Ga0070710_102555873	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVFGAGSVCGLASAFFAYIGRTFRLER
Ga0070710_103335502	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSPIEVRKEVDVVSVDPLFIERQRNRYAGRVIAYIVWLNGLSAIALLIGLVHASLPADEVKRFADAMLVFGAG
Ga0070701_114142932	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSV
Ga0070695_1007634541	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTLHLGFFRVTMTTPPIEVREEIDVVSVDPLFVERQRNLYASRAVASLVWLNGLAAIGLLICLLATPPADEVRRFADAMLVFG
Ga0068857_1008640701	3300005577	Corn Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVFGAGSVCGLASAFFAYIGRTF
Ga0066903_1072305241	3300005764	Tropical Forest Soil	MQMADIEVREEVDVVSFDPLFIERQRNRYASRAVAYVVWLNGLAAIALLIGLAHASLPADEVKRFADAMLVFGAGSICGLVSAFFAYISRTFRLER
Ga0075432_102396613	3300006058	Populus Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYASRAVAYVVWLNGLAAIAVLIGLAHAGLPAEQVKRFADAMLVFGAGSICGLASAFFAYIGRTFRLERPS
Ga0075432_105665441	3300006058	Populus Rhizosphere	MTTPPIEIREEIDVVSVDPLFVERQRNRYASRAVASLVWLNGLAAIGLLIGLLATPPADEVKR
Ga0070715_100902721	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTTSPIEVREEIDVVSIDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVFGA
Ga0070716_1004180431	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MADIEVREEVDVVSFDPLFIERQRNRYASRAVAYVVWLNGLAAIALLNGLVHASLPADEVKRFADAMLVFGAGSVFGLVSAFFAYISRTFRLERPTLIGWRRPLR
Ga0075422_102993141	3300006196	Populus Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERPRNRYASRAVAYVVWLNGLAAIAVLIGLAHASLPAEQVKRFADAMLVFGAGSICGLASAFFAYIGRTFRLERPSLIGWRRPI
Ga0079222_100833071	3300006755	Agricultural Soil	MTTSPIEVREEIDVVSVDPLFIERQRNRYASHAVAYVVWLNGLAAIAVLIGLAHASLPAEQLKRFADAMLVFGAG
Ga0079222_115597291	3300006755	Agricultural Soil	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVFGAGS
Ga0075428_1000803169	3300006844	Populus Rhizosphere	MTMSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFSVRSGKRRLCLHWADL*
Ga0075429_1008398791	3300006880	Populus Rhizosphere	MTMSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSVCGLASAFFAYIGRTFRLE
Ga0075426_109348462	3300006903	Populus Rhizosphere	MEMASIDVREEIDMISIDPLFVERQRNRYSSRALGYLVWLNGLAAIALLIGLPHANLPADESKRLADAMLLFGAGSL
Ga0075424_1018843871	3300006904	Populus Rhizosphere	MSRVELREEVDLVSIDPLFIERQRNRYASRAVAYVVWLNGLAAIAVLIGLMHATLSPDQVKRVADAMLVFGAGAVSGLASAFFAYV
Ga0075424_1027236901	3300006904	Populus Rhizosphere	VREEIDVVSVDPLFIERQRNRYASRAVAYLVWLNGLAAIGLLIGLAHASLPADEVKRFADAMLVFGAGAVCGARKCLLCLRREDLQT*
Ga0075435_1002554021	3300007076	Populus Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYLVWLNGLAAIALLIGLVHASLPADQVKGFADAMLVFGAGSVAGLTSAFFAYISRTFR
Ga0075435_1011442533	3300007076	Populus Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYASHAVAYVVWLNGLAAIAVLIGLAHASLPAEQLKRFADAMLVFGAGSICGL
Ga0075418_109823651	3300009100	Populus Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVFGAGSVC
Ga0105247_110189921	3300009101	Switchgrass Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYASRTVAYLVWLNGLAAIAVLIGLAHASLPAEQVKRFADAMLVFGAGSICGLASAFFAYIGRTFRLERPSLIGWRRPIRW
Ga0126374_104257721	3300009792	Tropical Forest Soil	MSPVEVKKEVDIISIDPLFLERQRSRYASRAIAYVVWLNGLAAIGLVISLAARAGFPADAAKR
Ga0126382_101951071	3300010047	Tropical Forest Soil	MAPVEVKKEVDIVSVDPLLIERQRNRYASRAVAYVVWLNGLAAIGLLISLAARAGFPADAAKRFADAMFVFGVGSVAGLAS
Ga0126373_119846471	3300010048	Tropical Forest Soil	MSPVERKEVDIVSVDPLFIERQRNRYDRYASRAIAYVVWLNGLAAIGLLIGLAAHAGLPADAAHRFARGILVFAVGSVAGLASAFFGYIGRTLRLEYPGVISWRTP
Ga0126376_101908373	3300010359	Tropical Forest Soil	MSPVEVKKEVDIISIDPLFLERQRSRYASRAIAYVVWLNGLAAIGLLISLAARAGFPADAAKRFADAMFVF
Ga0126372_133209202	3300010360	Tropical Forest Soil	MSPVERKEVDIVSVDPLFIERQRNRYASRALASVVWLNALAAIALLISLAVRVGFPADAAKRFGDAMLVFGAGSVVGL
Ga0134125_125255721	3300010371	Terrestrial Soil	MTTPPIEVREEIDVVSVDPLFVERQRNRYASRAVAYLVWLNGLAAIGLLIGLLATHPADEVKRFADAMLVFGADSVARLVSACFAYISRTFRLERPTL
Ga0134128_112187751	3300010373	Terrestrial Soil	MTTSPIEVREEIDVVSVEPLFIERQRNRYASRAVAYVVWLNGLAAIAVLIGLAHAGLPAEQVKR
Ga0134128_114024221	3300010373	Terrestrial Soil	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKG
Ga0126381_1012033791	3300010376	Tropical Forest Soil	MSPVEVKKEVDIISIDPLFLERQRSRYASRAIAYVVWLNGLAAIGLLISLAARAGFPADAAKRFADAMFVFGVGSVAGLASA
Ga0134121_128605611	3300010401	Terrestrial Soil	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFLCLEPVQCDLASSFFAYIGRTFRLERPHLIGWRRPIR
Ga0137366_110872641	3300012354	Vadose Zone Soil	MSPIEVREEIDVLAVDPLFIERQRNRYASRVIAYIVWLNGLASMVLLIGLAHASLPVDEVKRFADAMLVFGAGLSCWNGKRLLCLY*
Ga0157289_100172334	3300012903	Soil	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVT*
Ga0157286_100879603	3300012908	Soil	MTTSPIEVREEIDVVSVDPLFIERQRNRYASRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVFGAGSVC
Ga0157310_103698031	3300012916	Soil	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVFGAGSVCGL
Ga0126375_104930641	3300012948	Tropical Forest Soil	MSPVEVKKEVDIISIDPLFLERQRSRYASRAIAYVVWLNGLAAIGLLISLAARAGFPADAAKRFADAMFV
Ga0164298_101237944	3300012955	Soil	MTMSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSVCGLASAFFAYIPHLYTWFCLGRGS*
Ga0126369_134705821	3300012971	Tropical Forest Soil	MAPVEVKKEIDILSVDPLFHERQRNRYASRAVAYVVWLNGLAAIGLLISLAARAGFPA
Ga0164305_115064011	3300012989	Soil	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVFGAGSVCGLASAFFAYIGRTFRL
Ga0163162_110945311	3300013306	Switchgrass Rhizosphere	MTRCEHTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVK
Ga0173483_103232061	3300015077	Soil	MTNSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYLVWLNGLAAIALLIGLTHSSLRADQVKGFADAMLVFGAGS
Ga0173483_103888701	3300015077	Soil	MAMSRVELREEVDLVSIDPLFIERQRNRYASRAVAYVVWLNGLAAIAVLIGLMHATLSADQVKRVADAMLVFGAGAVSGLASAFFAYVGRIIRLERPALI
Ga0173483_106525811	3300015077	Soil	MTTSPIEVREEIDVVSVDPLFIERQRNRYASRAVAYVVWLNGLAAIAVLIGLAHASLPAEQVKRFADAMLVFGAGSICGLASAFFAYIREDLQT*
Ga0132256_1017832531	3300015372	Arabidopsis Rhizosphere	MSPVEVKKEVDIISIDPLFLERQRSRYASRAIAYVVWLNGLAAIGLLISLAARAGFPADAAKRFADAMFVFGVGSVAGLASAFVAYV
Ga0132255_1011662843	3300015374	Arabidopsis Rhizosphere	MTMSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSVCGLASAFFAYIGRTFRLER
Ga0182036_104825281	3300016270	Soil	MSPIEVRKEVDVVSVDPLFIERQRNRYASRAVAYVVWLNGLAAIAVLIGLAHASLPTDQVKHFADAMLVFGAG
Ga0182035_117330271	3300016341	Soil	MSPVERKEVDIVSVDPLFIERQRNRYDRFASRAIAYVVWLNGLAAIGLLISLAARTGLHANAAHRISRGILVFGLGSVAGLASAFFGYIGRTLRLEYPGLIS
Ga0182040_103136763	3300016387	Soil	MPTPIEVREVVSVDPLFVERQRNRYASRAVGYVVLLNGIAAIGLLVGLPHARLPADVLKPFADAMVVFGVGSLFGLASTFIAYVGRTLRLEHP
Ga0182038_105386521	3300016445	Soil	MPTPIEVREVVSVDPLFVERQRNRYASRAVGYVVLLNGIAAIGLLVGLPHASLPADVLKPFADAMVVFGVGSLFGLASTFIAYVGRTLRLEHPDLFP
Ga0184645_11686881	3300019233	Groundwater Sediment	MTMPPAEVDIREDIDIVSLDPLFIERQRNRYASRAVAYVVWLNGLAALAILLGLAHATIPPDNVKRFADAMLVFGAGAAAGLTS
Ga0173481_106890371	3300019356	Soil	MEMASIDVREEIDMISIDPLFVERQRNRYSSRALGYLVWLNGLAAIALLIGLPHANLPADESKRLADAMLLFGAGSLCGLASA
Ga0173482_100724474	3300019361	Soil	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLAHASLPADQVKGFADAM
Ga0173482_101587441	3300019361	Soil	MSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSVCGLASA
Ga0206355_14462692	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	MSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSVAGLTSAFFAYISRTFRLERPT
Ga0206350_100678731	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	MTTSPIEVREEIDVVSIDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVFGAGSVCGLASAFVAYIGRTFRLERPH
Ga0126371_107111452	3300021560	Tropical Forest Soil	MADIEVREEVDVVSFDPLFIERQRNRYASRAVAYVVWLNGLAAIALLIGLAHASLPADEVKRFADAMLVFGAGSICGLVSAFFAYISRTFLP
Ga0126371_127236581	3300021560	Tropical Forest Soil	MSPVERKEVDIVSVDPLFIERQRNRYERYASRAIAYVVWLNGLAAIGLLIGLAAHAGLPADAAHRFARGILVFAVGSVAGLASAFFGYIGRTLRLEYPGVISWRTPWFAII
Ga0247801_10729362	3300023064	Soil	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVK
Ga0247754_11564101	3300023102	Soil	MSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSVCGLASAFFAYIGRTFRLERPHLI
Ga0247800_10615912	3300023263	Soil	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLAHASLPADQVKGFADAMLVFGAGSVCG
Ga0207699_104927411	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MADIEVREEVDVVSFDPLFIERQRNRYASRAVAYVVWLNGLAAIALLIGLVHASLPADEVKRFADAMLVFGAGSVFGLVSAFF
Ga0207699_106046251	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSVCGLASAFFAYIGRTFR
Ga0207645_101674184	3300025907	Miscanthus Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVF
Ga0207681_102985273	3300025923	Switchgrass Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADA
Ga0207659_108605991	3300025926	Miscanthus Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFL
Ga0207644_109814631	3300025931	Switchgrass Rhizosphere	MTLHLGFFRVTMTTPPIEVREEIDVVSVDPLFVERQRNLYASRAVASLVWLNGLAAIGLLICLLATPPADEVRRFADAMLVFGAGSVAGLVS
Ga0207690_101454943	3300025932	Corn Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVFGAG
Ga0207669_107127601	3300025937	Miscanthus Rhizosphere	MTTPPIEVREEIDVVSVDPLFVERQRNRYASRAVASLVWLNGLAAIGLLIGLLATPPAEAVKRFADAMLVFGAGSV
Ga0207640_111861383	3300025981	Corn Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQV
Ga0207677_115122201	3300026023	Miscanthus Rhizosphere	MTTSPIEVREEIDVVSVDPLFIERQRNRYSSRAVAYVVWLNGLAAIALLIGLTHASLRADQVKGFADAMLVFGAGSVCGLASAFFAYIG
Ga0209814_104495621	3300027873	Populus Rhizosphere	MTMSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLV
Ga0207428_108153362	3300027907	Populus Rhizosphere	LGFFRVTMTTPPIEIREEIDVVSVDPLFVERQRNRYASRAVASLVWLNGLAAIGLLIGLLATPPADEVKRFADAML
Ga0209382_106430771	3300027909	Populus Rhizosphere	MSPIEVREEIDVVSLDPLFIERQRNRYASRAVAYLVWLNGLAAIALLIGLAHASLPADQAKRFADAMLVFGAGSVCGLASAFFAYIGRTFRLERPHLIG
Ga0306917_101110553	3300031719	Soil	MAPVERKEVDIVSVDPLFLERQRNRYASRAVAYVVWLNGLAAIGLLISLAARAGFPADTAKRF
Ga0306918_112889371	3300031744	Soil	MATPIEVREEVDVVSVDPLFVERQRNRYASRAVAYVVLLNGIAAIGLLVGLPHASLPADVLKRFADAMVVFGVGSLFGLA
Ga0310917_104257071	3300031833	Soil	MAPVERKEVDIVSVDPLFLERQRNRYASRAVAYVVWLNGLAAIGLLISLAARAGFPADAAKRFADAMFVFGVGSVVGLASA
Ga0306919_100512791	3300031879	Soil	MSPIEVRKEVDVVSVDPLFIERQRNRYASRAVAYVVWLNGLAAIAVLIGLAHASLPTDQVKHFADAMLV
Ga0306921_105128571	3300031912	Soil	MAPVERKEVDIVSVDPLFLERQRNRYASRAVAYVVWLNGLAAIGLLISLAARAGFPADAAKRFADAMFVFGVGSVVGLASAFVAYVGRTLRLERPALIGW
Ga0310912_101506612	3300031941	Soil	MAPVERKEVDIVSVDPLFLERQRNRYASRAVAYVVWLNGLAAIGLLISLAARAGFPADTAKRFADAM

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F101985

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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