Metagenome Family F102127

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102127
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	90 residues
Representative Sequence	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA
Number of Associated Samples	62
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.45 %
% of genes near scaffold ends (potentially truncated)	25.49 %
% of genes from short scaffolds (< 2000 bps)	74.51 %
Associated GOLD sequencing projects	42
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (53.922 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil (80.392 % of family members)
Environment Ontology (ENVO)	Unclassified (76.471 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.35% β-sheet: 25.84% Coil/Unstructured: 52.81%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF07592	DDE_Tnp_ISAZ013	5.88
PF03576	Peptidase_S58	1.96
PF03861	ANTAR	1.96
PF01610	DDE_Tnp_ISL3	1.96
PF13676	TIR_2	1.96
PF01370	Epimerase	1.96
PF00106	adh_short	0.98
PF00989	PAS	0.98
PF00860	Xan_ur_permease	0.98
PF00583	Acetyltransf_1	0.98
PF00440	TetR_N	0.98
PF01636	APH	0.98
PF00589	Phage_integrase	0.98
PF02780	Transketolase_C	0.98
PF03023	MurJ	0.98
PF12900	Pyridox_ox_2	0.98
PF03989	DNA_gyraseA_C	0.98
PF00990	GGDEF	0.98
PF10974	DUF2804	0.98
PF00933	Glyco_hydro_3	0.98
PF02467	Whib	0.98
PF01047	MarR	0.98
PF03466	LysR_substrate	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG3191	L-aminopeptidase/D-esterase	Amino acid transport and metabolism [E]	3.92
COG3464	Transposase	Mobilome: prophages, transposons [X]	1.96
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	1.96
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	0.98
COG0534	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	Defense mechanisms [V]	0.98
COG0728	Lipid II flippase MurJ/MviN (peptidoglycan biosynthesis)	Cell wall/membrane/envelope biogenesis [M]	0.98
COG1472	Periplasmic beta-glucosidase and related glycosidases	Carbohydrate transport and metabolism [G]	0.98
COG2244	Membrane protein involved in the export of O-antigen and teichoic acid	Cell wall/membrane/envelope biogenesis [M]	0.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.90 %
Unclassified	root	N/A	45.10 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.92 %
Unclassified	root	N/A	45.10 %
Viruses	superkingdom	All Organisms → Viruses	0.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.92 %
Unclassified	root	N/A	45.10 %
Varidnaviria	clade	All Organisms → Viruses → Varidnaviria	0.98 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	47.06 %
Unclassified	root	N/A	45.10 %
Bamfordvirae	kingdom	All Organisms → Viruses → Varidnaviria → Bamfordvirae	0.98 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	47.06 %
Unclassified	root	N/A	45.10 %
Preplasmiviricota	phylum	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	42.16 %
Maveriviricetes	class	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	4.90 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Priklausovirales	order	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales	0.98 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	3.92 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Lavidaviridae	family	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae	0.98 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.98 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.98 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.98 %
Phycicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus	0.98 %
Mavirus	genus	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → Mavirus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
unclassified Phycicoccus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus	0.98 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.98 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.98 %
Mavirus	genus	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → Mavirus	0.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.10 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.96 %
Phycicoccus sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus → Phycicoccus sp.	0.98 %
Arthrobacter sp. BF1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. BF1	0.98 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.98 %
Mavirus	genus	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → Mavirus	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090004\|P1_DRAFT_NODE_317603_len_1136_cov_13_392606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1186	Open in IMG/M
2088090008\|P3_DRAFT_NODE_21238_len_780_cov_10_288462	Not Available	830	Open in IMG/M
2088090008\|P3_DRAFT_NODE_373369_len_2994_cov_14_418170	All Organisms → cellular organisms → Bacteria	3044	Open in IMG/M
2124908032\|Perma_A_C_ConsensusfromContig243676	Not Available	1028	Open in IMG/M
3300001385\|JGI20193J14888_1034487	Not Available	673	Open in IMG/M
3300001394\|JGI20191J14862_1032306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	789	Open in IMG/M
3300001397\|JGI20177J14857_1003306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3892	Open in IMG/M
3300001453\|JGI20197J15136_1025144	Not Available	505	Open in IMG/M
3300001536\|A1565W1_10437878	Not Available	710	Open in IMG/M
3300001538\|A10PFW1_10235339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1225	Open in IMG/M
3300001871\|JGI24133J20442_1005136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	3867	Open in IMG/M
3300001871\|JGI24133J20442_1049808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	858	Open in IMG/M
3300002068\|JGIcombinedJ21913_10019277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3153	Open in IMG/M
3300002068\|JGIcombinedJ21913_10062727	Not Available	1548	Open in IMG/M
3300002068\|JGIcombinedJ21913_10168905	Not Available	762	Open in IMG/M
3300002069\|JGIcombinedJ21912_10246900	Not Available	578	Open in IMG/M
3300002183\|JGI24145J26757_10035593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1178	Open in IMG/M
3300002183\|JGI24145J26757_10057763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	886	Open in IMG/M
3300002183\|JGI24145J26757_10072541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	774	Open in IMG/M
3300002515\|JGI24144J35610_10079906	All Organisms → Viruses → Varidnaviria → Bamfordvirae → Preplasmiviricota → Maveriviricetes → Priklausovirales → Lavidaviridae → Mavirus	786	Open in IMG/M
3300002538\|JGI24132J36420_10021629	Not Available	2395	Open in IMG/M
3300002538\|JGI24132J36420_10035558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1717	Open in IMG/M
3300002538\|JGI24132J36420_10086949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	880	Open in IMG/M
3300002549\|JGI24130J36418_10005732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4188	Open in IMG/M
3300002549\|JGI24130J36418_10020531	Not Available	2026	Open in IMG/M
3300002549\|JGI24130J36418_10044233	Not Available	1202	Open in IMG/M
3300002549\|JGI24130J36418_10046978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1151	Open in IMG/M
3300002549\|JGI24130J36418_10049694	Not Available	1104	Open in IMG/M
3300002549\|JGI24130J36418_10087519	Not Available	729	Open in IMG/M
3300002550\|JGI24131J36419_10085710	Not Available	805	Open in IMG/M
3300002551\|JGI24135J36437_1042201	Not Available	720	Open in IMG/M
3300002564\|JGI24134J36421_10026976	Not Available	1792	Open in IMG/M
3300002565\|JGI24137J36423_1033310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1330	Open in IMG/M
3300002565\|JGI24137J36423_1103493	Not Available	590	Open in IMG/M
3300002569\|JGI24136J36422_10040206	Not Available	1407	Open in IMG/M
3300003369\|JGI24140J50213_10001070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12298	Open in IMG/M
3300003369\|JGI24140J50213_10002242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8056	Open in IMG/M
3300003369\|JGI24140J50213_10081839	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300003369\|JGI24140J50213_10143745	Not Available	765	Open in IMG/M
3300003369\|JGI24140J50213_10171069	Not Available	686	Open in IMG/M
3300005947\|Ga0066794_10061024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1119	Open in IMG/M
3300005947\|Ga0066794_10099670	Not Available	868	Open in IMG/M
3300005947\|Ga0066794_10237768	Not Available	547	Open in IMG/M
3300005994\|Ga0066789_10001677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9587	Open in IMG/M
3300005994\|Ga0066789_10030532	Not Available	2389	Open in IMG/M
3300006640\|Ga0075527_10079749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	895	Open in IMG/M
3300006642\|Ga0075521_10030628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2261	Open in IMG/M
3300006795\|Ga0075520_1028532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2765	Open in IMG/M
3300006795\|Ga0075520_1179361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	909	Open in IMG/M
3300006864\|Ga0066797_1048753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1490	Open in IMG/M
3300006864\|Ga0066797_1342894	Not Available	523	Open in IMG/M
3300006949\|Ga0075528_10017553	All Organisms → cellular organisms → Bacteria	1764	Open in IMG/M
3300006950\|Ga0075524_10188163	Not Available	898	Open in IMG/M
3300006950\|Ga0075524_10222806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	823	Open in IMG/M
3300006950\|Ga0075524_10346204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300006950\|Ga0075524_10445098	Not Available	574	Open in IMG/M
3300009029\|Ga0066793_10798668	Not Available	536	Open in IMG/M
3300014490\|Ga0182010_10581845	Not Available	624	Open in IMG/M
3300014491\|Ga0182014_10062631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2452	Open in IMG/M
3300014502\|Ga0182021_11618658	Not Available	780	Open in IMG/M
3300025457\|Ga0208850_1000179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	21557	Open in IMG/M
3300025457\|Ga0208850_1000541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	12292	Open in IMG/M
3300025461\|Ga0208851_1003907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3851	Open in IMG/M
3300025479\|Ga0208588_1054665	Not Available	790	Open in IMG/M
3300025481\|Ga0208079_1017771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2230	Open in IMG/M
3300025481\|Ga0208079_1027623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1573	Open in IMG/M
3300025484\|Ga0208587_1023469	Not Available	1869	Open in IMG/M
3300025495\|Ga0207932_1050961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	935	Open in IMG/M
3300025499\|Ga0207931_1030144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1168	Open in IMG/M
3300025548\|Ga0208716_1025313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1394	Open in IMG/M
3300025600\|Ga0209125_1071632	Not Available	968	Open in IMG/M
3300025650\|Ga0209385_1014748	All Organisms → cellular organisms → Bacteria	3218	Open in IMG/M
3300025692\|Ga0209744_1193308	Not Available	626	Open in IMG/M
3300025716\|Ga0209746_1005912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5268	Open in IMG/M
3300025718\|Ga0209123_1169567	Not Available	746	Open in IMG/M
3300025725\|Ga0209638_1240621	Not Available	521	Open in IMG/M
3300025750\|Ga0209747_1059901	Not Available	1389	Open in IMG/M
3300025829\|Ga0209484_10068098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	794	Open in IMG/M
3300025836\|Ga0209748_1045764	Not Available	1832	Open in IMG/M
3300025836\|Ga0209748_1234794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	613	Open in IMG/M
3300025846\|Ga0209538_1086773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. BF1	1281	Open in IMG/M
3300025852\|Ga0209124_10010959	All Organisms → cellular organisms → Bacteria	3535	Open in IMG/M
3300025852\|Ga0209124_10042883	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1878	Open in IMG/M
3300025852\|Ga0209124_10130921	Not Available	1024	Open in IMG/M
3300025852\|Ga0209124_10159117	Not Available	910	Open in IMG/M
3300025854\|Ga0209176_10005377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Phycicoccus → unclassified Phycicoccus → Phycicoccus sp.	2369	Open in IMG/M
3300025857\|Ga0209014_10079601	Not Available	1330	Open in IMG/M
3300025857\|Ga0209014_10181913	Not Available	742	Open in IMG/M
3300025864\|Ga0209429_10194295	Not Available	828	Open in IMG/M
3300025864\|Ga0209429_10353320	Not Available	550	Open in IMG/M
3300025865\|Ga0209226_10132644	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300025878\|Ga0209584_10155791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	862	Open in IMG/M
3300025888\|Ga0209540_10021688	All Organisms → cellular organisms → Bacteria	3967	Open in IMG/M
3300025888\|Ga0209540_10042103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2819	Open in IMG/M
3300025888\|Ga0209540_10115949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1637	Open in IMG/M
3300025888\|Ga0209540_10269328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	980	Open in IMG/M
3300025888\|Ga0209540_10452142	Not Available	687	Open in IMG/M
3300025891\|Ga0209585_10205440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	773	Open in IMG/M
3300025891\|Ga0209585_10359956	Not Available	590	Open in IMG/M
3300026271\|Ga0209880_1003704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4366	Open in IMG/M
3300026291\|Ga0209890_10004447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5988	Open in IMG/M
3300026291\|Ga0209890_10040000	Not Available	1762	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.27%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.73%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	86.27%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	13.73%

Habitat	Taxonomy	Distribution
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	80.39%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	9.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	3.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.96%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.96%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.98%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090004	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P1	Environmental	Open in IMG/M
2088090008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Permafrost Layer P3	Environmental	Open in IMG/M
2124908032	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Perma_all	Environmental	Open in IMG/M
3300001385	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012	Environmental	Open in IMG/M
3300001394	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012	Environmental	Open in IMG/M
3300001397	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012	Environmental	Open in IMG/M
3300001453	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300001871	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311	Environmental	Open in IMG/M
3300002068	Barrow Graham LP Ref core NGADG0004-212 (Barrow Graham LP Ref core NGADG0004-212,NGADG0011-311, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002069	Barrow Graham LP Ref core NGADG0002-212 (Barrow Graham LP Ref core NGADG0002-212,NGADG0004-211, ASSEMBLY_DATE=20131010)	Environmental	Open in IMG/M
3300002183	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A	Environmental	Open in IMG/M
3300002515	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A	Environmental	Open in IMG/M
3300002538	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212	Environmental	Open in IMG/M
3300002549	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212	Environmental	Open in IMG/M
3300002550	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211	Environmental	Open in IMG/M
3300002551	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211	Environmental	Open in IMG/M
3300002564	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-312	Environmental	Open in IMG/M
3300002565	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311	Environmental	Open in IMG/M
3300002569	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300005947	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-190	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006640	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300025457	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025461	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025479	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025481	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025495	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025499	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025548	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-3 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025600	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 11-31A (SPAdes)	Environmental	Open in IMG/M
3300025650	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B (SPAdes)	Environmental	Open in IMG/M
3300025692	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-311 (SPAdes)	Environmental	Open in IMG/M
3300025716	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-211 (SPAdes)	Environmental	Open in IMG/M
3300025718	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-31A (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025829	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B (SPAdes)	Environmental	Open in IMG/M
3300025836	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 004-21A (SPAdes)	Environmental	Open in IMG/M
3300025846	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-211 (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025854	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost305-11B (SPAdes)	Environmental	Open in IMG/M
3300025857	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-212 (SPAdes)	Environmental	Open in IMG/M
3300025864	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0004-212 (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025878	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300026271	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191 (SPAdes)	Environmental	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
P1_DRAFT_00985730	2088090004	Soil	MSTTTTCPAWCNSPHRNGWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA
P3_DRAFT_01259010	2088090008	Soil	MSTTTCPAWCNSPHRNDWDAESHEGPVWPNIASVDGNGGDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA
P3_DRAFT_00659510	2088090008	Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV
Perma_A_C_02826120	2124908032	Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVV
JGI20193J14888_10344872	3300001385	Arctic Peat Soil	GQDRRTSTKGNTTIESNCASGEGGGMSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGLVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV*
JGI20191J14862_10323061	3300001394	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRLA*
JGI20177J14857_10033065	3300001397	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYXSQXGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
JGI20197J15136_10251442	3300001453	Arctic Peat Soil	RAGGQDRRTSTKGNTTIESNCASGEGGGMSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV*
A1565W1_104378781	3300001536	Permafrost	MSTTTCPAWCNSPHRNDWDAESHDGPIWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
A10PFW1_102353392	3300001538	Permafrost	MSTTTCPAWCNSPHRNDWDAESNDGPIWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
JGI24133J20442_10051361	3300001871	Arctic Peat Soil	MSTTTCPAWCNSPHTNDWDAESHDGPVWPNIASVDDNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEA
JGI24133J20442_10498082	3300001871	Arctic Peat Soil	VHEMTARRMSTTTCPAWCNSPHRNDWAAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVV*
JGIcombinedJ21913_100192773	3300002068	Arctic Peat Soil	MSTTTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
JGIcombinedJ21913_100627273	3300002068	Arctic Peat Soil	MSITTCPNWCTSPHMADWDAESHDGPVWPNTASVDGGGDDSVQVGTRYDSQAGLIVTLEAESLMLTPEQAREAALALLEAASWVQXHRVV*
JGIcombinedJ21913_101689051	3300002068	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLVLTPEQARGAALALLEAAFWAEDH
JGIcombinedJ21912_102469001	3300002069	Arctic Peat Soil	MSTTCPAWCNSPHRDDWDAESHDGPVWPNIASVDGNGDGSVQIGTRYTSEAGIVVTLEAQSLILTPEQARGAALAPLEAAFWAEDHH
JGI24145J26757_100355931	3300002183	Arctic Peat Soil	GNTTIESNCASGEGGGMSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV*
JGI24145J26757_100577632	3300002183	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
JGI24145J26757_100725412	3300002183	Arctic Peat Soil	STTCPAWCNSPHRNDWDAESHDGPVWPNIASLDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVI*
JGI24144J35610_100799061	3300002515	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNMASVDGNGDDSVQIGTRYDSQAGIVVTLETQSLILTPEQARGAALALLEAAFWAEDHRVA*
JGI24132J36420_100216293	3300002538	Arctic Peat Soil	MSITTCPNWCTSPHMADWDAESHDGPVWPNTASVDGGGDDSVQVGTRYDSQAGLIVTLEAESLMLTPEQAREAALALLEAASWVQDHRVV*
JGI24132J36420_100355581	3300002538	Arctic Peat Soil	MSATCPAWCSSPHRNDWDAESHDGPVWADIASVDGNGDDSVQIGTRYTSKAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
JGI24132J36420_100869491	3300002538	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV*
JGI24130J36418_100057323	3300002549	Arctic Peat Soil	MSITTCPDWCTSPHVSDWDADGHDGPVWPNIVSLDGGGDDSVQIGTRFHSQAGVVVTLEAQSLMLTPEQARGAALALLEAASWVKDHRVL*
JGI24130J36418_100205314	3300002549	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGLVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV*
JGI24130J36418_100442333	3300002549	Arctic Peat Soil	MSTTCPTWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHPQAGIVVTLEAQSLILTPAQARGAALALLEAASWAKDHRVSEDTRAPSLVRLRA
JGI24130J36418_100469783	3300002549	Arctic Peat Soil	MSTTCPAWCNSPHRDDWDAESHDGPVWPNIASVDGNGDGSVQIGTRYTSEAGIVVTLEAQSLILTPEQARGAALAPLEAAFWAEDHHVA*
JGI24130J36418_100496942	3300002549	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHSQGGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
JGI24130J36418_100875191	3300002549	Arctic Peat Soil	GMSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASLDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAAAWAKDHRVI*
JGI24131J36419_100857101	3300002550	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
JGI24135J36437_10422011	3300002551	Arctic Peat Soil	MSTTCPAWCNSPHTNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
JGI24134J36421_100269764	3300002564	Arctic Peat Soil	MSTTTCPAWCNSPHTNDWDAESHDGPVWPNIASVDDNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHCVV*
JGI24137J36423_10333102	3300002565	Arctic Peat Soil	MSTTTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPQQARGAALALLEAAFWAEDHRVA*
JGI24137J36423_11034931	3300002565	Arctic Peat Soil	VHEMTARRMSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
JGI24136J36422_100402062	3300002569	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPIWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVV*
JGI24140J50213_100010702	3300003369	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHSQGGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
JGI24140J50213_1000224210	3300003369	Arctic Peat Soil	MSITTCPDWCTSPHVSDWDADGHDGPVWPNIVSVDGGGDDSVQIGTRFHSQAGVVVTLEAQSLMLTPEQARGAALALLEAASWVKDHRVL*
JGI24140J50213_100818391	3300003369	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASLDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALA
JGI24140J50213_101437452	3300003369	Arctic Peat Soil	MRLRAGGQDRRTSTKGNTTIESNCASGEGGGMSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGLVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV
JGI24140J50213_101710691	3300003369	Arctic Peat Soil	MAAKEMSATCPLWCNSRHSNDWDAEIHDGPVWPNIESVDGNGDDSVQIGTRYDPQAGMVVTLEAQSLILTPEQARGAALALIEAASWAKEHRCL*
Ga0066794_100610243	3300005947	Soil	MSTTCPAWCNSPHRDDWDAESHDGPVWPNIASVDGNGDGSVQIGTRYTSEAGIVTLEAQSLILTPEQARGAALAPLEAAFWAEDHHVA*
Ga0066794_100996702	3300005947	Soil	MSTTTCPAWCNSPHTNDWDAESHDGPVWPNIASVDDNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAA
Ga0066794_102377682	3300005947	Soil	TCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV*
Ga0066789_100016774	3300005994	Soil	MSTTCPAWCNSPHKNDWDAESHDGPVWPNIASEDGNGDDSVQIGTRYHSEAGIVVTLNAQSLILTPEQARAAALALLEAASWAKDHRVV*
Ga0066789_100305324	3300005994	Soil	MSTTCPAWCNSPHRNEWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHSQVSIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV*
Ga0075527_100797491	3300006640	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASLDGNGDDSVQIGTRYHSQAGIVVTLEAQSLLLTPEQARGAALALLEAASWAKDHHVI*
Ga0075521_100306282	3300006642	Arctic Peat Soil	MSTSCPVWCNSPHRNDWDAESHDGPVWPNVASVDGNGDDSVQIGTRYHSQGGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
Ga0075520_10285325	3300006795	Arctic Peat Soil	MSTTCPTWCNSPHRNDWDAESHDGPVWPSIASVDGNGDDSVQIGTRYQSQVGLVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV*
Ga0075520_11793612	3300006795	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASLDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVI*
Ga0066797_10487532	3300006864	Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
Ga0066797_13428942	3300006864	Soil	MSITTCPDWCTSPHVSDWDADGHDGPVWPNIVSLDGGGDDSVQIGTRFHSQAGVVVTIEAQSLMLTPEQARGAALALLEAASWVKDHRVL*
Ga0075528_100175532	3300006949	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASLDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHHVI*
Ga0075524_101881631	3300006950	Arctic Peat Soil	MSTTCPAWCTSPHVSDWDADGHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
Ga0075524_102228061	3300006950	Arctic Peat Soil	MSTTTCPAWCNSPHMNDWDAESHDGPVWPDIASVGDNGDDSVQIGTRYHSQAGIVVTLEVQSLTLTPEQARGAALALLEAAFWAEDHRVI*
Ga0075524_103462041	3300006950	Arctic Peat Soil	WCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALSLLEAAFWAEDHCVA*
Ga0075524_104450982	3300006950	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGLVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
Ga0066793_107986681	3300009029	Prmafrost Soil	MSTTTCPAWCNSPHRNDWDAESHNGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA*
Ga0182010_105818452	3300014490	Fen	MSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASLDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAAWAKDHRVI*
Ga0182014_100626313	3300014491	Bog	MSITCPAWCNSPHRDDWDVESHDGPVWPNIASVDGNGDDSVQIGTRYTSEAGIVVTLEAQSLIMTPEQARGAALALLEAAFWAEDHHVA*
Ga0182021_116186583	3300014502	Fen	MSITICPDWCTSPHMADWDAESHDGPVWPNIASVDGGGDDSVQVGTRFDSQAGLVVTLEAESLMLTSEQAREAALALLEAASWVKDHRVV*
Ga0208850_100017919	3300025457	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHSQGGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA
Ga0208850_10005415	3300025457	Arctic Peat Soil	MSITTCPDWCTSPHVSDWDADGHDGPVWPNIVSLDGGGDDSVQIGTRFHSQAGVVVTLEAQSLMLTPEQARGAALALLEAASWVKDHRVL
Ga0208851_10039075	3300025461	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHPQAGLVVTLEAQSLILTPEQARAAALALLEAASWAKDHPIA
Ga0208588_10546651	3300025479	Arctic Peat Soil	MTAQGISTTPCPPWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHPQAGLVVTLEAQSLILTPEQARAAALALLEAASWAKDHPIA
Ga0208079_10177714	3300025481	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGLVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV
Ga0208079_10276232	3300025481	Arctic Peat Soil	MSTTCPAWCNSPHRDDWDAESHDGPVWPNIASVDGNGDGSVQIGTRYTSEAGIVVTLEAQSLILTPEQARGAALAPLEAAFWAEDHHVA
Ga0208587_10234694	3300025484	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGLVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA
Ga0207932_10509611	3300025495	Arctic Peat Soil	PHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV
Ga0207931_10301442	3300025499	Arctic Peat Soil	TCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV
Ga0208716_10253132	3300025548	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVV
Ga0209125_10716321	3300025600	Arctic Peat Soil	MSTTTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA
Ga0209385_10147482	3300025650	Arctic Peat Soil	MSITTCPNWCTSPHMADWDAESHDGPVWPNTASVDGGGDDSVQVGTRYDSQAGLIVTLEAESLMLTPEQAREAALALLEAASWVQDHRVV
Ga0209744_11933081	3300025692	Arctic Peat Soil	MSTTTCPAWCNSPHTNDWDAESHDGPVWPNIASVDDNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALVLLEAAF
Ga0209746_10059121	3300025716	Arctic Peat Soil	MSTTCPAWCNSPHTNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVV
Ga0209123_11695672	3300025718	Arctic Peat Soil	VHEMTARRMSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA
Ga0209638_12406212	3300025725	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASLDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHHVI
Ga0209747_10599012	3300025750	Arctic Peat Soil	MSTTTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPQQARGAALALLEAAFWAEDHRVA
Ga0209484_100680981	3300025829	Arctic Peat Soil	TCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGLVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV
Ga0209748_10457642	3300025836	Arctic Peat Soil	MSATCPAWCSSPHRNDWDAESHDGPVWADIASVDGNGDDSVQIGTRYTSKAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA
Ga0209748_12347941	3300025836	Arctic Peat Soil	DDGDGMSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASLDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVI
Ga0209538_10867731	3300025846	Arctic Peat Soil	TTCPAWCNSPHRNDWDAESHDGPVWPNIASVHGNGDDSVQIGTRHDSQAGIVVTLETQSLVLTPEQARGAALALLEAAFWAEDHRVA
Ga0209124_100109596	3300025852	Arctic Peat Soil	MSITTCPGWCTSPHMADWDAESHDGPVWPNIASVDGGGDDSVQVGTRYDSQAGLIVTLEAESLMLTPEQAREAALALLEAASWVQDHRVV
Ga0209124_100428832	3300025852	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASLDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVI
Ga0209124_101309212	3300025852	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHHVV
Ga0209124_101591172	3300025852	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPDIASVGDNGDDSVQIGTRYHSQAGIVVTLEVQSLTLTPEQARGAA
Ga0209176_100053774	3300025854	Arctic Peat Soil	MSITTCPDWCTSPHVSDWDADGHDGPVWPNIVSVDGGGDDSVQIGTRFHSQAGVVVTIEAQSLMLTPEQARGAALALLEAASWVKDHRVL
Ga0209014_100796013	3300025857	Arctic Peat Soil	MSITTCPDWCTSPHMADWDDESHDGPVWPNIASVDGGGDDSVQVGTRYDSQAGLIVTLEAESLMLTPEQAREAALALLEAASWVQDHRVV
Ga0209014_101819131	3300025857	Arctic Peat Soil	STTTCPAWCNSPHRNDWDAESHDGPVWPNIASLDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAAAWAKDHRVI
Ga0209429_101942952	3300025864	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA
Ga0209429_103533201	3300025864	Arctic Peat Soil	DWCTSPHVSDWDADGHDGPVWPNIVSLDGGGDDSVQIGTRFHSQAGVVVTLEAQSLMLTPEQARGAALALLEAASWVKDHRVL
Ga0209226_101326441	3300025865	Arctic Peat Soil	RNDWDAESHDGPIWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVV
Ga0209584_101557911	3300025878	Arctic Peat Soil	NDWDAENHDGPVWPNIASVGDNGDDSVQIGTRYHSQAGIVVTLEVQSLILTPEQARGAALALLEAAFWAEDHRVI
Ga0209540_100216881	3300025888	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASLDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRLA
Ga0209540_100421032	3300025888	Arctic Peat Soil	MRLRAGGQDRRTSTKGNTTIESNCASGEGGGMSTTCPAWCNSPHRNDWDAESHDGPVWPNIASVDGNGDDSVQIGTRYQSQVGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV
Ga0209540_101159493	3300025888	Arctic Peat Soil	MSTTTCPAWCNSPHRNDWDAESHDGPVWPDIASVGDNGDDSVQIGTRYHSQAGIVVTLEVQSLILTPEQARGAALALLEAAFWAEDHRVI
Ga0209540_102693281	3300025888	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNIASLDGNGDDSVQIGTRYHSQAGIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVI
Ga0209540_104521421	3300025888	Arctic Peat Soil	MSTTCPAWCNSPHRNDWDAESHDGPVWPNMASVDGNGDDSVQIGTRYDSQAGIVVTLETQSLILTPEQARGAALALLEAAFWAEDHRVA
Ga0209585_102054401	3300025891	Arctic Peat Soil	MSTTTCPAWCNSPHMNDWDAESHDGPVWPDIASVGDNGDDSVQIGTRYHSQAGIVVTLEVQSLTLTPEQARGAALALLEAAFWAEDHRVI
Ga0209585_103599561	3300025891	Arctic Peat Soil	MSTTTCPAWCNSPHRNGWDAESHDGPVWPNIASVDGNGDDSVQIGTRYDSQAGIVVTLEAQSLILTPEQARGAALALLEAAFWAEDHRVA
Ga0209880_10037044	3300026271	Soil	MSITTCPDWCTSPHVSDWDADGHDGPVWPNIVSLDGGGDDSVQIGTRFHSQAGVVVTIEAQSLMLTPEQARGAALALLEAASWVKDHRVL
Ga0209890_100044476	3300026291	Soil	MSTTCPAWCNSPHKNDWDAESHDGPVWPNIASEDGNGDDSVQIGTRYHSEAGIVVTLNAQSLILTPEQARAAALALLEAASWAKDHRVV
Ga0209890_100400002	3300026291	Soil	MSTTCPAWCNSPHRNEWDAESHDGPVWPNIASVDGNGDDSVQIGTRYHSQVSIVVTLEAQSLILTPEQARGAALALLEAASWAKDHRVV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102127

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences