Metagenome Family F102147

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102147
Family Type	Metagenome
Number of Sequences	102
Average Sequence Length	59 residues
Representative Sequence	EAAYIRQPGLLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA
Number of Associated Samples	86
Number of Associated Scaffolds	102

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.99 %
% of genes near scaffold ends (potentially truncated)	98.04 %
% of genes from short scaffolds (< 2000 bps)	90.20 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.039 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (31.372 % of family members)
Environment Ontology (ENVO)	Unclassified (53.922 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.510 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.98% β-sheet: 1.69% Coil/Unstructured: 59.32%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 102 Family Scaffolds
PF02811	PHP	69.61
PF07733	DNA_pol3_alpha	10.78
PF14579	HHH_6	2.94
PF07690	MFS_1	0.98
PF00155	Aminotran_1_2	0.98
PF02541	Ppx-GppA	0.98
PF12698	ABC2_membrane_3	0.98
PF00005	ABC_tran	0.98
PF03061	4HBT	0.98

COG ID	Name	Functional Category	% Frequency in 102 Family Scaffolds
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	10.78
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	10.78
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	1.96

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.04 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.04 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.04 %
Unclassified	root	N/A	1.96 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	53.92 %
Unclassified	root	N/A	1.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	52.94 %
Unclassified	root	N/A	1.96 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.98 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.98 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	50.00 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	2.94 %
Unclassified	root	N/A	1.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	50.00 %
Sphaerobacteridae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae	1.96 %
Unclassified	root	N/A	1.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	50.00 %
Sphaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales	1.96 %
Unclassified	root	N/A	1.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	50.00 %
Sphaerobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae	1.96 %
Unclassified	root	N/A	1.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	50.00 %
Sphaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	1.96 %
Unclassified	root	N/A	1.96 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	50.00 %
Unclassified	root	N/A	1.96 %
Sphaerobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.98 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	50.00 %
Unclassified	root	N/A	1.96 %
Sphaerobacter thermophilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	0.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.98 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908016\|OU_2_1_1_newblercontig84403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	614	Open in IMG/M
3300001145\|JGI12682J13319_1015424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300001369\|JGI12701J14581_1010954	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300001545\|JGI12630J15595_10002267	All Organisms → cellular organisms → Bacteria	4196	Open in IMG/M
3300001661\|JGI12053J15887_10386996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	673	Open in IMG/M
3300001661\|JGI12053J15887_10471911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	600	Open in IMG/M
3300001661\|JGI12053J15887_10503189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	578	Open in IMG/M
3300002245\|JGIcombinedJ26739_101407105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	591	Open in IMG/M
3300002557\|JGI25381J37097_1091062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300002558\|JGI25385J37094_10096261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	886	Open in IMG/M
3300002561\|JGI25384J37096_10075926	All Organisms → cellular organisms → Bacteria	1224	Open in IMG/M
3300002562\|JGI25382J37095_10274662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300002853\|draft_1018456	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300005171\|Ga0066677_10017906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae → Sphaerobacter → Sphaerobacter thermophilus	3221	Open in IMG/M
3300005171\|Ga0066677_10250870	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300005171\|Ga0066677_10756468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	540	Open in IMG/M
3300005171\|Ga0066677_10826527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300005175\|Ga0066673_10146162	All Organisms → cellular organisms → Bacteria	1312	Open in IMG/M
3300005178\|Ga0066688_10258842	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300005181\|Ga0066678_10253152	All Organisms → cellular organisms → Bacteria	1139	Open in IMG/M
3300005187\|Ga0066675_10331533	All Organisms → cellular organisms → Bacteria	1108	Open in IMG/M
3300005436\|Ga0070713_101861332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	584	Open in IMG/M
3300005436\|Ga0070713_101886003	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300005445\|Ga0070708_101345798	All Organisms → cellular organisms → Bacteria	667	Open in IMG/M
3300005446\|Ga0066686_10271883	All Organisms → cellular organisms → Bacteria	1147	Open in IMG/M
3300005446\|Ga0066686_10360855	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300005447\|Ga0066689_10712237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Sphaerobacteridae → Sphaerobacterales → Sphaerobacterineae → Sphaerobacteraceae	627	Open in IMG/M
3300005471\|Ga0070698_100615756	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300005471\|Ga0070698_100762857	All Organisms → cellular organisms → Bacteria	911	Open in IMG/M
3300005518\|Ga0070699_100600324	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300005552\|Ga0066701_10698727	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300005553\|Ga0066695_10859607	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005554\|Ga0066661_10834856	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300005555\|Ga0066692_10688748	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005559\|Ga0066700_10316976	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300005559\|Ga0066700_11042857	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005575\|Ga0066702_10495317	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300005587\|Ga0066654_10178539	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300005937\|Ga0081455_10425552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300006032\|Ga0066696_10125240	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300006032\|Ga0066696_10559412	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300006794\|Ga0066658_10216841	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300006794\|Ga0066658_10812306	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300006800\|Ga0066660_11300423	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300009012\|Ga0066710_103814006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	565	Open in IMG/M
3300009038\|Ga0099829_10539970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	969	Open in IMG/M
3300009137\|Ga0066709_100050043	All Organisms → cellular organisms → Bacteria	4706	Open in IMG/M
3300009137\|Ga0066709_104193770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300010301\|Ga0134070_10125980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	906	Open in IMG/M
3300010303\|Ga0134082_10206396	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	805	Open in IMG/M
3300010321\|Ga0134067_10336454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	591	Open in IMG/M
3300010323\|Ga0134086_10268302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	654	Open in IMG/M
3300010329\|Ga0134111_10454821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	556	Open in IMG/M
3300010335\|Ga0134063_10085516	All Organisms → cellular organisms → Bacteria	1418	Open in IMG/M
3300010337\|Ga0134062_10083690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1349	Open in IMG/M
3300010337\|Ga0134062_10163164	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300011271\|Ga0137393_10186655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1745	Open in IMG/M
3300011992\|Ga0120146_1021852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1190	Open in IMG/M
3300012096\|Ga0137389_10004422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8894	Open in IMG/M
3300012189\|Ga0137388_10286372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1508	Open in IMG/M
3300012200\|Ga0137382_10689914	All Organisms → cellular organisms → Bacteria	732	Open in IMG/M
3300012207\|Ga0137381_10219010	All Organisms → cellular organisms → Bacteria	1651	Open in IMG/M
3300012208\|Ga0137376_10464682	All Organisms → cellular organisms → Bacteria	1098	Open in IMG/M
3300012917\|Ga0137395_10010707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	4996	Open in IMG/M
3300012977\|Ga0134087_10325734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	727	Open in IMG/M
3300013772\|Ga0120158_10427110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300014052\|Ga0120109_1160695	Not Available	526	Open in IMG/M
3300014150\|Ga0134081_10156730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	751	Open in IMG/M
3300015241\|Ga0137418_10147526	All Organisms → cellular organisms → Bacteria	2076	Open in IMG/M
3300015241\|Ga0137418_10659547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	810	Open in IMG/M
3300015356\|Ga0134073_10080682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	929	Open in IMG/M
3300018431\|Ga0066655_11015737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	574	Open in IMG/M
3300018433\|Ga0066667_10091622	All Organisms → cellular organisms → Bacteria	1994	Open in IMG/M
3300019888\|Ga0193751_1140065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	880	Open in IMG/M
3300026301\|Ga0209238_1074241	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300026308\|Ga0209265_1018111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2186	Open in IMG/M
3300026313\|Ga0209761_1230998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	760	Open in IMG/M
3300026314\|Ga0209268_1062519	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300026325\|Ga0209152_10415507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	532	Open in IMG/M
3300026325\|Ga0209152_10452825	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300026328\|Ga0209802_1228664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	672	Open in IMG/M
3300026331\|Ga0209267_1165639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	895	Open in IMG/M
3300026331\|Ga0209267_1181398	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300026523\|Ga0209808_1152310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	886	Open in IMG/M
3300026532\|Ga0209160_1048625	All Organisms → cellular organisms → Bacteria	2474	Open in IMG/M
3300026537\|Ga0209157_1303942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	584	Open in IMG/M
3300026548\|Ga0209161_10203761	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300026551\|Ga0209648_10811908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300026880\|Ga0209623_1014469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300027181\|Ga0208997_1051326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	613	Open in IMG/M
3300027521\|Ga0209524_1027027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1196	Open in IMG/M
3300027663\|Ga0208990_1202257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300027678\|Ga0209011_1034536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1593	Open in IMG/M
3300027681\|Ga0208991_1218741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	548	Open in IMG/M
3300027748\|Ga0209689_1328649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	587	Open in IMG/M
3300027875\|Ga0209283_10141312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1594	Open in IMG/M
3300027882\|Ga0209590_10002208	All Organisms → cellular organisms → Bacteria	7751	Open in IMG/M
3300027903\|Ga0209488_10322237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1152	Open in IMG/M
3300031962\|Ga0307479_11086970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	766	Open in IMG/M
3300032180\|Ga0307471_102452604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	659	Open in IMG/M
3300032205\|Ga0307472_100141245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1742	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.02%
Host-Associated	Host-Associated	0.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	98.04%
Unclassified	Environmental → Unclassified	0.98%
Plants	Host-Associated → Plants	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.04%
Unclassified	Environmental → Unclassified → Unclassified	0.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.51%
Loam	Environmental → Terrestrial → Soil → Loam	23.53%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified	0.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.98%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	43.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.88%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.94%
Unclassified	Environmental → Unclassified → Unclassified → Unclassified → Unclassified	0.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	31.37%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.75%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.75%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	11.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.78%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.88%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.90%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.94%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.98%
Hydrocarbon Resource Environments	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Hydrocarbon Resource Environments	0.98%
	Environmental → Unclassified → Unclassified → Unclassified → Unclassified →	0.98%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.98%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908016	Sample 642	Environmental	Open in IMG/M
3300001145	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2	Environmental	Open in IMG/M
3300001369	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1	Environmental	Open in IMG/M
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002853	PDIso9.ppmwps2	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026880	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
OU_00956480	2124908016		IRRDGLVESIADAVARLQEEYGASLVQRAEVDLNAAPVPEHRILWKPA
JGI12682J13319_10154243	3300001145	Forest Soil	PAYVRQPGLLVRRDGFKESIADAVARLQEEYGPTLVQRAEVRSDAAPLPDHRILWKPA*
JGI12701J14581_10109543	3300001369	Forest Soil	GRLEAAYVRQPGLLIRSDSFKESIADAVARLQEEYGPSLVQRAEVRSDAAPLADHRILWKPA*
JGI12630J15595_100022675	3300001545	Forest Soil	VRSDSFKESIADAVARLQEEYGPSLVQRAEVRSDAAPLPDHRILWKPA*
JGI12053J15887_103869963	3300001661	Forest Soil	RLEAAYVRQPGLLIRRDGFKESIADAVARLQEEYGPSLVQRAEVHRDAAPLPDHRILWKPA*
JGI12053J15887_104719111	3300001661	Forest Soil	QPGLLIRRDGFKEAIADAVARLQEEYGPSLVQRAEVRSDAAPLPDHRILWKPA*
JGI12053J15887_105031893	3300001661	Forest Soil	LLVRSDSFKESIADAVARLQEEYGPSLVQRAEVRSDAAPLPDHRILWKPA*
JGIcombinedJ26739_1014071051	3300002245	Forest Soil	EPAYVRQPGLLVRRDGFKESIADAVARLQEEYGPSLVQRAEVRGDAAPLPDHRILWKPA*
JGI25381J37097_10910621	3300002557	Grasslands Soil	RITLRAGRLEPAYIRQPGLLIRRDGFQESIADAVARLQEEYGSLMVQRAEVRSDAAPLPDHRILWKPA*
JGI25385J37094_100962613	3300002558	Grasslands Soil	RQPGLLIRRDGFKESIADAVARLQEEYGSSLIQRVEVHADAAPLVDHRILWKPA*
JGI25384J37096_100759261	3300002561	Grasslands Soil	QPGLLIRRDGFKESIADAVARLQEEYGPSLVQRAELRSDAAPLPDHRILWKPA*
JGI25382J37095_102746622	3300002562	Grasslands Soil	AAYVRQPGLLIRRDGFKESIADAVARLQEEYGSSLVQRAEVHADAAPLVDHRILWKPA*
draft_10184563	3300002853	Hydrocarbon Resource Environments	RLEPGYVRQPGLLLRRDGFQESLADAIARLQEEYRPELVQRASLRQDAPPLPDRRILWKPA*
Ga0066677_100179063	3300005171	Soil	SIVAPLERITLRAGRLEAAYIRQPGLLMRRDGFKESIADAIARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0066677_102508703	3300005171	Soil	ESIADAVARLQEEYGPSLIQRAEVRPDAAPLVDHRILWKPA*
Ga0066677_107564681	3300005171	Soil	APLERITLRAGRLEPAYIRQPGLLIRRDGFQESIADAVARLQEEYGAPVVQRAEVRSDAVLLPDHRILWKPA*
Ga0066677_108265272	3300005171	Soil	SIVAPLERITLRAGRLEAAYIRQPGLLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRIRWKPA*
Ga0066673_101461623	3300005175	Soil	RITLRAGRLEAAYIRQPGLLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0066688_102588421	3300005178	Soil	PLERITLRAGRLEAAYIRQPGLLMRRDGFKESIADAIARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0066678_102531523	3300005181	Soil	LLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0066675_103315331	3300005187	Soil	LERITLRAGRLEAAYVRQPGLLIRRDGFKESIADAVARLQEEYGPSLVQRAEVHADAAPLVDHRILWKPA*
Ga0070713_1018613322	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	IRPRLLRASITAPLERITLRAGRLESAYVRQPGLLVRRDGFKESIADAIARLQEEYGPSLVQRAEVRSDAAPLPDHRILWKPA*
Ga0070713_1018860031	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	TLRAGRLEPAYVRQPGLLIRRDGLKESIADAIARLQEEYGPSLVQRAEVRPDAAPLPDHRVLWKPA*
Ga0070708_1013457981	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	IADAVARLQEEYGPSLVQRAEVRSDAAPLPDHRILWKPA*
Ga0066686_102718831	3300005446	Soil	PLERITLRAGRLEAAYVRQPGLLIRRDGFKESIADAVARLQEEYGPSLVQRAEVQADAAPLADHRVLWKPA*
Ga0066686_103608551	3300005446	Soil	APLERITLRAGRLEAAYVRQPGLLIRRDGFKESIADAVARLQEEYGSSLVQRAEVHADAAPLVDHRILWKPA*
Ga0066689_107122371	3300005447	Soil	LLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRIRWKPA*
Ga0070698_1006157563	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	YVRQPGLLIRRDGFKESIADAVARLQEEYGTSLIQRAEVRSGAAPLPDHRILWKPA*
Ga0070698_1007628571	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	IRPRLLRASISAPLERISLRAGRLEPAYVRQPGLLVRRDGFKESIADAVARLQEEYGPSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0070699_1006003243	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	FKESIADAVARLQEEYGPSLVQRAEVNSDAAPLADHRILWKPA*
Ga0066701_106987273	3300005552	Soil	EAAYIRQPGLLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0066695_108596071	3300005553	Soil	ADAVARLQEEYGPSLVQRAEVHADAAPLVDHRILWKPA*
Ga0066661_108348561	3300005554	Soil	LLMRRDGFKESIADAIARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0066692_106887483	3300005555	Soil	SIVAPLERITLRASRLEAAYVRQPGLLIRRDGFKESIADAVARLQEEYSPSLVQRAEVRSDAAPLPDHRILWKPA*
Ga0066700_103169761	3300005559	Soil	ARLQEEYGSSLVQRAEVRIDAAPLPDHRILWKPA*
Ga0066700_110428573	3300005559	Soil	RITLRAGRLEAAYIRQPGLLMRRDGFKESIADAIARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0066702_104953171	3300005575	Soil	RLEPGYVRQPGLLIRRDGFTESIADAVARLQEEYGSSLVQRAEVRADAAPLPDHRVRWRPA*
Ga0066654_101785393	3300005587	Soil	LIRRDGFKESIADAVARLQEEYGSSLVQRAEVHADAAPIVDHRILWKPA*
Ga0081455_104255521	3300005937	Tabebuia Heterophylla Rhizosphere	RLEPAYVRQPGLLMRSDGFQESIADAVARLQEEHGASLLQRAEVRPDAAPIPEQRILWKPA*
Ga0066696_101252403	3300006032	Soil	LERITLRAGRLEAAYIRQPGLLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRIRWKPA*
Ga0066696_105594121	3300006032	Soil	LERITLRAGRLEAAYIRQPGLLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0066658_102168411	3300006794	Soil	TAPLERITLMARRLGPAHVRQPGLLVRRDGFRESLADAVLRLQEEFRPDLVQRATLLTGVAPLPGKRIRWQPA*
Ga0066658_108123063	3300006794	Soil	AVARLQEEYGAPVVQRAEVRSDAVLLPDHRILWKPA*
Ga0066660_113004231	3300006800	Soil	ESIADAVARLQEEYGASLVQRAEVHPDAAPLPDHRILWKPA*
Ga0066710_1038140061	3300009012	Grasslands Soil	GLLLRRDGFQESIADAIARLQEEYGPWLLQRAEVRMDAIPLPQHRILWKPA
Ga0099829_105399703	3300009038	Vadose Zone Soil	PLERITLRAGRLEAAYVRQPGLLIRRDGFKEAIADAVARLQEEYGPSLVQRAEVRSDAAPLPDHRILWKPA*
Ga0066709_1000500431	3300009137	Grasslands Soil	IRPRLLRASIVAPLERITLRAGRLEAAYVRQPGLLIRRDGFKESIADAVARLQEEYGPSLVQRAEVQADAAPLADHRVLWKPA*
Ga0066709_1041937701	3300009137	Grasslands Soil	AAPLERITLRAGGLEPTHVRQPGLLIRRDGFKESIADAVARLQEEYGPSLVQRAAVRSHAAPRPDHRILWKPA*
Ga0134070_101259801	3300010301	Grasslands Soil	RRDGFKESIADAVARLQEEYGSSLIQRVEVHADAAPLVDHRILWKPA*
Ga0134082_102063963	3300010303	Grasslands Soil	FKESIADAVARLQEEYGPSLVQRADVQADAAPLADHRVLWKPA*
Ga0134067_103364541	3300010321	Grasslands Soil	ITLRAGRLEAAYVRQPGLLIRRDGFKESIADAVARLQEEYGPSLVQRAEVHADAAPLVDHRILWKPA*
Ga0134086_102683023	3300010323	Grasslands Soil	LLAASIVAPLERITLCAGRLEAAYVRQPGLLIRRDGFKESIADAVARLQEEYGPSLVQRAEVHADAAPLVDHRILWKPA*
Ga0134111_104548211	3300010329	Grasslands Soil	PGLLIRRDGFKESIADAVARLQEEYGSSLIQRVEVHADAAPLVDHRILWKPA*
Ga0134063_100855161	3300010335	Grasslands Soil	FKESIADAIARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0134062_100836903	3300010337	Grasslands Soil	DGFKESIADAVARLQEEYGSSLVQRAEVHADAAPIVDHRILWKPA*
Ga0134062_101631641	3300010337	Grasslands Soil	DAVARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0137393_101866551	3300011271	Vadose Zone Soil	QPGLLVRRDGFKESIADAVARLQEEYGTSLIQRAEVRSDAAPLPDHRILWKPA*
Ga0120146_10218523	3300011992	Permafrost	LLRRDGLKESLADAVARLQEEYGPGLVQRASLRDDAPPLPERRILWTPA*
Ga0137389_100044221	3300012096	Vadose Zone Soil	LTARSLEPIYVRQPGLLLRRDGFQESLADAVLRLKEEYRPELVQRAARVETAPPLADRRFRWTSA*
Ga0137388_102863723	3300012189	Vadose Zone Soil	KESIADAVARLQEEYGPSLVQRAEVRSDAAPLPDHRILWKPA*
Ga0137382_106899143	3300012200	Vadose Zone Soil	APLERITLRAGRLEAAYIRQPGLLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0137381_102190101	3300012207	Vadose Zone Soil	GRLEAAYIRQPGLLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0137376_104646823	3300012208	Vadose Zone Soil	LLVRRDGFKESIADAVARLQEEYGPSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0137395_100107071	3300012917	Vadose Zone Soil	RAGRLEAAYIRQPGLLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0134087_103257341	3300012977	Grasslands Soil	MRRDGFKESIADAIARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA*
Ga0120158_104271101	3300013772	Permafrost	EPAFVRQPGLLIRRDGFKESIADAVARLQEEYGPSLVQRAEVRSDAAPLPDHRILWKPA*
Ga0120109_11606951	3300014052	Permafrost	RAGRLEAAYVRQPGLLLRRDGLKESLADAVARLQEEYGAGLVQRASLRDDAPPLPERRILWTPA*
Ga0134081_101567303	3300014150	Grasslands Soil	AYVRQPGLLIRRDGFKESIADAVARLQEEYGPSLVQRTEVHADAAPLVDHRILWKPA*
Ga0137418_101475261	3300015241	Vadose Zone Soil	ERITLRAGRLEPAYVRQPGLLVRRDGFKESIADAVARLQEEYGPSLVLRAEVRRDAAPLPDHRILWKPA*
Ga0137418_106595473	3300015241	Vadose Zone Soil	PLERITLRAGRLEAAYVRQPGLLIRRDGFKESIADAVARLQEEYGPSLVQRAEVHRDAAPLPDHRILWKPA*
Ga0134073_100806823	3300015356	Grasslands Soil	IADAVARLQEEYGPSLVQRAEVQADAAPLADHRVLWKPA*
Ga0066655_110157373	3300018431	Grasslands Soil	MPLRAGLTNDAYVGQPGLLSRRDGCKESIADAVARLQEEYGPSLVQRAEVHADAAPLVDHRILWRPA
Ga0066667_100916223	3300018433	Grasslands Soil	PLERITLRAGRLEAAYIRQPGLLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRIRWKPA
Ga0193751_11400653	3300019888	Soil	RLLRASITAPLERITLRAGRLEPAYVRQPGLLVRNDSFNESIADAVARLQEEYGASLVQRAEVRSDAAPLPDHRILWKPA
Ga0209238_10742411	3300026301	Grasslands Soil	GRLEPAYVRQPGLLVRRDGFKESIADAVARLQEEYGPSLVQRAEVRRDAAPLPDHRILWKPA
Ga0209265_10181111	3300026308	Soil	EAAYVRQPGLLIRRDGFKESIADAVARLQEEYGSSLVQRAEVHADAAPIVDHRILWKPA
Ga0209761_12309983	3300026313	Grasslands Soil	LLIRRDGFKESIADAVARLQEEYSPSLVQRAEVRSDAAPLPDHRILWKPA
Ga0209268_10625193	3300026314	Soil	ERITLRAGRLEAAYIRQPGLLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA
Ga0209152_104155071	3300026325	Soil	DAVARLQEEYGAPVVQRAEVRSDAVLLPDHRILWKPA
Ga0209152_104528251	3300026325	Soil	ADAIARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA
Ga0209802_12286641	3300026328	Soil	PGLLVRSDSFKESIADAVARLQEEYGPSLVQRAEVRSDAAPLPDHRILWKPA
Ga0209267_11656393	3300026331	Soil	RAGRLEAAYVRQPGLLIRRDGFKESIADAVARLQEEYGPSLVQRAEVQADAAPLADHRVLWKPA
Ga0209267_11813983	3300026331	Soil	ERITLRAGRLEAAYIRQPGLLMRRDGFKESIADAIARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA
Ga0209808_11523101	3300026523	Soil	GRLEAAYVRQPGLLIRRDGFKESIADAVARLQEEYGPSLVQRAEVHADAAPLVDHRILWKPA
Ga0209690_10799303	3300026524	Soil	ELFDGIRPRLLRASIVAPLERITLRAGRLEAAYIRQPGLLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRIRWKPA
Ga0209160_10486253	3300026532	Soil	RITLRAGRLEAAYIRQPGLLMRRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRIRWKPA
Ga0209157_13039421	3300026537	Soil	KESIADAVARLQEEYGSSLVQRAEVHADAAPLVDHRILWKPA
Ga0209161_102037613	3300026548	Soil	RRDGFKESIADAVARLQEEYGSSLVQRAEVRRDAAPLPDHRIRWKPA
Ga0209648_108119081	3300026551	Grasslands Soil	YVRQPGLLIRRDSFKESIADAVARLQEEYGASLVQRAEVRSDAAPLPDHRILWKPA
Ga0209623_10144693	3300026880	Forest Soil	EPAYVRQPGLLVRSDSFKESIADAVARLQEEYGPSLVQCAEVRSDAAPLPDHRILWKPA
Ga0208997_10513263	3300027181	Forest Soil	VRQPGLLIRRDGFKESIADAVARLQEEYGPSLVQRAEVHRDAAPLPDHRILWKPA
Ga0209524_10270273	3300027521	Forest Soil	RLEPAYIRQPGLLIRRDGFKESIADAIARLQEEYGPSLVQRAEVCSDAAPLPDHRILWKP
Ga0208990_12022571	3300027663	Forest Soil	LRASITAPLERITLRAGRLEPAYVRQPGLLVRRDGFKESIADAVARLQEEYGPSLVQRAEVHRDAAPLPDHRILWKPA
Ga0209011_10345361	3300027678	Forest Soil	AYVRQPGLLVRSDSFKESIADAVARLQEEYGSTLVQRAEVRSDAAPLPDHRILWKPA
Ga0208991_12187413	3300027681	Forest Soil	LIRRDSFKESIADAVARLQEEYGPSLVQRAEVRSDAAPLPDHRILWKPA
Ga0209689_13286491	3300027748	Soil	PLERITLRAGRLEAAYIRQPGLLMRRDGFKESIADAIARLQEEYGSSLVQRAEVRRDAAPLPDHRILWKPA
Ga0209283_101413123	3300027875	Vadose Zone Soil	FKESIADAVARLQEEYGASLVQRAEVRSDAAPLPDHRILWKPA
Ga0209590_100022088	3300027882	Vadose Zone Soil	VARLQEEYGPSLVQRAEVRSDAVPLPDHRILWKPA
Ga0209488_103222373	3300027903	Vadose Zone Soil	ITLRAGRLEAAYVRQPGLLIRRDSFKESIADAVARLQEEYGPSLVQRAEVRSDAAPLPDHRILWKPA
Ga0307479_110869701	3300031962	Hardwood Forest Soil	AYVRQPGLLIRRDGFQESIADAVARLQEEYGSLLVLRAEVRSDAAPLPDHRILWKPA
Ga0307471_1024526041	3300032180	Hardwood Forest Soil	LIRRDGFQESIADAVARLQEEYGSSVVQRAEVRSDAAPLPDHRILWKPA
Ga0307472_1001412451	3300032205	Hardwood Forest Soil	RDGFQESIADAVARLQEEYGSSVVQRAEVRADAAPLPDHRILWKPA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102147

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences