Metagenome / Metatranscriptome Family F102275

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102275
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	96 residues
Representative Sequence	MVYFLALLPATALTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESETATPPTRQ
Number of Associated Samples	78
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.00 %
% of genes near scaffold ends (potentially truncated)	43.56 %
% of genes from short scaffolds (< 2000 bps)	65.35 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.208 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.515 % of family members)
Environment Ontology (ENVO)	Unclassified (50.495 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.475 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.51% β-sheet: 5.61% Coil/Unstructured: 58.88%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00563	EAL	26.73
PF13649	Methyltransf_25	16.83
PF08592	Anthrone_oxy	15.84
PF13847	Methyltransf_31	8.91
PF00990	GGDEF	6.93
PF01729	QRPTase_C	5.94
PF06181	Urate_ox_N	1.98
PF13426	PAS_9	1.98
PF06945	DUF1289	0.99
PF00067	p450	0.99
PF00462	Glutaredoxin	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	26.73
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	26.73
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	26.73
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	26.73
COG0157	Nicotinate-nucleotide pyrophosphorylase	Coenzyme transport and metabolism [H]	5.94
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	5.94
COG3748	Uncharacterized membrane protein	Function unknown [S]	1.98
COG2124	Cytochrome P450	Defense mechanisms [V]	0.99
COG3313	Predicted Fe-S protein YdhL, DUF1289 family	General function prediction only [R]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.21 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.21 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.21 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	69.31 %
Unclassified	root	N/A	20.79 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.79 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8.91 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.98 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.79 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	4.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.98 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.99 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.99 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.98 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.99 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.99 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.98 %
Methylococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus	0.99 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.99 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.98 %
unclassified Methylococcus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus	0.99 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.99 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	20.79 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	4.95 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.98 %
Methylococcus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus → Methylococcus sp.	0.99 %
Sinobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	0.99 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005363\|Ga0008090_10091906	All Organisms → cellular organisms → Bacteria → Proteobacteria	1053	Open in IMG/M
3300005363\|Ga0008090_10162648	All Organisms → cellular organisms → Bacteria → Proteobacteria	871	Open in IMG/M
3300005363\|Ga0008090_10221944	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300005467\|Ga0070706_100279177	All Organisms → cellular organisms → Bacteria → Proteobacteria	1559	Open in IMG/M
3300005764\|Ga0066903_101144403	All Organisms → cellular organisms → Bacteria → Proteobacteria	1439	Open in IMG/M
3300005764\|Ga0066903_104582368	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300010046\|Ga0126384_10036513	All Organisms → cellular organisms → Bacteria → Proteobacteria	3304	Open in IMG/M
3300010046\|Ga0126384_11156548	All Organisms → cellular organisms → Bacteria → Proteobacteria	712	Open in IMG/M
3300010048\|Ga0126373_11510667	All Organisms → cellular organisms → Bacteria → Proteobacteria	737	Open in IMG/M
3300010361\|Ga0126378_12111475	All Organisms → cellular organisms → Bacteria → Proteobacteria	642	Open in IMG/M
3300010376\|Ga0126381_100160534	All Organisms → cellular organisms → Bacteria → Proteobacteria	2963	Open in IMG/M
3300010376\|Ga0126381_101020264	All Organisms → cellular organisms → Bacteria → Proteobacteria	1194	Open in IMG/M
3300010376\|Ga0126381_102406909	All Organisms → cellular organisms → Bacteria → Proteobacteria	755	Open in IMG/M
3300010376\|Ga0126381_102860312	All Organisms → cellular organisms → Bacteria → Proteobacteria	688	Open in IMG/M
3300010398\|Ga0126383_10804211	All Organisms → cellular organisms → Bacteria → Proteobacteria	1023	Open in IMG/M
3300010398\|Ga0126383_11062943	All Organisms → cellular organisms → Bacteria → Proteobacteria	899	Open in IMG/M
3300016294\|Ga0182041_10665019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	921	Open in IMG/M
3300016357\|Ga0182032_11852205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	528	Open in IMG/M
3300016371\|Ga0182034_11934836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	521	Open in IMG/M
3300016387\|Ga0182040_10041011	All Organisms → cellular organisms → Bacteria	2807	Open in IMG/M
3300017959\|Ga0187779_10206569	All Organisms → cellular organisms → Bacteria → Proteobacteria	1230	Open in IMG/M
3300018060\|Ga0187765_10695074	All Organisms → cellular organisms → Bacteria → Proteobacteria	667	Open in IMG/M
3300020580\|Ga0210403_10137958	All Organisms → cellular organisms → Bacteria → Proteobacteria	1991	Open in IMG/M
3300020581\|Ga0210399_10033656	All Organisms → cellular organisms → Bacteria → Proteobacteria	4099	Open in IMG/M
3300020583\|Ga0210401_10188532	All Organisms → cellular organisms → Bacteria → Proteobacteria	1919	Open in IMG/M
3300021168\|Ga0210406_10423507	All Organisms → cellular organisms → Bacteria → Proteobacteria	1063	Open in IMG/M
3300021178\|Ga0210408_10469192	All Organisms → cellular organisms → Bacteria → Proteobacteria	1001	Open in IMG/M
3300021420\|Ga0210394_11312162	All Organisms → cellular organisms → Bacteria → Proteobacteria	618	Open in IMG/M
3300021559\|Ga0210409_10016956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7162	Open in IMG/M
3300021560\|Ga0126371_10193184	All Organisms → cellular organisms → Bacteria	2127	Open in IMG/M
3300021560\|Ga0126371_11485822	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
3300021560\|Ga0126371_11709708	All Organisms → cellular organisms → Bacteria → Proteobacteria	753	Open in IMG/M
3300031057\|Ga0170834_102547491	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300031128\|Ga0170823_11409074	All Organisms → cellular organisms → Bacteria → Proteobacteria	1739	Open in IMG/M
3300031231\|Ga0170824_104353447	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300031474\|Ga0170818_101056394	All Organisms → cellular organisms → Bacteria → Proteobacteria	1818	Open in IMG/M
3300031543\|Ga0318516_10005746	All Organisms → cellular organisms → Bacteria → Proteobacteria	5672	Open in IMG/M
3300031543\|Ga0318516_10045105	All Organisms → cellular organisms → Bacteria	2384	Open in IMG/M
3300031544\|Ga0318534_10111308	All Organisms → cellular organisms → Bacteria	1571	Open in IMG/M
3300031544\|Ga0318534_10202938	All Organisms → cellular organisms → Bacteria → Proteobacteria	1144	Open in IMG/M
3300031544\|Ga0318534_10542513	All Organisms → cellular organisms → Bacteria → Proteobacteria	663	Open in IMG/M
3300031546\|Ga0318538_10413378	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300031561\|Ga0318528_10621626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	579	Open in IMG/M
3300031572\|Ga0318515_10782830	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
3300031680\|Ga0318574_10031794	All Organisms → cellular organisms → Bacteria → Proteobacteria	2675	Open in IMG/M
3300031680\|Ga0318574_10309808	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300031682\|Ga0318560_10203843	All Organisms → cellular organisms → Bacteria → Proteobacteria	1057	Open in IMG/M
3300031713\|Ga0318496_10460080	All Organisms → cellular organisms → Bacteria → Proteobacteria	703	Open in IMG/M
3300031715\|Ga0307476_10093658	All Organisms → cellular organisms → Bacteria → Proteobacteria	2113	Open in IMG/M
3300031718\|Ga0307474_10016961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae	5281	Open in IMG/M
3300031720\|Ga0307469_11676734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylococcus → unclassified Methylococcus → Methylococcus sp.	612	Open in IMG/M
3300031723\|Ga0318493_10792200	All Organisms → cellular organisms → Bacteria → Proteobacteria	534	Open in IMG/M
3300031724\|Ga0318500_10593049	All Organisms → cellular organisms → Bacteria → Proteobacteria	561	Open in IMG/M
3300031747\|Ga0318502_10082580	All Organisms → cellular organisms → Bacteria	1753	Open in IMG/M
3300031747\|Ga0318502_10149771	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1330	Open in IMG/M
3300031748\|Ga0318492_10184208	All Organisms → cellular organisms → Bacteria → Proteobacteria	1063	Open in IMG/M
3300031753\|Ga0307477_10803512	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300031754\|Ga0307475_10344565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1197	Open in IMG/M
3300031754\|Ga0307475_10814046	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300031770\|Ga0318521_11033948	All Organisms → cellular organisms → Bacteria → Proteobacteria	504	Open in IMG/M
3300031777\|Ga0318543_10247725	All Organisms → cellular organisms → Bacteria → Proteobacteria	794	Open in IMG/M
3300031778\|Ga0318498_10106836	All Organisms → cellular organisms → Bacteria → Proteobacteria	1270	Open in IMG/M
3300031781\|Ga0318547_10861991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	565	Open in IMG/M
3300031782\|Ga0318552_10020579	All Organisms → cellular organisms → Bacteria → Proteobacteria	2918	Open in IMG/M
3300031782\|Ga0318552_10400309	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300031796\|Ga0318576_10403139	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M
3300031798\|Ga0318523_10033411	All Organisms → cellular organisms → Bacteria	2346	Open in IMG/M
3300031890\|Ga0306925_11064360	All Organisms → cellular organisms → Bacteria → Proteobacteria	820	Open in IMG/M
3300031893\|Ga0318536_10483037	All Organisms → cellular organisms → Bacteria → Proteobacteria	623	Open in IMG/M
3300031897\|Ga0318520_10242794	All Organisms → cellular organisms → Bacteria → Proteobacteria	1073	Open in IMG/M
3300031912\|Ga0306921_11632271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	700	Open in IMG/M
3300031946\|Ga0310910_10192707	All Organisms → cellular organisms → Bacteria → Proteobacteria	1579	Open in IMG/M
3300031947\|Ga0310909_10222698	All Organisms → cellular organisms → Bacteria → Proteobacteria	1572	Open in IMG/M
3300032065\|Ga0318513_10239036	All Organisms → cellular organisms → Bacteria → Proteobacteria	879	Open in IMG/M
3300032068\|Ga0318553_10537102	All Organisms → cellular organisms → Bacteria → Proteobacteria	613	Open in IMG/M
3300032089\|Ga0318525_10454327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	656	Open in IMG/M
3300032090\|Ga0318518_10092278	All Organisms → cellular organisms → Bacteria → Proteobacteria	1503	Open in IMG/M
3300032180\|Ga0307471_100706273	All Organisms → cellular organisms → Bacteria → Proteobacteria	1173	Open in IMG/M
3300032205\|Ga0307472_100023357	All Organisms → cellular organisms → Bacteria → Proteobacteria	3440	Open in IMG/M
3300033289\|Ga0310914_11246509	All Organisms → cellular organisms → Bacteria → Proteobacteria	646	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	91.09%
Loam	Environmental → Terrestrial → Soil → Loam	6.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.98%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	70.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.94%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	48.51%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.92%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.96%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.98%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_102597132	3300004633	Tropical Forest Soil	MVYFLALLPATALTIAGYFVLYLSARSEGSLRSFGRYLGYWAFTLAGLVILGAIFAAAHGGHRGYCPWHHGPDAGYEGPPPPTRQ*
Ga0066388_1020545682	3300005332	Tropical Forest Soil	MVYFLALLPATALTIAGYFVLYLSARSEGSLRSFGRYLGYWAFTLAGLVILGAIFAAAHGGHRGYCPWHHEPDGRYEGPPPPTPQ*
Ga0008090_100919062	3300005363	Tropical Rainforest Soil	MVYFLALLPATAITIAGYFALYLSARSEGSMRTFGRYLGYWAFTLAGLVILGAIFAAAHHGHRGYCPWHPDRDARYEAPRGSSEPAPPAAPGAESETATPPTRQ*
Ga0008090_101626482	3300005363	Tropical Rainforest Soil	MVYFLALLPATAITIAGYFALYLSARSEGSMRTFGRYLGYWAFTLAGLVILGAIFAAAHHRHGHCPWPHDGDERYEAPRGSSAPAPPATPGSESEPATPPARQ*
Ga0008090_102219442	3300005363	Tropical Rainforest Soil	MLYLLALLPATAITIAGYFALYLSARSEGSMRTFGRYLGYWAFTLAGLVILGAIFAAAHHRHGHCPWHPDRDERYEAPRGSSAPAPPATPGSESEPATPPTRQ*
Ga0070706_1002791771	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPYLLALLPATGLTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILAAIFAAAHGGHHGHGMYCPWHDDRDARAEAPRAPSAPEPPATSGAESEIPTPPARQ*
Ga0066905_1008037222	3300005713	Tropical Forest Soil	MVYFLALLPATALTIAGYFVLYLSARSEGSLRSFGRYLGYWAFTLAGLVILGAIFAAAHGGHRGYCPWHQEQDGRYEGPPPPTRQ*
Ga0066903_1011444032	3300005764	Tropical Forest Soil	MPYLLALFPATALTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAIFAAAHGGHHGHGMYCPWHDERGERSEAPRGPTAAEPPATPGAGSETATPPTRQ*
Ga0066903_1045823681	3300005764	Tropical Forest Soil	YLSARSEGSLRTFGKYLGYWAFTLAGLVILGAIFAAAHGGHHGHGMYCPWHDERGERSEAPRAPTAAEPPATPGAESETATPPTRQ*
Ga0066903_1058599742	3300005764	Tropical Forest Soil	RSEGSLRSFGKYLGYWAFTLAGLVILGAIFAAAHGGHHGHGMYCPWHDDRGERSEAPRGPAAAEPPATPGAESETATPPTRQ*
Ga0126384_100365132	3300010046	Tropical Forest Soil	MVYFLALLPATALTIAGYFVLYLSARSEGSLRSFGRYLGYWAFTLAGLVILGAIFAAAHGGHRGYCPWHHEADARRSSAPAPPLTDPASESETATPPTRQ*
Ga0126384_111565482	3300010046	Tropical Forest Soil	MVYLLALLPATALTIAGYFVLYLSARSEGSLRSFGRYLGYWAFTLAGLVILGAIFAAAHGGHRGYCPWHHDRDALYEGPRGSSAPAPPPAGPSSESETATPPTRQ*
Ga0126373_112039781	3300010048	Tropical Forest Soil	YFVLYLSARSEGSLRSFGRYLGYWAFTLAGLVILGAIFAAAHGGHRGYCPWHHGPDAGYEGPPPPTRQ*
Ga0126373_115106671	3300010048	Tropical Forest Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWVFTLAGLVILGAILAAAHGGHHGHGMYCPWHDDRGARSEAPSGPAAAERPATPGAESETATPPTRQ*
Ga0126370_107602972	3300010358	Tropical Forest Soil	MVYFLALLPATALTIAGYFVLYLSARSEGSLRSFGRYLGYWAFTLAGLVILGAIFAAAHGGHRGYCPWHHDRDAGYEGPPPPTRQ*
Ga0126378_109161092	3300010361	Tropical Forest Soil	MVYFLALLPATALTIAGYFVLYLSARAEGSLRSFGRYLGYWAFTLAGLVILGAIFAAAHGGHRGYCPWHHGPDAGYEGPPPPARQ*
Ga0126378_121114751	3300010361	Tropical Forest Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGDHRHGSFCPWHEERGERSEAPRGPAAAEPPATSGAESETATPPTRQ*
Ga0126381_1001605342	3300010376	Tropical Forest Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAIIAAAHGGHHGHGMYCPWHDERGERSEAPRGPAAGEPPVTPGAESETQTPPTRQ*
Ga0126381_1010202642	3300010376	Tropical Forest Soil	MPYLLALLPATLLTVAGYFVLYLSARSEGSLRSFGKYLGYWAFTLAGLVILGAIFAAAHGGHHGHGMYCPWHDERGASSEAPRGPAAAEPPATPGAESETATPPTRQ*
Ga0126381_1024069092	3300010376	Tropical Forest Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWVFTLAGLVILGAILAAAHGGHHGHGMYCPWHDDRGARSEAPSGPAAAEPPATPGAESETATPPTRQ*
Ga0126381_1028603121	3300010376	Tropical Forest Soil	MVYFLALLPATAITIAGYFALYLSARSEGSMRTFGRYLGYWAFTLAGLVILGAIFAAAHHGHRGYCPWHPDRDARYEAPRGSSAPAPPAAPGAESDAATPPTRQ*
Ga0126383_108042111	3300010398	Tropical Forest Soil	DPTIDRRPDRCLMVYFLALLPATALTIAGYFVLYLSARSEGSLRSFGRYLGYWAFTLAGLVILGAIFAAAHGGHRGYCPWHHEADARRSSAPAPPLTDPASESETATPPTRQ*
Ga0126383_110629431	3300010398	Tropical Forest Soil	RCLMPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHGHGMYCPWHDDRGARSEAPSGPAAAEPPATPGAESETATPPTRQ*
Ga0126369_101927443	3300012971	Tropical Forest Soil	MVYFLALLPATALTIAGYFVLYLSARAEGSLRSFGRYLGYWAFTLAGLVILGAIFAAAHGGHRGYCPWHHGPDAGYEGPPPPTRQ*
Ga0182041_106650192	3300016294	Soil	MPYLLALIPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAIFAAAHGGHHGSCPWHHDRDAHYEGPPGSSEPAPPPTRQ
Ga0182033_108398961	3300016319	Soil	LGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0182032_118522051	3300016357	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERWEAPRGPAAAEP
Ga0182034_119348362	3300016371	Soil	PATALTVAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVILGAIFAAAHGGHHGSCPWHHDRDAHYEGPPGSSEPAPPPTRQ
Ga0182040_100410111	3300016387	Soil	MPYLLALIPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0182037_105086391	3300016404	Soil	YLGYWAFTLAGLVILGAILAAAHGDHRHGSFCPWHEERGERSEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0187779_102065692	3300017959	Tropical Peatland	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHGHGMYCPWHDDRGAHSEAPRGPAAPEPPATPGAESETATPPTRQ
Ga0187765_106950741	3300018060	Tropical Peatland	MVYFLALLPATALTIAGYFVLYLSARSEGSLRAFGRYLGYWAFTLAGLVVLGAIFAAAHHGHRGYCPWHPDRDARFEGPRGSSAPAPPPPAGAESETATPPTRQ
Ga0210407_102174221	3300020579	Soil	LRTFGRYLGYWAFTLAGLVILAAIFAAAHGGHRGHGMYCPWHETPDARAEAPRAPSAPEPPATSGAESEIPTPPARQ
Ga0210403_101379582	3300020580	Soil	MVYFLALLPATVLTIAGYFVLYLSARSQGSLRTFGQYLGYWAFTLAGLVILGAIFAAAHGGHRGHGMYCPWHETPDARAEAPRAPSAPEPPATSGAESEIPTPPARQ
Ga0210399_100336563	3300020581	Soil	MPYLLALLPATGLTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILAAIFAAAHGGHRGHGMYCPWHETPDARAEAPRAPSAPEPPATSGAESEIPTPPARQ
Ga0210401_101885322	3300020583	Soil	MPYLLALLPATGLTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVILAAIFAAAHGGHRGHGMYCPWHETPDARAEAPRAPSAPEPPATSGAESEIPTPPARQ
Ga0210406_104235072	3300021168	Soil	MPYLLALLPATGLSIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILAAIFAAAHGGHRGHGMYCPWHETPDARAEAPRAPSAPEPPATSGAESEIPTPPARQ
Ga0210408_104691921	3300021178	Soil	ATGLSIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILAAIFAAARGGHRGHGMYCPWHETPDARAEAPRAPSAPEPPATSGAESEIPTPPARQ
Ga0210394_113121622	3300021420	Soil	RPDRCRMPYLLALLPATGLTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVILAAIFAAAHGGHRGHGMYCPWHETPDARAEAPRAPSAPEPPATSGAESEIPTPPARQ
Ga0210409_100169563	3300021559	Soil	MPYLLALLPATGLTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILAAIFAAARGGHRGHGMYCPWHETPDARAEAPRAPSAPEPPATSGAESEIPTPPARQ
Ga0126371_101931842	3300021560	Tropical Forest Soil	MPYLLALLPATLLTVAGYFVLYLSARSEGSLRSFGKYLGYWAFTLAGLVILGAIFAAAHGGHHGHGMYCPWHDERGARSEVPRGPAAAEPPATPGAESETATPPTRQ
Ga0126371_103514212	3300021560	Tropical Forest Soil	MVYFLALLPATALTIAGYFVLYLSARSEGSLRSFGRYLGYWAFTLAGLVILGAIFAAAHGGHRGYCPWHHGPDAGYEGPPPPARQ
Ga0126371_114858222	3300021560	Tropical Forest Soil	MPYLLALFPATALTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAIFAAAHGGHHGHGMYCPWHDERGERSEAPRGPTAAEPPATPGAGSETATPPTRQ
Ga0126371_117097082	3300021560	Tropical Forest Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAIIAAAHGGHHGHGMYCPWHDERGERSEAPRGPAAAEPPATPGAES
Ga0170834_1025474912	3300031057	Forest Soil	MPYLLALLPATGLTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILAAIFAAAHGGHRGHGMYCPWHDDRDARAEAPRAPSAPEPPATSGAESEIP
Ga0170823_114090741	3300031128	Forest Soil	MPYLLALLPATGLTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTVAGRVILAAIFAAAHGGHRGHGMYCPWHDDRDARAEAPRAPSAPEPPATSGAESEIP
Ga0170824_1043534472	3300031231	Forest Soil	MPYLLALLPATGLTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILAAIFAAAHGGHRGHGMYCPWHDDRDARAEAPRAPSAPEPPATSGAESEI
Ga0170818_1010563942	3300031474	Forest Soil	MPYLLALLPATGITIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILAAIFAAAHGGHRGHGMYCPWHDDRDARAEAPRAPSAPEPPATSGAESEI
Ga0318516_100057469	3300031543	Soil	MVYFLALLPATALTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVILGAIFAAAHGGHHGSCPWHHDRDAHYEGPPGSSEPAPPPTRQ
Ga0318516_100451053	3300031543	Soil	MLYFLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318534_101113083	3300031544	Soil	RCLMLYFLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318534_102029382	3300031544	Soil	MVYFLALLPATGLTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVVLGAIFAAAHHGHRGYCPWHDDRDARYEAPRGSSAPAPPAGSGAESETATPPTRQ
Ga0318534_105425131	3300031544	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318538_104133781	3300031546	Soil	LPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318528_106216261	3300031561	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEA
Ga0318515_107828301	3300031572	Soil	DLPIDRRPDGCLMVYFLALLPATALTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVILGAIFAAAHGGHHGSCPWHHDRDAHYEGPPGSSEPAPPPTRQ
Ga0318555_104943641	3300031640	Soil	MLYLLALLPATAITIAGYFALYLSARSEGSMRTFGRYLGYWAFTLAGLVILGAIFAAAHGGHRGYCPWHHDGDAGYETPRGS
Ga0318574_100317944	3300031680	Soil	MVYFLALLPATGLTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVVLGAIFAAAHHGHRGYCPWHDDRDARYEAPRGSSAPAPPSGSGAESETATPPTRQ
Ga0318574_103098081	3300031680	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEAPRGPAAA
Ga0318560_102038431	3300031682	Soil	MLYFLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPP
Ga0318496_104600801	3300031713	Soil	TVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0307476_100936583	3300031715	Hardwood Forest Soil	MVYFLALLPATALTIAGYFVLYLSARSQGSLQTFGKYLGYWAFTFAGLVILGAIFAAAHGGHRGLLAAHGMHCPWHDEPDTRSELPREPAAAAPAAAPGAESETATPPTRQ
Ga0307474_100169611	3300031718	Hardwood Forest Soil	MVYFLALLPATALTIAGYFVLYLSTRSEGSLRTFGRYLGYWAFTLAGLLILGALFAAAHGGHRGYCPWHHDRDAGYEAPRGSSAPAPPPAPGAESETATPPTR
Ga0307469_116767341	3300031720	Hardwood Forest Soil	LLPATGLTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILAAIFAAAHGGHHGHGMYCPWHDDRDARAEAPRAPSAPEPPATSGAESEIPTPPARQ
Ga0318493_107922001	3300031723	Soil	MVYFLALLPATGLTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVVLGAIFAAAHHGHRGYCPWHDDRDARYEAPRGSSAPAPPAGSGAESE
Ga0318500_105930491	3300031724	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWVFTLAGLVILGAILAAAHGGHHGHGMYCPWHDDRGARSEAPSGPAAAE
Ga0306918_102396731	3300031744	Soil	YWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318502_100825802	3300031747	Soil	MVYFLALLPATGLTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVVLGAIFAAAHHGHRGYCPWHDDRDARYEAPRGSSAP
Ga0318502_101497712	3300031747	Soil	MLYFLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRG
Ga0318492_101842081	3300031748	Soil	DRRPDRCLMLYFLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0307477_108035121	3300031753	Hardwood Forest Soil	ALLPATALTIAGYFVLYLSARSQGSLQTFGKYLGYWAFTFAGLVILGAIFAAAHGGHRGLLAAHGMHCPWHDEPDTRSELPREPAAAAPAAAPGAESETATPPTRQ
Ga0307475_103445652	3300031754	Hardwood Forest Soil	MVYFLALLPATALTIAGYFVLYLSTRSEGSLRTFGRYLGYWAFTLAGLLILGALFAAAHGGHRGYCPWHHDRDAGYEAPRGSSAPAPPPAPGAESEAATPPTRQ
Ga0307475_108140461	3300031754	Hardwood Forest Soil	YLSARSEGSLRTFGKYLGYWAFTLAGLVILAAIFAAAHGGHRGHGMYCPWQETPDARAEAPRAPSGPGPPATSGAESEIPTPPARQ
Ga0318526_104459621	3300031769	Soil	SLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318521_101654271	3300031770	Soil	FGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318521_110339481	3300031770	Soil	MLYFLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESE
Ga0318543_102477252	3300031777	Soil	MVYFLALLPATGLTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVVLGAIFAAAHHGHRGYCPWHDDRDARYEAPRGSSAPAPPAGSGA
Ga0318498_101068362	3300031778	Soil	MVYFLALLPATALTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318547_101747641	3300031781	Soil	YLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318547_108619911	3300031781	Soil	MPYLLALIPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAIFAAAHGGHHGHGMYCPWHDERGERSEAPRGPTAAEPPATPGAESETATPPTRQ
Ga0318552_100205793	3300031782	Soil	MVYFLALLPATGLTIAGYFVLYLSARSEGSLLTFGRYLGYWAFTLAGLVVLGAIFAAAHHGHRGYCPWHDDRDARYEAPRGSSAPAPPAGSGAESETATPPTRQ
Ga0318552_104003091	3300031782	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEAPRGPAAAEPPATPGAESE
Ga0318576_104031391	3300031796	Soil	FVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318523_100334114	3300031798	Soil	IDRRPDGCLMVYFLALLPATALTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVILGAIFAAAHGGHHGSCPWHHDRDAHYEGPPGSSEPAPPPTRQ
Ga0310917_102488191	3300031833	Soil	LGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0306925_110643601	3300031890	Soil	YFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318536_104830371	3300031893	Soil	TVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318520_102427941	3300031897	Soil	PDGCLMVYFLALLPATALTIAGYFVLYLSARSEGSLRTFGRYLGYWAFTLAGLVILGAIFAAAHGGHHGSCPWHHDRDAHYEGPPGSSEPAPPPTRQ
Ga0306921_116322712	3300031912	Soil	MPYLLALIPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAIFAAAHGGHHGHGMYCPWHDERGERSEAPRGPTAAEPPATPGAESETATPPTR
Ga0310910_101927072	3300031946	Soil	MLYFLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0310909_102226982	3300031947	Soil	MLYFLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPG
Ga0318531_100785682	3300031981	Soil	MLYLLALLPATAITIAGYFALYLSARSEGSMRTFGRYLGYWAFTLAGLVILGAIFAAAHHCHGHCPWHHDRDDRYEAPRG
Ga0306922_101273521	3300032001	Soil	RSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318558_100861063	3300032044	Soil	LGYWAFTLAGLVILGAIFAAAHGGHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318513_102390362	3300032065	Soil	ALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318553_105371022	3300032068	Soil	PYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEAPRGPAAAEPPATPGAESETATPPTRQ
Ga0318525_104543271	3300032089	Soil	MPYLLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGGHHHHGDFCPWHDERGERSEAPRGPA
Ga0318518_100922782	3300032090	Soil	MLYFLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERWEAPRGPAAAEPPA
Ga0307471_1007062732	3300032180	Hardwood Forest Soil	MPYLLALLPATGLTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILAAIFAAAHGGHRGHGMYCPWHDDRDARAEAPRAPSAPEPPATSGAESEIPTPPARQ
Ga0307472_1000233572	3300032205	Hardwood Forest Soil	MPYLLALLPATGLTIAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILAAIFAAAHGGHHGHGMYCPWHDDRDARAEAPRAPSAPEPPATSGAESEIPTPPARQ
Ga0310914_112465092	3300033289	Soil	MLYFLALLPATALTVAGYFVLYLSARSEGSLRTFGKYLGYWAFTLAGLVILGAILAAAHGRHHGHGMYCPWHDERGERSEAPRGPTAAEPPATPGAESETATPPTRQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102275

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences