Metagenome Family F102412

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102412
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	67 residues
Representative Sequence	MSITLPDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMI
Number of Associated Samples	72
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	67.33 %
% of genes near scaffold ends (potentially truncated)	95.05 %
% of genes from short scaffolds (< 2000 bps)	92.08 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (64.356 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.584 % of family members)
Environment Ontology (ENVO)	Unclassified (61.386 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.495 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 57.81% β-sheet: 0.00% Coil/Unstructured: 42.19%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13463	HTH_27	4.95
PF08388	GIIM	3.96
PF06568	DUF1127	2.97
PF07690	MFS_1	1.98
PF06627	DUF1153	1.98
PF13545	HTH_Crp_2	0.99
PF13671	AAA_33	0.99
PF12974	Phosphonate-bd	0.99
PF01557	FAA_hydrolase	0.99
PF01070	FMN_dh	0.99
PF01810	LysE	0.99
PF00903	Glyoxalase	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	2.97
COG0069	Glutamate synthase domain 2	Amino acid transport and metabolism [E]	0.99
COG1304	FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase	Energy production and conversion [C]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
All Organisms	root	All Organisms	35.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
cellular organisms	root	All Organisms → cellular organisms	35.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	25.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18.81 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.99 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6.93 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.95 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	1.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.93 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	4.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.98 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6.93 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	4.95 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.98 %
Cystobacterineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	4.95 %
Bradyrhizobium retamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae	3.96 %
Bradyrhizobium vignae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium vignae	1.98 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1.98 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.99 %
Archangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	0.99 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10573604	Not Available	658	Open in IMG/M
3300005171\|Ga0066677_10225949	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae → Archangiaceae	1056	Open in IMG/M
3300005332\|Ga0066388_102822370	Not Available	887	Open in IMG/M
3300005332\|Ga0066388_105557014	Not Available	638	Open in IMG/M
3300005434\|Ga0070709_10171888	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300005545\|Ga0070695_100372008	Not Available	1076	Open in IMG/M
3300005764\|Ga0066903_108863945	Not Available	510	Open in IMG/M
3300009143\|Ga0099792_10498053	Not Available	762	Open in IMG/M
3300009148\|Ga0105243_11600996	Not Available	678	Open in IMG/M
3300009792\|Ga0126374_11166772	Not Available	615	Open in IMG/M
3300010047\|Ga0126382_10819033	All Organisms → cellular organisms → Bacteria	796	Open in IMG/M
3300010048\|Ga0126373_10935251	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300010359\|Ga0126376_10696024	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300010360\|Ga0126372_12085577	Not Available	615	Open in IMG/M
3300010362\|Ga0126377_10705481	Not Available	1062	Open in IMG/M
3300010376\|Ga0126381_102601820	Not Available	724	Open in IMG/M
3300010376\|Ga0126381_102951521	Not Available	676	Open in IMG/M
3300012362\|Ga0137361_10656279	Not Available	960	Open in IMG/M
3300012362\|Ga0137361_11677113	Not Available	555	Open in IMG/M
3300012469\|Ga0150984_100349809	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300012924\|Ga0137413_10173316	Not Available	1429	Open in IMG/M
3300012971\|Ga0126369_11450923	Not Available	776	Open in IMG/M
3300015371\|Ga0132258_13100451	Not Available	1149	Open in IMG/M
3300015372\|Ga0132256_101236976	Not Available	860	Open in IMG/M
3300016270\|Ga0182036_10620533	Not Available	869	Open in IMG/M
3300016319\|Ga0182033_11998012	Not Available	528	Open in IMG/M
3300016341\|Ga0182035_11056267	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300016357\|Ga0182032_10546697	Not Available	958	Open in IMG/M
3300016371\|Ga0182034_11599771	Not Available	572	Open in IMG/M
3300016387\|Ga0182040_10314817	Not Available	1202	Open in IMG/M
3300016387\|Ga0182040_11033507	Not Available	686	Open in IMG/M
3300016387\|Ga0182040_11280493	Not Available	618	Open in IMG/M
3300016422\|Ga0182039_11518666	Not Available	610	Open in IMG/M
3300016445\|Ga0182038_10100827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2097	Open in IMG/M
3300016445\|Ga0182038_11249302	Not Available	663	Open in IMG/M
3300020579\|Ga0210407_11251090	Not Available	556	Open in IMG/M
3300020582\|Ga0210395_11106826	Not Available	585	Open in IMG/M
3300021403\|Ga0210397_11513258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	521	Open in IMG/M
3300021479\|Ga0210410_10642737	Not Available	940	Open in IMG/M
3300021479\|Ga0210410_11821541	Not Available	503	Open in IMG/M
3300021560\|Ga0126371_10933518	Not Available	1011	Open in IMG/M
3300021560\|Ga0126371_11654045	Not Available	765	Open in IMG/M
3300021560\|Ga0126371_11705737	Not Available	754	Open in IMG/M
3300021560\|Ga0126371_13682120	Not Available	517	Open in IMG/M
3300021560\|Ga0126371_13753435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	512	Open in IMG/M
3300026359\|Ga0257163_1074601	Not Available	548	Open in IMG/M
3300027512\|Ga0209179_1101356	Not Available	641	Open in IMG/M
3300031231\|Ga0170824_101821308	All Organisms → cellular organisms → Bacteria → Proteobacteria	884	Open in IMG/M
3300031231\|Ga0170824_110571143	Not Available	1100	Open in IMG/M
3300031474\|Ga0170818_106146898	All Organisms → cellular organisms → Bacteria → Proteobacteria	901	Open in IMG/M
3300031545\|Ga0318541_10024062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2950	Open in IMG/M
3300031572\|Ga0318515_10338419	Not Available	807	Open in IMG/M
3300031573\|Ga0310915_11041320	Not Available	570	Open in IMG/M
3300031573\|Ga0310915_11253915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	511	Open in IMG/M
3300031668\|Ga0318542_10048661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae	1916	Open in IMG/M
3300031679\|Ga0318561_10357398	Not Available	801	Open in IMG/M
3300031679\|Ga0318561_10695563	Not Available	559	Open in IMG/M
3300031680\|Ga0318574_10589396	Not Available	652	Open in IMG/M
3300031719\|Ga0306917_10093211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2144	Open in IMG/M
3300031719\|Ga0306917_10222148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae	1438	Open in IMG/M
3300031719\|Ga0306917_10488353	Not Available	966	Open in IMG/M
3300031719\|Ga0306917_10674878	Not Available	812	Open in IMG/M
3300031763\|Ga0318537_10049171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1528	Open in IMG/M
3300031764\|Ga0318535_10180861	Not Available	943	Open in IMG/M
3300031770\|Ga0318521_10083902	Not Available	1724	Open in IMG/M
3300031771\|Ga0318546_10142220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1611	Open in IMG/M
3300031771\|Ga0318546_11224069	Not Available	527	Open in IMG/M
3300031777\|Ga0318543_10572711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	506	Open in IMG/M
3300031781\|Ga0318547_10022501	All Organisms → cellular organisms → Bacteria → Proteobacteria	3130	Open in IMG/M
3300031781\|Ga0318547_10042385	All Organisms → cellular organisms → Bacteria → Proteobacteria	2410	Open in IMG/M
3300031782\|Ga0318552_10642720	Not Available	541	Open in IMG/M
3300031792\|Ga0318529_10552910	Not Available	534	Open in IMG/M
3300031793\|Ga0318548_10340193	Not Available	737	Open in IMG/M
3300031796\|Ga0318576_10558012	Not Available	540	Open in IMG/M
3300031860\|Ga0318495_10386524	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	618	Open in IMG/M
3300031890\|Ga0306925_10570079	Not Available	1198	Open in IMG/M
3300031893\|Ga0318536_10214654	Not Available	979	Open in IMG/M
3300031893\|Ga0318536_10676388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	514	Open in IMG/M
3300031897\|Ga0318520_10212951	All Organisms → cellular organisms → Bacteria	1143	Open in IMG/M
3300031910\|Ga0306923_10615478	Not Available	1217	Open in IMG/M
3300031910\|Ga0306923_12168253	Not Available	558	Open in IMG/M
3300031912\|Ga0306921_11908583	Not Available	635	Open in IMG/M
3300031942\|Ga0310916_10211070	All Organisms → cellular organisms → Bacteria	1627	Open in IMG/M
3300031942\|Ga0310916_10275942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae	1420	Open in IMG/M
3300031945\|Ga0310913_10187058	All Organisms → cellular organisms → Bacteria	1443	Open in IMG/M
3300031945\|Ga0310913_10934139	Not Available	609	Open in IMG/M
3300031945\|Ga0310913_11120868	Not Available	549	Open in IMG/M
3300031946\|Ga0310910_10125242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium vignae	1939	Open in IMG/M
3300031946\|Ga0310910_10165283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1701	Open in IMG/M
3300031954\|Ga0306926_10269232	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2110	Open in IMG/M
3300031954\|Ga0306926_10295505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium vignae	2005	Open in IMG/M
3300031954\|Ga0306926_11289146	Not Available	853	Open in IMG/M
3300031981\|Ga0318531_10089273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1349	Open in IMG/M
3300032001\|Ga0306922_11645768	Not Available	637	Open in IMG/M
3300032035\|Ga0310911_10017337	All Organisms → cellular organisms → Bacteria → Proteobacteria	3401	Open in IMG/M
3300032054\|Ga0318570_10579200	Not Available	512	Open in IMG/M
3300032068\|Ga0318553_10190510	Not Available	1068	Open in IMG/M
3300032076\|Ga0306924_10438277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1493	Open in IMG/M
3300032076\|Ga0306924_11120655	Not Available	856	Open in IMG/M
3300032076\|Ga0306924_11516981	Not Available	710	Open in IMG/M
3300033289\|Ga0310914_10304461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium retamae	1437	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.04%
Host-Associated	Host-Associated	3.96%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.04%
Plants	Host-Associated → Plants	3.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.11%
Loam	Environmental → Terrestrial → Soil → Loam	6.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	70.30%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.74%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.86%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.97%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300027512	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_105736041	3300004633	Tropical Forest Soil	MSVTSPCCLKLLRFVFASVAVIFLLGRAGVASEVTAPVEQLHSGLVAIMKAGKATPFRRRYEMIAPV
Ga0066677_102259491	3300005171	Soil	MSITLPDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMI
Ga0066388_1028223701	3300005332	Tropical Forest Soil	MSITLPDSRALLRLALASIALALGLGRAGASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMIAPVIGRTF
Ga0066388_1055570141	3300005332	Tropical Forest Soil	MPVSSHDRRSLLRLALGLAALWAACERADAAMEVTAPVEQLHAGLMAIMKAGKTASF
Ga0070709_101718881	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MLMSITLPDSRALLRLALTSIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPF
Ga0070695_1003720082	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MSITLPDSRALLRLALASIALALGLGQAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVI
Ga0066903_1088639452	3300005764	Tropical Forest Soil	MPVSSHDRRSLLRLALGSAALWAACERADAAMEVTAPVEQLHAGLMAIMKAGKTASFRQ
Ga0099792_104980531	3300009143	Vadose Zone Soil	MRLALGSAALAAGWNRAAIASEPTGPVEQLHAGLIAIMKAGKTASFRQR
Ga0105243_116009961	3300009148	Miscanthus Rhizosphere	MLMSITLPDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMIAPVIGR
Ga0126374_111667721	3300009792	Tropical Forest Soil	MQRGTLMSITLPDSRALLRLALASIALALGLGRAAIASEVMTPVEQLHAGLMAIMKAGKTAPFRQRYD
Ga0126382_108190331	3300010047	Tropical Forest Soil	MLMSITLPDRRALLRLALASIALALGLGRAGASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGRTFDLEVILRQVIGP
Ga0126373_109352512	3300010048	Tropical Forest Soil	MLMSITSPDSRAFLRLALASIALALGLGRAAIASEVTMPVEQLHAGLMAIMKAGKTVRFQQRYDMIAPV
Ga0126376_106960242	3300010359	Tropical Forest Soil	MLMSITLPDSRAILRLALASIALALGLGRAAVASEVTTPVEQLHTGLMAIMQAGKTAPFRQR*
Ga0126372_120855772	3300010360	Tropical Forest Soil	MLMSITLSDSRALLRLALASIALALGLGQAAVASEVTTPVEQLHAGLMAIMKAGKTA
Ga0126377_107054811	3300010362	Tropical Forest Soil	MLMSITLPDSRALLRLALASIALALGLGRAGASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMIAPVIGRTFDL
Ga0126381_1026018202	3300010376	Tropical Forest Soil	LRHFTLITLPDSRALLRLAFASIALAFGLSRAAVASEVTTPVEQLQAGLMAIMQAGKTAPFRQRYDMIAPVIGRTFDLEVILRQVIGPRLAA
Ga0126381_1029515211	3300010376	Tropical Forest Soil	MLMSITLPDSRALLRLALASIALAFGLSQAAVASEVTTPVEQLHAGLMAIMQAGKTTPFRQRYDMIAPVIGRTFDLEVILRQVIGPR
Ga0137361_106562792	3300012362	Vadose Zone Soil	MRLALGSAALAAGWNRAAIASEPTGPVEQLHAGLIAIMKAGKTASFRQRYDMIAPVVSR
Ga0137361_116771132	3300012362	Vadose Zone Soil	MSTTPPDRRTVLRLALGSATLALGWGRAAVASDVTGPVEQLHAGLIAIMKASKTASFRQRYDMIAPVVSRTFDLD
Ga0150984_1003498092	3300012469	Avena Fatua Rhizosphere	MSFTLPDRRTFLRVALGSAGLSCGWGRVALGSDVTGPVEQLHAGLIGIMKAGRAAPFRQRYEMIAPVVTR
Ga0137413_101733163	3300012924	Vadose Zone Soil	MRLALGSAALAAGWNRAAIASEPTGPVEQLHAGLIAIMKAGKSASFRQRYDMIAPVVSRI
Ga0126369_114509231	3300012971	Tropical Forest Soil	MSITLPDSRALLRLALASIALALGLGQAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMIAPVIGRT
Ga0132258_131004511	3300015371	Arabidopsis Rhizosphere	MLMSITLPDSRALLRLALASIALALGLGQAAVASEVTTPVEQLHAGLMAIMKAGKTAPF
Ga0132256_1012369761	3300015372	Arabidopsis Rhizosphere	MLMSIPFPNSRALLRLALASIALALGLGQAAVASEVTPPVEQLHAGLMAIMQSGMTAPFRQRYDM
Ga0182036_106205331	3300016270	Soil	MLMSITLSDSRALLRLALASIALALGLGQAAIASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGRTFDLEVI
Ga0182033_119980122	3300016319	Soil	MPVSSHDRRSFLRLALGSAALWAACERADAAMEVTAPVEQLHAGLMAIMKAGKTASFRQRYEMIAPIIGRTF
Ga0182035_110562671	3300016341	Soil	MSITLPDSRALLRLALASIALALGLGRAAIASEVTMPVEQLHAGLMAIMKAGKTVRFQ
Ga0182032_105466972	3300016357	Soil	MPVSSHDRRSFLRLALGSAALWAACERADAAMEVTAPVEQLHAGLMAIMKAGKTASFRQR
Ga0182034_115997712	3300016371	Soil	MLMSITLSDSRALLRLALASIALALGLGRAAGASEVTTPVEQLHAGLMAIMKAGKTAPF
Ga0182040_103148174	3300016387	Soil	MSITLPDSRALLRLALASIALAFGLSRAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYD
Ga0182040_110335071	3300016387	Soil	MLMSITLPDSRAVLRLALASIALALGLGQAAVASEVTTPVEQLHAGLMAIMKAGKTVRFQ
Ga0182040_112804931	3300016387	Soil	MSVTSLDRRRVLRLVLGSASLTVGWVRGVAAVEVTEPVEQLHAGLIAIMKAGKSVSFRQRYDM
Ga0182039_115186662	3300016422	Soil	MLTSITLPDSRALLRLALASIALAFGLSRAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGRTFDLEVILRQVIG
Ga0182038_101008271	3300016445	Soil	MPVSSHDRRSLLRLALGSAALWAACERADAAMEVTAPVEQLHAGLMAIMKAGKTASFRQR
Ga0182038_112493022	3300016445	Soil	MSITLPDSRALLRLALASIALAFGFRAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGRTFDLEVILRQVIG
Ga0210407_112510902	3300020579	Soil	MSVTSPDRRTLMRLALGSAALAVGWNRAAIASEPTGPVEQLHAGLIAIMKAGKTASFRQRYDMIAPVVSRI
Ga0210395_111068261	3300020582	Soil	MLMSITLPDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMIGL
Ga0210397_115132581	3300021403	Soil	MSVSPPDRRTILRLVLSTSALAVGWGRAAIASEITVPVEQLHAGLMAIMKAGKTASFRQRYETIAPVIGRTFDLE
Ga0210410_106427371	3300021479	Soil	MSVTSLDRRTLMRLALGSAAMAVGWNRAAIASEPTGPVEQLHAGLIAIMKAGKSAPFRQRYDMIAPV
Ga0210410_118215411	3300021479	Soil	MRLALGSAALAVGWNRAAVASEPTGPVEQLHAGLIAIMKAGKTASFRQRYDMIAPVVSRI
Ga0126371_109335182	3300021560	Tropical Forest Soil	MSITLPDSRALLRLALASIALAFGLSQAAVASEVTTPVEQLHAGLMAIMQAGKTTPFRQRYDMIAPVIGRTFDLEVI
Ga0126371_116540452	3300021560	Tropical Forest Soil	MSIILPDSRALLRLTLASIALAFGLSRAAVASEVTTPVEQLHAALMAIMQAGKTAPFRQRYDMIAPVIGRTFDLEVI
Ga0126371_117057371	3300021560	Tropical Forest Soil	MSITLPDSRALLRLALASIGLAFGLSRAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGRTFDLEVILRQVIGPRL
Ga0126371_136821201	3300021560	Tropical Forest Soil	MPVNSLDRRTALRFLLGSASLSFGWGRAAAASEVIGAVEELNTGLIAIMKAGKTVSFRQRYDMIGPI
Ga0126371_137534352	3300021560	Tropical Forest Soil	MPVSSHDRRSLLRLALGLAALWAACERADAAMEVTAPVEQLHAGLMAIMKAGKTASFR
Ga0257163_10746011	3300026359	Soil	MRLALGSAALAVGWNRAAVASEPTGPVEQLHAGLIAIMKAGKTASFRQRYDMIA
Ga0209179_11013561	3300027512	Vadose Zone Soil	MRLALGSAALAVGWNRAAVASEPTGPVEQLHAGLIAIMKAGKTASFRQRYDMIAPVVSR
Ga0170824_1018213082	3300031231	Forest Soil	MLMSITLPDRRTLLWLALASIALALGMGRAAVASEVTTPVEQLYAGLMAVMQAGKTAPFRRISPIVA
Ga0170824_1105711431	3300031231	Forest Soil	MSITVPDRRALLRLVLASIALSLGLGQAAVASEVTTPVEQLHAGLMAIMKAGKTAPFQQRYDM
Ga0170818_1061468982	3300031474	Forest Soil	MLMSITLPDRRTLLRLALASIALALGMGRAAVASEVTTPVEQLYAGLMAVMQAGKTAPFRRISPIVA
Ga0318541_100240621	3300031545	Soil	MSVTSLDRRRVLRLVLGSASLTVGWVRGVAAVEVTEPVEQLHAGLIAIMKAGKSVSFRQRYDMIAPIVI
Ga0318515_103384191	3300031572	Soil	MSITLPDSRALPRLALASIALAFGLSRAAVASEVTTPVEQLHTALMAIMQAGKAAPFPQRYDMIAP
Ga0310915_110413202	3300031573	Soil	MSITLPDSRALLRLALASIALAFGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTVRFQQ
Ga0310915_112539151	3300031573	Soil	MSITLPDSRALLRLALASIALAFGLSRAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGRTFDLEVILRQVIG
Ga0318542_100486612	3300031668	Soil	MSITLPDSRALLRLALASIALALGLGQAAVASEVTTPVEQLHAGLMAIMQAGKTA
Ga0318561_103573981	3300031679	Soil	MSVTSPSRRRLLWLALASATLSLGLGRAAAASEITAPVEQLHAGLIAIMKAGKTVPFRQRYDMIAPLIGRTFD
Ga0318561_106955631	3300031679	Soil	MSITLPDSRALLRLALASIALAFGLSRAAVASEVTTPVEQLHAGLMAIMQAGKTAP
Ga0318574_105893961	3300031680	Soil	MSITLPDSRALLRLALASIALAFGLSRAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGRTFDLEV
Ga0306917_100932116	3300031719	Soil	MPVSSHDRRSFLRLALGSAALWAACERADAAMEVTAPVEQLHAGLMAIMKAGKTASFRQRYEMIAPI
Ga0306917_102221482	3300031719	Soil	MLMSITLPDSRALLRLALASIALAFGLSQAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVISRTFDLE
Ga0306917_104883531	3300031719	Soil	MSITLPDSRALLRLALASIALAFGLSRAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGRT
Ga0306917_106748782	3300031719	Soil	MSITLPDSRALLRLALASIALAFGLSRAAIASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGRT
Ga0318537_100491711	3300031763	Soil	MSIALPDSRALLRLTLASIALALGLGRAAVGSEVMTPVEQLHAGLMAIMKAGKTAPFRQRYDMIAPVIGRTFD
Ga0318535_101808611	3300031764	Soil	MSIILPDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMIAPVIG
Ga0318521_100839023	3300031770	Soil	MPITSPDSRAFLRLSLASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMIAPVIG
Ga0318546_101422202	3300031771	Soil	MPVSSHDRRSLLRLALGSAALWAACERADAAMEVTAPVEQLHAGLMAIMKAGKTASFRQRYEMIAPIIGRTF
Ga0318546_112240691	3300031771	Soil	MSIILPDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMVAP
Ga0318543_105727111	3300031777	Soil	MSITLPDSRALLRLALASIALAFGLSRAAVASEVTTPVEQLHAGLMAMQAGKTAPFRQRYDMIAPVIGRTFDLEVILRQVIGPRLAALP
Ga0318547_100225019	3300031781	Soil	MPVSSHDRRSLLRLALGSAALWAACERADAAMEVTAPVEQLHAGLMAIMKAGKTASFRQRYE
Ga0318547_100423854	3300031781	Soil	MSVTSLDRRRVLRLVLGSASLTVGWVRGVAAVEVTEPVEQLHAGLIAIMKAGKSVSFRQR
Ga0318552_106427201	3300031782	Soil	MPITSPDSRAFLRLSLASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQR
Ga0318529_105529101	3300031792	Soil	MLMSIALPDSRALLRLTLASIALALGLGRAAVGSEVMTPVEQLHAGLMAIMKAGKTAPFRQRY
Ga0318548_103401931	3300031793	Soil	MLMSITLPDSRALLRLALASIALAFGLSRAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGR
Ga0318576_105580121	3300031796	Soil	MSVTSPSRRRLLWLALASATLSLGLGRAAAASEITAPVEQLHAGLIAIMKAGKTVPFRQRYDMIAPL
Ga0318495_103865241	3300031860	Soil	MSITLPDSRALFRLALASIALAFGLSRAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGRTFDLEVILRQVIGSRLA
Ga0306925_105700793	3300031890	Soil	MSITLPDSRALLRLALASIALAFGLSRAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGRTFDLEVILRQVIGPRL
Ga0318536_102146541	3300031893	Soil	MPITSPDSRAFLRLSLASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMIAPV
Ga0318536_106763881	3300031893	Soil	MLMSITLPDSRALLRLALASIALAFGLSRAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGRTFDLEVILQQV
Ga0318520_102129511	3300031897	Soil	MSITLPDSRALLRLALASIALAFGLSRAAIASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDM
Ga0306923_106154781	3300031910	Soil	MSITLPDSRAVLRLALASIALALGLGRAAAASEVTTPVEQLHAGLMAIMKAGKTA
Ga0306923_121682532	3300031910	Soil	MSITLPDSRALLRLALASIALALGLGQAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAP
Ga0306921_119085832	3300031912	Soil	MSITLPDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMIAPVIGRT
Ga0310916_102110701	3300031942	Soil	MSITLPDSRALLRLALASIALAFGLSRAAIASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIGRTFDLEV
Ga0310916_102759421	3300031942	Soil	MLMSITLPDSRALLRLALASIALAFGLSQAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMI
Ga0310913_101870583	3300031945	Soil	MSITLPDSRALLRLALASIALAFGLSRAAIASEVTTPVEQLHAGLMAIMQAGKTAPF
Ga0310913_109341391	3300031945	Soil	MLMSITLPDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTSPFQQRYD
Ga0310913_111208681	3300031945	Soil	MSITLPDSRALLRLALASIALAFGLSRAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQR
Ga0310910_101252424	3300031946	Soil	MSITLSDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMI
Ga0310910_101652831	3300031946	Soil	MPVSSHDRRSFLRLALGSAALWAACERADAAMEVTAPVEQLHAGLMAIMKAGKTASFRQRYEMIAP
Ga0306926_102692321	3300031954	Soil	VSIALPDSRALLRLTLASIALAFGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYD
Ga0306926_102955051	3300031954	Soil	MSITLSDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDMIAPV
Ga0306926_112891461	3300031954	Soil	MLMSITLSDSRALLRLALASIALTLGLGQAAVASEVTTPVEQLHAGLMAIMKAGKTAPFGSDTT
Ga0318531_100892732	3300031981	Soil	MLMSIILPDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYDM
Ga0306922_116457681	3300032001	Soil	MSITLPDSRAVLRLALASIALALGLGRAAAASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYD
Ga0310911_100173371	3300032035	Soil	MPVSSHDRRSFLRLALGSAALWAACERADAAMEVTAPVEQLHAGLMAIMKAGKTASFRQRYEMIAPIIGR
Ga0318570_105792001	3300032054	Soil	MSIILPDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQR
Ga0318553_101905101	3300032068	Soil	MSIILPDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPFRQRYD
Ga0306924_104382772	3300032076	Soil	MSITLPDSRALLRLALASIALALGLGRAAVASEVTTPVEQLHAGLMAIMKAGKTAPF
Ga0306924_111206551	3300032076	Soil	MLMSITLPDSRALLRLALASIALALGLGQAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVIG
Ga0306924_115169811	3300032076	Soil	MSITLPDSRALLRLALASIALALGLGQAAVASEVTTPVEQLHTGLMAIMQAGK
Ga0310914_103044611	3300033289	Soil	MLMSITLPDSRALLRLALASIALAFGLSQAAVASEVTTPVEQLHAGLMAIMQAGKTAPFRQRYDMIAPVISRTFDLEVIL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102412

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences