Metagenome Family F102730

Basic Information
Family ID	F102730
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	43 residues
Representative Sequence	METRFVIISYIATFGGIGVLVAAMLRRARSLAQRLPPEDRPWT
Number of Associated Samples	86
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	77.23 %
% of genes near scaffold ends (potentially truncated)	22.77 %
% of genes from short scaffolds (< 2000 bps)	88.12 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Most Common Taxonomy
Group	Unclassified (54.455 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (8.911 % of family members)
Environment Ontology (ENVO)	Unclassified (35.644 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.545 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.89% β-sheet: 0.00% Coil/Unstructured: 52.11%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF03100	CcmE	51.49
PF01578	Cytochrom_C_asm	28.71
PF00005	ABC_tran	2.97
PF03379	CcmB	0.99
PF11305	DUF3107	0.99
PF16327	CcmF_C	0.99
PF03918	CcmH	0.99
PF00578	AhpC-TSA	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2332	Cytochrome c biogenesis protein CcmE	Posttranslational modification, protein turnover, chaperones [O]	51.49
COG2386	ABC-type transport system involved in cytochrome c biogenesis, permease component	Posttranslational modification, protein turnover, chaperones [O]	0.99
COG3088	Cytochrome c-type biogenesis protein CcmH/NrfF	Posttranslational modification, protein turnover, chaperones [O]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
All Organisms	root	All Organisms	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
cellular organisms	root	All Organisms → cellular organisms	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	45.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	27.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	27.72 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Ilumatobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae	24.75 %
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	1.98 %
actinobacterium acAcidi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acAcidi	0.99 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Ilumatobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	24.75 %
Acidimicrobiales bacterium mtb01	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	1.98 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.99 %
actinobacterium acAcidi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acAcidi	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.46 %
Ilumatobacter nonamiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	11.88 %
Ilumatobacter coccineus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter coccineus	2.97 %
Acidimicrobiales bacterium mtb01	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	1.98 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.99 %
Ilumatobacter fluminis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter fluminis	0.99 %
actinobacterium acAcidi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acAcidi	0.99 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918007\|ConsensusfromContig180456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1261	Open in IMG/M
3300001686\|C688J18823_11066951	Not Available	512	Open in IMG/M
3300002568\|C688J35102_118615517	Not Available	577	Open in IMG/M
3300002568\|C688J35102_120846681	Not Available	1798	Open in IMG/M
3300002568\|C688J35102_120947104	Not Available	2802	Open in IMG/M
3300003996\|Ga0055467_10071866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	937	Open in IMG/M
3300004153\|Ga0063455_100130201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	1111	Open in IMG/M
3300004156\|Ga0062589_100347521	Not Available	1175	Open in IMG/M
3300004156\|Ga0062589_101242887	Not Available	716	Open in IMG/M
3300004156\|Ga0062589_101462111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	670	Open in IMG/M
3300004463\|Ga0063356_104003734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	634	Open in IMG/M
3300005168\|Ga0066809_10185436	Not Available	556	Open in IMG/M
3300005330\|Ga0070690_100243165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	1270	Open in IMG/M
3300005331\|Ga0070670_101281024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	671	Open in IMG/M
3300005331\|Ga0070670_102244131	Not Available	503	Open in IMG/M
3300005333\|Ga0070677_10229923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	910	Open in IMG/M
3300005354\|Ga0070675_101346933	Not Available	658	Open in IMG/M
3300005355\|Ga0070671_101736410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	554	Open in IMG/M
3300005365\|Ga0070688_100054875	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	2498	Open in IMG/M
3300005456\|Ga0070678_101620691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	608	Open in IMG/M
3300005544\|Ga0070686_101491601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	570	Open in IMG/M
3300005544\|Ga0070686_101937534	Not Available	503	Open in IMG/M
3300005578\|Ga0068854_100734525	Not Available	855	Open in IMG/M
3300005659\|Ga0073900_10127333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	1159	Open in IMG/M
3300005874\|Ga0075288_1090944	Not Available	505	Open in IMG/M
3300006854\|Ga0075425_101173728	Not Available	873	Open in IMG/M
3300009148\|Ga0105243_10479944	Not Available	1173	Open in IMG/M
3300009148\|Ga0105243_10846024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter coccineus	905	Open in IMG/M
3300009148\|Ga0105243_12495473	Not Available	556	Open in IMG/M
3300009176\|Ga0105242_12155526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300009177\|Ga0105248_10506275	Not Available	1361	Open in IMG/M
3300009177\|Ga0105248_12281946	Not Available	616	Open in IMG/M
3300010044\|Ga0126310_11713129	Not Available	522	Open in IMG/M
3300010371\|Ga0134125_12137353	Not Available	609	Open in IMG/M
3300010375\|Ga0105239_12438652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300010400\|Ga0134122_10678359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	965	Open in IMG/M
3300010401\|Ga0134121_13214232	Not Available	505	Open in IMG/M
3300011119\|Ga0105246_10232327	Not Available	1453	Open in IMG/M
3300011431\|Ga0137438_1113733	Not Available	827	Open in IMG/M
3300012046\|Ga0136634_10015789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2549	Open in IMG/M
3300012212\|Ga0150985_119771499	Not Available	560	Open in IMG/M
3300012212\|Ga0150985_120101820	Not Available	671	Open in IMG/M
3300012469\|Ga0150984_107118888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1513	Open in IMG/M
3300012469\|Ga0150984_115070557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → actinobacterium acAcidi	966	Open in IMG/M
3300012951\|Ga0164300_11075290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	524	Open in IMG/M
3300012964\|Ga0153916_10057144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3543	Open in IMG/M
3300013297\|Ga0157378_13150162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	512	Open in IMG/M
3300014498\|Ga0182019_10428199	Not Available	906	Open in IMG/M
3300014969\|Ga0157376_11156515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	801	Open in IMG/M
3300015162\|Ga0167653_1054891	Not Available	700	Open in IMG/M
3300015171\|Ga0167648_1001309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6645	Open in IMG/M
3300015189\|Ga0167667_1016155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2133	Open in IMG/M
3300015208\|Ga0167664_1132518	Not Available	723	Open in IMG/M
3300015371\|Ga0132258_10199018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4859	Open in IMG/M
3300015371\|Ga0132258_13519757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300015372\|Ga0132256_101430080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300015372\|Ga0132256_103538462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300017695\|Ga0180121_10013175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2973	Open in IMG/M
3300017944\|Ga0187786_10428055	Not Available	582	Open in IMG/M
3300018000\|Ga0184604_10269046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300018028\|Ga0184608_10098243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1220	Open in IMG/M
3300018051\|Ga0184620_10106225	Not Available	871	Open in IMG/M
3300018083\|Ga0184628_10565532	Not Available	579	Open in IMG/M
3300018429\|Ga0190272_10833686	Not Available	854	Open in IMG/M
3300018476\|Ga0190274_10960043	Not Available	926	Open in IMG/M
3300018476\|Ga0190274_11357780	Not Available	799	Open in IMG/M
3300021082\|Ga0210380_10094562	Not Available	1318	Open in IMG/M
3300022756\|Ga0222622_11001924	Not Available	614	Open in IMG/M
3300024347\|Ga0179591_1083817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	3159	Open in IMG/M
3300025271\|Ga0207666_1079038	Not Available	531	Open in IMG/M
3300025559\|Ga0210087_1061249	Not Available	750	Open in IMG/M
3300025899\|Ga0207642_10353755	Not Available	867	Open in IMG/M
3300025901\|Ga0207688_10309842	Not Available	967	Open in IMG/M
3300025925\|Ga0207650_10899878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter nonamiensis	751	Open in IMG/M
3300025927\|Ga0207687_10803743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	802	Open in IMG/M
3300025932\|Ga0207690_11748642	Not Available	519	Open in IMG/M
3300025934\|Ga0207686_10607298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter coccineus	861	Open in IMG/M
3300025935\|Ga0207709_11202066	Not Available	625	Open in IMG/M
3300026035\|Ga0207703_11967973	Not Available	561	Open in IMG/M
3300026089\|Ga0207648_10001322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	27562	Open in IMG/M
3300026142\|Ga0207698_10108451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	2321	Open in IMG/M
3300027724\|Ga0209582_1063445	Not Available	1295	Open in IMG/M
3300027915\|Ga0209069_10343832	Not Available	803	Open in IMG/M
3300027991\|Ga0247683_1013787	Not Available	693	Open in IMG/M
3300028778\|Ga0307288_10058541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1341	Open in IMG/M
3300028790\|Ga0307283_10220452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter fluminis	549	Open in IMG/M
3300029984\|Ga0311332_11298715	Not Available	588	Open in IMG/M
3300029987\|Ga0311334_11345057	Not Available	602	Open in IMG/M
3300030294\|Ga0311349_11069769	Not Available	755	Open in IMG/M
3300031170\|Ga0307498_10296686	Not Available	603	Open in IMG/M
3300031226\|Ga0307497_10494835	Not Available	602	Open in IMG/M
3300031232\|Ga0302323_103081817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	531	Open in IMG/M
3300031366\|Ga0307506_10149712	Not Available	818	Open in IMG/M
3300031726\|Ga0302321_100398730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	1498	Open in IMG/M
3300032174\|Ga0307470_10889863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter	698	Open in IMG/M
3300033433\|Ga0326726_10014636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Ilumatobacter → Ilumatobacter coccineus	6855	Open in IMG/M
3300034127\|Ga0370489_0100846	Not Available	842	Open in IMG/M
3300034127\|Ga0370489_0192580	Not Available	605	Open in IMG/M
3300034268\|Ga0372943_0548391	Not Available	756	Open in IMG/M
3300034354\|Ga0364943_0451170	Not Available	502	Open in IMG/M
3300034965\|Ga0370497_0054577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium mtb01	890	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.39%
Host-Associated	Host-Associated	36.63%
Engineered	Engineered	1.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.51%
Plants	Host-Associated → Plants	36.63%
Aquatic	Environmental → Aquatic	12.87%
Wastewater	Engineered → Wastewater	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.88%
Sediment	Environmental → Aquatic → Sediment	6.93%
Peat	Environmental → Terrestrial → Peat	5.94%
Freshwater	Environmental → Aquatic → Freshwater	3.96%
Marine	Environmental → Aquatic → Marine	1.98%
Activated Sludge	Engineered → Wastewater → Activated Sludge	1.98%
Floodplain	Environmental → Terrestrial → Floodplain	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.89%
Loam	Environmental → Terrestrial → Soil → Loam	8.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.93%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.96%
Ice	Environmental → Aquatic → Freshwater → Ice	1.98%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.98%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.99%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.93%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.95%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	4.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.98%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.99%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.99%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.91%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	7.92%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	4.95%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.95%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.96%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	3.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.96%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.97%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.97%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.98%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.98%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	1.98%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.99%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.99%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.99%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.99%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.99%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918007	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active_all	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005659	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-Kit	Engineered	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011431	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT157_2	Environmental	Open in IMG/M
3300012046	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ833 (21.06)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015162	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4c, rock/ice/stream interface)	Environmental	Open in IMG/M
3300015171	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3a, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015189	Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)	Environmental	Open in IMG/M
3300015208	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Samples st-15,16,16 pooled, 1st-3rd transect points, snow/rock/ice interface)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025559	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027724	Active sludge microbial communities from Klosterneuburg, Austria, studying microevolution and ecology of nitrifiers - Klosterneuburg WWTP active sludge metagenome KNB5-Kit (SPAdes)	Engineered	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027991	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK24	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029987	I_Fen_E3 coassembly	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034127	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_16	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M
3300034965	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A_all_C_01409390	2140918007	Soil	METRFVIISYIATFGGIGLLVAAMFRRARVLAKRLPPEDRPWT
C688J18823_110669511	3300001686	Soil	RTPPRGQPVMETGFVILSYVVTFGGIAVLVAAMMRRARGLSARLPPEDQPWT*
C688J35102_1186155172	3300002568	Soil	MQTTFVAICWVVTFGGIGVLTTMMMRRARKLAERLPPEDRPWT*
C688J35102_1208466813	3300002568	Soil	MQTTFVAICYIATFGGIGLLTAAMMRRARRLADKVPPEDRPWI*
C688J35102_1209471043	3300002568	Soil	METGFVILSYVVTFGGIGILVAAMMRRARGLSARLPPEDQPWT*
Ga0055467_100718663	3300003996	Natural And Restored Wetlands	FVVISYVATFGGIGALVVAMLRRARNLARRLPPEDRPWT*
Ga0063455_1001302013	3300004153	Soil	PVMETGFVILSYVVTFGGIAILVAAMMRRARGLSARLPPEDQPWT*
Ga0062589_1003475212	3300004156	Soil	VETSFVIISYVATFGGIGVLVLAMFRRARSLAARLPPEDRPWT*
Ga0062589_1012428871	3300004156	Soil	METGFVVLSYVVTFGGIAILVAAMMRRARSMSARLPPEDQPWT*
Ga0062589_1014621112	3300004156	Soil	MQTTFVTICWVATFGGIGVLTGLMMRRARQLADRVPPEERPWT*
Ga0063356_1040037342	3300004463	Arabidopsis Thaliana Rhizosphere	METRFVIASYVATFGGVGVLVLAMLRRARALAERLPPEARPWT*
Ga0066809_101854361	3300005168	Soil	METSFVALSYIVTFGSIGVLVMVMFRRARSLAQRLPPEDRPWT*
Ga0070690_1002431652	3300005330	Switchgrass Rhizosphere	METGFVILSYVATFGGIAILVAVMMRRARSMSARLPPEDQPWT*
Ga0070670_1012810242	3300005331	Switchgrass Rhizosphere	METGFVIVSYVATFGGIGVLVWAMFRRARALATRLPPEDRPWT*
Ga0070670_1022441312	3300005331	Switchgrass Rhizosphere	RGRRALDGQPGDGALMQTTFVTICWVATFGGIGVLTGLMMRRARQLADKVPPEERPWT*
Ga0070677_102299232	3300005333	Miscanthus Rhizosphere	METGFVVLSYVVTFGGIAILVAAMMRRARSMSARLPPEAQPWT*
Ga0070675_1013469332	3300005354	Miscanthus Rhizosphere	VMETGFVVLSYVVTFGGIAILVAAMMRRARSMSARLPPEDQPWT*
Ga0070671_1017364101	3300005355	Switchgrass Rhizosphere	METGFVIVSYVATFGGIGVLVWAMFRRARTLATRLPPEDRPWT*
Ga0070688_1000548752	3300005365	Switchgrass Rhizosphere	MKTGFVILSYVATFGGIAILVAVMMRRARSMSARLPPEDQPWT*
Ga0070678_1016206912	3300005456	Miscanthus Rhizosphere	METGFVILSYVVTFGGIGILVAAMMRRARSLSARLPPEDQPWI*
Ga0070686_1014916012	3300005544	Switchgrass Rhizosphere	METGFVVLSYVVTFGGIAILVAAMMRRARNLSARLPPEDQPWT*
Ga0070686_1019375342	3300005544	Switchgrass Rhizosphere	MQTTFVAICYVATFGGIGLLTAAMMRRARQLADKVPPEDRPWT*
Ga0068854_1007345252	3300005578	Corn Rhizosphere	MQTTFVTICWIATFGGIGVLTGLMMRRARQLADRVPPEERPWT*
Ga0073900_101273332	3300005659	Activated Sludge	METSFVLISYALTFGGIGVLAFGLMRRARQLAQRTTPEDRPWT*
Ga0075288_10909442	3300005874	Rice Paddy Soil	METRFVIISYIATFGGIGVLVAAMLRRARSLAERLPPEDRPWT*
Ga0075425_1011737281	3300006854	Populus Rhizosphere	METGFVILSYVATFGGIAILVAVMMRRARSMSARLPPEDQP
Ga0105243_104799442	3300009148	Miscanthus Rhizosphere	MRDGRCDGARVMETGFVIVSYVATFGGVGVLALAMLRRARTLAERLPPEDRPWI*
Ga0105243_108460243	3300009148	Miscanthus Rhizosphere	GDGALMQTTFVTICWVATFGGIGMLTGLMMRRARQLADKVPPEERPWT*
Ga0105243_124954732	3300009148	Miscanthus Rhizosphere	MQTTFVTICWVATFGGIGVLTGLMMRRARQLADKVPPEERPWT*
Ga0105242_121555262	3300009176	Miscanthus Rhizosphere	VETWFVIISYVATFGGVGLLTWAMFRRARSLARRLPPEDRPWT*
Ga0105248_105062753	3300009177	Switchgrass Rhizosphere	FVILSYVATFGGIAILVAVMMRRARSMSARLPPEDQPWT*
Ga0105248_122819462	3300009177	Switchgrass Rhizosphere	MQTTFVAICYVATFGGIGVLTAAMMRRARQLADKVPPEDRPWT*
Ga0126310_117131292	3300010044	Serpentine Soil	VMQTTFVALCYIATFGGLGVLVAGMLRRARSLARRLPPEDRPWT*
Ga0134125_121373531	3300010371	Terrestrial Soil	MQTTFVAICYVATFGGIGVLTAAMMRRARALAKRVPPEDRPWT*
Ga0105239_124386521	3300010375	Corn Rhizosphere	LMQTTFVAICYVATFGGIGVLTAAMMRRARQLADKVPPEERPWT*
Ga0134122_106783593	3300010400	Terrestrial Soil	METGFVIVSYVATFGGIGALVWAMFRRARSLAQRLPPED
Ga0134121_132142322	3300010401	Terrestrial Soil	METGFVIVSYLATFGGIGALVWAMFRRARSLAQRLPPEDRPWT*
Ga0105246_102323271	3300011119	Miscanthus Rhizosphere	ETGFVVLSYVVTFGGIAILVAAMMRRARSMSARLPPEDQPWT*
Ga0137438_11137333	3300011431	Soil	METGFVAVSYIATFGGIAALVLVMLRRARALAQRLPPEDRPWT*
Ga0136634_100157893	3300012046	Polar Desert Sand	MESAFVVICYAATFGSVGVLVAAMFRRARSLADRLPDEDRPWT*
Ga0150985_1197714991	3300012212	Avena Fatua Rhizosphere	LMETGFVILSYVVTFGGIAILVAAMMRRARGLSARLPPEDKPWT*
Ga0150985_1201018202	3300012212	Avena Fatua Rhizosphere	METGFVILSYVVTFGGIAVLVAAMMRRARGLSARLPPEDQPWT*
Ga0150984_1071188882	3300012469	Avena Fatua Rhizosphere	MQTTFVAICYIATFGGIGLLTALMMRRARQLADKVPPEDRPWI*
Ga0150984_1150705572	3300012469	Avena Fatua Rhizosphere	METGFVILSYVVTFGGIAILVAAMMRRARGLSARLPPEDQPWT*
Ga0164300_110752901	3300012951	Soil	AICYVATFGGIGVLTVAMMRRARSLAKKLPPEDLPWT*
Ga0153916_100571441	3300012964	Freshwater Wetlands	METRFVIISYIATFGGIGVLVAAMLRRARSLAQRLPPEDRPWT*
Ga0157378_131501622	3300013297	Miscanthus Rhizosphere	METGFVVLSYIATFGGIAILVAAMMRRARNLSARLPPEDQPWT*
Ga0182019_104281992	3300014498	Fen	MEMRFVVISYIATFGGIGLLVAVMLRRARALAQRLPPEDRPWT*
Ga0157376_111565153	3300014969	Miscanthus Rhizosphere	MQTTFVAICYVATFGGIGLLTAAMMRRARQLADKVPPEERPWT*
Ga0167653_10548913	3300015162	Glacier Forefield Soil	IISYIATFGGIGVLVAVMLRRARALAQRLPPEDRPWT*
Ga0167648_10013093	3300015171	Glacier Forefield Soil	MEIRFVIISYIATFGGIGVLVAVMLRRARALAQRLPPEDRPWT*
Ga0167667_10161553	3300015189	Glacier Forefield Soil	MQTTFVVICYVATFGGIGALVAVMLRRGRSLARRLPPEERPWT*
Ga0167664_11325181	3300015208	Glacier Forefield Soil	METGFVVVSYVATFGGIGALVWAMFRRARALAQRLPPEDRPWT*
Ga0132258_101990183	3300015371	Arabidopsis Rhizosphere	METAFVIVSYVATFGGTGILAALMFRRARSLAARLPPEDRPWI*
Ga0132258_135197572	3300015371	Arabidopsis Rhizosphere	METGFVILSYAVTFGGIAILVAAMMRRARSMSARLPPEDQPWT*
Ga0132256_1014300803	3300015372	Arabidopsis Rhizosphere	FVAICYVATFGGIGLLTAAMMRRARQLADKVPPEERPWT*
Ga0132256_1035384622	3300015372	Arabidopsis Rhizosphere	VETSFVILSYVVTFGGIAVLVAAMMRRARSMSARLPPEDQPWT*
Ga0180121_100131753	3300017695	Polar Desert Sand	METTFVIVSYVATFGGIGVLILAMLRRARALAQRLPPEDRPWT
Ga0187786_104280552	3300017944	Tropical Peatland	METRFVIISYIATFGGIGVLVAAMLRRARSLARRLPPEDRPWT
Ga0184604_102690462	3300018000	Groundwater Sediment	METGFVIVSYVATFGGVGVLVWAMFRRARTLATRLPPEDRPWT
Ga0184608_100982433	3300018028	Groundwater Sediment	METGFVIVSYVATFGGIGVLVWAMFRRARSTATRLPPEDRPWT
Ga0184620_101062253	3300018051	Groundwater Sediment	METGFVIVSYVATFGGIGVLVWAMFRRARALAQRLPPEDRPWT
Ga0184628_105655322	3300018083	Groundwater Sediment	METGFVAVSYIATFGGIAALVLVMLRRARALAQRLPPEDRPWT
Ga0190272_108336862	3300018429	Soil	METSFVIVSYVATFGGIGLLVLAMLRRARALAQRLPPEDRPWT
Ga0190274_109600433	3300018476	Soil	VETSFVILSYVATFGGVGLLTWAMLRRARTLAAKLPPEDRPWT
Ga0190274_113577802	3300018476	Soil	VETSFVIISYIATFGGVGLLTWAMFRRARSLAAKLPPEDRPWT
Ga0210380_100945623	3300021082	Groundwater Sediment	METGFVAVSYIATFGGIAALVLVMLRRARAIAQRLPPEDRPWT
Ga0222622_110019242	3300022756	Groundwater Sediment	METGFVIVSYVATFGGIGVLVWAMFRRARTLATRLPPEDRPWT
Ga0179591_10838173	3300024347	Vadose Zone Soil	METRFVIISYIATFGGIGVLVAAMFRRARVLAKRLPPEDRPWT
Ga0207666_10790381	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	METGFVVLSYVVTFGGIAILVAAMMRRARSMSARLPPEDQPWT
Ga0210087_10612492	3300025559	Natural And Restored Wetlands	METRFVIISYIATFGGIGVLVAAMLRRARNLARRLPPEDRPWT
Ga0207642_103537551	3300025899	Miscanthus Rhizosphere	METGFVILSYVATFGGIAILVAVMMRRARSMSARLPPEDQPWT
Ga0207688_103098422	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MQTTFVTICWVATFGGIGVLTGLMMRRARQLADKVPPEERPWT
Ga0207650_108998782	3300025925	Switchgrass Rhizosphere	METGFVIVSYVATFGGIGVLVWAMFRRARALATRLPPEDRPWT
Ga0207687_108037432	3300025927	Miscanthus Rhizosphere	MQTTFVAICYVATFGGIGLLTAAMMRRARQLADTVPPEDRPWT
Ga0207690_117486422	3300025932	Corn Rhizosphere	MQTTFVTICWVATFGGIGVLTGLMMRRARQLADRVPPEERPWT
Ga0207686_106072981	3300025934	Miscanthus Rhizosphere	VRHRRASPGGEPVMETGFVILSYVATFGGIAILVAVMMRRARSMSARLPPEDQPWT
Ga0207709_112020662	3300025935	Miscanthus Rhizosphere	METGFVIVSYVATFGGVGVLALAMLRRARTLAERLPPEDRPWI
Ga0207703_119679732	3300026035	Switchgrass Rhizosphere	METGFVILSYVATFGGIAILAAVMMRRARSMSARLPPEDQPWT
Ga0207648_1000132214	3300026089	Miscanthus Rhizosphere	METGFVILSYVATFGGIAILVAVMMRRARSMSARRPPEDQPWT
Ga0207698_101084514	3300026142	Corn Rhizosphere	MQTTFVAICYVATFGGIGVLTAAMMRRARQLADKVPPEERPWT
Ga0209582_10634452	3300027724	Activated Sludge	METSFVLISYALTFGGIGVLAFGLMRRARQLAQRTTPEDRPWT
Ga0209069_103438322	3300027915	Watersheds	VETWFVIISYVATFGGVGLLTWAMFRRARTLAAKLPPEDRPWT
Ga0247683_10137872	3300027991	Soil	METGFVILSYVVTFGGIAVLVAAMMRRARSMSARLPPEDQPWT
Ga0307288_100585412	3300028778	Soil	MQTTFVAICYAATFGGIGFLTAAMMRRARQLADKLPPEDRSWT
Ga0307283_102204522	3300028790	Soil	MQTTFVAICYVATFGGIGFLTAAMMRRARKLADKLPPEDRSWT
Ga0311332_112987151	3300029984	Fen	MEMRFVVISYIATFGGIGVLVAVMLRRARALAQRLPPEDRPWT
Ga0311334_113450571	3300029987	Fen	MEIRFVIISYIATFGGIGVLVAVMLRRARALAQRLPPEDRPWT
Ga0311349_110697691	3300030294	Fen	MEMRFVVISYIATFGGIGVLVAVMLRRARALDQRLPPEDRP
Ga0307498_102966862	3300031170	Soil	VETWFVIISYVATFGGVGLLTWAMFRRARILAAKLPPEDRPWT
Ga0307497_104948351	3300031226	Soil	AISYLATFGGVGLLTWAMFRRARTLAAKLPPEDRPWT
Ga0302323_1030818172	3300031232	Fen	METQFVIVSYVATFGGIGVLVVAMLRRARSLAQRLPPEDRPWT
Ga0307506_101497123	3300031366	Soil	WFVIISYVATFGGVGLLTWAMFRRARTLAAKLPPEDRPWT
Ga0302321_1003987303	3300031726	Fen	RAPRRGGLLMEIRFVVISYIATFGGIGVLVAVMLRRARALAQRLPPEDRPWT
Ga0307470_108898632	3300032174	Hardwood Forest Soil	METGFVVLSYVVTFGGIAILVAAMMHRARNLSARLPPEDQPWT
Ga0326726_100146365	3300033433	Peat Soil	METRFVIISYIATFGGIGVLVAAMLRRARVLAQRLPPEDRPWT
Ga0370489_0100846_650_781	3300034127	Untreated Peat Soil	VETGFVIVSYVATFGGVGLLVLAMFKRARALAAKLPPEDRSWT
Ga0370489_0192580_310_441	3300034127	Untreated Peat Soil	METGFVILSYVATFGGVAVLTLAMFRRARVLAERLPPEDLPWT
Ga0372943_0548391_86_217	3300034268	Soil	VETSFVIISYVATFGGVGILVLAMFRRARTLAQRLPPEDRPWT
Ga0364943_0451170_312_443	3300034354	Sediment	METSFVIVSYVATFAGIGVLILAMLRRARALAQRLPPEDRPWT
Ga0370497_0054577_493_624	3300034965	Untreated Peat Soil	METSFVIICYVATFGGIGVLVVAMLRRARSLAQRLPPEDRPWT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102730

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign