Metagenome Family F102869

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102869
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	84 residues
Representative Sequence	MDRPEPDSLDAVLSLALALAAGDQEAVEVFLRAHEPADLAVAGADIIWRMAAALGQMVEPKRSAPQMIHVFAQALRDDAAGPV
Number of Associated Samples	79
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.27 %
% of genes near scaffold ends (potentially truncated)	28.71 %
% of genes from short scaffolds (< 2000 bps)	83.17 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.406 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (18.812 % of family members)
Environment Ontology (ENVO)	Unclassified (29.703 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.505 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 56.76% β-sheet: 0.00% Coil/Unstructured: 43.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.104.1.0: automated matches	d6t0ja1	6t0j	0.61472
c.55.3.4: Transposase inhibitor (Tn5 transposase)	d1musa1	1mus	0.60915
a.7.12.0: automated matches	d2i0ma_	2i0m	0.60497
a.104.1.1: Cytochrome P450	d1wiya_	1wiy	0.60269
c.60.1.2: Histidine acid phosphatase	d1qfxa_	1qfx	0.59433

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF05995	CDO_I	8.91
PF00330	Aconitase	5.94
PF05090	VKG_Carbox	3.96
PF05988	DUF899	2.97
PF13360	PQQ_2	1.98
PF00775	Dioxygenase_C	1.98
PF17137	DUF5110	0.99
PF00456	Transketolase_N	0.99
PF01250	Ribosomal_S6	0.99
PF08534	Redoxin	0.99
PF03752	ALF	0.99
PF12733	Cadherin-like	0.99
PF08281	Sigma70_r4_2	0.99
PF00694	Aconitase_C	0.99
PF01934	HepT-like	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG5553	Predicted metal-dependent enzyme of the double-stranded beta helix superfamily	General function prediction only [R]	8.91
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	2.97
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.98
COG0021	Transketolase	Carbohydrate transport and metabolism [G]	0.99
COG0360	Ribosomal protein S6	Translation, ribosomal structure and biogenesis [J]	0.99
COG2361	HEPN domain protein, predicted toxin of MNT-HEPN system	Defense mechanisms [V]	0.99
COG2445	Uncharacterized HEPN domain protein YutE, UPF0331/DUF86 family	General function prediction only [R]	0.99
COG3959	Transketolase, N-terminal subunit	Carbohydrate transport and metabolism [G]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.41 %
All Organisms	root	All Organisms	40.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.41 %
cellular organisms	root	All Organisms → cellular organisms	40.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.41 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.41 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	33.66 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.41 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.41 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.80 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.41 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	12.87 %
Euzebyales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales	1.98 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.41 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.87 %
unclassified Euzebyales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales	1.98 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.41 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.87 %
Euzebyales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	1.98 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.41 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.87 %
Euzebyales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	1.98 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.41 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	12.87 %
Euzebyales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	1.98 %
Streptomyces sp. PIP175	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PIP175	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_108075293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300003319\|soilL2_10189791	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300003319\|soilL2_10233696	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300003321\|soilH1_10048476	All Organisms → cellular organisms → Bacteria	2145	Open in IMG/M
3300005167\|Ga0066672_10516375	Not Available	775	Open in IMG/M
3300005171\|Ga0066677_10630905	Not Available	605	Open in IMG/M
3300005177\|Ga0066690_10426117	Not Available	900	Open in IMG/M
3300005179\|Ga0066684_10197661	Not Available	1299	Open in IMG/M
3300005179\|Ga0066684_10376415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	952	Open in IMG/M
3300005181\|Ga0066678_10069629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2056	Open in IMG/M
3300005329\|Ga0070683_100053451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3743	Open in IMG/M
3300005440\|Ga0070705_100005081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6400	Open in IMG/M
3300005445\|Ga0070708_100304477	Not Available	1501	Open in IMG/M
3300005458\|Ga0070681_10078333	Not Available	3262	Open in IMG/M
3300005467\|Ga0070706_100493374	Not Available	1139	Open in IMG/M
3300005468\|Ga0070707_101191499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	728	Open in IMG/M
3300005471\|Ga0070698_100759132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	913	Open in IMG/M
3300005518\|Ga0070699_100965424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300005529\|Ga0070741_10003339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	40176	Open in IMG/M
3300005529\|Ga0070741_10007200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23235	Open in IMG/M
3300005529\|Ga0070741_10019102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10989	Open in IMG/M
3300005529\|Ga0070741_10044775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5568	Open in IMG/M
3300005529\|Ga0070741_10980604	Not Available	726	Open in IMG/M
3300005532\|Ga0070739_10041393	All Organisms → cellular organisms → Bacteria	3154	Open in IMG/M
3300005536\|Ga0070697_100554623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1008	Open in IMG/M
3300005546\|Ga0070696_100529955	Not Available	941	Open in IMG/M
3300005556\|Ga0066707_11030439	Not Available	501	Open in IMG/M
3300005557\|Ga0066704_10840693	Not Available	569	Open in IMG/M
3300005559\|Ga0066700_11128157	Not Available	512	Open in IMG/M
3300005561\|Ga0066699_10542185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300005568\|Ga0066703_10489135	Not Available	732	Open in IMG/M
3300006032\|Ga0066696_10237973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	1173	Open in IMG/M
3300006800\|Ga0066660_10781385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	778	Open in IMG/M
3300006800\|Ga0066660_11402344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	548	Open in IMG/M
3300006847\|Ga0075431_101577724	Not Available	614	Open in IMG/M
3300006854\|Ga0075425_102699848	Not Available	548	Open in IMG/M
3300006876\|Ga0079217_10090077	Not Available	1351	Open in IMG/M
3300006894\|Ga0079215_10081682	Not Available	1365	Open in IMG/M
3300006918\|Ga0079216_10016950	Not Available	2649	Open in IMG/M
3300007004\|Ga0079218_10123628	Not Available	1832	Open in IMG/M
3300009012\|Ga0066710_101990213	Not Available	863	Open in IMG/M
3300009012\|Ga0066710_102428479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Euzebyales → unclassified Euzebyales → Euzebyales bacterium	760	Open in IMG/M
3300009137\|Ga0066709_103855371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. PIP175	545	Open in IMG/M
3300009137\|Ga0066709_104638671	Not Available	503	Open in IMG/M
3300009143\|Ga0099792_10207037	All Organisms → cellular organisms → Bacteria	1119	Open in IMG/M
3300010039\|Ga0126309_10870288	Not Available	594	Open in IMG/M
3300010401\|Ga0134121_12699644	Not Available	541	Open in IMG/M
3300011270\|Ga0137391_11126316	Not Available	633	Open in IMG/M
3300012198\|Ga0137364_10161274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1627	Open in IMG/M
3300012285\|Ga0137370_10046560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2314	Open in IMG/M
3300012927\|Ga0137416_11814766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300012929\|Ga0137404_10782925	Not Available	866	Open in IMG/M
3300012929\|Ga0137404_11597887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300012930\|Ga0137407_10351119	Not Available	1358	Open in IMG/M
3300015264\|Ga0137403_10276069	Not Available	1583	Open in IMG/M
3300015358\|Ga0134089_10465802	Not Available	549	Open in IMG/M
3300015371\|Ga0132258_12125687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1411	Open in IMG/M
3300018422\|Ga0190265_10478353	All Organisms → cellular organisms → Bacteria	1355	Open in IMG/M
3300018429\|Ga0190272_11601633	All Organisms → cellular organisms → Bacteria → Terrabacteria group	668	Open in IMG/M
3300018429\|Ga0190272_12126467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300018429\|Ga0190272_12863250	Not Available	533	Open in IMG/M
3300018433\|Ga0066667_11524458	Not Available	592	Open in IMG/M
3300018466\|Ga0190268_10105956	Not Available	1321	Open in IMG/M
3300018482\|Ga0066669_10596748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	967	Open in IMG/M
3300018482\|Ga0066669_11383579	Not Available	637	Open in IMG/M
3300019377\|Ga0190264_10195890	Not Available	1107	Open in IMG/M
3300019377\|Ga0190264_10817329	Not Available	712	Open in IMG/M
3300019377\|Ga0190264_11121981	Not Available	644	Open in IMG/M
3300019377\|Ga0190264_11627465	Not Available	570	Open in IMG/M
3300020170\|Ga0179594_10377553	Not Available	538	Open in IMG/M
3300020181\|Ga0196958_10002250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5904	Open in IMG/M
3300024430\|Ga0196962_10227595	Not Available	603	Open in IMG/M
3300025885\|Ga0207653_10186790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	777	Open in IMG/M
3300025910\|Ga0207684_11317579	Not Available	594	Open in IMG/M
3300025912\|Ga0207707_10133543	All Organisms → cellular organisms → Bacteria	2171	Open in IMG/M
3300025921\|Ga0207652_11283162	Not Available	635	Open in IMG/M
3300025922\|Ga0207646_10912355	Not Available	779	Open in IMG/M
3300026309\|Ga0209055_1073276	Not Available	1426	Open in IMG/M
3300026326\|Ga0209801_1036870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2285	Open in IMG/M
3300026550\|Ga0209474_10359086	Not Available	806	Open in IMG/M
3300026552\|Ga0209577_10546155	Not Available	741	Open in IMG/M
3300026552\|Ga0209577_10851143	Not Available	511	Open in IMG/M
3300027637\|Ga0209818_1225325	Not Available	557	Open in IMG/M
3300027773\|Ga0209810_1086554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1453	Open in IMG/M
3300027903\|Ga0209488_10265582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1285	Open in IMG/M
3300027909\|Ga0209382_12229211	Not Available	517	Open in IMG/M
3300028536\|Ga0137415_11113713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300030006\|Ga0299907_10234788	Not Available	1508	Open in IMG/M
3300031229\|Ga0299913_10258236	Not Available	1726	Open in IMG/M
3300031229\|Ga0299913_11287234	Not Available	689	Open in IMG/M
3300031720\|Ga0307469_10887047	Not Available	825	Open in IMG/M
3300031720\|Ga0307469_11755947	Not Available	599	Open in IMG/M
3300031720\|Ga0307469_12279032	Not Available	528	Open in IMG/M
3300031740\|Ga0307468_101726759	Not Available	590	Open in IMG/M
3300031820\|Ga0307473_10308359	Not Available	1000	Open in IMG/M
3300031911\|Ga0307412_10776149	Not Available	830	Open in IMG/M
3300032002\|Ga0307416_100722363	Not Available	1087	Open in IMG/M
3300032180\|Ga0307471_100049257	Not Available	3460	Open in IMG/M
3300032180\|Ga0307471_103594443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300034268\|Ga0372943_0016999	Not Available	3841	Open in IMG/M
3300034268\|Ga0372943_0933735	Not Available	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.06%
Host-Associated	Host-Associated	5.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.06%
Plants	Host-Associated → Plants	5.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.06%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.95%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.24%
Loam	Environmental → Terrestrial → Soil → Loam	15.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.95%
Sand	Environmental → Terrestrial → Soil → Sand	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.95%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.98%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	18.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.95%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.96%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020181	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_10	Environmental	Open in IMG/M
3300024430	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027773	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1080752932	3300000956	Soil	MEQPDPDVLDAVLSLSIAVAAGDDEAVELFLRAHNPEQVAIAGGHVIWRMATALGQMVEPKRSPPQMIHVFAQALRDGEPG*
soilL2_101897911	3300003319	Sugarcane Root And Bulk Soil	LDAVLSLSIAVAAGDEEAVELFLRSHEGDELAVAGGHVIWRMATALGQLVEPRRSPPQMIHVFAQALRDEAELGDEES*
soilL2_102336963	3300003319	Sugarcane Root And Bulk Soil	VDAVLSLTIAAAAGDDEAIELLLRAHDPGDLAVAGTHVIWRMATALGQLVEPTRTPPQMLHVFSQALKDESGGLSG*
soilH1_100484764	3300003321	Sugarcane Root And Bulk Soil	LSLTIAAAAGDDEAIELLLRAHDPGDLAVAGTHVIWRMATALGQLVEPTRTPPQMLHVFSQALKDESGGLSG*
Ga0066672_105163752	3300005167	Soil	MDPPDPEVVDAVLSLAIAAGAGDEEAIEVFLRAFDPADLAVTAGGVIWRMATALGQLVDPPRSPPQMLHVFAQALRDAGPGGPDLAS*
Ga0066677_106309051	3300005171	Soil	MDPLDPELLDAALGLALATGNGDKEAVEVFLHASEPADLAVAGAQVIWRMAAALGRLVEPRRSAPQMIHVFAQALRERGDEFGGAPGGAS*
Ga0066690_104261172	3300005177	Soil	MDPLDPELLDAALGLALATGNGDKEAVEVFLHASEPADLAVAGAQVIWRMAAALGRLVAPRRSAPQMIHVFAQALRERGDEFGGAPGGAS*
Ga0066684_101976613	3300005179	Soil	MDPFDPELVDAVLGMALASGVDDTEAVEVFLRASEPADLAVAGAHVIWRMAAALGRLVNPQRSAPQMIHVFAQALKEPEADLGEQA*
Ga0066684_103764152	3300005179	Soil	MERADADSLDVVLSLALAVAAGDEEAIEVFLRGNDPAGLAVAGADVIWRMAGAMGQLVDPQRSAPQMIHVFAQALRDEQP*
Ga0066678_100696291	3300005181	Soil	LDAALGLALATGNGDKEAVEVFLHASEPADLAVAGAQVIWRMAAALGRLVEPRRSAPQMIHVFAQALRERGDEFGGAPGGAS*
Ga0070683_1000534513	3300005329	Corn Rhizosphere	MEQPDPDALDAVLSLSIAVAAGDAEAAELFLRSHEADELAIAAGHVIWRMATALGQLVEPRRSPPQMIHVFAQALRDEADGFGGPDVVGGPDELGGTGS*
Ga0070705_1000050815	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MEQPDPEVVDAVLSLTLAVAAGDDEAVEFLLRSHDPADLAIAGGRAIWRMATALGQMVEPKRTAPQMIHVFAQAVREPADGGGMSG*
Ga0070708_1003044771	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDSPDPDALDAVLSLALAVAAGDDEAIELFLRGNEPADLVVAGADVIWRMAGALGQLVEPKRSAPQMIHVFAQALRDDAGPA*
Ga0070681_100783334	3300005458	Corn Rhizosphere	MEPVDPELLDNVLSLALAAGNGDEEAVDVILQASEPADLAVTGAWVIWRMAAALGRLVQPERSAPQMIHVFAQA
Ga0070706_1004933742	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VLSLTLAVAAGDDEAVEFLLRSHDPADLAIAGGRAIWRMATALGQMVEPKRTAPQMIHVFAQAVREPADGGGMSG*
Ga0070707_1011914991	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	ALDPEFVDAVLSLALAAGNGDDEAVEVFLRATEPENLAVAGAQVIWRMAAALGQLVNPTRSAPQIIHVFAQALKVPGDAVRGMGEQA*
Ga0070698_1007591322	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MDQSDPELVDAVLSLTLAAANGDEEAVELFLRGYEPADLVLAGADVIWRMATALGQMVDPPRSPPQMIHVFAQALREAGPDFAT*
Ga0070699_1009654241	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MEQPDPEVVDAVLSLTLAVAAGDDEAVEFLLRSHDPADLAIAGGRAIWRMATALGQMVEPKRTAPQMIHV
Ga0070741_1000333911	3300005529	Surface Soil	MDRPEPDSLDAVLSLALALAAGDQEAVEVFLRAHEPADLAVAGADIIWRMAAALGQMVEPKRSAPQMIHVFAQALRDDAAGPV*
Ga0070741_1000720015	3300005529	Surface Soil	MDAFDPELLDAVLGLALAAGNGDDEAVEVFLRASEPADLAVTGARVIWRMAAALGRMVQPERSAPQMIHVFAEALKDQG*
Ga0070741_100191021	3300005529	Surface Soil	MEPVDPELLDNVLSLALAAGIGDEEAVEVILRSSEPADLAVTGAWVIWRMAAALGRLVQPERSAPQMIHVFAQALKEEA*
Ga0070741_100447753	3300005529	Surface Soil	MDQPDPDVLDAVLSLSIAVAAGDEEAVEIFLRDHQPEDLAVAAGHVVWRMAAALGQLVEPKRSPPQMIHVFAQALREDEGQPG*
Ga0070741_109806042	3300005529	Surface Soil	MDPLDPELLDAVLGLALAAGIGDEEAVEIFLRGSDPTDLAVTAAGVIWRMAAALGRMVQPERSAPQMIHVFAQ
Ga0070739_100413934	3300005532	Surface Soil	MDAFDSELLDAVLSLALAAGNGDDEAVEVFLRSAEPADLAVTGAHVIWRMAAALGRMVQPERSAPQMIHVFAQALKEQG*
Ga0070697_1005546231	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MEQPDPEVVDAVLSLTLAVAAGDDEAVEFLLRSHDPADLAIAGGRAIWRMATALGQMVEPKRTAPQMIHVFAQAVREPGDGGGMSG*
Ga0070696_1005299552	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	DVVDAVLSLTLAVAAGDDEAVEVLLRSHDPADLAIAGGHVIWRMAAALGQMVEPPRSPPQMIHIFAQVMKEPNQGLGDTES*
Ga0066707_110304391	3300005556	Soil	ALATGNGDKEAVEVFLHASEPADLAVAGAQVIWRMAAALGRLVEPRRSAPQMIHVFAQALRERGDEFGGAPGGAS*
Ga0066704_108406931	3300005557	Soil	MDPPDPEVVDAVLSLAIAAGAGDEEAIEVFLRAFDPADLAVTAAGVIWRMATALGQLVDPPRSPPQMLHVFAQAL
Ga0066700_111281571	3300005559	Soil	LVDTVLSLAIAVGAGDEEAVEVFLRSSEPADLAVVGGDVIWRMATALGQMVDPPRSAPQMLHVFGRALREAEPGDEFGAADSS*
Ga0066699_105421852	3300005561	Soil	MEPLDPELVDAVLGMALAAGVGDTEAVEVFLRVSEPGDLAVVGAQVVWRMAAALGQLVTPPRSAPQMIHALAQALKEPGDDLGAQP*
Ga0066703_104891352	3300005568	Soil	MDPPDPEVVDAVLSLAIAAGAGDEEAIEVFLRAFDPADLAVTAAGVIWRMATALGQLVDPPRSPPQMLHVFAQALRDAGPGGPDLAS*
Ga0066696_102379732	3300006032	Soil	MDRPDPDALDAVLSLALAVAAGDEEAAEVFLRAHEPADLAVAGADVVWRMAAALGQLVEPKRSAPQMIHVFAEALRDADADAGGPS*
Ga0066660_107813852	3300006800	Soil	MEPLDPELVDAVLGMALAAGIGDTEAVEVFLRASEPGDLAVVGAQVVWRMAAALGQLVTPPRSAPQMIHALAQALKEPGDDLGAQP*
Ga0066660_114023441	3300006800	Soil	MDRPDPELVDTVLSLAIAVGAGDEEAVEVFLRSSEPADLAVVGGDVIWRMATALGQMVDPPRSAPQMLHVFGRALREAEPGDEFGATDSGPDFAS*
Ga0075431_1015777241	3300006847	Populus Rhizosphere	EQPDPDVVDAVLSLSIAVAAGDEGAIDVFLRSHSAEDLAIAGGHIIWRMATALGQLVEPTRSPPQMIHVFAQALREASELHGGGEET*
Ga0075425_1026998482	3300006854	Populus Rhizosphere	MEQPDPEVVDAVLSLTLAVAAGDDEAVEFLLRSHDPADLAIAGGRAIWRMATALGQMVEPKRTAPQMIHVFAQAVREPAEGGGMSG*
Ga0079217_100900773	3300006876	Agricultural Soil	MEQPDIEVLDAVLSLTLAIAAGDDEAVEVLLRGHDPADLAVAGGRVIWRMATALGQMVEPNRSAPQMVHVFAQAMRADEGGLSG*
Ga0079215_100816822	3300006894	Agricultural Soil	MEQPDLEVLDAVLSLTLAIAAGDDEAVEVLLRGHDPADLAVAGGRVIWRMATALGQMVEPNRSAPQMVHVFAQAMRADEGGLSG*
Ga0079216_100169503	3300006918	Agricultural Soil	MEQLDPELVDAALSMALAVAAGDDEAVEVLLRSYDPADLAIAASRVIWRMATALGQMVEPTRSPPQMIHVFSQAMRAPDDVGDMSG*
Ga0079218_101236281	3300007004	Agricultural Soil	MEQLDPEVVDAALSMTLAVAAGDDEAVEVLLRSYDPADLAIAASRVIWRMATALGQMVEPTRSPPQMIHVFSQAMRAPDDVGDMSG*
Ga0066710_1019902131	3300009012	Grasslands Soil	MDPLDPELLDAALGLALATGNGDKEAVEVFLHASEPADLAVAGAQVIWRMAAALGRLVEPRRSAPQMIHVFAQALRERGDEFGGAPGGAS
Ga0066710_1024284791	3300009012	Grasslands Soil	MERADADSLDVVLSLALAVAAGDEEAIEVFLRGNDPAGLAVAGADVIWRMAGAMGQLVDPQRSAPQMIHVFAQALRD
Ga0066709_1038553711	3300009137	Grasslands Soil	MERADADSLDVVLSLALAVAAGDEEAIEVFLRGNDPAGLAVAGADVIWRMAGAMGQLVDPQRSAPQMIHVFAQALHDEQP*
Ga0066709_1046386711	3300009137	Grasslands Soil	MEPPEPDTLDAVLSLALAVAAGDEEAVKVFLRAHEPEDLAVAGADVIWRMANDLGQLVEPKRSAPQMIHVFAQAQRDGDPGDGAT*
Ga0099792_102070371	3300009143	Vadose Zone Soil	MGGMDDSDLELTDAVLSMAIAAGTGDEEALELFLRASDPAHLAVAGADVIWRMATALGQMVDPPRSPPQMIHVFAQALRQPGDEFGDAVAEP*
Ga0126309_108702881	3300010039	Serpentine Soil	MDQPDPDVVDAVFSLTLAVASGDDEAVEVLLRSHDPADFAVAGSQVIWRMAVALGQMVQPRRSPPQMIHVFAQAMREPGDEGGLPG*
Ga0134121_126996441	3300010401	Terrestrial Soil	DPEVVDAVLSLTLAVAAGDDEAVEFLLRSHDPADLAIAGGLTLWRMATALGQMVEPKRTAPQMIHVFAQAVREPADGGGMSG*
Ga0137391_111263161	3300011270	Vadose Zone Soil	THARMGGMDDSDLELTDAVLSMAIAAGTGDEEALELFLRASDPAHLAVAGADVIWRMAGALGQLVEPKRSAPQMIHVFAQALRDDADRA*
Ga0137364_101612742	3300012198	Vadose Zone Soil	MDRPDPDLVDAVLSMALAAGNGDEAALEVFLRDFDPADLAVAGAGVIWRMATALGQVVEPRRSPPQIVHVFAQALREPGDEFGGAGSS*
Ga0137370_100465603	3300012285	Vadose Zone Soil	MDRPDPDLVDAVLSMALAAGNGDEAALEVFLRDFDPADLAVAGAGVIWRMATALGQVVEPRRSPPQIVHVFAQALREPRDEFGGAGSS*
Ga0137416_118147661	3300012927	Vadose Zone Soil	MGGMDDSDLELTDAVLSMAIAAGTGDEEALELFLRASDPAHLAVAGADVIWRMATALGQMVDPPRSPPQMIHVFAQALRQPGDEFGDAGSS*
Ga0137404_107829251	3300012929	Vadose Zone Soil	MDQPDPELIDAVLSLAIAAGAGDDEAVEVFLRTFEPADLAATAADVIWRMATALGQMVDPPRSPPQMLHVFAQALRDTGEFDAT*
Ga0137404_115978871	3300012929	Vadose Zone Soil	MGGMDDSDLELTDAVLSMAIAAGTGDEEALELFLRASDPAHLAVAGADVIWRMATALGQMVDPPRSPPQMIHVFAQALREPGNE*
Ga0137407_103511193	3300012930	Vadose Zone Soil	MGGMDDSDLELTDAVLSMAIAAGTGDEEALELFLRASDPAHLAVAGADVIWRMATALGQMVDPPRSPPQMIHVFAQALRQPGDEFGDAVADP*
Ga0137403_102760693	3300015264	Vadose Zone Soil	MGGMDDSDLELTDAVLSMAIAAGTGDEEALELFLRASDPAHLAVAGADVIWRMATALGQMVDPPRSPPQMLHVFAQALRDTGEFDAT*
Ga0134089_104658022	3300015358	Grasslands Soil	MDRPDPDALDVVLSLALAVAAGDDEAVEVFLRGNEPADLAVAGADVIWRMAGALGQLVEPTRSAPQMIHVFAQALRDDADPA*
Ga0132258_121256872	3300015371	Arabidopsis Rhizosphere	MAAMDQPDPDVLDAILSLSRAVAAGDEGAIDVFLRSHSAEELALAGGHIIWRMATALGQLVEPRRSPPQMIHVFAQALRDAVDDPADSEP*
Ga0190265_104783532	3300018422	Soil	MKQDPDVIDAVLSLTLAVAAGDDEATEVLLRGHDPADLAIAGGRVIWRMATALGQMVEPQRSPPQMIHVFAQAMREPANEGGMSG
Ga0190272_116016331	3300018429	Soil	MEQPDPDVLDAVLSLSIAVAAGDEGAIDVFLRSHTAEDLAIAGGHVIWRMATALGQMLEPKRSPPQMIHVFAQALREPAGDPND
Ga0190272_121264671	3300018429	Soil	VDQPDPEVLDIVLSMAIAAGAGDDEAVELFLRGSDPADLAIVGADVIWRMASALGQMVEPTRSPPQMIHVFAQALRGAGEA
Ga0190272_128632502	3300018429	Soil	MDHPDPDAVDAVLSMALAAGIGDDEAVQMLLRGSDPAHLATAGADVIWRMATALGQMVQPARSAPQMIHVFAQALRGGGDEFGDGGSS
Ga0066667_115244582	3300018433	Grasslands Soil	MDPLDPELLDAALGLALATGNGDKEAVEVFLHASEPADLAVAGAQVIWRMAAALGRLVEPRRSAPQMIHVFAQALKEPEADLGEQA
Ga0190268_101059562	3300018466	Soil	MEQPDPEAVAAVLSLTLAVAAGDDEAVELLLRSQDPADLAVAGGRVIWQMATALGQMVEPRRSPTQMIHVFSQAMREADEAGDMSG
Ga0066669_105967482	3300018482	Grasslands Soil	MDRPDPDLVDAVLSMALAAGNGDEAALEVFLRDFDPADLAVAGAGVIWRMATALGQVVEPRRSPPQIVHAFAQALRAPGDEFGGAGSS
Ga0066669_113835792	3300018482	Grasslands Soil	GGDGGRRRPGPDALDAGLSLARAVAAGDEEAAEVFLRAHEPADLAVAGADVVWRMAAALGQLVEPKRSAPQMIHVFAEALRDADADAGGPS
Ga0190264_101958902	3300019377	Soil	MEQPDPEVVDAALSMTLAVAVGDDEAVEVLLRSQDPADLAVAGGRVIWQMATALGQMVEPKRSPPQIIHVFGQAMREPDNGSDMSG
Ga0190264_108173292	3300019377	Soil	MEQPDPDVLDAVLSLSIAVAAGDEGAIDVFLRSHTAEDLAIAGGHVIWRMATALGQMLEPKRSPPQMIHVFAQALREPAGDPNDFEDGRSIG
Ga0190264_111219811	3300019377	Soil	MKQDPDVIDAVLSLTLAVAAGDDEATEVLLRGHDPAGLAIAGGRVIWRMATALGQMVEPQRSPPQMIHVFAHALREPDQGLDADS
Ga0190264_116274652	3300019377	Soil	DAVLSLTLAIAAGDDEAVEVLLRGHDPADLAVAGGRVIWRMATALGQMVEPNRSAPQMVHVFAQAMRADEGGLSG
Ga0179594_103775531	3300020170	Vadose Zone Soil	MDRPESDALDVVLSLALAVAAGDDEAVELFLRGNEPADLAVAGADVIWRMAGALGQLVEPRRSAPQMIHVFAQALRDDADQT
Ga0196958_100022503	3300020181	Soil	MEQPDPDVLDAVLSLSLAVAAGDEDAVEVFLRSHEPEDLLIAAGHAIWRMAAALGQMVEPKRSPPQMIHVFAQALRDGEAG
Ga0196962_102275951	3300024430	Soil	MEPPDPEAVDAVLSLTLAVAAADDEAVEVLLRSQDPGELAVAGGHVIWRMATALGQMVEPARSAPQMIHVFAQAMRESADEGGMSG
Ga0207653_101867901	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MEQPDPEVVDAVLSLTLAVAAGDDEAVEFLLRSHDPADLAIAGGRAIWRMATALGQMVEPKRTAPQMIHVFAQAVREPADGGGMSG
Ga0207684_113175791	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	GGARMGCMEQPDPEVVDAVLSLTLAVAAGDDEAVEFLLRSHDPADLAIAGGRAIWRMATALGQMVEPKRTAPQMIHVFAQAVREPADGGGMSG
Ga0207707_101335432	3300025912	Corn Rhizosphere	MEPVDPELLDNVLSLALAAGNGDEEAVDVILQASEPADLAVTGAWVIWRMAAALGRLVQPERSAPQMIHVFAQALREEA
Ga0207652_112831622	3300025921	Corn Rhizosphere	MEQPDPDALDAVLSLSIAVAAGDAEAAELFLRSHEADELAIAAGHVIWRMATALGQLVEPRRSPPQMIHVFAQALRDEADGFGGPDVVGGPDELGGTGS
Ga0207646_109123551	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MGVMDYSDPELLDTVLSLAIAAGNGDEEAIEVFLRASDPADLAVVGADVIWRMATALGQMVDPPRSPPQMLHVFAQALRGVADDA
Ga0209055_10732762	3300026309	Soil	MDPLDPELLDAALGLALATGNGDKEAVDALFHASEPADLAVAGAQVIWRMAAALGRLVEPRRSAPQMIHVFAQALRERGDEFGGAPGGAS
Ga0209801_10368701	3300026326	Soil	LALATGNGDKEAVEVFLHASEPADLAVAGAQVIWRMAAALGRLVEPRRSAPQMIHVFAQALRERGDEFGGAPGGAS
Ga0209474_103590861	3300026550	Soil	MDRPDPDALDAVLSLALAVAAGDEEAAEVFLRAHEPADLAVAGADVVWRMAAALGQLVEPKRSAPQMIHVFAEALRDADADAGGPS
Ga0209577_105461552	3300026552	Soil	MEPLDPELVDAVLGMALAAGIGDTEAVEVFLRVSEPGDLAVVGAQVVWRMAAALGQLVTPPRSAPQMIHALAQALKEPGDDLGAQP
Ga0209577_108511432	3300026552	Soil	MDRPDPELVDTVLSLAIAVGAGDEEAVEVFLRSSEPADLAVVGGDVIWRMATALGQMVDPPRSAPQMLHVFGRALREAEPGDEFGATDSWPDFAS
Ga0209818_12253251	3300027637	Agricultural Soil	MEQPDLEVLDAVLSLTLAIAAGDDEAVEVLLRGHDPADLAVAGGRVIWRMATALGQMVEPNRSAPQMVHVFAQAMRADEGGLSG
Ga0209810_10865541	3300027773	Surface Soil	SELLDAVLSLALAAGNGDDEAVEVFLRSAEPADLAVTGAHVIWRMAAALGRMVQPERSAPQMIHVFAQALKEQG
Ga0209488_102655822	3300027903	Vadose Zone Soil	MDDSDLELTDAVLSMAIAAGTGDEEALELFLRASDPAHLAVAGADVIWRMATALGQMVDPPRSPPQMIHVFAQALRQPGGEFGDAGSS
Ga0209382_122292112	3300027909	Populus Rhizosphere	PDPDVLDAVLSLSIAVAAGDEGAIDVFLRSHSAEDLAIAGGHIIWRMATALGQLVEPTRSPPQMIHVFAQALREASELHGGGEET
Ga0137415_111137132	3300028536	Vadose Zone Soil	MDDSDLELTDAVLSMAIAAGTGDEEALELFLRASDPAHLAVAGADVIWRMATALGQMVDPPRSPPQMIHVFAQALRQPGDEFGDAGSS
Ga0299907_102347881	3300030006	Soil	MEQDPDVIDAVLSLTLAVAAGDDEATEVLLRDHDAADLAIAGGNVIWRMAAALGQMVEPTRSPPQMIHVFAQALREPDQGLGAADS
Ga0299913_102582363	3300031229	Soil	MEQPDPEVVDAALSMTLAVAAGDDEAVEFLLRSHDPADLAMAGSHLIWRMAAALGQMVEPKRSPPQMIHVFSQALRQPDDVGDMSG
Ga0299913_112872341	3300031229	Soil	MEQPDRDVLDAVLSLSLAVAAGDDEAVDVFFRSHDPADLAVAGGHVIWRMATALGQLVDPKRSPPQMIHVFAQTLHDPAGGFGDAGP
Ga0307469_108870471	3300031720	Hardwood Forest Soil	LSMALAAGSGDDEALEVFLRANDPAALAVAGADVIWQMATALGRLVNPPRSAPQMIHVFAQARRDPGGADEAAGEA
Ga0307469_117559471	3300031720	Hardwood Forest Soil	SLSIAVAAGDDEAVELILRSHDPADVAVAGGHVIWRMAAALGQLVEPQRSPPQMIHVFAQALREPGADLGAPDSSGKG
Ga0307469_122790321	3300031720	Hardwood Forest Soil	MGVMDYSDPELLDTVLSLAIAVGNGDEEAIEVFLRASDPADLAVVGADVIWRMATALGQMVAPPRSPPQMLHVFAQALRDGGDDFGGPGPS
Ga0307468_1017267592	3300031740	Hardwood Forest Soil	LESLDAVLSLALAIAAGDEEAIEIFLRANEPASLAIAGADVIWRMAGALGQLVEPRRSAPQMIHVFAQALRDSDAGN
Ga0307473_103083592	3300031820	Hardwood Forest Soil	MDRSDLEVLDTVLSLAIAAGAGDDEAVELLLRGSDPADLALAGADVIWRMAAALGQLVEPRRSPPQMIHVFAQALRDADAS
Ga0307412_107761492	3300031911	Rhizosphere	MEPSELEAVEAVLSLTLAIAAGDDEAVEVLLRGHDPAGLAIAGGQVIWRMASALGQMVEPNRSAPQMVHVFAQAMRADEGGLSG
Ga0307416_1007223631	3300032002	Rhizosphere	MEQPDPDVLDAVLSLSIAVAAGDEGAIDVFLRSHSAEDLALAGGHIIWRMATALGQLVEPSRSPPQMIHVFAQALREAAEGPVDFE
Ga0307471_1000492573	3300032180	Hardwood Forest Soil	VLTSEGGKYGGMDNPDPEALDAVLSMALATGSGDDEALEVFLRANDPAALAVAGADVIWQMATALGRLVNPPRSAPQMIHVFAQARRDPGGADEAAGEA
Ga0307471_1035944431	3300032180	Hardwood Forest Soil	MEQPDPDVVDAVLSLTLAVAAGDDEAIEFLLRSHDPADLIVAGSEVIWQMATALGQMVEPKRSPPQMIHVFSQAL
Ga0372943_0016999_875_1150	3300034268	Soil	MAHMDQPDPEQVDAVLSLAIAAGAGDEEAVEVFLRTFEPADLAVTAAGIIWRMATALGRMVDPPRSAPQMLHVFAQAMRETGDEFGGAGSP
Ga0372943_0933735_236_493	3300034268	Soil	MDERDPELVDTVLSLAIAAGAGDDEAVEVFLRASDPAELAVAGAEVIWRMATALGQMVDPPRSAPQMLHVFGQALRDSDDGLGPI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102869

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences