Metagenome Family F102871

Basic Information
Family ID	F102871
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	60 residues
Representative Sequence	MSRLRGSEYYHRRADELRLAASAARSSANRDTLLSFAAEFDGLADEAECAEQARPEKAAAC
Number of Associated Samples	42
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	75.25 %
% of genes near scaffold ends (potentially truncated)	36.63 %
% of genes from short scaffolds (< 2000 bps)	92.08 %
Associated GOLD sequencing projects	36
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Most Common Taxonomy
Group	Unclassified (64.356 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (83.168 % of family members)
Environment Ontology (ENVO)	Unclassified (84.158 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (84.158 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.06% β-sheet: 0.00% Coil/Unstructured: 44.94%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.1: Ferritin	d1j30a_	1j30	0.89134
a.25.1.1: Ferritin	d1lkoa1	1lko	0.89065
a.25.1.1: Ferritin	d2fzfa1	2fzf	0.89065
a.25.1.1: Ferritin	d6txia_	6txi	0.89046
a.25.1.2: Ribonucleotide reductase-like	d3n20b_	3n20	0.8862

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00027	cNMP_binding	15.84
PF13545	HTH_Crp_2	10.89
PF00072	Response_reg	2.97
PF00486	Trans_reg_C	0.99
PF03328	HpcH_HpaI	0.99
PF04226	Transgly_assoc	0.99
PF04392	ABC_sub_bind	0.99
PF01609	DDE_Tnp_1	0.99
PF02371	Transposase_20	0.99
PF08388	GIIM	0.99
PF10604	Polyketide_cyc2	0.99
PF11937	DUF3455	0.99
PF08352	oligo_HPY	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.99
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.99
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.99
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.99
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.99
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.99
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.99
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.99
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.99
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.99
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.99
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
All Organisms	root	All Organisms	35.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
cellular organisms	root	All Organisms → cellular organisms	35.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	34.65 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.70 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	28.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.99 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	16.83 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.98 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.99 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.98 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.99 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.99 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas	1.98 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.99 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.99 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Panarthropoda	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda	0.99 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Arthropoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda	0.99 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Mandibulata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata	0.99 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Pancrustacea	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea	0.99 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Crustacea	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea	0.99 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Oligostraca	superclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca	0.99 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Ostracoda	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda	0.99 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Podocopa	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa	0.99 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Podocopida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa → Podocopida	0.99 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Cypridocopina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa → Podocopida → Cypridocopina	0.99 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Cypridoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa → Podocopida → Cypridocopina → Cypridoidea	0.99 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Cyprididae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa → Podocopida → Cypridocopina → Cypridoidea → Cyprididae	0.99 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Cyprideis	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa → Podocopida → Cypridocopina → Cypridoidea → Cyprididae → Cyprideis	0.99 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	64.36 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	16.83 %
Rhodopseudomonas palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1.98 %
Cyprideis torosa	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa → Podocopida → Cypridocopina → Cypridoidea → Cyprididae → Cyprideis → Cyprideis torosa	0.99 %
Nocardioides sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	0.99 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005176\|Ga0066679_10151569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1452	Open in IMG/M
3300005446\|Ga0066686_10372272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	975	Open in IMG/M
3300005538\|Ga0070731_10496033	Not Available	813	Open in IMG/M
3300005538\|Ga0070731_10889520	Not Available	590	Open in IMG/M
3300005542\|Ga0070732_10352971	Not Available	885	Open in IMG/M
3300005542\|Ga0070732_10396743	Not Available	832	Open in IMG/M
3300006800\|Ga0066660_10705081	Not Available	828	Open in IMG/M
3300009012\|Ga0066710_100920922	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Panarthropoda → Arthropoda → Mandibulata → Pancrustacea → Crustacea → Oligostraca → Ostracoda → Podocopa → Podocopida → Cypridocopina → Cypridoidea → Cyprididae → Cyprideis → Cyprideis torosa	1346	Open in IMG/M
3300009012\|Ga0066710_101305577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1125	Open in IMG/M
3300009012\|Ga0066710_101908139	Not Available	889	Open in IMG/M
3300009038\|Ga0099829_10200598	Not Available	1614	Open in IMG/M
3300009038\|Ga0099829_10369229	Not Available	1183	Open in IMG/M
3300009038\|Ga0099829_10415137	Not Available	1113	Open in IMG/M
3300009088\|Ga0099830_10189508	Not Available	1604	Open in IMG/M
3300009088\|Ga0099830_10422580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1080	Open in IMG/M
3300009088\|Ga0099830_10460464	Not Available	1034	Open in IMG/M
3300009088\|Ga0099830_10526671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	966	Open in IMG/M
3300009088\|Ga0099830_11192842	Not Available	632	Open in IMG/M
3300009088\|Ga0099830_11288522	Not Available	607	Open in IMG/M
3300009088\|Ga0099830_11417294	Not Available	578	Open in IMG/M
3300009089\|Ga0099828_10172240	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1923	Open in IMG/M
3300009089\|Ga0099828_10679229	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300009090\|Ga0099827_10122413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2097	Open in IMG/M
3300009090\|Ga0099827_10519002	Not Available	1024	Open in IMG/M
3300009090\|Ga0099827_10690709	Not Available	882	Open in IMG/M
3300009090\|Ga0099827_10708826	Not Available	870	Open in IMG/M
3300009090\|Ga0099827_11097535	Not Available	691	Open in IMG/M
3300009090\|Ga0099827_11256112	Not Available	644	Open in IMG/M
3300009137\|Ga0066709_101095987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1170	Open in IMG/M
3300011269\|Ga0137392_10045016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	3292	Open in IMG/M
3300011269\|Ga0137392_10181069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1716	Open in IMG/M
3300011269\|Ga0137392_10447742	Not Available	1072	Open in IMG/M
3300011269\|Ga0137392_11487943	Not Available	536	Open in IMG/M
3300011269\|Ga0137392_11524237	Not Available	527	Open in IMG/M
3300011270\|Ga0137391_10331864	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300011270\|Ga0137391_10786276	Not Available	785	Open in IMG/M
3300011270\|Ga0137391_10958038	Not Available	698	Open in IMG/M
3300011270\|Ga0137391_11126292	Not Available	633	Open in IMG/M
3300011270\|Ga0137391_11555902	Not Available	505	Open in IMG/M
3300011271\|Ga0137393_10184562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1755	Open in IMG/M
3300011271\|Ga0137393_10342336	Not Available	1277	Open in IMG/M
3300011271\|Ga0137393_10357584	Not Available	1248	Open in IMG/M
3300011271\|Ga0137393_10652891	Not Available	902	Open in IMG/M
3300011271\|Ga0137393_10795006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	809	Open in IMG/M
3300011271\|Ga0137393_10990467	Not Available	716	Open in IMG/M
3300011271\|Ga0137393_11204324	Not Available	643	Open in IMG/M
3300012096\|Ga0137389_10045109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3297	Open in IMG/M
3300012096\|Ga0137389_10356987	Not Available	1244	Open in IMG/M
3300012096\|Ga0137389_10415373	Not Available	1149	Open in IMG/M
3300012096\|Ga0137389_10487732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1057	Open in IMG/M
3300012096\|Ga0137389_10869887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	774	Open in IMG/M
3300012096\|Ga0137389_11816582	Not Available	505	Open in IMG/M
3300012189\|Ga0137388_10205331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1777	Open in IMG/M
3300012189\|Ga0137388_10707563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	935	Open in IMG/M
3300012189\|Ga0137388_11104967	Not Available	729	Open in IMG/M
3300012189\|Ga0137388_11162431	Not Available	709	Open in IMG/M
3300012199\|Ga0137383_10877126	Not Available	655	Open in IMG/M
3300012206\|Ga0137380_10158570	Not Available	2063	Open in IMG/M
3300012206\|Ga0137380_10266240	All Organisms → cellular organisms → Bacteria	1542	Open in IMG/M
3300012206\|Ga0137380_11365113	Not Available	593	Open in IMG/M
3300012207\|Ga0137381_10274274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1467	Open in IMG/M
3300012207\|Ga0137381_11104301	Not Available	682	Open in IMG/M
3300012209\|Ga0137379_10089988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2952	Open in IMG/M
3300012209\|Ga0137379_10224007	All Organisms → cellular organisms → Bacteria	1795	Open in IMG/M
3300012209\|Ga0137379_10533829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1081	Open in IMG/M
3300012209\|Ga0137379_10724827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	900	Open in IMG/M
3300012209\|Ga0137379_10901275	Not Available	789	Open in IMG/M
3300012210\|Ga0137378_10176838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1984	Open in IMG/M
3300012210\|Ga0137378_11220688	Not Available	668	Open in IMG/M
3300012210\|Ga0137378_11691759	Not Available	539	Open in IMG/M
3300012211\|Ga0137377_10642496	Not Available	997	Open in IMG/M
3300012211\|Ga0137377_11647507	Not Available	564	Open in IMG/M
3300012285\|Ga0137370_10557555	Not Available	705	Open in IMG/M
3300012349\|Ga0137387_10595218	Not Available	802	Open in IMG/M
3300012349\|Ga0137387_11303622	Not Available	508	Open in IMG/M
3300012351\|Ga0137386_10346688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1069	Open in IMG/M
3300012351\|Ga0137386_10743147	Not Available	705	Open in IMG/M
3300012357\|Ga0137384_11539473	Not Available	514	Open in IMG/M
3300012361\|Ga0137360_11213281	Not Available	652	Open in IMG/M
3300012362\|Ga0137361_10999046	Not Available	756	Open in IMG/M
3300012363\|Ga0137390_10307202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1568	Open in IMG/M
3300012363\|Ga0137390_10399361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	1353	Open in IMG/M
3300012363\|Ga0137390_10981418	Not Available	797	Open in IMG/M
3300012363\|Ga0137390_11182928	Not Available	712	Open in IMG/M
3300012917\|Ga0137395_10397494	Not Available	986	Open in IMG/M
3300021086\|Ga0179596_10516759	Not Available	606	Open in IMG/M
3300021171\|Ga0210405_11230221	Not Available	553	Open in IMG/M
3300025931\|Ga0207644_11714452	Not Available	526	Open in IMG/M
3300026551\|Ga0209648_10510848	Not Available	690	Open in IMG/M
3300027842\|Ga0209580_10445906	Not Available	645	Open in IMG/M
3300027846\|Ga0209180_10030946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2882	Open in IMG/M
3300027862\|Ga0209701_10070632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris	2210	Open in IMG/M
3300027862\|Ga0209701_10123640	Not Available	1600	Open in IMG/M
3300027862\|Ga0209701_10461868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp.	696	Open in IMG/M
3300027869\|Ga0209579_10260305	All Organisms → cellular organisms → Bacteria → Proteobacteria	932	Open in IMG/M
3300027875\|Ga0209283_10185201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1383	Open in IMG/M
3300027882\|Ga0209590_10144534	Not Available	1469	Open in IMG/M
3300027882\|Ga0209590_10310892	Not Available	1013	Open in IMG/M
3300027882\|Ga0209590_10353083	Not Available	947	Open in IMG/M
3300027903\|Ga0209488_10875852	Not Available	631	Open in IMG/M
3300031965\|Ga0326597_10029535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	6988	Open in IMG/M

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.01%
Host-Associated	Host-Associated	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.01%
Plants	Host-Associated → Plants	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.01%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	99.01%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	90.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	83.17%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066679_101515691	3300005176	Soil	MPRGSDYYHRRADKLRQAARDARSTANRDTLRSFAAYYDGRADEAECAEEAQPEKAAAC*
Ga0066686_103722721	3300005446	Soil	MSPLRDSEYYRKRAIELRLVADEPRSSGNRETLITFAAYFDQLADEAEGAEEEQLEKTAAC*
Ga0070731_104960332	3300005538	Surface Soil	MSLLQGSEYYHRRAGELREAAKESGSLDNRDTLLSFAADFDGLAEEAECAERAQAAAAP*
Ga0070731_108895202	3300005538	Surface Soil	MSPLRGSEYYHRRADELRRAARDAHSPDNRDTLHSFAAYFDGRADEADFVEQAQPEKAAPC*
Ga0070732_103529711	3300005542	Surface Soil	MSLHRGSEYYHRRADELREAAGEARSLDNRDTLLSFAAYFDGRADEAECAEQAEPEKAAAC*
Ga0070732_103967432	3300005542	Surface Soil	MSRARGSEYYHRRADELRLAAHDAHSSDNRDTLFSFAAYFDGRGDEAERAEQAGPEKAAAC*
Ga0066660_107050812	3300006800	Soil	MSVPRGSDYYHRRADELRQAASETRSSDNRDTLLSFAAYFDGRGDEAESAEQTHSENAASR*
Ga0066710_1009209224	3300009012	Grasslands Soil	MSRLQGSEYYHRRADELRLAAGAAHSSANRETLLSFAADFDGLADKAEDAEQAQPEKA
Ga0066710_1013055771	3300009012	Grasslands Soil	SDYYHRRADELRHAASDARSSDNRDTLLSFAAYFDGRGDEAESAEQTQSEKAAAC
Ga0066710_1019081392	3300009012	Grasslands Soil	MSQLRDSEYYHRRADEMRLAAVEARLADNRDTLRSFAVYFDRLADEAERAEKAQSEKAAA
Ga0099829_102005982	3300009038	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAARSSANRDTLLSFAADLDGLADEAECAGQGKPEKAAAC*
Ga0099829_103692291	3300009038	Vadose Zone Soil	MSQPQGSEYYHRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQARPEKVAAC*
Ga0099829_104151371	3300009038	Vadose Zone Soil	MSALRDSEYYRKRAVELRLAAGEPRSLDNRDTLLSFAAYFDVLADEAEDAEEAKLEKAAAC*
Ga0099830_101895081	3300009088	Vadose Zone Soil	GSKYYHRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQARPEKVAAC*
Ga0099830_104225803	3300009088	Vadose Zone Soil	MSQPQGSEYYHRRADELRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQARPEK
Ga0099830_104604641	3300009088	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAARSSANRDTLLSFAADLDGLADEAERAEQGKPEKAAAC*
Ga0099830_105266711	3300009088	Vadose Zone Soil	MSQPQGSEYYHRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQARPEK
Ga0099830_111928422	3300009088	Vadose Zone Soil	YYHRRADELRLAASAARSSANRDTLLSFAAEFDGLADEAECAEQARPEKAAAC*
Ga0099830_112885221	3300009088	Vadose Zone Soil	GKDVAMSQLRDSKYYHRRADEMRLAAIEARLADNRDTLRSFAVYFDRLADEAERAEQAQSEKAAAC*
Ga0099830_114172941	3300009088	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAAHSSANRETLLSFAADFDGLADKAEGAEQAHPEKTAAC*
Ga0099828_101722402	3300009089	Vadose Zone Soil	MSRLQGSEYYHRRADELRLAASAARSSANRDTLLSFAADLDGLADEAECAEQGKPEKAAAC*
Ga0099828_106792292	3300009089	Vadose Zone Soil	MSQLHGSEYYHRRADEMRLASVETRSSDNRDTLRSFAVYFDRLADEAERAEQAPSEKAVAC*
Ga0099827_101224132	3300009090	Vadose Zone Soil	MSSLRGSDYYHRRADELRLAAGEVRSLANRDTLLSFAADFDRLGDEAECAEQAPSEEEPAH*
Ga0099827_105190021	3300009090	Vadose Zone Soil	MSQLRDSEYYHRRADEMRLAAVEARLADNRDTLRSFAVYFDRLADEAERAEQAQSEKAAAC*
Ga0099827_106907092	3300009090	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAALSSANRDTLLSFAADFDGLADKAEGAEQTRPEKTAAC*
Ga0099827_107088262	3300009090	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAARSSANRDTLLSFAADLDGLADEAECAEQGKPEKAAAC*
Ga0099827_110975351	3300009090	Vadose Zone Soil	MSQLCGSEYYHRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQSQPEKAAAC*
Ga0099827_112561121	3300009090	Vadose Zone Soil	LKNFFETGIAGKGVVMSRLQDSEYYHRRANELRLAAGAARSSANRDTLLSFAADLDGLADKAEGAEQGKPEKTAAC*
Ga0066709_1010959872	3300009137	Grasslands Soil	MSRLRGSKYYHKRADELRLAASAAHSSANRETLLSFATDFDGLADEAEGAEQTRPEKTAAC*
Ga0137392_100450163	3300011269	Vadose Zone Soil	MPQLPGSEYYHRRADEMRLAAIEARSSDNRDTLRSFAAYFDRLADEAERAEQAQPEKTAAC*
Ga0137392_101810694	3300011269	Vadose Zone Soil	EYYHRRADELRLAASAARSSANRDTLLSFAADLDGLADEAERAEQGKPEKAAAC*
Ga0137392_104477421	3300011269	Vadose Zone Soil	MSPLRGSNYYHRRAGELRLAAKEARSSVDRDTLLSFAADFDGLADEAECAEQAQPEKTTAR*
Ga0137392_114879431	3300011269	Vadose Zone Soil	MSQPQGSEYYHRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQ
Ga0137392_115242372	3300011269	Vadose Zone Soil	EYYHRRADELRLAASAARSSANRDTLLSFAADLDGLADEAECAGQGKPEKAAAC*
Ga0137391_103318641	3300011270	Vadose Zone Soil	MSQLHGSEYYHRRADEMRLAAIEALSSDNRDTLRSFAVYFDRLADEAERAEQAPSEKAVAC*
Ga0137391_107862761	3300011270	Vadose Zone Soil	MSALRDSEYYRKRAVELRLAASEPRSFDNRDTLLSFAAYFDVLADEAEDAEEAKLETTAAC*
Ga0137391_109580381	3300011270	Vadose Zone Soil	DVAMSQPRGSEYYHRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLGDEAERAEQVQSEKAAAC*
Ga0137391_111262921	3300011270	Vadose Zone Soil	MARLQGSEYYHRRADELRLAAGAARSSANRDTLLSFAADLDGLADQAECAEQGKPEKAAAC*
Ga0137391_115559021	3300011270	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAARSSANRDTLLSFAADLDGLGDEAECAEQGKPEKAAAC*
Ga0137393_101845623	3300011271	Vadose Zone Soil	MSRLRGSEYYHKHADELRLAASAARSSANRDTLLSFAADLDGLADEAECAGQGKPEKAAAC*
Ga0137393_103423362	3300011271	Vadose Zone Soil	RADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQARPEKVAAC*
Ga0137393_103575841	3300011271	Vadose Zone Soil	MSQPRGSEYYHRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQ
Ga0137393_106528912	3300011271	Vadose Zone Soil	RADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQVQSEKAAAC*
Ga0137393_107950062	3300011271	Vadose Zone Soil	MLAMSQPQGSEYYHQRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAER
Ga0137393_109904671	3300011271	Vadose Zone Soil	MSSLRGSEYYHRRADELRVAAGEAGSLANRDTLLSFAADFDGLADEAECTEQTRPQKAAAC*
Ga0137393_112043242	3300011271	Vadose Zone Soil	MSQLLGSEYYHRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAERTQPEKMTAC*
Ga0137389_100451096	3300012096	Vadose Zone Soil	MLAMSQPQGSEYYHQRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQARPEKVAAC*
Ga0137389_103569872	3300012096	Vadose Zone Soil	VKPKNFQPLRKDIAMSQLRGSEYYHRRADEMRLASVETRSSDNRDTLRSFAVYFDRLADEAERAEQTQPEKAAAC*
Ga0137389_104153732	3300012096	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAARSSANRDTLLSFAAEFDGLADEAECAEQARPEKAAAC*
Ga0137389_104877322	3300012096	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASSARSSANRDTLLSFAADLDGLADEAERAEQGKPEKAAAC*
Ga0137389_108698871	3300012096	Vadose Zone Soil	HRRAGELRLAAKEARSSVDRDTLLSFAADFDGLADEAECAEQAQPEKTTAR*
Ga0137389_118165821	3300012096	Vadose Zone Soil	MSQLHGSEYYHRRADEMRLAAIEALSSDNRDTLRSFAVYFDRLADEAERAEQARPEKVA
Ga0137388_102053312	3300012189	Vadose Zone Soil	MSQPQGSEYYHRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQAQSEKAAAC*
Ga0137388_107075631	3300012189	Vadose Zone Soil	YYHRRAGELRLAAREARSSANRDTLLSFAADFDGLADEAECAEQARPEKAAAC*
Ga0137388_111049671	3300012189	Vadose Zone Soil	EYYHQRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQARPEKVAAC*
Ga0137388_111624311	3300012189	Vadose Zone Soil	RGSEYYHRRADEMRLASVETRSSDNRDTLRSFAVYFDRLADEAERAEQTQPEKAAAC*
Ga0137383_108771262	3300012199	Vadose Zone Soil	MSSLRGSDYYHRRADELRLAAGEVRSLANRDTLLSFAADFDRLGDEAECAE
Ga0137380_101585705	3300012206	Vadose Zone Soil	EAAEPAFAGKGVVMSRLQGSQYYHRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQARPEKVAAC*
Ga0137380_102662401	3300012206	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAAHSSANRETLLSFATDFDGLADEAEGAEQTRPEKTATC*
Ga0137380_113651131	3300012206	Vadose Zone Soil	DRARARLKNFFETGIAGKGVVMSRLRGSEYYHRRADELRLAASAAHSSANRDTLLSFAADFDGLADKAEGAEQARPEKTAAC*
Ga0137381_102742743	3300012207	Vadose Zone Soil	RRNLPPASLTTERGPIKEFFETGIAGKGVVMSRLRGSEYYHRRADELRLAASAALSSANRDTLLSFAADFDGLADKAEGAEQARPEKTAAC*
Ga0137381_111043011	3300012207	Vadose Zone Soil	MSQLLGSEYYHRRADEMRLAAIEARSSDNPDTLRSFAVYFDRLADEAERAEQTRPEKVAAC*
Ga0137379_100899883	3300012209	Vadose Zone Soil	MSSIRGSEYYHRRADELRLAAGEAHSLANRDTLLSFAADFDRLGDEAECAEQAPSEEEPAH*
Ga0137379_102240072	3300012209	Vadose Zone Soil	VSPIKEFFETGFAGKGVVMSRLRGSEYYHRRADELRLAASAALSSANRDTLLSFAADFDGLADKAEGAEQTRPEKTAAC*
Ga0137379_105338293	3300012209	Vadose Zone Soil	MSQPQGSEYYHQRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQARPEKVAAC*
Ga0137379_107248272	3300012209	Vadose Zone Soil	GKGVVMSRLRGSEYYHRRADELRLAASAAHSSANRDTLLSFAADLDGLGDEAECAEQGKPEKAAAC*
Ga0137379_109012751	3300012209	Vadose Zone Soil	MSVLRGSDYYHRRAGELRVAARDVHSSANRDTLLSFAADFDGLADEAECAEQAQPQKAAAC*
Ga0137378_101768384	3300012210	Vadose Zone Soil	MSLLRGSDYYHRRADELRLAARDVRSPANRDTLRSFAADFDRLADEAECAEQ
Ga0137378_112206882	3300012210	Vadose Zone Soil	MAQLPDSEYYHRRADQMRLAAREARSSDNRDTLRSFAVYFDRLADEAERAEQVQSEKVAAC*
Ga0137378_116917591	3300012210	Vadose Zone Soil	MSRLRGSKYYHRRADELRLAASAALSSANRDTLLSFAADFDGLADKAEGAEQARPEKTAAC*
Ga0137377_106424962	3300012211	Vadose Zone Soil	MSVPRRSDYYHRRADELRHAASDARSSDNRDTLLSFAAYFDGRGDEAESAEQTQSEKAAAC*
Ga0137377_116475072	3300012211	Vadose Zone Soil	VVMSRLRGSKYYHRRADELRLAASEAHSSANRDTLLSFAADFDGLGDEAECAEQAQPEKGSAR*
Ga0137370_105575551	3300012285	Vadose Zone Soil	MSVPRGSDYYHRRADELRQAAIGTRSSDNRDILLSFAAYFDGRGDEAESAEEAHSEKAAAC*
Ga0137387_105952182	3300012349	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAALSSANRDTLLSFAADLDGLGDEAECAEQGKPEKAAAC*
Ga0137387_113036221	3300012349	Vadose Zone Soil	HRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQVQSEKVAAC*
Ga0137386_103466882	3300012351	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAALSSANRDTLLSFAADFDGLADKAEGAEQARPEKTAAC*
Ga0137386_107431472	3300012351	Vadose Zone Soil	MSQPQGSEYYHQRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERA
Ga0137384_115394731	3300012357	Vadose Zone Soil	MSSPRGSEYYHRRADELRLAASASRSLDNRDTLLSFAADFDRLADEAERGEEAQPEKSTAR*
Ga0137360_112132811	3300012361	Vadose Zone Soil	MSMPRGSDYYHRRADNLRQAARDARSSANRDTLRSFAADFDRLADEAELSEQGQPQKATAC*
Ga0137361_109990461	3300012362	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAAHSSANRETLLSFATDFDGLADEAEGAEEAHPEKTAAC*
Ga0137390_103072024	3300012363	Vadose Zone Soil	RLAASAARSSANRDTLLSFAADLDGLGDEAECAEQGKPEKAAAC*
Ga0137390_103993611	3300012363	Vadose Zone Soil	MSQLHGSEYYHRRADEMRLAAIEALSSDNRDTLRSFAVYFDRLADEAERAEQ
Ga0137390_109814182	3300012363	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAAGAARSSANRDTLLSFAADLDGLGEEAECAEQGKPEKAAAC*
Ga0137390_111829282	3300012363	Vadose Zone Soil	MSRLQGSEYYHRRADELRLAASAARSSANRDTLLSFAAEFDGLADEAECAEQARPEKAAAC*
Ga0137395_103974941	3300012917	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAAHSSANRDTLLSFAADFDGLADKAEGAEQAHPEKTAAC*
Ga0179596_105167591	3300021086	Vadose Zone Soil	MSQPQGSEYYHRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQARPEKVAA
Ga0210405_112302212	3300021171	Soil	MSLLQGSEYYHRRAGELRQAAGEARSADNRETLLSFAADFDGLAAEAECAERRQAEAAAP
Ga0207644_117144522	3300025931	Switchgrass Rhizosphere	MSALRGSEYYHRRAGELRLAASETRSSNNRDTLLSFAADFDELADKADGAEQTQLGKQAA
Ga0209648_105108482	3300026551	Grasslands Soil	MSALRDSEYYRKRAVELRLAAGEPRSLDNRDTLLSFAAYFDVLADEAEDAEEAKLETTAA
Ga0209580_104459062	3300027842	Surface Soil	MSRARGSEYYHRRADELRLAAHDAHSSDNRDTLFSFAAYFDGRGDEAERAEQAGPEKAAA
Ga0209180_100309465	3300027846	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAARSSANRDTLLSFAADLDGLADEAERAEQGKPEKAAA
Ga0209701_100706321	3300027862	Vadose Zone Soil	MSQLHGSEYYHRRADEMRLAAIEALSSDNRDTLRSFAVYFDRLADEAERAEQAPSE
Ga0209701_101236401	3300027862	Vadose Zone Soil	SKYYHRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQARPEKVAAC
Ga0209701_104618682	3300027862	Vadose Zone Soil	MPQLPGSEYYHRRADEMRLAAIEARSSDNRDTLRSFAAYFDRLADEAERAEQAQPEKTAA
Ga0209579_102603052	3300027869	Surface Soil	MSLLQGSEYYHRRAGELREAAKESGSLDNRDTLLSFAADFDGLAEEAECAERAQAAAAP
Ga0209283_101852011	3300027875	Vadose Zone Soil	LRGSEYYHRRADELRLAASAARSSANRDTLLSFAADLDGLADEAECAEQGKPEKAAAC
Ga0209590_101445342	3300027882	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAARSSANRDTLLSFAADLDGLADEAECAEQGKPEKAAA
Ga0209590_103108922	3300027882	Vadose Zone Soil	MSRLRGSEYYHRRADELRLAASAALSSANRDTLLSFAADFDGLADKAEGAEQTRPEKTAA
Ga0209590_103530831	3300027882	Vadose Zone Soil	MSSLRGSDYYHRRADELRLAAGEVRSLANRDTLLSFAADFDRLGDEAECAEQAPSEEEPA
Ga0209488_108758522	3300027903	Vadose Zone Soil	YFVMSQPQGSEYYHRRADEMRLAAIEARSSDNRDTLRSFAVYFDRLADEAERAEQTQPEKAAAC
Ga0326597_100295354	3300031965	Soil	MSPLRNSEYYRRRADELRAAAGESRSADNRDTLLYFAADFERLADEANGAEQMKFAKQAA

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F102871

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M

Hidden Markov Model


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