Metagenome / Metatranscriptome Family F102872

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102872
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	159 residues
Representative Sequence	MDRQSLVSKLLLGVAALVVALPLFWLAGGVRWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGWWFGCDLAPSGTANYCRLVMANGEEVYAGEYLPCESKVPLTVSTKEFAPPPHNVEMWIADKRLAKLAPVGALKTGDLLLPVDVLDRCDKFKQSGH
Number of Associated Samples	89
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	20.79 %
% of genes near scaffold ends (potentially truncated)	44.55 %
% of genes from short scaffolds (< 2000 bps)	74.26 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.812 % of family members)
Environment Ontology (ENVO)	Unclassified (31.683 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.455 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 19.15% β-sheet: 21.28% Coil/Unstructured: 59.57%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF08546	ApbA_C	2.97
PF05649	Peptidase_M13_N	2.97
PF08238	Sel1	1.98
PF00589	Phage_integrase	1.98
PF12867	DinB_2	1.98
PF01925	TauE	0.99
PF01882	DUF58	0.99
PF03462	PCRF	0.99
PF11008	DUF2846	0.99
PF00682	HMGL-like	0.99
PF12680	SnoaL_2	0.99
PF04075	F420H2_quin_red	0.99
PF00793	DAHP_synth_1	0.99
PF01475	FUR	0.99
PF03572	Peptidase_S41	0.99
PF01402	RHH_1	0.99
PF05163	DinB	0.99
PF01740	STAS	0.99
PF01850	PIN	0.99
PF00144	Beta-lactamase	0.99
PF10091	Glycoamylase	0.99
PF00248	Aldo_ket_red	0.99
PF03477	ATP-cone	0.99
PF13563	2_5_RNA_ligase2	0.99
PF13181	TPR_8	0.99
PF13751	DDE_Tnp_1_6	0.99
PF09286	Pro-kuma_activ	0.99
PF01872	RibD_C	0.99
PF00069	Pkinase	0.99
PF04185	Phosphoesterase	0.99
PF01841	Transglut_core	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.96
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	2.97
COG3590	Predicted metalloendopeptidase	Posttranslational modification, protein turnover, chaperones [O]	2.97
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.99
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.99
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.99
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.99
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.99
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.99
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.99
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.99
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	0.99
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.99
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.99
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.99
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.99
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	82.18 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.97 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	66.34 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.99 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.34 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.90 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	0.99 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.34 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.90 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.99 %
Thiotrichaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.34 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	3.96 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.99 %
Herbaspirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum	0.99 %
Thiothrix	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.34 %
Granulicella tundricola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	3.96 %
Thiothrix caldifontis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix → Thiothrix caldifontis	0.99 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.99 %
unclassified Herbaspirillum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum	0.99 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	66.34 %
Granulicella tundricola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	3.96 %
Herbaspirillum sp. B65	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. B65	0.99 %
Thiothrix caldifontis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix → Thiothrix caldifontis	0.99 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.99 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101007195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	612	Open in IMG/M
3300001546\|JGI12659J15293_10004673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4040	Open in IMG/M
3300001686\|C688J18823_10276608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1109	Open in IMG/M
3300004114\|Ga0062593_100331940	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300004479\|Ga0062595_100109490	All Organisms → cellular organisms → Bacteria	1495	Open in IMG/M
3300004643\|Ga0062591_101205491	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	737	Open in IMG/M
3300005181\|Ga0066678_11069776	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	520	Open in IMG/M
3300005332\|Ga0066388_100008271	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7767	Open in IMG/M
3300005332\|Ga0066388_102415722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	954	Open in IMG/M
3300005338\|Ga0068868_101111359	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300005355\|Ga0070671_101139579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300005454\|Ga0066687_10001745	All Organisms → cellular organisms → Bacteria	6638	Open in IMG/M
3300005456\|Ga0070678_101934723	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Herbaspirillum → unclassified Herbaspirillum → Herbaspirillum sp. B65	557	Open in IMG/M
3300005529\|Ga0070741_10004362	All Organisms → cellular organisms → Bacteria	33105	Open in IMG/M
3300005533\|Ga0070734_10179051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1225	Open in IMG/M
3300005533\|Ga0070734_10233763	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300005538\|Ga0070731_10118448	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300005575\|Ga0066702_10235539	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300005764\|Ga0066903_104042995	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300005921\|Ga0070766_10137632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1483	Open in IMG/M
3300006050\|Ga0075028_100058269	All Organisms → cellular organisms → Bacteria	1877	Open in IMG/M
3300006050\|Ga0075028_100475344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	726	Open in IMG/M
3300006800\|Ga0066660_10512618	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300009038\|Ga0099829_10213880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1564	Open in IMG/M
3300009088\|Ga0099830_11317034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300009174\|Ga0105241_11562531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300009176\|Ga0105242_10282036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1509	Open in IMG/M
3300009553\|Ga0105249_13002526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300010043\|Ga0126380_10627723	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300010343\|Ga0074044_10236213	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1209	Open in IMG/M
3300010359\|Ga0126376_12767928	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	540	Open in IMG/M
3300010376\|Ga0126381_100355140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2028	Open in IMG/M
3300010397\|Ga0134124_10293238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1513	Open in IMG/M
3300010937\|Ga0137776_1537822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1087	Open in IMG/M
3300011270\|Ga0137391_11538451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300012096\|Ga0137389_10890275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300012201\|Ga0137365_10160925	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300012210\|Ga0137378_10542079	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1072	Open in IMG/M
3300012350\|Ga0137372_10205328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1574	Open in IMG/M
3300012353\|Ga0137367_10300852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1148	Open in IMG/M
3300012354\|Ga0137366_10502754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300012354\|Ga0137366_10930043	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300012469\|Ga0150984_104605367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300012925\|Ga0137419_11319015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300013102\|Ga0157371_10713333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300013105\|Ga0157369_11592725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300013296\|Ga0157374_10796855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300013307\|Ga0157372_10086373	All Organisms → cellular organisms → Bacteria → Acidobacteria	3559	Open in IMG/M
3300014201\|Ga0181537_10012852	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6132	Open in IMG/M
3300014498\|Ga0182019_10087020	All Organisms → cellular organisms → Bacteria → Acidobacteria	1888	Open in IMG/M
3300014501\|Ga0182024_10000433	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	107528	Open in IMG/M
3300014654\|Ga0181525_10310227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	862	Open in IMG/M
3300015241\|Ga0137418_10097221	All Organisms → cellular organisms → Bacteria	2652	Open in IMG/M
3300015371\|Ga0132258_10301109	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3943	Open in IMG/M
3300015371\|Ga0132258_10351137	All Organisms → cellular organisms → Bacteria → Acidobacteria	3647	Open in IMG/M
3300015373\|Ga0132257_100195273	All Organisms → cellular organisms → Bacteria → Proteobacteria	2395	Open in IMG/M
3300016294\|Ga0182041_10694052	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300016294\|Ga0182041_11397354	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300018431\|Ga0066655_10743121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300020580\|Ga0210403_10508108	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300020581\|Ga0210399_10009642	All Organisms → cellular organisms → Bacteria → Acidobacteria	7548	Open in IMG/M
3300020583\|Ga0210401_10009720	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9445	Open in IMG/M
3300020583\|Ga0210401_10128917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2371	Open in IMG/M
3300020583\|Ga0210401_10293703	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300020583\|Ga0210401_10674428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300021088\|Ga0210404_10620237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300021170\|Ga0210400_10112558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2165	Open in IMG/M
3300021180\|Ga0210396_10318797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiotrichaceae → Thiothrix → Thiothrix caldifontis	1374	Open in IMG/M
3300021180\|Ga0210396_10728482	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300021181\|Ga0210388_10079341	All Organisms → cellular organisms → Bacteria → Acidobacteria	2783	Open in IMG/M
3300021403\|Ga0210397_10460256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	959	Open in IMG/M
3300021404\|Ga0210389_10000826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	26235	Open in IMG/M
3300021432\|Ga0210384_11044251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300021474\|Ga0210390_10933381	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300021477\|Ga0210398_10318596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1268	Open in IMG/M
3300021559\|Ga0210409_11687340	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → Granulicella tundricola	510	Open in IMG/M
3300021560\|Ga0126371_10056079	All Organisms → cellular organisms → Bacteria	3785	Open in IMG/M
3300021560\|Ga0126371_13929001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300023101\|Ga0224557_1199192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300023259\|Ga0224551_1001481	All Organisms → cellular organisms → Bacteria	3974	Open in IMG/M
3300025919\|Ga0207657_10288396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1302	Open in IMG/M
3300025934\|Ga0207686_10145714	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1642	Open in IMG/M
3300026088\|Ga0207641_12350700	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300026527\|Ga0209059_1145772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300027546\|Ga0208984_1120154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300027826\|Ga0209060_10537641	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300027846\|Ga0209180_10724116	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300027895\|Ga0209624_10000106	All Organisms → cellular organisms → Bacteria	78678	Open in IMG/M
3300028800\|Ga0265338_10123909	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2055	Open in IMG/M
3300029636\|Ga0222749_10025921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2456	Open in IMG/M
3300030991\|Ga0073994_11041584	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300031236\|Ga0302324_100183674	All Organisms → cellular organisms → Bacteria → Acidobacteria	3366	Open in IMG/M
3300031241\|Ga0265325_10427297	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300031712\|Ga0265342_10301007	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300031820\|Ga0307473_11039323	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300032076\|Ga0306924_12390705	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300032805\|Ga0335078_10000187	All Organisms → cellular organisms → Bacteria	102391	Open in IMG/M
3300032805\|Ga0335078_12620252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300032828\|Ga0335080_10599589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1158	Open in IMG/M
3300032892\|Ga0335081_12171326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300032893\|Ga0335069_10190651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	80.20%
Host-Associated	Host-Associated	19.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.25%
Plants	Host-Associated → Plants	19.80%
Aquatic	Environmental → Aquatic	4.95%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.28%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.94%
Peat	Environmental → Terrestrial → Peat	2.97%
Freshwater	Environmental → Aquatic → Freshwater	1.98%
Sediment	Environmental → Aquatic → Sediment	1.98%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.92%
Loam	Environmental → Terrestrial → Soil → Loam	7.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.94%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.97%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.98%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.99%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.97%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.98%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.98%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.94%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.95%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.98%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.99%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.99%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023101	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 10-14	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1010071951	3300000364	Soil	MDRQDLLLNFILVLLALLVLPPLFWMAGGVRWLDTKVFPARRPKDMPQNSVWIEAPTLPISWHHGWWFGCDLAQSGAANYCRLVMANGREVYAGEYLPCGSKTPLPVSTRDLVTPPHSDAIWIADKRLNTLAPVGALRN
JGI12659J15293_100046733	3300001546	Forest Soil	MHRHGLFSKLLLGVAALVVALPLFWLAGGINWLDTKVFPPRRPKDMPQNAVWLDAPALPISWHHGWWFGCDLAPSGTANYCRLVTANGAEVYAGEYLPCESKVPLPVSTKELAPPHNVEMWISDKRLKTLAPVGALENGDLLLPVEVLDRCDKFKQSGH*
C688J18823_102766082	3300001686	Soil	MNRRDLLIRLLVGLVVAVMALPLFWMLGGIRWLDTQVFPPRRPKNMPQNAVWIDAPALPISWHHGWWFGCDTPSSSTANYCRLVMANGEEVYAGGYLPCDSRSPLPMSKIDLVPPPEKVGMWIVDKRLTRLVPIGALRDGDLLLPVVVLDRCDELKGAHSTN*
Ga0062593_1003319402	3300004114	Soil	MAMDRQSLVSRLLLGVGALVVAFPLFWLAGGVRWLETKVFPPRRPKDMPENAVWIDAPGLPISWHHGWWFGCDLASSGKANYCRLVMANGEEVYAGEYLPCETKVPLMVSTEELAPPPHNVEMWIADKRLAQLAPVGALKSGDLLLPVDVLDRCDKFKQSGH*
Ga0062595_1001094902	3300004479	Soil	MERPSRLSSVLLAFAALCVALLVALPLFWASGGITWLDTKVFPPRRPKGMAPNSVWIDAPPAPISWHHGWWFGCELAQSGTANYCRFVKANGEQVYAGEYLPCGSKIPFPISTQELVPPPRNEAIWIGDDRLKGLVPVGVLRNGDLLLPVVVLYRCDTFKQSRH*
Ga0062591_1012054911	3300004643	Soil	MAMDRQSLVSRLLLGVGALVVAFPLFWLAGGVRWLETKVFPPRRPKDMPENAVWIDAPGLPISWHHGWWFGCDLASSGKANYCRLVMANGEEVYAGEYLPCESKVPLTVSTKELAPPPHNVEMWIADKRLAKLAPVGALKSGDLLLPVDVLDRCDKFKQS
Ga0066678_110697761	3300005181	Soil	MAITRQNLMVNLLIAFAAVVVALPFFWLFGGIRWLDTRAFPPRRPKNMPQNAIWIDAPALPISWHHGWWFGCSAPSSGTTNQCRLVMSNGDEVYAGNYLPCGSKSVLPLSQIDLVPPPHSVGMWIADNRLTTLAPIGALRNGDLLI
Ga0066388_1000082711	3300005332	Tropical Forest Soil	KLVNLLLAFSAIVIALPFFWLFGGVRWLETRVFPPQRPKEMPQNAIWIDAPALPISWHHGWWFGCLMSSSGIANECRLVMPNGDEVYAGEYLPCSSKSQLLSSEIELVPPPQKVGMWVADKRLTTLAPIGALRNGDLLLPAVVIDRCDELKGMPQAN*
Ga0066388_1024157222	3300005332	Tropical Forest Soil	VDRTGLASKVLLGLAVIAAALPIFWFAGGIRWLDTKVFPPRRPKDMPQNAVWIDAPALTISWHHGWWFGCDVAHSGDANRCRLVMANDQEVYAGEYLPCQTKTPLPVSTNELTAPPHSGAIWIADRRLGKLAPVGVLRNGDLLLPVAVLDRCEEFKRTGC*
Ga0068868_1011113591	3300005338	Miscanthus Rhizosphere	ALLVALPLFWVSGGITWLDTKVFPPRRPRGMPPNSVWIDAPSLPISWHHGWWFGCELTPSGTANYCRFVKANGEQVYAGEYLPCATKIPLPISTQELVPPPRNEAIWIGDERLKGLVPVGVLRNGDLLLPVVVLNRCDTFKQSGH*
Ga0070671_1011395791	3300005355	Switchgrass Rhizosphere	MDRQNLVLNLFLGVAVLVVSLPLFWLAGGIGWLDTKVFPPRRPEAMPQNAVWIAGPTLPISWHHGAWFGCTVAPSGTANYCRLVLANGKEVYAGEYLPCESKVPLAISTKELAPPPPNVGMWILDKRLARLAPVGALKSGDLILPVDVLDRCDKFKQSGQ*
Ga0066687_100017454	3300005454	Soil	VNRRDFLIRLLFGLVVVVMALPLFWLLGGIRWLDTQVFPPRRPKNMPQNAVWIDAPALPISWHHGWWFGCDTLSAGTTNYCRLVMANGHEVYAGRYLPCEGRSPVPTSKIDLVAPPDKIGMWIVDKRLSEMAPIGALRNGDLLLPVVVLDRCDELKGTHRSD*
Ga0070678_1019347231	3300005456	Miscanthus Rhizosphere	MERPSRLSSVLLAFAALCVALLVALPLFWASGGITWLDTKVFPPRRPKGMPPNSVWIDAPPAPISWHHGWWFGCELAQSGTANYCRFVKANGEQVYAGEYLPCGSKIPFPISTQELVPPPRNEAIWIGDDRLKGLVPVGVLRNGDLLLPVVVLYRCDTFKQSRH*
Ga0070741_100043628	3300005529	Surface Soil	MNRQSLVVRLLFGFAALVVALPLFWLAGGIHWLDTKVFPPQRPKNMPENAVWIDAPALPISWHHGWWFGCDLASSGATNYCRLVMANGKEVYAGEYLPCGSKAPLPVSTMALAPPRDMWIADERLSTLAPVGALKNGDLMLPVAILDRCETLKETKR*
Ga0070734_101790512	3300005533	Surface Soil	MSLFSKIFLALVTFVVAVPLFWFGGGIRWLETKVFPPQRPKNMPQNAIWIDAPALPISWHHGWWFGCDTPSSGRANYCRLVMTNGSDVYAGEYLPCENGSPVAMSKIDLVPPPDQVGMWITDKRLKESAPIGALRKGDLLVPVAVLDRCDELKAKGRAN*
Ga0070734_102337632	3300005533	Surface Soil	MTRSTLFSKVLVALIALVVALPLFWFAGGIRWLDTKVFPPRRPKDMPPNAVWIDAPALPISWHHGWWFGCDAPLSGTANHCRLVTANGGEVYAGEYLPCEDRSPVGMSKIDLVPPHDQVGMWIADKRLRELAPIGALRKGDLLLPVAVLDRCDELKAKRRVN*
Ga0070731_101184483	3300005538	Surface Soil	VECHRIAMDRQSLASKLLLGVAAIVVALPLFWVAGGVSWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHRGWWFGCDLASSGTAYYCRLVMANGDEVYAGEYLPCESKVPLTVSTKELAPPPHNVEMWISDKRLAKLAPVGALKSGDLLLPVDVLDRCDKFKQGGH*
Ga0066702_102355391	3300005575	Soil	MDRQSLISKLLLGVAALVLAFVLFWLAGGVRWLDTQVFPPRRPKDMPQNAVWIDAPGLPISWHHGWWFGCDLAASGTANYCRLLMANGEEVYAGVYLPCESKVPLTVSTKELAPPPHNVAMWIADKRLAKLAPVGALKSGDVLLPVDVLDRCDQFKQNGHYGH*
Ga0066903_1040429952	3300005764	Tropical Forest Soil	MDRQDIALRLLLGVLIVLVVPPLFWMAGGVTWLDTKVFPPRRPKDMPQNSVWIDAPSLPISWHHGWWFGCYVAQSGTANYCRFVMANGQEVYAGDYLPCESKTPLPLSTKELVAPPHSGGAIWIADKRLKALAPVGAMRNGDLLLPVAVLDRCEKFKESER*
Ga0070766_101376321	3300005921	Soil	MSRQNLVPKLLLGFVAIIAGLPLFWLFGGIRWLDTQVFPPQRPKNMPEHAVWINAPTLPISWHHGWWFGCDMASSGATNYCRLVMANGEEVYAGEYLACAVKSAMPVSKIELVPPRTNVAMWIADKRLTPLAPIGFLRNGDLLLPVAALDRCDKLKNAASTDEAAP*
Ga0075028_1000582692	3300006050	Watersheds	MDRLSVFSKVLLALAALVVAFPLFWFAGGIAWLDTKVFPPRRPKEMPQNAIWIDAPALPISWHHGWWFGCDTPSSGLANYCRLVMPDGTKVYAGEYLPCESKSPVPMSEINLVLPPDQIEMWIADKRLKELAPIGALRDGDLLLPIAV
Ga0075028_1004753441	3300006050	Watersheds	MSRRQLLSKFLLGVLTIIISIPFFWLFGGIRWLDTQVFPPQRPKDMPENSVWIDAPALPISWHHGWWFGCDVSSSGTTNYCQLVDADGHTVSAGEYLPCGGKAPLPALNMHLVPPPDSTGMWIADQRLDGLAPIGALRSGGILLPIAALDRCDKIRADMRR*
Ga0066660_105126182	3300006800	Soil	MDRQSLISKLLLGVAALVLAFVLFWLAGGVRWLDTQVFPPRRPKDMPQNAVWIDAPGLPISWHHGWWFGCDLAASGTANYCRLLMANGEEVYAGVYLPCESKVPLTVSTKELAPPPDNVAMWIADKRLAKLAPVGALKSGDVLLPVDVLDRCDQFKQNGH*
Ga0099829_102138801	3300009038	Vadose Zone Soil	MDRPRLLSKWLFGIAALFVALLVALPLFWMSGGISWLDTKVFPPRLPKGMPQNSVWIDAPALPISWHRGWWFGCEVAQSGAANYCRFVEADGEQVYAGEYLPCESKIPLPVSTRELVAPPHSGAIWIADKRLNTLAPVGALRDGDLLLPVAVLDRCEKFKETGH*
Ga0099830_113170341	3300009088	Vadose Zone Soil	QRIKMDRPRLLSKWLFGIAALFVALLVALPLFWMSGGISWLDTKVFPPRLPKGMPQNSVWIDAPALPISWHRGWWFGCEVAQSGAANYCRFVEADGEQVYAGEYLPCESQIPLPVSTRELVAPPHSGAIWIADKRLNTLAPVGALRDGDLLLPVAVLDRCEKFKETGH*
Ga0105241_115625311	3300009174	Corn Rhizosphere	WLDTKVFPPRRPKGMAPNSVWIDAPPAPISWHHGWWFGCELAQSGTANYCRFVKANGEQVYAGEYLPCGSKIPFPISTQELVPPPRNEAIWIGDDRLKGLVPVGVLRNGDLLLPVVVLYRCDTLKQSRH*
Ga0105242_102820362	3300009176	Miscanthus Rhizosphere	MAMDRQSLVSRLLLGVGALVVAFPLFWLAGGVRWLETKVFPPRRPKDMPENAVWIDAPGLPISWHHGWWFGRDLASSGKANYCRLVMANGEEVYAGEYLPCETKVPLMVSTEELAPPPHNVEMWIADKRLAQLAPVGALKSGDLLLPVDVLDRCDKFKQSGH*
Ga0105249_130025261	3300009553	Switchgrass Rhizosphere	MERPSRLSSVLLAFAALCVALLVALPLFWASGGITWLDTKVFPPRSPKGMAPNSVWIDAPPAPISWHQGWWFGCELAQSGTANYCRFVKANGEQVYAGEYLPCGSKIPFPISTQELVPPPRNEAIWIGDDRLKGLVPVGVLRNGDLLLPVVVLYRCDTFKQ
Ga0126380_106277232	3300010043	Tropical Forest Soil	MDRLSLFSKVLLALVAMVVSLPLFWFAGGIGWLDTKVFPPRQPKDMPLNAIWIDAPALPLSWHHGWWFGCDTSSSGRTNYCRLVMPNGTKVYAGEYLPCEDRSPVPMSKINLVPPPDQVGMWIRDKRLTELAPIGALREGDLLLPVPVLDRCDELKTKHRAH*
Ga0074044_102362132	3300010343	Bog Forest Soil	MDRQSLVSKLLLGVAVLVVALPRFWLAGGIRWLDTKVFPPQRPKDMPRNAVWIDAPALPISWHHGWWFGCDLAPSGTTNHCRLVMANGEEVYAGEYLPCESRVPLPVSTKELAPPPHNVEMWIADKRLKTLVPVGALKNGDLLLPVDVLDRCDKFKQSGH*
Ga0126376_127679281	3300010359	Tropical Forest Soil	MDRQDIALRLLLGVLVVLVVPPLFWMAGGITWLDTKVFPPRRPKDMPQNSVWIDAPSLPISWHHGWWFGCYVAQSGTANYCRFVMANGQEVYAGEYLPCESKTPLPLSTKELVAPPHGGRAIWIADKRLKALAPVGAMRNGDLLLPVAVLDRCEKFKESER*
Ga0126381_1003551401	3300010376	Tropical Forest Soil	MGQQSLAPKVLLGLTAFVLALALFWLAGGIRWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGWWFGCDLAPSGTANYCRLEMANGEDVYAGEYLPCGSKLPVPVSTRELVPPPQNVEVWIADDRLKTLAPIGALQDGDLLLPVVVLDRCDKLKSIGR*
Ga0134124_102932381	3300010397	Terrestrial Soil	MERPSRLSSVLLAFAALCVALLVALPLFWASGGITWLDTKVFPPRRPKGMPPNSVWIDAPPAPISWHHGWWFGCELAQSGTANYCRFVKANGEQVYAGEYLPCGSKIPFPISTQELVPPPRNEAIWIGDDRLKGLVPVGVLRNGDLLLPVVVLYRCDTLKQSRH*
Ga0137776_15378222	3300010937	Sediment	MDRFSLFSKVLLALLALAALVVAFPLFWLAGGITWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGWWFGCDSAPSATANYCRLVMPDGTKVYAGEYLPCKNTSPVPMPEINLVPPPHQIEMWIADKRLKELAPIGALRQGDLLLPV
Ga0137391_115384511	3300011270	Vadose Zone Soil	FWMSGGISWLDTKVFPPRLPKGMPQNSVWIDAPALPISWHRGWWFGCEVAQSGAANYCRFVEADGEQVYAGEYLPCESKIPLPVSTRELVAPPHSGAIWIADKRLNTLAPVGALRDGDLLLPVAVLDRCEKFKETGH*
Ga0137389_108902751	3300012096	Vadose Zone Soil	MDRPRLLSKWLFGIAALFVALLVALPLFWMSGGISWLDTKVFPPRLPKGMPQNSVWIDAPALPISWHRGWWFGCEVAQSGAANYCRFVEADGEQVYAGEYLPCESKIPLPVSTRELVAPPHSGAIWIADKRLNTLAPVGALRDGDLLLPVAVLDWCEKFKETGR*
Ga0137365_101609252	3300012201	Vadose Zone Soil	MDRHSLASKLLLGFAALVIALPLFWLAGGISWLDTKVFPPRRPKDMPENAVWIDAPGLPISWHHGWWFGCDLAPSGTTNYCRLTMANGEEVYAGEYLPCGSKAPLPTSTKELVPPPNNVEMWIKDSRLKTLAPVGALRDGDLMLPVVVLDRCEKFKQTGR*
Ga0137378_105420791	3300012210	Vadose Zone Soil	LISKLLLGFAALVVALPLFWLAGAVSWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGWWFGCDLAPSGTANYCRLVMANGEEVYAGEYLPCESKVPLPVSTKELAPPPHTVEMWIADKRLKTLAPVGALQNGDLLLPVVVLDRCDKFKQSGH*
Ga0137372_102053282	3300012350	Vadose Zone Soil	MDRQSLVSKLLLGAAALVVALTLFWLAGGVRWLDTKVFPPRRPKDMPQNALWIDVPALPISWHHGWWFGCDLAPSGTANYCRLVMANGEEVYAGEYLPCESKVPLTVSTKELAPPPHNVEMWIADKRLAKLAPVGALKNGDLLLPVDVLDRCDKFKQSGH*
Ga0137367_103008522	3300012353	Vadose Zone Soil	MASRQKLVVKVLLLVAALVVALPFFWFFGGIRWLETRVFPPRRLKNMPQNAIWIDAPELPISWHHGWWFGCATPSSGEPNRCRVVLSDGSEVYAGDFLPCASKLPLPVSEIDLVFPADGMWIADKRLATLAPIGALRNGDFLVPVPLLDRCSELKGNRNAAD*
Ga0137366_105027542	3300012354	Vadose Zone Soil	LFWLAGGVRWLDTKVFPPRRPKDMPQNAVWIDVPALPISWHHGWWFGCDLAPSGTANYCRLVMANGEEVYAGEYLPCESKVPLTVSTKELAPPPHNVEMWIADKRLAKLAPVGALKNGDLLLPVDVLDRCDKFKQSGH*
Ga0137366_109300432	3300012354	Vadose Zone Soil	MAIARQKLVVNLLLVFAAVVVALPFFWFFGGIHWLETRVFPPRRPKNMPQNAIWIDAPELPISWHHGWWFGCLTPSSGTANKCRVVIPNGNEVYAGDYLPCSTKSPLPFSEIALVPPKDGMWIADKRLAGLAPIGALRNGDLLVPVLVVDRCDEFKGTQQPD*
Ga0150984_1046053671	3300012469	Avena Fatua Rhizosphere	SFFSKVALALAALVVAFPLFWFAGGIAWLDTKVFPPRHPKEMPQNAIWIDAPALPISWHHGWWFGCDTPSSGIANYCRLVMADGTKVYAGEYLPCEGRSPVPMSEINLVPPPDQIEMWIADKRLKELAPIGALREGDLLLPIAVLDRCDELKGKLRATDEIRPLQSEPLPGDSECNGDISTVRTITYLWQLR*
Ga0137419_113190151	3300012925	Vadose Zone Soil	MSTQNLVPKLLLGIVAIVVALPLFWLFGGVRWLDTQVFPPRRPKSMPENAVWIDAPALPISWHHGWWFGCDMSSSGTANYCRLVMANGEEVYAGEYLPCGGKSPMPVSTVELAPPPDNVEMWIADKRLPALAPIG
Ga0157371_107133331	3300013102	Corn Rhizosphere	KVFPPRRPKGMAPNSVWIDAPPAPISWHHGWWFGCELAQSGTANYCRFVKANGEQVYAGEYLPCGSKIPFPISTQELVPPPRNEAIWIGDDRLKGLVPVGVLRNGDLLLPVVVLYRCDTFKQSRH*
Ga0157369_115927251	3300013105	Corn Rhizosphere	LPFVLAALCVALLIALPLFWVSGGVTWLETKVFPPRRPKDMPANSVWIDAPSLPISWHHGWWFGCELAQSGAANYCRFVNANGEQVYAGEYLPCGTKTPFPLSTKELVPPPDNEAIWIADKRLKTLAPVGALSNGDFLLPVVVLDRCDKFKQSGR*
Ga0157374_107968551	3300013296	Miscanthus Rhizosphere	MELPSGFRSFLAFAALCVALLVALPLFWVSGGITWLDTKVFPPRRPRGMPPNSVWIDAPSLPISWHHGWWFGCELTPSGTANYCRFVKANGEQVYAGEYLPCATKIPLPISTQELVPPPRNEAIWIGDERLKGLVPVGVLRNGDLLLPVVVLNRCDTFKQSGH*
Ga0157372_100863734	3300013307	Corn Rhizosphere	LPFVLAALCVALLIALPLFWVSGGVTWLETKVFPPRRPKDMPANSVWIDAPSLPISWHHGWWFGCELAQSGAANYCRFVNANGEQVYAGEYLPCGTKTPFPLSTKELVPPPDNEAIWIADKRLKTLAPVGALSNGDLLLPVVVLDRCDKFKQSGR*
Ga0181537_100128526	3300014201	Bog	MDRQSLVSKLLLGFAALVVALPMFWFAGGIGWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGRWFGCDLAPSGTANYCRLVMASGEEVYAGEYLPCESKVPLPVTTKELAPPPRNVENWIADKRLKTLAPVGGLKNGDLLLPVDVLDRCELFKQNGH*
Ga0182019_100870202	3300014498	Fen	MDRQSLVSKLFLGIAALVVALPVFWLAGGINWLDTKVFPPRRPNDMPQNAVWIDAPALPISWHHGWWFGCDLARSGTANDCRLVMPSGEEVYAGEYLPCENKIPLPVSTKELVPPPQNVEMWIADKRLKTLAPIGALKNGDLLLPVEVLDRCDKFKQSGR*
Ga0182024_1000043368	3300014501	Permafrost	MHRQSLFSKLLLGFAALVVALPIFWFAGGISWLDTKVFPPRRPKDMPRNAVWIDAPALPISWHHGWWFGCDLAASGKANYCRLVMASGEEVYAGEYLPCESKAPLPVTTEELAAPPRNVEKWIADKRLKTLAPVGALKNGDLFLPVDVLDRCEQFKQSGH*
Ga0181525_103102271	3300014654	Bog	RIAMDRQSLVSKLLLGFAALVVALPMFWFAGGIGWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGRWFGCDLAPSGTANDCRLVMASGEEVYAGEYLPCESKVPLPVTTKELAPPPRNVENWIADKRLKTLAPVGGLKNGDLLLPVDVLDRCELFKQNGH*
Ga0137418_100972213	3300015241	Vadose Zone Soil	MDRQSLVSKLLSGVAALVVALPLFWLAGGVGWLDSTVVPPRRPKDMPPNAVWIDAPALPISWHHGWWFGCDLAPSGTANYCRLVMANGEEVYAGEYLPCESKVPLTVSTKELAPPPHNVEMWIADKRLAKLAPVGALKTGDLLLPVDVLDRCDKFKQSGQ*
Ga0132258_103011092	3300015371	Arabidopsis Rhizosphere	MDRQDIALRLLLGVLVVLVVPPLFWMGGGIRWLDTKVFPPRRPKDMPQNSVWIDAPSLPISWHHGWWFGCDVAQSGTANYCRFVMANGEEVYAGEYLPCESKTPLPLSTKELVAPPHSGALWIADQRLKALAPVGAMRNGDLLLPVAVLDRCEKFKESER*
Ga0132258_103511373	3300015371	Arabidopsis Rhizosphere	MDRQNLVLNLFLGVAVLVVSLPLFWLAGGIGWLDTKVFPPRRPEAMPQNAVWIAGPPLPISWHHGAWFGCTVAPSGTANYCRLVLANGKEVYAGEYLPCESKVPLAISTKELAPPPPNVGMWILDKRLARLAPVGALKSGDLILPVDVLDRCDKFKQSGQ*
Ga0132257_1001952732	3300015373	Arabidopsis Rhizosphere	MERPSRFSSVLLAFAAFCVALLVALPLFWASGGITWLDTKVFPPRRPKGMPPNSVWIDAPPAPISWHHGWWFGCELAQSGTANYCRFVKANGEQVYAGEYLPCGSKIPFPIPTQELVPPPRNEAIWIGDDRLKGLVPVGVLRNGDLLLPVVVLYRCDTFKQSRH*
Ga0182041_106940521	3300016294	Soil	MDRLSLLSKLILALLALVVALPLFWFVGGIRWLDTTVFPPQRPKDMPKNAAWIDAPALPISWHHGWWFGCDTSSSGRANYCRLVMANGSEVYAGEYLPCEDRSPLAMSKIDLVPPPNQVGMWIADKRLKTLAPIGALRKGDLLVPVAVLDRCDELKAKHRAN
Ga0182041_113973542	3300016294	Soil	CQRIAMDRLSLFSRILVALAGLIVGFPLFWFAGGITWLDTKVFPPRRPRDMPQNSVWIDAPALPISWHHGWWFGCETTSSGTANYCRLVMANGTKVFEGEYLPCEGRLPIPMSKLNLVPPPDQVGMWIADNRLKDLAPIGALREGARLLPVVALDRCDELKAKHGAN
Ga0066655_107431211	3300018431	Grasslands Soil	APVLAFPLFWLAGGVRWLDTQVFPPRRPKDMPQNAVWIDAPGLPISWHHGWWFGCDLAASGTANYCRLLMANGEEVYAGVYLPCESKVPLTVSTKELAPPPHNVAMWIADKRLAKLAPVGALKSGDVLLPVDVLDRCDQFQQNGHYGH
Ga0210403_105081081	3300020580	Soil	LGLVAILVSLPFFWLFGGIGWLDTQVFPPRRPRNMPKNAVWINAPALPISWHHGWWFGCDMSASGTANYCRLVMANGEDVYAGEYLPCGGKTPLPASSIELAPPPTNVEMWIADKRLTALAPIGFLRSGNFLLPVAALDRCDKFKDTRR
Ga0210399_100096424	3300020581	Soil	MRWGFRQLTVSCTERAFNQIHPHTSPIQCRWSTMSRQDFVPKLLLGLVAILVSLPFFWLFGGIGWLDTQVFPPRRPRNMPKNAVWINAPALPISWHHGWWFGCDMSASGTANYCRLVMANGEDVYAGEYLPCGGKTPLPASSIELAPPPTNVEMWIADKRLTALAPIGFLRSGNFLLPVAALDRCDKFKDTRR
Ga0210401_100097204	3300020583	Soil	MSSKNLVSPILVVAAVLIALPLFWLAGGIRWLDTRVFPPRRPRHMAKNSVWIDAPALPISWHHGWWFGCDISSSGTTNYCRLVGADGKQINAGEYLPCGRGSPIPESSMLLVPPPPRSFGMWLADNRLSSLSPIGYLSDGDILLPAAAIDRCRELTRVRR
Ga0210401_101289172	3300020583	Soil	MDRQSLVSKLLLGVAALVVALPLFWLAGGVRWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGWWFGCDLAPSGTANYCRLVMANGEEVYAGEYLPCESKVPLTVSTKEFAPPPHNVEMWIADKRLAKLAPVGALKTGDLLLPVDVLDRCDKFKQSGH
Ga0210401_102937032	3300020583	Soil	VDRTGLASKVLLGLAVIAAALPIFWFAGGIRWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGWWFGCDVAHSGDANRCRLVMANDQEVYAGEYLPCQTQTPLPVSTNELTAPPHSGAIWIADRRLGTLAPVGVLRNGDLLLPVAVLDRCEEFKRTGR
Ga0210401_106744282	3300020583	Soil	MDRLSFFSKVSLALAALVVALPLFWFAGGIAWLDTKVFPPRRPKEMPQNAIWIDAPALPTSWHHGWWFGCDTPSSGMANYCRLVMADGTKVYAGEYLPCEDRSPVPMSEIDLVPPPDQIEMWIADKRLKELAPIGALREGDLLLPIAVLDRCDELKAKLRAN
Ga0210404_106202372	3300021088	Soil	MDRQSLVSKLLLGVAALVVALPLFWLAGGVRWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGWWFGCDLAPSGTANYCRLVMANGEEVYAGEYLPCESKVPLTVSTKEFAPPPHNVEMWIADKRLAKLAPVGALKTG
Ga0210400_101125582	3300021170	Soil	DISPTDCQILVECHRIAMDRQSLVSKLLLGVAALVVALPLFWLAGGVRWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGWWFGCDLAPSGTANYCRLVMANGEEVYAGEYLPCESKVPLTVSTKEFAPPPHNVEMWIADKRLAKLAPVGALKTGDLLLPVDVLDRCDKFKQSGH
Ga0210396_103187973	3300021180	Soil	MSSKNLVSPILVVAAVLIALPLFWLAGGIRWLDTRVFPPRRPRHMPKNSVWIDAPALPISWHHGWWFGCDISSSGTTNYCRLVGADGKQINAGEYLPCGRGSPIPESSMLLVPPPPRSFGMWLADNRLSSLSPIGYLSDGDILLPAAAIDRCRELTRVRR
Ga0210396_107284822	3300021180	Soil	LLGLAVIAAALPIFWFAGGIRWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGWWFGCDVAHSGDANRCRLVMANDQEVYAGEYLPCQTQTPLPVSTNELTAPPHSGAIWIADRRLGTLAPVGVLRNGDLLLPVAVLDRCEEFKRTGR
Ga0210388_100793412	3300021181	Soil	MSRQNLVHKLLLGFVAIIAGLPLFWLFGGIRWLDTQVFPPRRPKNMPEDAVWINAPTLPISWHHGWWFGCGMASSGATNYCRLVMANGEEVYAGEYLACSVKSAMPVSNIELVPLPTNVAMWIADKRLTTLAPIGFLRNGDLLLPVAALDRCDKLKNTASTDEAAP
Ga0210397_104602561	3300021403	Soil	LAGGVRWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGWWFGCDLAPSGTANYCRLVMANGEEVYAGEYLPCESKVPLTVSTKEFAPPPHNVEMWIADKRLAKLAPVGALKTGDLLLPVDVLDRCDKFKQSGH
Ga0210389_1000082618	3300021404	Soil	MSSKNLVSPILVVAAVLIALPLFWLAGGIRWLDTRVFPPRRPRHMAKNSVWIDAPALPISWHHGWWFGCDISSSGTTNYCRLVGADGKQINAGEYLPCGRGSPIPESSMLLVPPPPRSFGMWLADNRLSSLSPIGYLSDGDILLPAAAIDRCRELMHVRR
Ga0210384_110442511	3300021432	Soil	GVLASLRFLFAKIRVDECYRDVTPNDYQRGVECQRIAMDRLSFFSKVSLALAALVVALPLFWFAGGIAWLDTKVFPPRRPKEMPQNAIWIDAPALPTSWHHGWWFGCDTPSSGMANYCRLVMADGTKVYAGEYLPCEDRSPVPMSEIDLVPPPDQIEMWIADKRLKELAPIGALREGDLLLPIAVLDRCDELKAKLRAN
Ga0210390_109333812	3300021474	Soil	LRFLFAKIRVDECYRDVTPNDYQRGVECQRIAMDRLSFFSKVSLALAALVVALPLFWFAGGIAWLDTKVFPPRRPKEMPQNAIWIDAPALPTSWHHGWWFGCDTPSSGMANYCRLVMADGTKVYAGEYLPCEDRSPVPMSEIDLVPPPDQIEMWIADKRLKELAPIGALREGDLLLPIAVLDRCDELKAKLRAN
Ga0210398_103185962	3300021477	Soil	MSRQNLVPKLLLGFVAIIAGLPLFWLFGGIRWLDTQVFPPQRPKNMPEHAVWINAPTLPISWHHGWWFGCDMASSGATNYCRLVMANGEEVYAGEYLACAVKSAMPVSKIELVPPRTNVAMWIADKRLTPLAPIGFLRNGDLLLPVAALDRCDKLKNAASTDEAAP
Ga0210409_116873401	3300021559	Soil	DSRWLKCIPVDRTGLASKVLLGLAVIAAALPIFWFAGGIRWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGWWFGCDVAHSGDANRCRLVMANDQEVYAGEYLPCQTQTPLPVSTNELTAPPHSGAIWIADRRLGTLAPVGVLRNGDLLLPVAVLDRCEEFKRTGR
Ga0126371_100560796	3300021560	Tropical Forest Soil	LPWSRLFLPIVVETRRLHFFFAFFGVNECNRDFSSIDSGWLKCIPVDRTGLASKVLLGLAVTAAVLPIFWFAGGIRWLDTKVFPPRRPKDMPQNAVWIDAPALTISWHHGWWFGCDVAHSGDANRCRLVMANDQEVYAGEYLPCQTKTPLPVSTTELTAPPHSGAIWIADRRLGTLAPVGVLRNGDHLLPVAVLDRCEEFKRTGC
Ga0126371_139290011	3300021560	Tropical Forest Soil	IALVVAFPLFWFAGGITWLDTRVFPPRRPKDMPPNAVWIDAPALPISWHHGWWFGCDTPSSGTANYCRLVMANGSEVYAGEYLPCENQSPVAMSKIDLVPPPDQIGMWIADKRLRELAPIGALRNGDLLVPGAVIDRCDELKASHRPN
Ga0224557_11991921	3300023101	Soil	MDRQSLVSKLLFGVATLVVALPMFWVAGGISWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGWWFGCDLAPSGTANYCRLVTASGEEVYSGEYLPCESKVPLPVATEELAPPPLNVEKWIADTRLKTLAPVGALKNGDLLLPVDVLDRCNKF
Ga0224551_10014812	3300023259	Soil	MHRQSLFSKLLLGFAALVVALPIFWFAGGISWLDTKVFPPRRPKDMPRNAVWIDAPALPISWHHGWWFGCDLAASGKANYCRLVMASGEEVYAGEYLPCESKAPLPVTTEELAAPPRNVEKWIADKRLKTLAPVGALKNGDLFLPVDVLDRCEQFKQSGH
Ga0207657_102883962	3300025919	Corn Rhizosphere	MERPSRLSSVLLAFAALCVALLVALPLFWASGGITWLDTKVFPPRRPKGMAPNSVWIDAPPAPISWHHGWWFGCELAQSGTANYCRFVKANGEQVYAGEYLPCGSKIPFPISTQELVPPPRNEAIWIGDDRLKGLVPVGVLRNGDLLLPVVVLYRCDTFKQSRH
Ga0207686_101457141	3300025934	Miscanthus Rhizosphere	MAMDRQSLVSRLLLGVGALVVAFPLFWLAGGVRWLETKVFPPRRPKDMPENAVWIDAPGLPISWHHGWWFGRDLASSGKANYCRLVMANGEEVYAGEYLPCESKVPLTVSTKELAPPPHNVEMWIADKRLAKLAPVGALKSGDLLLPVDVLDRCDKFKQSGH
Ga0207641_123507001	3300026088	Switchgrass Rhizosphere	MDRQNLVLNLFLGVAVLVVSLPLFWLAGGIGWLDTKVFPPRRPEAMPQNAVWIAGPTLPISWHHGAWFGCTVAPSGTANYCRLVLANGKEVYAGEYLPCESKVPLAISTKELAPPPPNVGMWILDKRLARLAPVGALKSGDLILPVDV
Ga0209059_11457722	3300026527	Soil	MDRQSLISKLLLGVAALVLAFVLFWLAGGVRWLDTQVFPPRRPKDMPQNAVWIDAPGLPISWHHGWWFGCDLAASGTANYCRLLMANGEEVYAGVYLPCESKVPLTVSTKELAPPPHNVAMWIADKRLAKLAPVGALKSGDVLLPVDVLD
Ga0208984_11201541	3300027546	Forest Soil	LLLGVVALVVALPMFWLAGGISWLDTKVFPPRRPKDMPQNAVWIDAPSLPISWHHGWWFGCDLAPSGTANYCRLVMASGEEVYAGEYLPCESKAPLPVSTKELAPPPHNVEKWIADKRLKTLAPVGALKNGDLLLPVDVLDRCDKFKQSGH
Ga0209060_105376412	3300027826	Surface Soil	IRWLETKVFPPQRPKNMPQNAIWIDAPALPISWHHGWWFGCDAPLSGTANHCRLVTANGGEVYAGEYLPCEDRSPVGMSKIDLVPPHDQVGMWIADKRLRELAPIGALRKGDLLLPVAVLDRCDELKAKRRVN
Ga0209180_107241161	3300027846	Vadose Zone Soil	RIKMDRPRLLSKWLFGIAALFVALLVALPLFWMSGGISWLDTKVFPPRLPKGMPQNSVWIDAPALPISWHRGWWFGCEVAQSGAANYCRFVEADGEQVYAGEYLPCESKIPLPVSTRELVAPPHSGAIWIADKRLNTLAPVGALRDGDLLLPVAVLDRCEKFKETGH
Ga0209624_1000010645	3300027895	Forest Soil	MHRHGLFSKLLLGVAALVVALPLFWLAGGINWLDTKVFPPRRPKDMPQNAVWLDAPALPISWHHGWWFGCDLAPSGTANYCRLVTANGAEVYAGEYLPCESKVPLPVSTKELAPPHNVEMWISDKRLKTLAPVGALENGDLLLPVEVLDRCDKFKQSGH
Ga0265338_101239092	3300028800	Rhizosphere	MDRQSLLSKLPLGVAALVVALPLFWLAGGVSWLDTKVFPPRRPKNMPQNAVWIDAQALPISWHHRWWFGCDLAPSGLANYCRLVMANGDEVYAGEYLPCESSVPLTASTKEFAPRPHNVEMWITDRRLAKLAPVGALKSGDLLLPVDVLDRYDKFKQSGH
Ga0222749_100259211	3300029636	Soil	QSLVSKLLLGVAALVVALPLFWLAGGVRWLDTKVFPTRRPKDMPQNAVWIDAPALPISWHHGWWFGCDLAPSGTANYCRLVMANGEEVYAGEYLPCESKVPLTVSTKEFAPPPHNVEMWIADKRLAKLAPVGALKTGDLLLPVDVLDRCDKFKQSGH
Ga0073994_110415841	3300030991	Soil	KDRQSLVSKLLLGVVALVVALPMFWLAGGISWLDTKVFPPRRPKDMPQNAVWIDAPSLPISWHHGWWFGCDLAPSGTANYCRLVMASGEEVYAGEYLPCESKAPLPVSTKELAPPPHNVEKWIADKRLKTLAPVGALKNGDLLLPVDVLDRCDKFKQSGH
Ga0302324_1001836743	3300031236	Palsa	MDRQSLVSKLLLGFAALVVALPMFWFAGGIGWLDTKVFPPRRPKDMPQNAVWIDAPALPISWHHGRWFGCDLAPSGTANYCRLVMASGEEVYAGEYLPCESKVPLPVTTKELAPPPRNVENWIADKRLKTLAPVGGLKNGDLLLPVDVLDRFELFKQNGH
Ga0265325_104272972	3300031241	Rhizosphere	LDTKVFPPRRPKNMPQNAVWIDAQALPISWHHRWWFGCDLAPSGLANYCRLVMANGDEVYAGEYLPCESSVPLTASTKEFAPRPHNVEMWITDRRLAKLAPVGALKSGDLLLPVDVLDRYDKFKQSGH
Ga0265342_103010071	3300031712	Rhizosphere	IAMDRQSLLSKLPLGVAALVVALPLFWLAGGVSWLDTKVFPPRRPKNMPQNAVWIDAQALPISWHHRWWFGCDLAPSGLANYCRLVMANGDEVYAGEYLPCESSVPLTASTKEFAPRPHNVEMWITDRRLAKLAPVGALKSGDLLLPVDVLDRYDKFKQSGH
Ga0307473_110393231	3300031820	Hardwood Forest Soil	MAITRQKLVVNLLLAFAAVVVALPFFWLFGGIHWLDTRVFPPRRPKHMPQNAIWIDAPALPISWHHGWWFGCSSTNQCRLAMPNGDEVYAGNYLPCGSKSVPPLSQIDLVPPPDSVGMWIADKRLPTLAPIGASRNGDLLIPVLVIDRCDELKTR
Ga0306924_123907051	3300032076	Soil	FWFAGGITWLDTKVFPPRRPRDMPQNSVWIDAPALPISWHHGWWFGCETTSSGTANYCRLVMANGTKVFEGEYLPCEGRLPIPMSKLNLVPPPDQVGMWIADNRLKDLAPIGALREGDLLLPVVALDRCDELKAKHGAN
Ga0335078_10000187102	3300032805	Soil	MTRSTLFSKVLFALIALVVAFPLFWFAGGIRWLDTKVFPPRLPKNMPLNAVWIDAPALPISWHHGWWFGCDTTLSGKAYYCRLVMANGSEVYAGEYLPCENGSPAAMSKIDLVPPPDQVGMWIADTRLKELAPIGALRKGDLLLPAAVLDRCDELKAKRRVN
Ga0335078_126202521	3300032805	Soil	LVLALPLFWFAGGIRWLDTKVFPPRRPKDMPPNAVWIDAPALPISWHHGWWFGCDTPLSGRANYCRLVMADGSEVYEGEYLPCENGAPVAMSKIDLVPPPDQVGMWIADKRLKELAPIGALRKGDLLVPVAVLDRCDELKPKRRVN
Ga0335080_105995892	3300032828	Soil	MTRSTLFSKVLFAFIALVLALPLFWFAGGIRWLDTKVFPPRRPKDMPPNAVWIDAPALPISWHHGWWFGCDTPLSGRANYCRLVMADGSEVYEGEYLPCENGAPVAMSKIDLVPPPDQVGMWIADKRLKELAPIGALRKGDLLVPVAVLDRCDELKPKRRVN
Ga0335081_121713261	3300032892	Soil	MTRSTLFSKVLFAFIALVLALPLFWFAGGIRWLDTKVFPPRRPKDMPPNAVWIDAPALPISWHHGWWFGCDTPLSGRANYCRLVMADGSEVYEGEYLPCENGAPVAMSKIDLVPPPDQVGMWIADKRLKELAPIGALRKGDLLVPVAVL
Ga0335069_101906511	3300032893	Soil	MDHPSFSKVLFGLAAFFVALLIVLPVFWISGGIRWLDTKVFPPRLPKNMPQNSVWIDAPALPISWHNGWWFGCDVTPSGEANYCRLVKASGEEVYGGEYLPCGSKTPLPVSAKELVTPSHSGAIWIADTRLDKLAPVGALRDGNLLFPVAALDRCDKFKATGH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102872

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences