Metagenome / Metatranscriptome Family F102944

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F102944
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	107 residues
Representative Sequence	VRKTAFALLITLLLATLAVAADTYQTGKVVKWDNGTYPDGKKTKAWIVYQVQGGGDNMLYSIARHKETKPQMEPGEQVQYQVKGNQMTVVNAKGKKNNYQIVGQSQAPAQ
Number of Associated Samples	52
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.31 %
% of genes near scaffold ends (potentially truncated)	24.75 %
% of genes from short scaffolds (< 2000 bps)	76.24 %
Associated GOLD sequencing projects	45
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.386 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil (36.634 % of family members)
Environment Ontology (ENVO)	Unclassified (36.634 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.317 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 9.42% β-sheet: 40.58% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01053	Cys_Met_Meta_PP	36.63
PF12706	Lactamase_B_2	25.74
PF00291	PALP	4.95
PF00924	MS_channel	1.98
PF00970	FAD_binding_6	0.99
PF00158	Sigma54_activat	0.99
PF14833	NAD_binding_11	0.99
PF01058	Oxidored_q6	0.99
PF04679	DNA_ligase_A_C	0.99
PF02580	Tyr_Deacylase	0.99
PF03061	4HBT	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	36.63
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	36.63
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	36.63
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	36.63
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	36.63
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	36.63
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	36.63
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	36.63
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	36.63
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	36.63
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	36.63
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.98
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.98
COG0377	NADH:ubiquinone oxidoreductase 20 kD subunit (chain B) or related Fe-S oxidoreductase	Energy production and conversion [C]	0.99
COG1490	D-aminoacyl-tRNA deacylase	Translation, ribosomal structure and biogenesis [J]	0.99
COG1740	Ni,Fe-hydrogenase I small subunit	Energy production and conversion [C]	0.99
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.99
COG1941	Coenzyme F420-reducing hydrogenase, gamma subunit	Energy production and conversion [C]	0.99
COG3260	Ni,Fe-hydrogenase III small subunit	Energy production and conversion [C]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.39 %
Unclassified	root	N/A	38.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.39 %
Unclassified	root	N/A	38.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.39 %
Unclassified	root	N/A	38.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	48.51 %
Unclassified	root	N/A	38.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	35.64 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.99 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.61 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	34.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.61 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	34.65 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.61 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	27.72 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.61 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	18.81 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.99 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10031503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1491	Open in IMG/M
3300003218\|JGI26339J46600_10050066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1121	Open in IMG/M
3300003218\|JGI26339J46600_10165324	Not Available	509	Open in IMG/M
3300003219\|JGI26341J46601_10221593	Not Available	509	Open in IMG/M
3300003368\|JGI26340J50214_10033806	All Organisms → cellular organisms → Bacteria → Acidobacteria	1500	Open in IMG/M
3300003368\|JGI26340J50214_10053586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1111	Open in IMG/M
3300003368\|JGI26340J50214_10178444	Not Available	527	Open in IMG/M
3300004080\|Ga0062385_10016172	All Organisms → cellular organisms → Bacteria	2691	Open in IMG/M
3300004080\|Ga0062385_10067851	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1616	Open in IMG/M
3300004092\|Ga0062389_100519351	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1341	Open in IMG/M
3300004092\|Ga0062389_101621892	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300004092\|Ga0062389_103104561	Not Available	621	Open in IMG/M
3300004092\|Ga0062389_103427111	Not Available	594	Open in IMG/M
3300004152\|Ga0062386_100109177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2132	Open in IMG/M
3300004152\|Ga0062386_100344237	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1194	Open in IMG/M
3300004152\|Ga0062386_100608699	Not Available	893	Open in IMG/M
3300004152\|Ga0062386_100868137	Not Available	745	Open in IMG/M
3300004152\|Ga0062386_101287489	Not Available	608	Open in IMG/M
3300004152\|Ga0062386_101480751	Not Available	566	Open in IMG/M
3300004152\|Ga0062386_101736506	Not Available	521	Open in IMG/M
3300004152\|Ga0062386_101839840	Not Available	505	Open in IMG/M
3300006162\|Ga0075030_100325586	All Organisms → cellular organisms → Bacteria → Acidobacteria	1227	Open in IMG/M
3300006795\|Ga0075520_1061144	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1782	Open in IMG/M
3300009698\|Ga0116216_10181547	All Organisms → cellular organisms → Bacteria → Acidobacteria	1292	Open in IMG/M
3300010339\|Ga0074046_10005056	All Organisms → cellular organisms → Bacteria	10589	Open in IMG/M
3300010339\|Ga0074046_10035723	All Organisms → cellular organisms → Bacteria	3366	Open in IMG/M
3300010339\|Ga0074046_10076320	All Organisms → cellular organisms → Bacteria → Acidobacteria	2182	Open in IMG/M
3300010339\|Ga0074046_10114665	Not Available	1733	Open in IMG/M
3300010339\|Ga0074046_10628814	Not Available	634	Open in IMG/M
3300010341\|Ga0074045_10083794	All Organisms → cellular organisms → Bacteria	2228	Open in IMG/M
3300010341\|Ga0074045_10121115	Not Available	1796	Open in IMG/M
3300010341\|Ga0074045_10162754	All Organisms → cellular organisms → Bacteria → Acidobacteria	1510	Open in IMG/M
3300010341\|Ga0074045_10199964	All Organisms → cellular organisms → Bacteria → Acidobacteria	1339	Open in IMG/M
3300010341\|Ga0074045_10828520	Not Available	585	Open in IMG/M
3300010343\|Ga0074044_11103669	Not Available	519	Open in IMG/M
3300010376\|Ga0126381_101381109	Not Available	1018	Open in IMG/M
3300010376\|Ga0126381_103713264	All Organisms → cellular organisms → Bacteria	597	Open in IMG/M
3300010379\|Ga0136449_100010311	All Organisms → cellular organisms → Bacteria	25887	Open in IMG/M
3300010379\|Ga0136449_102679270	Not Available	708	Open in IMG/M
3300014159\|Ga0181530_10153379	All Organisms → cellular organisms → Bacteria	1311	Open in IMG/M
3300014164\|Ga0181532_10525447	Not Available	647	Open in IMG/M
3300014165\|Ga0181523_10026757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3755	Open in IMG/M
3300014200\|Ga0181526_10343643	Not Available	949	Open in IMG/M
3300016341\|Ga0182035_10447483	All Organisms → cellular organisms → Bacteria	1094	Open in IMG/M
3300016357\|Ga0182032_11034510	Not Available	702	Open in IMG/M
3300016371\|Ga0182034_11209244	Not Available	657	Open in IMG/M
3300016750\|Ga0181505_10458121	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300017932\|Ga0187814_10409251	Not Available	529	Open in IMG/M
3300017955\|Ga0187817_10402871	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300017955\|Ga0187817_10759321	Not Available	619	Open in IMG/M
3300017970\|Ga0187783_10005758	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9120	Open in IMG/M
3300017970\|Ga0187783_11342605	Not Available	515	Open in IMG/M
3300017972\|Ga0187781_10380658	All Organisms → cellular organisms → Bacteria → Acidobacteria	1006	Open in IMG/M
3300018006\|Ga0187804_10066191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1438	Open in IMG/M
3300018062\|Ga0187784_10703970	Not Available	808	Open in IMG/M
3300018085\|Ga0187772_10309784	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1084	Open in IMG/M
3300018086\|Ga0187769_10396680	Not Available	1037	Open in IMG/M
3300018086\|Ga0187769_11220812	Not Available	569	Open in IMG/M
3300025579\|Ga0207927_1002527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7435	Open in IMG/M
3300027680\|Ga0207826_1065936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	998	Open in IMG/M
3300027698\|Ga0209446_1001475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5598	Open in IMG/M
3300027698\|Ga0209446_1004005	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3607	Open in IMG/M
3300027812\|Ga0209656_10001940	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13483	Open in IMG/M
3300027812\|Ga0209656_10005314	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	8273	Open in IMG/M
3300027812\|Ga0209656_10015318	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4762	Open in IMG/M
3300027812\|Ga0209656_10032876	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3057	Open in IMG/M
3300027812\|Ga0209656_10098277	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1542	Open in IMG/M
3300027812\|Ga0209656_10159543	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1123	Open in IMG/M
3300027812\|Ga0209656_10356692	Not Available	664	Open in IMG/M
3300027824\|Ga0209040_10025653	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3785	Open in IMG/M
3300027824\|Ga0209040_10100932	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1634	Open in IMG/M
3300027824\|Ga0209040_10133305	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1362	Open in IMG/M
3300027824\|Ga0209040_10202758	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1027	Open in IMG/M
3300027824\|Ga0209040_10215417	Not Available	986	Open in IMG/M
3300027824\|Ga0209040_10460067	Not Available	576	Open in IMG/M
3300027825\|Ga0209039_10004783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	9646	Open in IMG/M
3300027902\|Ga0209048_10004149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	13911	Open in IMG/M
3300027911\|Ga0209698_10734224	Not Available	750	Open in IMG/M
3300028800\|Ga0265338_10636623	Not Available	740	Open in IMG/M
3300030494\|Ga0310037_10129010	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1158	Open in IMG/M
3300031595\|Ga0265313_10014867	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4570	Open in IMG/M
3300032076\|Ga0306924_10768200	Not Available	1077	Open in IMG/M
3300032261\|Ga0306920_100598232	Not Available	1632	Open in IMG/M
3300032770\|Ga0335085_10049997	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5657	Open in IMG/M
3300032770\|Ga0335085_10779533	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1054	Open in IMG/M
3300032770\|Ga0335085_11064738	All Organisms → cellular organisms → Bacteria → Terrabacteria group	869	Open in IMG/M
3300032770\|Ga0335085_11746425	Not Available	639	Open in IMG/M
3300032782\|Ga0335082_10002816	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	18797	Open in IMG/M
3300032782\|Ga0335082_10155840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2207	Open in IMG/M
3300032782\|Ga0335082_10794285	Not Available	808	Open in IMG/M
3300032805\|Ga0335078_11091990	All Organisms → cellular organisms → Bacteria → Acidobacteria	934	Open in IMG/M
3300032828\|Ga0335080_10238108	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1992	Open in IMG/M
3300032828\|Ga0335080_11686718	Not Available	622	Open in IMG/M
3300032892\|Ga0335081_11124989	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	903	Open in IMG/M
3300032893\|Ga0335069_10515449	All Organisms → cellular organisms → Bacteria → Acidobacteria	1384	Open in IMG/M
3300032893\|Ga0335069_10550417	All Organisms → cellular organisms → Bacteria → Acidobacteria	1331	Open in IMG/M
3300032955\|Ga0335076_10433284	All Organisms → cellular organisms → Bacteria → Acidobacteria	1199	Open in IMG/M
3300033004\|Ga0335084_10341832	All Organisms → cellular organisms → Bacteria	1545	Open in IMG/M
3300033004\|Ga0335084_10905593	All Organisms → cellular organisms → Bacteria → Acidobacteria	892	Open in IMG/M
3300033158\|Ga0335077_10027695	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	7073	Open in IMG/M
3300033158\|Ga0335077_10243886	Not Available	1995	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.02%
Host-Associated	Host-Associated	1.98%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	49.50%
Aquatic	Environmental → Aquatic	48.51%
Plants	Host-Associated → Plants	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.50%
Freshwater	Environmental → Aquatic → Freshwater	46.53%
Sediment	Environmental → Aquatic → Sediment	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.98%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	45.54%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	35.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	12.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.98%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.99%
Loam	Environmental → Terrestrial → Soil → Loam	0.99%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	41.58%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	35.64%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.94%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.95%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.98%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.99%

Habitat	Taxonomy	Distribution
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	36.63%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	17.82%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	10.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.95%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.96%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.96%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.96%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.98%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.98%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.99%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006795	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-B	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100315032	3300003218	Bog Forest Soil	VRKVAFALLMTLLLSCLALAADTYQTGKVVKWDNGTYPQGDHKTKSWIVYQVQGDNMLYSIARHKETKPQMEPGEQVQYHIKGNQMTVVNAKEKKNNYQIVGQSQAAGQ*
JGI26339J46600_100500662	3300003218	Bog Forest Soil	MTLLLSCLAVAADTYQTGKVLKWDNGTYPQGDHKTKAWIVYQVQGDNMLYSIARHKETKPQMXPGEQVQYHVKGNQMTVVNASGKKNNYQIVGQSQAPXQ*
JGI26339J46600_101653241	3300003218	Bog Forest Soil	VRKTAFVLLITLALSAVAIAADTYQTGKVVKWDDGTYPDKKKTKPWVVYQVQGDNLLYSIARHKETKPQMQPGEAVQYEVKGSKMTVVNA
JGI26341J46601_102215931	3300003219	Bog Forest Soil	FRGIITVGKLNYDAGDTVRKTAFALVITLFLTAFAVAADTYQTGKIVKWDNGTYPDGKKTKAWIVYQVQGDNLLYSIARHKETKAQMQPGETVQYEVKGNDMTVINAKGKKTKYQVVGQSQAPSPMPTQ*
JGI26340J50214_100338061	3300003368	Bog Forest Soil	VRKTAFALLITLLLTAVAVAADTYQTGKIVKWDNGTYPDGKKTKAWIVYQVQGDNLLYSIARHKETKAQMEPGDTVQYELKGNKMTVVNAKGKKETYQVVGQAQAASPAPAQ*
JGI26340J50214_100535862	3300003368	Bog Forest Soil	VRKTAFVLLITLALSAVAIAADTYQTGKVVKWDDGTYPDKKKTKPWVVYQVQGDNLLYSIARHKETKPQMQPGEAVQYEVKGSKMTVVNAKGKKNDYQIVGQSQAAGQ*
JGI26340J50214_101784441	3300003368	Bog Forest Soil	VRKIAFALLLILSLSWLALAADTYQTGKIVKWDNGTYPDGKKTKDWIVYQVQGDNLLYSIARHKETKAQMEPGETVQYQVKGNQMTVVNAKGKKNNYQIVGQSQAPGQ*
Ga0062385_100161723	3300004080	Bog Forest Soil	VKKTAFVLLISLLLTAFAAAADTYQTGKVVKWDNGTYPDKKKTKNWIVYQVQGENLVYSIARHKETKPQMQPGETVQYEVKGNKVTVIDAKGKKTTYQLVGQAEVPSQAPAQ*
Ga0062385_100678512	3300004080	Bog Forest Soil	VRKAALALLVTSLLTGFAVAADTYQAGKVVKWENGTYPQGDHKTKSWIVYQVQSDNMLYSIARHKETKPKMQPGEPVQFRAKGNQMTVVNAQGKKTEYQIVGQSEAPGH*
Ga0062389_1005193512	3300004092	Bog Forest Soil	VRKIAFALVITLLLASFAVAADTYQAGKIVKWDNGTYPDGKKTKAWIVYQVQGDNILYSIARHKETKPQMQPGEAIQYLVKGNKMDVVNAKGKKNNYQVVGQSQAPGQ*
Ga0062389_1016218922	3300004092	Bog Forest Soil	VRETALALLMTFLLTGFALAADTYQAGKVVKWDYGTYPQGDHKTKGWIVYQVQSDNRLYSIARHKETKPKMQPGEPVQFRVKGNQMTVVNAQGKKTEYQIVGQSEVPALRSRRQGRR*
Ga0062389_1031045611	3300004092	Bog Forest Soil	MRKTAFILLLTLLLAAFAVAADTYQTGKVVKWDNGSYPDGKKTKPWIVYQVQGDNMLYSVARHKENKPRMQPGDAVQYEVKGNKMTVVNAKGKKNEYQIVGQAQASAQ*
Ga0062389_1034271111	3300004092	Bog Forest Soil	FRGDLVRKIALALLLTLLLSTLAIAADTYQTGKIVKWDNGNYPDGKKTKAWIVYQVQGDNMLYSVARHKETKPQMEPGEPVQYEVKGNQMTLVNAKGKKNNYQIVGQSQAPAQ*
Ga0062386_1001091772	3300004152	Bog Forest Soil	MSLLLTTLTVAADTYQTGKVVKWDNGTYPDGKKTKAWIVYQVQGDNNMLYSIARHKETKPQMQPGDAVQYQVKGNKMTVVDAKGKKNDYQIVGQSQALGQ*
Ga0062386_1003442372	3300004152	Bog Forest Soil	MRKTAFVLLITLLLSPIAIAADTYQTGKIVKWDDGTYPDKKKTKPWVVYQVQGDNLLYSIARHKETKPQMQPGEPVQYEVKGNKMTVVSAKGKKETYQIVGQSQAAGQ*
Ga0062386_1006086991	3300004152	Bog Forest Soil	VRKTAFVLLIVLALAAVTVAADVYQTGKIVKWDNGTYPQGDHKTKAWIVYQVQGDNLLYSIARHKETKAQMEPGEQVQYHVKGNQMTVVNAKGKKEKYQIVGQSQAPGQ*
Ga0062386_1008681372	3300004152	Bog Forest Soil	VRKTVFALVTMLLLTAVAVAAHTYQTGKVVKWDNGTYPDGKKTKPWIVYHLQGDNLLYSVARHKETKPQMQPGDTVQYQVAGNKMTVVNAKGKKTRYQIVGQAQAPPVPGQ*
Ga0062386_1012874891	3300004152	Bog Forest Soil	VKKTAFALLITLLLTSFAVAADTYQTGKIVKWDNGTYPDGKKTKAWIVYQVQGDNLLYSIARHKETKPQMEPGEQIQYHVKGNQITVVNAKGKKNNYQIVGQSQA
Ga0062386_1014807511	3300004152	Bog Forest Soil	VRKAAFILLVTLALSAVAIAADTYQTGKVVKWDNGTYPDGKKTKAWIVYQVQSDNMLYSVARHKETKPEMQPGDAVQYEVKGNKMTVVNAKGKKETYQIVGQSQAAGQ*
Ga0062386_1017365061	3300004152	Bog Forest Soil	VRKTAFLLVITLLLTAFAAAADTYQTGKIVKWDNGTYPDKKKTKAWIVYQVQGGDLLYSIARHKETKAQMQPGETVQYELKGNKMTVVNAKGKKETYQIVGQSQAPGQ*
Ga0062386_1018398401	3300004152	Bog Forest Soil	AFLLLITLALSAIAFAADTYQTGKIVKWDNGTYPDGKKTKSWIVYQVQGDSTLYSIARHKETKPQMQPGEQVQYLVKGNKMDVVNAKGKKNNYQIVGQSQAPGQ*
Ga0075030_1003255862	3300006162	Watersheds	MISAPEASLINDMGRRPEGLLYRQLEAPLRKTAFVLLMTLLLTAFAVAADTYQTGKVVKWDNGSYPDGKKTKAWIVYQVQGDNMLYSIARHKETKPQMQPGDAVQYFVKGNQMTVEAKGKKTKYEIVGQQQAPAQ*
Ga0075520_10611442	3300006795	Arctic Peat Soil	VRKIAFALLITLLLSCLAVAGDTYQTGQIVKWDKGTYPQGDHKTKAWIVYQVQGDNMFYSIAHHKETKPQMEPGEQVQYHVKGNQMKVVNAKGKKTEYQIVGQAQAPGQ*
Ga0116216_101815472	3300009698	Peatlands Soil	MLSFRGDPVRKTALALLVTFLLTGFAAAADTFQAGKVVKWENGTYPQGDHKTKAWIVYQVQSDNMLYSIARHKETKPKMQPGEPVQFRAKGNQMTVVNAQGKKTDYQIVGQSEAPGH*
Ga0074046_100050568	3300010339	Bog Forest Soil	VLALAAVTVAADVYQTGKIVKWDNGTYPQGDHKTKAWIVYQVQGDNLLYSIARHKETKAQMEPGEQVQYHVKGNQMTVVNAKGKKEKYQIVGQSQAPGQ*
Ga0074046_100357232	3300010339	Bog Forest Soil	VRKTAFALVVTLLLTAFAVAADTYQTGKIVKWENGTYPDGKKTKAWIVYQVQGDNLLYSIARHKETKAQMQPGETVQYEVKGNDMTVINAKGKKTKYQVVGQSQAPSPMPTQ*
Ga0074046_100763202	3300010339	Bog Forest Soil	VKKTAFALLITLLLTSFAVAADTYQTGKIVKWDNGTYPDGKKTKAWIVYQMQGDNMLYSIARHKESKPQMEPGEQVQYHVKGNQMTLVSAKGKKNNYQIVGQSQAPGQ*
Ga0074046_101146652	3300010339	Bog Forest Soil	VKKISFALLLILSLSCLAVAADVYQTGKVVKWDNGTYPQGDHKTKAWIVYQVQGDNNMLYSIARHKETKPQMEPGETVQYQAKGNQMMVVNAKGKKEKYQIVGQSQAPGQ*
Ga0074046_106288141	3300010339	Bog Forest Soil	VRKPAFALLITLLLTSFAVAADTYQTGKIVKWDNGTYPDGKKSKGWVVYQVQGDNMLYSIARHKETKPQMQPGEPVQYEVKGNKMTVVSAKGKKETYQIVGQSQAAGQ*
Ga0074045_100837943	3300010341	Bog Forest Soil	DTVRKTAFALVITLFLTAFAVAADTYQTGKIVKWDNGTYPDGKKTKAWIVYQVQGDNLLYSIARHKETKAQMQPGETVQYEVKGNDMTVINAKGKKTKYQVVGQSQAPSPMPTQ*
Ga0074045_101211153	3300010341	Bog Forest Soil	VKKTAFALLITLLLTGFAVAADTYQTGRIVKWDKGTYPDGKKTKAWIVYQVQGDNLLYSVARHKETKPQMEPGEAVQYQVKGNQMTLVSAKGKKNNYQIVGQSQAPGQ*
Ga0074045_101627541	3300010341	Bog Forest Soil	VRKIAFALVITLLLASFAVAADTYQAGKVVKWDNGTYPDGKKTKAWIVYQVQGDNILYSIARHKETKPQMQPGEAIQYLVKGNKMDVVNAKGKKNNYQVVGQSQAPGQ*
Ga0074045_101999642	3300010341	Bog Forest Soil	VRKPAFALLITLLLTSFAVAADTYQTGKIVKWDNGTYPDGKKTKAWIVYQMQGDNMLYSIARHKDTKPQMEPGEQVQYHVKGNQITVVSAKGKKNNYQIVGQSQAPGQ*
Ga0074045_108285201	3300010341	Bog Forest Soil	LMRKTAFALLITLLLTSFAVAADTYQTGKIVKWDNGTSPDGKQNKPWIVYQVQGGNMLYSVARHKETKAQMEPGEQVQYQVKGNQMTVVSAKGKKNNYQIVGQSQATGQ*
Ga0074044_111036692	3300010343	Bog Forest Soil	MRKTAFILLLTLLLAAFAVAADTYQTGKVVKWDNGSYPDGKKTKPWIVYQVQGDSMLYSVARHKENKPRMQPGDAVQYEVKGNKMTVVNAKGK
Ga0126381_1013811092	3300010376	Tropical Forest Soil	MSAVAVAGTPYLNGKIVKWENGTYPDGKKTKSWVVYQLQTDSSSYSIARKKETKPQMQAGEAVQYQMKNNANVEVVNAKGKKNQYQIVGQSQTQ*
Ga0126381_1037132642	3300010376	Tropical Forest Soil	MVLKRPALALLIAMLLPAIAVAADMYQTGRIVKWDNGSYPDGKKTKSWIVYQVQGDGMVYSVARHKETKPQMQPGDSVQYQIKGSQMTLINAKGKKNNYQVVGQSQAPQ*
Ga0136449_10001031110	3300010379	Peatlands Soil	MLSFRGDPVRKTALALLVTFLLTGFAAAADTFQAVKVVKWENGTYPQGDHKTKAWIVYQVQSDNMLYSIARHKETKPKMQPGEPVQFRAKGNQMTVVNAQGKKTDYQIVGQSEAPGH*
Ga0136449_1026792702	3300010379	Peatlands Soil	VRKVAFALLLILSLSCLAVADDVYQSGKVVKWDNGTYPDGKKTKAWIVYQVQGDNMLYSIARHKETKPQMQPGDAVQYHVKGNQITVIDGSRKDKYQIVGQSQAPGQ*
Ga0181530_101533793	3300014159	Bog	VRKVAFALLLILSLSCLAVADDVYQPGKIVKWDNGTYPQGDHKTKAWIVYQVQGDNLLYSIARHKETKAQMEPGEQVQYHVKGNQMTVVNARGKKEKYQIVGQSQAPQ*
Ga0181532_105254472	3300014164	Bog	VLSAVAIAVDAYQTGKVVKWDNGTYPDGKKTKAWIVYQVQGDNMLYSVARHKETKPEMQPGDAVQYEVKGNKMTVVNAKGKKETYQIVGQSQAAGQ*
Ga0181523_100267573	3300014165	Bog	LITLLLTTVAIAADNYQTGKIVKWDNGTYPDGKKTKAWIVYQVQGDNMLYSVARHKETKPEMQPGDAVQYEVKGNKMTVVNAKGKKETYQIVGQSQAAGQ*
Ga0181526_103436431	3300014200	Bog	NGDAVRRTALLLITLLLTTVAIAADNYQTGKIVKWDNGTYPDGKKTKAWIVYQVQGDNMLYSVARHKETKPEMQPGDAVQYEVKGNKMTVVNAKGKKETYQIVGQSQAAGQ*
Ga0182035_104474832	3300016341	Soil	MAKPSESRDLRFLNLVTLGDDVRKTAFVLVITLLLTAVAVAADTYQTGKIVKWDNGTYPDKKKMKPWIVYEVQGDSLVYSIAHKKETKPQMQPGETVQYELKGDKMTVINAKGKKETYQVVGQAQAANPAPAQ
Ga0182032_110345101	3300016357	Soil	RTLEKTALKKFVSALLMAVLLAAGAVAADIYQTGKIVKWDNGNYPDGKKTKNWMVYQVQGDSMLYSIARHKETKPQMQPGDIVRYDVKGNQMTLINAKGKKNNYQIVGQSQAGQ
Ga0182034_112092442	3300016371	Soil	SHLQHMQGTRSTSHGTFIIQVFRSRTLEKTALKKFVSALLMAVLLAAGAVAADIYQTGKIVKWDNGNYPDGKKTKNWMVYQVQGDSMLYSIARHKETKPQMQPGDIVRYDVKGNQMTLINAKGKKNNYQIVGQSQAGQ
Ga0181505_104581212	3300016750	Peatland	VRKVAFALLLILSLSCLAVADDVYQPGKIVKWDNGTYPQGDHKTKAWIVYQVQGDNLLYSIARHKETKAQMEPGEQVQYHVKGNQMTVVNARGKKEKYQIVGQSQAPQ
Ga0187814_104092511	3300017932	Freshwater Sediment	VRKTAFVVLITLLLSAIAIAADAYQTGKIVKWDNGTYPDGKKTKAWIVYQVQGDNLVYSIARHKENKAQMQPGDAVQYQVKGNKMTVVNAKGKKETYQIVGQSQAPGQ
Ga0187817_104028712	3300017955	Freshwater Sediment	VRKTAFVVLITLLLSAIAIAADAYQTGKIVKWDNGTYPDGKKTKAWIVYQVQGDNLVYSIARHKENKAQMQPGDAVQYQVKGNKMTVVNAKGKKETYQIVGQSQAPGQGQ
Ga0187817_107593212	3300017955	Freshwater Sediment	VKKTAFALLIALLLASFAVAADTYQSGKIVKWDKGTYPEKKKTKPWIVYQVQGDNMLYSIARHKETKPQMQPGDAVQYEVKGNKMTVVNAKGKKNDYQIVGQSQAAGQ
Ga0187783_100057589	3300017970	Tropical Peatland	MRKIALALVITMLLTNIAFAADVYQSGKIVKWDKGTYPDKNKTKAWIVYQVEGDNAMLYSIARHKETKPQMQPGEAVQYFVKGNKMAVVNARGKKENYQIVGQAQAAEQ
Ga0187783_113426051	3300017970	Tropical Peatland	MRKTAFVLLMTFFLSALAVAADTYQTGKIVKWDNGTYPDKKKTKTWVVYQLQGDNNMTYSIARHKETKPQMQPGDSVQYEVKGNKVTVVNAKGKKETYQIV
Ga0187781_103806582	3300017972	Tropical Peatland	MRKVAFVLLITLALSTLAIAADTFQTGKIVKWDNGTYPDKKKTKSWVVYQVQGDDLVYSVARKKETKPQMQPGETVQYEVKGHKMTVVNAKGKKETYQIVGQSQAAGQ
Ga0187804_100661913	3300018006	Freshwater Sediment	VRKTAFVVLITLLLSAIAIAADAYQTGKIVKWDNGTYPDGKKTKAWIVYQVQGDNLVYSIARHKENKAQMQPGDAVQYQVKGNKMTVVNA
Ga0187784_107039701	3300018062	Tropical Peatland	ITMLLTNIAFAADVYQSGKIVKWDKGTYPDKNKTKAWIVYQVEGDNAMLYSIARHKETKPQMQPGEAVQYFVKGNKMAVVNARGKKENYQIVGQAQAAEQ
Ga0187772_103097842	3300018085	Tropical Peatland	VRKTCFVVLMTILLSGFAVTADTYYQAGKVVKWENGTYPQGDHKTKAWIVYQVQSDKMFYSIARHKETKPKMEPGEQLQFRVKGTQMTVVNAQGKKTQYQIIGQSEATGQ
Ga0187769_103966802	3300018086	Tropical Peatland	MRKTAFVLLITFALSAVAIAADTYQTGKIVKWDNGTYPDKKKTKPWVVYQVQGDNLVYSVARKKETKPQTQPSETVQYEVKGNKMTVVNAKGKKETYQIVGQSQAAAQ
Ga0187769_112208121	3300018086	Tropical Peatland	MAVAADVYQTGKVVKWDNGTYPDKKKTKTWVVYQVQGDNMVYSIARHKETKPQMQPGDAVQYEVKGNKMTVVNAKGKKESYQIVGQAQAPGQ
Ga0207927_10025274	3300025579	Arctic Peat Soil	VRKIAFALLITLLLSCLAVAADTYKTGQIVKWDKGTYPQGDHKTKAWIVYQVQGDNMFYSIARHKETKPQMEPGEQVQYHVKGNQMKVVNAKGKKTEYQIVGQAQAPGQ
Ga0207826_10659361	3300027680	Tropical Forest Soil	VRKTAFALLITLLLATLAVAADTYQTGKVVKWDNGTYPDGKKTKAWIVYQVQGGGDNMLYSIARHKETKPQMEPGEQVQYQVKGNQMTVVNAKGKKNNYQIVGQSQAPAQ
Ga0209446_10014752	3300027698	Bog Forest Soil	VKKTAFVLLISLLLTAFAAAADTYQTGKVVKWDNGTYPDKKKTKNWIVYQVQGENLVYSIARHKETKPQMQPGETVQYEVKGNKVTVIDAKGKKTTYQLVGQAEVPSQAPAQ
Ga0209446_10040054	3300027698	Bog Forest Soil	VRKAALALLVTSLLTGFAVAADTYQAGKVVKWENGTYPQGDHKTKSWIVYQVQSDNMLYSIARHKETKPKMQPGEPVQFRAKGNQMTVVNAQGKKTEYQIVGQSEAPGH
Ga0209656_100019409	3300027812	Bog Forest Soil	MSLLLTTLTVAADTYQTGKVVKWDNGTYPDGKKTKAWIVYQVQGDNNMLYSIARHKETKPQMQPGDAVQYQVKGNKMTVVDAKGKKNDYQIVGQSQALGQ
Ga0209656_100053143	3300027812	Bog Forest Soil	VRKTAFVLLITLALSAVAIAADTYQTGKVVKWDDGTYPDKKKTKPWVVYQVQGDNLLYSIARHKETKPQMQPGEAVQYEVKGSKMTVVNAKGKKNDYQIVGQSQAAGQ
Ga0209656_100153182	3300027812	Bog Forest Soil	VRKTAFALLITLLLTAVAVAADTYQTGKIVKWDNGTYPDGKKTKAWIVYQVQGDNLLYSIARHKETKAQMEPGDTVQYELKGNKMTVVNAKGKKETYQVVGQAQAASPAPAQ
Ga0209656_100328763	3300027812	Bog Forest Soil	VRKIAFALLLILSLSWLALAADTYQTGKIVKWDNGTYPDGKKTKDWIVYQVQGDNLLYSIARHKETKAQMEPGETVQYQVKGNQMTVVNAKGKKNNYQIVGQSQAPGQ
Ga0209656_100982772	3300027812	Bog Forest Soil	MTLLLSCLALAADTYQTGKVVKWDNGTYPQGDHKTKSWIVYQVQGDNMLYSIARHKETKPQMEPGEQVQYHIKGNQMTVVNAKEKKNNYQIVGQSQAAGQ
Ga0209656_101595432	3300027812	Bog Forest Soil	VRKTAFALVITLFLTAFAVAADTYQTGKIVKWDNGTYPDGKKTKAWIVYQVQGDNLLYSIARHKETKAQMQPGETVQYEVKGNDMTVINAKGKKTKYQVVGQSQAPSPMPTQ
Ga0209656_103566921	3300027812	Bog Forest Soil	MRKTAFVLLITLLLSPIAIAADTYQTGKIVKWDDGTYPDKKKTKPWVVYQVQGDNLLYSIARHKETKPQMQPGEPVQYEVKGNKMTVVSAKGKKETYQIVGQSQAAGQ
Ga0209040_100256533	3300027824	Bog Forest Soil	MTLLLSCLALAADTYQTGKVVKWDNGTYPQGDHKTKSWIVYQVQGDNMLYSIARHKETKPQMEPGEQVQYHVKGNQMTVVNAKEKKNNYQIVGQSQAAGQ
Ga0209040_101009323	3300027824	Bog Forest Soil	VRKIAFALLLILSLSWLALAADTYQTGKIVKWDNGTYPDGKKTKDWIVYQVQGDNLLYSIARHKETKAQMEPGETVQYQVKGNQMTVV
Ga0209040_101333052	3300027824	Bog Forest Soil	VRKTAFVLLITLALAAVAVGADVYQTGKVVKWDNGTYPDGKKTKAWIVYQLQGDNLLYSIARHKETKAQMEPGEAVQYEVKGNQMTVVNARGKKEKYQIVGQSQVPGQ
Ga0209040_102027582	3300027824	Bog Forest Soil	MRKTAFVLLITLLLSPIAIAADTYQTGKIVKWDDGTYPDKKKTKPWVVYQVQGDNLLYSIARHKETKPQMQPGEPVQYEVKGNKMTVVSAKGKKNDYQIVGQSQAAGQ
Ga0209040_102154171	3300027824	Bog Forest Soil	MRKTAFVLLITLALSAVAIAADTYQTGKVVKWDNGTYPDGKKTKAWIVYQVQGDNNMLYSVARHKETKPQMQPGDAVQYEVKGSKITVVNAKGKKETYQIVGQSQAAGQ
Ga0209040_104600671	3300027824	Bog Forest Soil	VRKTAFVLLIVLALAAVTVAADVYQTGKIVKWDNGTYPQGDHKTKAWIVYQVQGDNLLYSIARHKETKAQMEPGEQVQYHVKGNQMTVVNAKGKKEKYQIVGQSQAPGQ
Ga0209039_100047837	3300027825	Bog Forest Soil	VAADTYQTGKIVKWENGTYPDGKKTKAWIVYQVQGDNLLYSIARHKETKAQMQPGETVQYEVKGNDMTVINAKGKKTKYQVVGQSQAPSPMPTQ
Ga0209048_100041496	3300027902	Freshwater Lake Sediment	MKKTAFVLLFTMLLTGLAVAADTYSPGKIVKWENGNYPDGNKTKGWIIYQVQGDNMLYSIARHKETKPKMQPGDAVQYHVKGSEMTVINAQNKKEKYQIVGQSQAPAPPAQ
Ga0209698_107342241	3300027911	Watersheds	RRPEGLLYRQLEAPLRKTAFVLLMTLLLTAFAVAADTYQTGKVVKWDNGSYPDGKKTKAWIVYQVQGDNMLYSIARHKETKPQMQPGDAVQYFVKGNQMTVEAKGKKTKYEIVGQQQAPA
Ga0265338_106366232	3300028800	Rhizosphere	MRKTAFVLLMTLLLTALAVAADTYQTGKVVKWDKGTYPDGKKTKAWIVYQMQGDNMLYSIARHKETKPQMQPGESVQYHLKGTQIAVINGKGKKTEYQIVGQSQAPAQ
Ga0310037_101290102	3300030494	Peatlands Soil	VRKTALALLVTFLLTGFAAAADTFQAGKVVKWENGTYPQGDHKTKAWIVYQVQSDNMLYSIARHKETKPKMQPGEPVQFRAKGNQMTVVNAQGKKTDYQIVGQSEAPGH
Ga0265313_100148675	3300031595	Rhizosphere	DTYQTGKVVKWDKGTYPDGKKTKAWIVYQMQGDNMLYSIARHKETKPQMQPGESVQYHLKGTQIAVINGKGKKTEYQIVGQSQAPAQ
Ga0306924_107682001	3300032076	Soil	LAAGAVAADIYQTGKIVKWDNGNYPDGKKTKNWIVYQVQGDSMLYSIARHKETKPQMQPGDIVRYDVKGNQMTLINAKGKKNNYQIVGQSQAGQ
Ga0306920_1005982322	3300032261	Soil	AVAADIYQTGKIVKWDNGNYPDGKKTKNWIVYQVQGDSMLYSIARHKETKPQMQPGDIVRYDVKGNQMTLINAKGKKNNYQIVGQSQAGQ
Ga0335085_100499976	3300032770	Soil	VRTTALVLLITLALSAFAFSADTYQTGKIVKWDNGTYPDKKKNKPWIVYQVQGDSLIYSVARKKETKPQMQPGETVQYEMKGNKMTVVNAKGKKETYQIVGQAQAAGQ
Ga0335085_107795332	3300032770	Soil	VRKTAFVLLMVVALAAISVAADIYQTGKIVKWDNGTYPDGKKTKGWIVYQVQGDNNTLYSVARHKETKPQMQPGDTVQYQVKGAQITIEDKGKKTKYQIVGQAQATGQ
Ga0335085_110647382	3300032770	Soil	VRKTAFALVIMLLLTAFAAAADVYQSGKVVKWDKGTYPDGKKTKPWIVYQVQGDTMVYSIARKKESKPQMQPGDPVQYFVKGNQMKVETAAGKKTEYQ
Ga0335085_117464252	3300032770	Soil	ALAADTFQTGKIVKWDNGTYPDGKKTKTWVVYQVQGDNLLYSIARKKESKPQMQPGDTVQYQVKGNQMTVDDKGKKNKYQIVGQQQATGQ
Ga0335082_100028161	3300032782	Soil	MTLALSTLAIAADTFQTGKIVKWDNGTYPDGKKTKSWIVYQLQGDNNMLYSVARKKETKPQMQPGEAVQYEVKGNKITLISAKGKKNDYQVVGQSQAPAQ
Ga0335082_101558401	3300032782	Soil	MVVALAAISVAADIYQTGKIVKWDNGTYPDGKKTKGWIVYQVQGDDNTLYSVARHKETKPQMQPGDTVQYQVKGAQITIEDKGKKTKYQIVGQAQATGQ
Ga0335082_107942851	3300032782	Soil	FMTLALSTLAIAADTFQTGKIVKWDNGTYPDGKKTKSWIVYQVQGDNNMLYSVARKKETKPQMQPGEAVQYEVKGNKMTLISAKGKKNDYQVVGQSQAPPAQ
Ga0335078_110919902	3300032805	Soil	MRKTAVALLIMIALSATAMAADTFQTGKIVKWDNGTYPDGKKTKAWIVYQVQGDNLLYSIARKKETKPKMQPGDTVQYQVKGNQMTVDDNGKKNKYQIVGQSQATGQ
Ga0335080_102381082	3300032828	Soil	VRKTACALLITLLLTALAVAADTFQTGKIVKWDNGTYPDGKKTKTWVVYQVQGDNLLYSIARKKESKPQMQPGDTVQYQVKGNQMTVDDKGKKNKYQIVGQQQATGQ
Ga0335080_116867181	3300032828	Soil	VRKTALVLVITMLLAILSFAAEAYQNGKVVKWDNGTYPDGKKTKAWIVYQVQGENMLYSVARHKETKPQMQPGEAVQYEVKGNKMTVVNAKGKKESYQIVGQSQAAAQ
Ga0335081_111249892	3300032892	Soil	LKKTIAIILMTLLLAAMSIAADVYQTGKVVKWENGSYPDGKKTKAWIVYQIQGDNMLYSIARHKESKPQMQPGDSVQYEVKGAQMKVVRANGKKADYQIVGQSQATGQ
Ga0335069_105154491	3300032893	Soil	MGRRSRRTPIIGELVPYPKGDAVRTTALVLLITLALSAFAFSADTYQTGKIVKWDNGTYPDKKKNKPWIVYQVQGDSLIYSVARKKETKPQMQPGETVQYEMKGNKMTVVNAKGKKETYQIVGQAQAAGQ
Ga0335069_105504171	3300032893	Soil	VRKPACALLITLLLTTLALAADTFQTGKIVKWDNGTYPDGKKTKTWVVYQVQGDNLLYSIARKKESKPQMQPGDTVQYQVKGNQMTVDDKGKKNKYQIVGQQQATGQ
Ga0335076_104332841	3300032955	Soil	VRKTACALLITLLLTALAVAADTFQTGKIVKWDNGTYPDGKKTKTWVVYQVQGDNLLYSIARKKESKPQMQPGDTVQYQVKGNQMTVDDKGKKNKYQ
Ga0335084_103418321	3300033004	Soil	VRKTAFVLLMVVALAAISVAADIYQTGKIVKWDNGTYPDGKKTKGWIVYQVQGDDNTLYSVARHKETKPQMQPGDTVQYQVKGAQITIEDKGKKTKYQ
Ga0335084_109055931	3300033004	Soil	VRKTAYALLITLLLSTLAVAADTLQNGKIVKWDNGTYPDGKKTKSWIVYQVQGEDNMVYTVARKKETKPQMQPGDTVKYYVKGNQMTLVNSKGQKNNYQVVGQQQAAAQ
Ga0335077_100276954	3300033158	Soil	MRKTAFVLLMTFVLSAVAVAADTFQTGKIVKWDNGTYPEKKKTKSWVVYQVQGDNLLYSVARKKETKPQMQPGETVQYEVKGHKMTVVNAKGKKETYQIVGQSQAPGQ
Ga0335077_102438862	3300033158	Soil	MRKTAFVLLVTLALAAVAVAADNYQNGKVVKWDNGNYPDGKKTKAWIVYQLQGDNNMLYSIARHKETKPQMQPGDAVQYEVKGNKMTVVNAKGKKNDYQIVGQSQAPGQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F102944

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences