NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F102978

Metagenome Family F102978

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F102978
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 55 residues
Representative Sequence MIKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLNL
Number of Associated Samples 69
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 7.92 %
% of genes near scaffold ends (potentially truncated) 32.67 %
% of genes from short scaffolds (< 2000 bps) 74.26 %
Associated GOLD sequencing projects 53
AlphaFold2 3D model prediction Yes
3D model pTM-score0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (67.327 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(51.485 % of family members)
Environment Ontology (ENVO) Unclassified
(71.287 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(87.129 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 54.76%    β-sheet: 0.00%    Coil/Unstructured: 45.24%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.72
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
e.8.1.1: DNA polymerase Id3ncia23nci0.84767
a.25.1.0: automated matchesd4a25a_4a250.80716
f.38.1.0: automated matchesd6gs4a_6gs40.80486
a.25.1.1: Ferritind1z6oa11z6o0.79508
a.25.1.0: automated matchesd2c41a_2c410.79024


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF08299Bac_DnaA_C 2.97
PF09588YqaJ 2.97
PF02867Ribonuc_red_lgC 2.97
PF01555N6_N4_Mtase 1.98
PF12684DUF3799 1.98
PF08774VRR_NUC 1.98
PF00072Response_reg 0.99
PF02502LacAB_rpiB 0.99
PF00149Metallophos 0.99
PF09834DUF2061 0.99
PF11645PDDEXK_5 0.99
PF06356DUF1064 0.99
PF16363GDP_Man_Dehyd 0.99
PF00271Helicase_C 0.99
PF02777Sod_Fe_C 0.99
PF00627UBA 0.99
PF04404ERF 0.99
PF12518DUF3721 0.99
PF01844HNH 0.99
PF04466Terminase_3 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0209Ribonucleotide reductase alpha subunitNucleotide transport and metabolism [F] 2.97
COG0593Chromosomal replication initiation ATPase DnaAReplication, recombination and repair [L] 2.97
COG0863DNA modification methylaseReplication, recombination and repair [L] 1.98
COG1041tRNA G10 N-methylase Trm11Translation, ribosomal structure and biogenesis [J] 1.98
COG2189Adenine specific DNA methylase ModReplication, recombination and repair [L] 1.98
COG0605Superoxide dismutaseInorganic ion transport and metabolism [P] 0.99
COG0698Ribose 5-phosphate isomerase RpiBCarbohydrate transport and metabolism [G] 0.99
COG1783Phage terminase large subunitMobilome: prophages, transposons [X] 0.99


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A67.33 %
All OrganismsrootAll Organisms32.67 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000116|DelMOSpr2010_c10019029Not Available3379Open in IMG/M
3300000116|DelMOSpr2010_c10094741Not Available1142Open in IMG/M
3300000117|DelMOWin2010_c10007797Not Available6278Open in IMG/M
3300000117|DelMOWin2010_c10024274All Organisms → Viruses → Predicted Viral3086Open in IMG/M
3300000117|DelMOWin2010_c10089928Not Available1162Open in IMG/M
3300000117|DelMOWin2010_c10138469Not Available822Open in IMG/M
3300000117|DelMOWin2010_c10140771Not Available811Open in IMG/M
3300000117|DelMOWin2010_c10142624Not Available803Open in IMG/M
3300000117|DelMOWin2010_c10192012Not Available635Open in IMG/M
3300000117|DelMOWin2010_c10218544Not Available575Open in IMG/M
3300006026|Ga0075478_10152493Not Available720Open in IMG/M
3300006026|Ga0075478_10158619Not Available703Open in IMG/M
3300006026|Ga0075478_10173639Not Available665Open in IMG/M
3300006793|Ga0098055_1151597Not Available892Open in IMG/M
3300006802|Ga0070749_10032668Not Available3236Open in IMG/M
3300006802|Ga0070749_10039969All Organisms → Viruses → Predicted Viral2887Open in IMG/M
3300006802|Ga0070749_10302009Not Available897Open in IMG/M
3300006810|Ga0070754_10071985All Organisms → Viruses → Predicted Viral1763Open in IMG/M
3300006810|Ga0070754_10222217Not Available872Open in IMG/M
3300006810|Ga0070754_10353960Not Available649Open in IMG/M
3300006868|Ga0075481_10303206Not Available557Open in IMG/M
3300006916|Ga0070750_10001885All Organisms → Viruses11666Open in IMG/M
3300006916|Ga0070750_10029061All Organisms → Viruses → Predicted Viral2755Open in IMG/M
3300006916|Ga0070750_10119398All Organisms → Viruses → Predicted Viral1210Open in IMG/M
3300006919|Ga0070746_10102045All Organisms → Viruses → Predicted Viral1429Open in IMG/M
3300006990|Ga0098046_1008984All Organisms → Viruses → Predicted Viral2779Open in IMG/M
3300007344|Ga0070745_1323688Not Available545Open in IMG/M
3300007345|Ga0070752_1002349Not Available12332Open in IMG/M
3300007345|Ga0070752_1272091Not Available652Open in IMG/M
3300007538|Ga0099851_1247253Not Available639Open in IMG/M
3300007539|Ga0099849_1006503Not Available5318Open in IMG/M
3300007539|Ga0099849_1132292All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium975Open in IMG/M
3300007540|Ga0099847_1250561Not Available508Open in IMG/M
3300007640|Ga0070751_1226528Not Available718Open in IMG/M
3300008448|Ga0114876_1247208Not Available556Open in IMG/M
3300009001|Ga0102963_1032946Not Available2163Open in IMG/M
3300009001|Ga0102963_1330994Not Available598Open in IMG/M
3300010296|Ga0129348_1002709Not Available6461Open in IMG/M
3300010316|Ga0136655_1111691Not Available823Open in IMG/M
3300010368|Ga0129324_10428088Not Available509Open in IMG/M
3300010392|Ga0118731_107271179All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes710Open in IMG/M
3300017742|Ga0181399_1031516All Organisms → Viruses → Predicted Viral1435Open in IMG/M
3300017749|Ga0181392_1156884All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium665Open in IMG/M
3300017770|Ga0187217_1028659All Organisms → Viruses → Predicted Viral1975Open in IMG/M
3300017818|Ga0181565_10109353All Organisms → Viruses → Predicted Viral1954Open in IMG/M
3300017818|Ga0181565_10250009All Organisms → Viruses → Predicted Viral1203Open in IMG/M
3300017949|Ga0181584_10002442Not Available14258Open in IMG/M
3300017951|Ga0181577_10247772Not Available1173Open in IMG/M
3300017985|Ga0181576_10004191Not Available10480Open in IMG/M
3300017986|Ga0181569_10860127Not Available591Open in IMG/M
3300018417|Ga0181558_10376137Not Available758Open in IMG/M
3300019708|Ga0194016_1014605Not Available839Open in IMG/M
3300019745|Ga0194002_1024044Not Available848Open in IMG/M
3300019765|Ga0194024_1008921All Organisms → Viruses → Predicted Viral2085Open in IMG/M
3300020439|Ga0211558_10288497Not Available770Open in IMG/M
3300021356|Ga0213858_10007640All Organisms → Viruses5099Open in IMG/M
3300021373|Ga0213865_10000163Not Available43764Open in IMG/M
3300021373|Ga0213865_10254339Not Available840Open in IMG/M
3300021375|Ga0213869_10002837Not Available11806Open in IMG/M
3300021378|Ga0213861_10028762All Organisms → Viruses → Predicted Viral3783Open in IMG/M
3300021964|Ga0222719_10765411Not Available536Open in IMG/M
3300022057|Ga0212025_1080706Not Available559Open in IMG/M
3300022061|Ga0212023_1046146Not Available606Open in IMG/M
3300022168|Ga0212027_1024420Not Available815Open in IMG/M
3300022183|Ga0196891_1096630Not Available520Open in IMG/M
3300022187|Ga0196899_1093770Not Available900Open in IMG/M
3300022187|Ga0196899_1134789Not Available699Open in IMG/M
3300022187|Ga0196899_1181756Not Available566Open in IMG/M
3300022934|Ga0255781_10015249All Organisms → cellular organisms → Bacteria5088Open in IMG/M
3300023084|Ga0255778_10002356Not Available16349Open in IMG/M
3300023108|Ga0255784_10549775Not Available516Open in IMG/M
3300024236|Ga0228655_1007543All Organisms → Viruses → Predicted Viral2944Open in IMG/M
3300024326|Ga0228652_1056700Not Available996Open in IMG/M
3300024329|Ga0228631_1002266Not Available8933Open in IMG/M
3300025084|Ga0208298_1007675All Organisms → Viruses → Predicted Viral2829Open in IMG/M
3300025543|Ga0208303_1035518All Organisms → Viruses → Predicted Viral1296Open in IMG/M
3300025630|Ga0208004_1039442All Organisms → Viruses → Predicted Viral1328Open in IMG/M
3300025653|Ga0208428_1094947Not Available846Open in IMG/M
3300025671|Ga0208898_1046399All Organisms → Viruses → Predicted Viral1616Open in IMG/M
3300025671|Ga0208898_1133564Not Available696Open in IMG/M
3300025674|Ga0208162_1054587Not Available1324Open in IMG/M
3300025674|Ga0208162_1078774All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1024Open in IMG/M
3300025759|Ga0208899_1035733All Organisms → Viruses → Predicted Viral2275Open in IMG/M
3300025759|Ga0208899_1076372Not Available1321Open in IMG/M
3300025759|Ga0208899_1086281All Organisms → Viruses → Predicted Viral1209Open in IMG/M
3300025759|Ga0208899_1142049Not Available833Open in IMG/M
3300025769|Ga0208767_1017307Not Available4144Open in IMG/M
3300025769|Ga0208767_1074657All Organisms → Viruses → Predicted Viral1453Open in IMG/M
3300025769|Ga0208767_1119108All Organisms → Viruses → Predicted Viral1017Open in IMG/M
3300025810|Ga0208543_1164641Not Available515Open in IMG/M
3300025840|Ga0208917_1041655All Organisms → Viruses → Predicted Viral1854Open in IMG/M
3300025853|Ga0208645_1069407All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1582Open in IMG/M
3300025853|Ga0208645_1281734Not Available533Open in IMG/M
3300025889|Ga0208644_1099998All Organisms → Viruses → Predicted Viral1430Open in IMG/M
3300026483|Ga0228620_1081869Not Available681Open in IMG/M
3300032136|Ga0316201_11675997Not Available525Open in IMG/M
3300032277|Ga0316202_10109232All Organisms → Viruses → Predicted Viral1281Open in IMG/M
3300034374|Ga0348335_120878Not Available776Open in IMG/M
3300034375|Ga0348336_151551Not Available688Open in IMG/M
3300034375|Ga0348336_175493Not Available604Open in IMG/M
3300034418|Ga0348337_041551Not Available1962Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous51.49%
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh9.90%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine9.90%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater8.91%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine2.97%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient2.97%
SeawaterEnvironmental → Aquatic → Marine → Strait → Unclassified → Seawater2.97%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment1.98%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water1.98%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.99%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater0.99%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine0.99%
Microbial MatEnvironmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat0.99%
Worm BurrowEnvironmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow0.99%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.99%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300000117Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010EnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006793Marine viral communities from the Subarctic Pacific Ocean - 17_ETSP_OMZ_AT15314 metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006868Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300006990Marine viral communities from the Subarctic Pacific Ocean - 11B_ETSP_OMZ_AT15265_CsCl metaGEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300017742Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21EnvironmentalOpen in IMG/M
3300017749Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15EnvironmentalOpen in IMG/M
3300017770Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 15 SPOT_SRF_2010-09-15 (version 2)EnvironmentalOpen in IMG/M
3300017818Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017951Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017985Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017986Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018417Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019708Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? BRC_2-3_MGEnvironmentalOpen in IMG/M
3300019745Sediment microbial communities from the Broadkill River, Lewes, Delaware, United States ? FLT_8-9_MGEnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300020439Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021373Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO282EnvironmentalOpen in IMG/M
3300021375Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022057Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)EnvironmentalOpen in IMG/M
3300022061Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v2)EnvironmentalOpen in IMG/M
3300022168Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)EnvironmentalOpen in IMG/M
3300022183Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022934Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaGEnvironmentalOpen in IMG/M
3300023084Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaGEnvironmentalOpen in IMG/M
3300023108Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaGEnvironmentalOpen in IMG/M
3300024236Seawater microbial communities from Monterey Bay, California, United States - 67DEnvironmentalOpen in IMG/M
3300024326Seawater microbial communities from Monterey Bay, California, United States - 64DEnvironmentalOpen in IMG/M
3300024329Seawater microbial communities from Monterey Bay, California, United States - 39DEnvironmentalOpen in IMG/M
3300025084Marine viral communities from the Subarctic Pacific Ocean - 14B_ETSP_OMZ_AT15311_CsCl metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025653Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025674Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025840Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300026483Seawater microbial communities from Monterey Bay, California, United States - 23DEnvironmentalOpen in IMG/M
3300032136Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrowEnvironmentalOpen in IMG/M
3300032277Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotiteEnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034375Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
DelMOSpr2010_1001902923300000116MarineMIKVIAIFLLLKAVSNGIKLPQRGDKSIQDFIGHIVVESVMLIVHLYFGLWMLINL*
DelMOSpr2010_1009474153300000116MarineMIKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGVWMLLNL*
DelMOWin2010_1000779793300000117MarineMTKVIAIFLILKAVSNGIKLPQRGIAELLNREFIVHMIYESIMLIVHLYFGVWMLLNL*
DelMOWin2010_1002427443300000117MarineMIKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHMLVESIMLIVHLYFGVWMLLNL*
DelMOWin2010_1008992843300000117MarineMIKVIAIFLILKAVSNGIKIPQRGNDIGHILIELIMLIVHLYLGVWMLLNL*
DelMOWin2010_1013846933300000117MarineMIKVIAIFLILKAVSNGAKLPQRGSKTKNDFIGHILVESIMLIVHLYFGVWMLFNL*
DelMOWin2010_1014077133300000117MarineMIKIIAIFLILKAVSNGIKLPQRGNKTKNDFVGHILVESIMLIVHLYFGVWMLLNF*
DelMOWin2010_1014262433300000117MarineMIKVIAIFLILKAVSNGIKIPQRGNKSKNNFIGHMLIESVMLIVHLYLGVWMLLNL*
DelMOWin2010_1019201213300000117MarineMVEVIGIFLLLKAVSNAVKLTQRGNKSNNDFIGHIIVEGIMVIIHLFFGLWMLLNL*
DelMOWin2010_1021854443300000117MarineKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGVWMLINL*
Ga0075478_1015249333300006026AqueousMIKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHL
Ga0075478_1015861913300006026AqueousMIKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLNL*
Ga0075478_1017363933300006026AqueousFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGVWMLLNL*
Ga0098055_115159723300006793MarineMIKVIAIFLILKAVSNGIKLPQRGNKEKYDFIGHMLVEGIMLIIHMFFGIWMLLNL*
Ga0070749_1003266813300006802AqueousMTKVIAIFLILKAVSNAIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLNLC*
Ga0070749_1003996913300006802AqueousHQREMTKVIAIFLILKAVSNGIKLPQRGIAELLNREFIVHMIYESIMLIVHLYFGVWMLLNL*
Ga0070749_1030200933300006802AqueousMTKVIAIFLILKAVSNGIKLPQRGNKTKSDFIGHIIVESIMLIVHLYFGVWMLLNL*
Ga0070754_1007198553300006810AqueousMIKVIAIFLLLKAVSNGAKLPQRGNREKYDFIGHIIVESVMLIVHLYFGVWMLTNL*
Ga0070754_1022221733300006810AqueousMTKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLNLC*
Ga0070754_1035396013300006810AqueousNQREMIKVIGIFLILKAVSNGAKLPQRGNKTKNDFIGHILVESIMLMVHLYFGVWMLLNL
Ga0075481_1030320613300006868AqueousKVIAIFLILKAVSNGIKLPQRGIAELLNREFIVHMIYESIMLIVHLYFGVWMLLNL*
Ga0070750_1000188543300006916AqueousMIKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHMLVESVMLIVHLYFGVWMLLNL*
Ga0070750_1002906133300006916AqueousMTKVIAIFLILKAVSNGIKLPQRGNKTKSDFIGHIIVESIMLMVHLYFGVWMLLNL*
Ga0070750_1011939833300006916AqueousMIKVIAIFLLLKAVSNGIKLPQRGSKSNNDFIGHMLVEGIMLIIHMFFGIWMLLNL*
Ga0070746_1010204543300006919AqueousMIKVIAIFLILKAVSNGIKIPQRGNDIGHILVESIMLIVHLYFGVWMLTNL*
Ga0098046_100898413300006990MarineMIKVIAIFLILKAVSNGIKLPQRGNKEKYDFIGHMLVEGIMLIINMFFGIWMLLNL*
Ga0070745_132368823300007344AqueousEMIKIIAIFLILKAVSNGIKLPQRGSKSNNDFIGHMLVEGIMLIIHMFFGIWMLLNL*
Ga0070752_1002349103300007345AqueousFLILKAVSNGIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLNL*
Ga0070752_127209133300007345AqueousMIKVIAIFLLLKAVSNGAKLPQRGNREKYDFIGHIIVESVMLIVHLYFGVWMLLNL*
Ga0099851_124725333300007538AqueousMIKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHMLVESIMLIVHLYFGVWM
Ga0099849_1006503113300007539AqueousMIKVIAIFLILKAVSNGAKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLN
Ga0099849_113229213300007539AqueousQREMIKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGLWMLLNL*
Ga0099847_125056123300007540AqueousMTKVIAIFLLLKAVSNGIKLPQRGDKTNSDFIGHIIVEAIMLVVHFLFGLWMLINL*
Ga0070751_122652813300007640AqueousKVIAIFLLLKAVSNGIKLPQRGDKSIQDFIGHIVVESVMLIVHLYFGLWMLINL*
Ga0114876_124720833300008448Freshwater LakeMIKIIAIFLILKGISNGIKAPQRGGKNINDFIGQVVVEGIMLIIHTFFGLWMLINL*
Ga0102963_103294613300009001Pond WaterMKTVIAIFLILKAVSNGAKLPQTDTKSKNDFIGHMVVQGILLIVHLWFGVWMLLNL*
Ga0102963_133099413300009001Pond WaterMKTIIAIFLILKAVSNSLKLPQRGDKNQSEFIGHVVVESVMLILHLWFGIWILTNII*
Ga0129348_1002709173300010296Freshwater To Marine Saline GradientMIKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGLWMLLNL*
Ga0136655_111169123300010316Freshwater To Marine Saline GradientMTKVIGIFLILKALSNGIKMPQKGGRTKNDFIGHIVVEAVLLVAHLWFGIWMLTNL*
Ga0129324_1042808813300010368Freshwater To Marine Saline GradientMIKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGVWMLFNL*
Ga0118731_10727117933300010392MarineMTKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLNL*
Ga0181399_103151643300017742SeawaterMIKVIAIFLILKAVSNGIKLPQRSNKTKNDFIGHILVESIMLIVHLYFGVWMLLNL
Ga0181392_115688413300017749SeawaterMIKVIGIFLILKAVSNGVKLPQRGNKTKNDFIGHILVESIMLMVHLYFGV
Ga0187217_102865973300017770SeawaterMIKVIGIFLILKAVSNGVKLPQRGNKTKNDFIGHILVESIMLMVHLYFGVWMLLNL
Ga0181565_1010935343300017818Salt MarshMTKVIAIFLILKAVSNGIKLPQRGIAELLNREFIVHMIYESIMLIVHLYFGVWMLLNL
Ga0181565_1025000933300017818Salt MarshMTKVIAIFLLLKAVSNGIKLPQRGDKTNSDFIGHIIVEAIMLVVHFLFGLWMLINL
Ga0181584_10002442453300017949Salt MarshMIKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIIHLYFGVWMLLNL
Ga0181577_1024777223300017951Salt MarshMIKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLNLC
Ga0181576_1000419113300017985Salt MarshQREMTKVIAIFLILKAVSNGIKLPQRGIAELLNREFIVHMIYESIMLIVHLYFGVWMLLN
Ga0181569_1086012713300017986Salt MarshRELIKVIAIFLILKAVSNAIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLNLC
Ga0181558_1037613723300018417Salt MarshMIKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIIHLYFGVWML
Ga0194016_101460523300019708SedimentMIKVIAILLILKAVSNGIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLNL
Ga0194002_102404413300019745SedimentMIKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGVWMLLNL
Ga0194024_100892163300019765FreshwaterMTKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGVWMLLNL
Ga0211558_1028849733300020439MarineMIKVIAIFLLLKAVSNAVKLTQRSNKSKNDFIGHMLVELVMLITHMVFGLWMLANLPNQ
Ga0213858_1000764033300021356SeawaterMIKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHMLVESIMLIVHLYFGVWMLLNL
Ga0213865_10000163423300021373SeawaterMIEVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGLWMLLNL
Ga0213865_1025433933300021373SeawaterMVEVIGIFLLLKAVSNAVKLTQRGNKSNNDFIGHIIVEGIMVIIHLFFGLWMLLNL
Ga0213869_10002837133300021375SeawaterMKTLIAIFLILKAVSNGIKLPQRGKKSKNDFIGHMMFQHIMLIVHLWFGVWMLLNL
Ga0213861_1002876213300021378SeawaterMKTLIAIFLILKAVSNGIKLPQRGTKSKNDFIGHIMFQHIMLIVHLWFGVWMLLNL
Ga0222719_1076541123300021964Estuarine WaterMKTIIAIFLILKAVSNSLKLPQRGDKNQSEFIGHVVVESVMLILHLWFGIWILTNII
Ga0212025_108070623300022057AqueousMTKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLNLC
Ga0212023_104614613300022061AqueousEVIGIFLLLKAVSNAVKLTQRGNKSNNDFIGHIIVEGIMVIIHLFFGLWMLLNL
Ga0212027_102442023300022168AqueousREMIKIIAIFLILKAVSNGIKLPQRGSKSNNDFIGHMLVEGIMLIIHMFFGIWMLLNL
Ga0196891_109663013300022183AqueousHQREMIKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLNL
Ga0196899_109377033300022187AqueousMIKVIAIFLLLKAVSNGAKLPQRGNREKYDFIGHIIVESVMLIVHLYF
Ga0196899_113478923300022187AqueousMIKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHILVESVMLIVHLYFGVWMLLNL
Ga0196899_118175613300022187AqueousMIKIIAIFLILKAVSNGIKLPQRGSKSNNDFIGHIVIESIMLIVHLYFGVWMLTNL
Ga0255781_1001524913300022934Salt MarshMIKVIAIFLILKAVSNGIKLPQRGNKTKNNFIGHILVESIMLIVHLYFGVWM
Ga0255778_10002356393300023084Salt MarshMTKVIAIFLILKAVSNGIKLPQRGIAELLNREFIVHMIYESIMLIIHLYFGVWMLLNL
Ga0255784_1054977533300023108Salt MarshREMTKVIAIFLLLKAVSNGIKLPQRGDKTNSDFIGHIIVEAIMLVVHFLFGLWMLINL
Ga0228655_100754363300024236SeawaterMIKVIAIFLILKAVSNGIKLPQRGSKSNNDFIGHMLVEGIMLIIHMFFGIWMLLNL
Ga0228652_105670053300024326SeawaterIKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGVWMLLNL
Ga0228631_100226673300024329SeawaterMTKAIAIFLLLKAVSNGIKLPQRGSKSKNDFIGHMLVEGIMLIIHMFFGIWMLLNL
Ga0208298_100767523300025084MarineMIKVIAIFLILKAVSNGIKLPQRGNKEKYDFIGHMLVEGIMLIIHMFFGIWMLLNL
Ga0208303_103551823300025543AqueousMTKVIGIFLILKALSNGIKMPQKGGRTKNDFIGHIVVEAVLLVAHLWFGIWMLTNL
Ga0208004_103944223300025630AqueousMIKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGLWMLLNL
Ga0208428_109494743300025653AqueousKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGVWMLFNL
Ga0208898_104639963300025671AqueousMIKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGVWML
Ga0208898_113356413300025671AqueousMIKIIAIFLILKAVSNGIKLPQRGSKSNNDFIGHMLVEGIMLIIHMFFGIWMLLNL
Ga0208162_105458733300025674AqueousMTKVIAIFLILKAVSNGIKLPQRDNKTKNDFIGHMLVESIMLIVHLYFGVWMLLNL
Ga0208162_107877453300025674AqueousQREMIKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGLWMLLNL
Ga0208899_103573323300025759AqueousMTKVIAIFLILKAVSNGIKLPQRGNKTKSDFIGHIIVESIMLIVHLYFGVWMLLNL
Ga0208899_107637213300025759AqueousMIKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLNL
Ga0208899_108628123300025759AqueousMIKVIAIFLLLKAVSNGIKLPQRGSKSNNDFIGHMLVEGIMLIIHMFFGIWMLLNL
Ga0208899_114204913300025759AqueousMTKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHILVESIMLIVHLYFGVWMLLN
Ga0208767_101730793300025769AqueousMIKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHMLVESVMLIVHLYFGVWMLLNL
Ga0208767_107465733300025769AqueousMIKVIAIFLILKAVSNGIKIPQRGNDIGHILVESIMLIVHLYFGVWMLTNL
Ga0208767_111910813300025769AqueousIREMTKVIAIFLILKAVSNGIKLPQRGNKTKSDFIGHIIVESIMLIVHLYFGVWMLLNL
Ga0208543_116464113300025810AqueousLKAVSNGIKLPQRGSKSNNDFIGHMLVEGIMLIIHMFFGIWMLLNL
Ga0208917_104165533300025840AqueousMSKVIAIFLILKAVSNGIKLPQRGNKTKNDFIGHMVVESIMLIVHLYFGVWMLLNL
Ga0208645_106940763300025853AqueousMIKVIAIFLLLKAVSNGIKLPQRGDKSIQDFIGHIVVESVMLIVHLYFGLWMLINL
Ga0208645_128173423300025853AqueousQREMIKVIAIFLILKAVSNGIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGVWMLFNL
Ga0208644_109999813300025889AqueousMIKVIAIFLILKAVSNAIKLPQRGSKTKNDFIGHILVESIMLIVHLYFGVWMLLNLC
Ga0228620_108186933300026483SeawaterMIKVIAIFLILKAVSNGIKLPQRGSKSNNDFIGHMLVEGIMLIIHMFFGIWMLL
Ga0316201_1167599713300032136Worm BurrowMIKVIAIFLILKAVSNGIKIPQRGNDIGHILVESIMLIVHLYLGVWMLTNL
Ga0316202_1010923233300032277Microbial MatMIKAIAILLILKAVSNGIKLPQRGNKSIEDFIGHILIESIMLIVHLYFGVWMLLNL
Ga0348335_120878_3_1523300034374AqueousFLILKAVSNGIKLPQRGSKSNNDFIGHIVIESIMLIVHLYFGVWMLTNL
Ga0348336_151551_221_3913300034375AqueousMIKVIGIFLILKAVSNGAKLPQRGNKTKNDFIGHILVESIMLMVHLYFGVWMLLNL
Ga0348336_175493_4_1743300034375AqueousMIKVIAIFLLLKAVSNGAKLPQRGNREKYDFIGHIIVESVMLIVHLYFGVWMLTNL
Ga0348337_041551_656_8263300034418AqueousMTKVIAIFLTLKAVSNGIKLPQRDNKTKNDFIGHMLVESIMLIVHLYFGVWMLLNL


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