Metagenome Family F103033

Basic Information
Family ID	F103033
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	39 residues
Representative Sequence	MTRALLITNPAAARTDARAVTAIRDTLRRGGWSVDVLAT
Number of Associated Samples	87
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.00 %
% of genes near scaffold ends (potentially truncated)	98.02 %
% of genes from short scaffolds (< 2000 bps)	92.08 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Most Common Taxonomy
Group	Bacteria (98.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (22.772 % of family members)
Environment Ontology (ENVO)	Unclassified (36.634 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (49.505 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.36% β-sheet: 20.90% Coil/Unstructured: 50.75%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF04357	TamB	77.23
PF00781	DAGK_cat	0.99
PF01103	Omp85	0.99
PF07244	POTRA	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	77.23
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	1.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	86.14 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	5.94 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	86.14 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	5.94 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	86.14 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	5.94 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	86.14 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	5.94 %
Unclassified	root	N/A	1.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002561\|JGI25384J37096_10037761	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1878	Open in IMG/M
3300002908\|JGI25382J43887_10417753	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	567	Open in IMG/M
3300002911\|JGI25390J43892_10020368	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1595	Open in IMG/M
3300004153\|Ga0063455_100074228	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1286	Open in IMG/M
3300004480\|Ga0062592_100049237	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2273	Open in IMG/M
3300005406\|Ga0070703_10488348	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300005536\|Ga0070697_100806260	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	831	Open in IMG/M
3300005540\|Ga0066697_10352810	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	856	Open in IMG/M
3300005540\|Ga0066697_10428157	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	765	Open in IMG/M
3300005554\|Ga0066661_10792797	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	554	Open in IMG/M
3300005558\|Ga0066698_11077723	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	509	Open in IMG/M
3300005843\|Ga0068860_100714838	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1012	Open in IMG/M
3300006041\|Ga0075023_100316373	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	648	Open in IMG/M
3300006046\|Ga0066652_100238712	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1585	Open in IMG/M
3300006046\|Ga0066652_100354689	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1321	Open in IMG/M
3300006755\|Ga0079222_10385112	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	967	Open in IMG/M
3300006755\|Ga0079222_11116223	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	695	Open in IMG/M
3300006794\|Ga0066658_10688236	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	564	Open in IMG/M
3300006797\|Ga0066659_10163297	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1596	Open in IMG/M
3300006804\|Ga0079221_11156798	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	597	Open in IMG/M
3300006806\|Ga0079220_10887669	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	689	Open in IMG/M
3300006845\|Ga0075421_100980824	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	958	Open in IMG/M
3300006854\|Ga0075425_101298768	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	825	Open in IMG/M
3300006918\|Ga0079216_10728372	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	713	Open in IMG/M
3300006969\|Ga0075419_10198093	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1329	Open in IMG/M
3300007258\|Ga0099793_10050641	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1830	Open in IMG/M
3300007258\|Ga0099793_10172456	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1031	Open in IMG/M
3300007265\|Ga0099794_10503195	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	638	Open in IMG/M
3300009012\|Ga0066710_104064009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300009038\|Ga0099829_10581593	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	931	Open in IMG/M
3300009038\|Ga0099829_10737103	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	819	Open in IMG/M
3300009089\|Ga0099828_10125174	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2250	Open in IMG/M
3300009137\|Ga0066709_101566238	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	946	Open in IMG/M
3300009137\|Ga0066709_103164998	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	601	Open in IMG/M
3300009156\|Ga0111538_11057400	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1027	Open in IMG/M
3300009162\|Ga0075423_10809337	Not Available	991	Open in IMG/M
3300010303\|Ga0134082_10003655	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	5485	Open in IMG/M
3300010322\|Ga0134084_10290095	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	604	Open in IMG/M
3300010336\|Ga0134071_10445095	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	664	Open in IMG/M
3300010337\|Ga0134062_10287416	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	775	Open in IMG/M
3300010362\|Ga0126377_12975145	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	547	Open in IMG/M
3300012203\|Ga0137399_11128567	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	660	Open in IMG/M
3300012203\|Ga0137399_11296553	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	612	Open in IMG/M
3300012205\|Ga0137362_11019357	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	705	Open in IMG/M
3300012207\|Ga0137381_10097283	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2492	Open in IMG/M
3300012207\|Ga0137381_10738250	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	855	Open in IMG/M
3300012210\|Ga0137378_10176444	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1986	Open in IMG/M
3300012210\|Ga0137378_10435041	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1216	Open in IMG/M
3300012211\|Ga0137377_10947363	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	792	Open in IMG/M
3300012211\|Ga0137377_11581411	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300012212\|Ga0150985_101804571	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1056	Open in IMG/M
3300012683\|Ga0137398_10638542	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	738	Open in IMG/M
3300012685\|Ga0137397_10009652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	6717	Open in IMG/M
3300012922\|Ga0137394_11561465	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	518	Open in IMG/M
3300012927\|Ga0137416_10290446	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1351	Open in IMG/M
3300012944\|Ga0137410_11659012	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	561	Open in IMG/M
3300012972\|Ga0134077_10480210	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300012977\|Ga0134087_10087693	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1285	Open in IMG/M
3300012986\|Ga0164304_10282218	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1129	Open in IMG/M
3300014154\|Ga0134075_10248725	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	769	Open in IMG/M
3300015241\|Ga0137418_10981043	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300015359\|Ga0134085_10149802	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	989	Open in IMG/M
3300015371\|Ga0132258_11853009	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1519	Open in IMG/M
3300017654\|Ga0134069_1101008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	940	Open in IMG/M
3300017654\|Ga0134069_1346880	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	533	Open in IMG/M
3300017659\|Ga0134083_10255655	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	734	Open in IMG/M
3300017927\|Ga0187824_10220381	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	650	Open in IMG/M
3300017959\|Ga0187779_10945918	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	595	Open in IMG/M
3300018032\|Ga0187788_10208605	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	760	Open in IMG/M
3300018056\|Ga0184623_10417075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	587	Open in IMG/M
3300018061\|Ga0184619_10553044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	503	Open in IMG/M
3300018063\|Ga0184637_10340518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	903	Open in IMG/M
3300018433\|Ga0066667_10908706	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	757	Open in IMG/M
3300018433\|Ga0066667_12330249	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	502	Open in IMG/M
3300018468\|Ga0066662_10178478	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1648	Open in IMG/M
3300019882\|Ga0193713_1103581	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	791	Open in IMG/M
3300024232\|Ga0247664_1177860	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	504	Open in IMG/M
3300025910\|Ga0207684_10133098	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2134	Open in IMG/M
3300025910\|Ga0207684_11261517	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	610	Open in IMG/M
3300025930\|Ga0207701_11589880	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	526	Open in IMG/M
3300026306\|Ga0209468_1187203	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300026315\|Ga0209686_1190314	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	563	Open in IMG/M
3300026317\|Ga0209154_1162225	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	916	Open in IMG/M
3300026329\|Ga0209375_1194578	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	780	Open in IMG/M
3300026333\|Ga0209158_1101104	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1099	Open in IMG/M
3300026333\|Ga0209158_1218745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	658	Open in IMG/M
3300026527\|Ga0209059_1188003	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	708	Open in IMG/M
3300026536\|Ga0209058_1316516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	538	Open in IMG/M
3300026548\|Ga0209161_10214583	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1047	Open in IMG/M
3300027882\|Ga0209590_10997185	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	523	Open in IMG/M
3300028381\|Ga0268264_10653546	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1041	Open in IMG/M
3300028536\|Ga0137415_11256130	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	557	Open in IMG/M
3300028828\|Ga0307312_10613147	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	720	Open in IMG/M
3300031576\|Ga0247727_10081964	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3537	Open in IMG/M
3300031740\|Ga0307468_101811942	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	578	Open in IMG/M
3300032180\|Ga0307471_102601720	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	641	Open in IMG/M
3300033417\|Ga0214471_10146343	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1947	Open in IMG/M
3300033814\|Ga0364930_0267624	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	577	Open in IMG/M
3300034162\|Ga0373915_020537	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	511	Open in IMG/M
3300034354\|Ga0364943_0380901	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	543	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.11%
Host-Associated	Host-Associated	9.90%
Engineered	Engineered	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.16%
Plants	Host-Associated → Plants	9.90%
Aquatic	Environmental → Aquatic	4.95%
Bioremediation	Engineered → Bioremediation	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.94%
Sediment	Environmental → Aquatic → Sediment	3.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.96%
Floodplain	Environmental → Terrestrial → Floodplain	1.98%
Freshwater	Environmental → Aquatic → Freshwater	0.99%
Cave	Environmental → Terrestrial → Cave	0.99%
Metal	Engineered → Bioremediation → Metal	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.27%
Loam	Environmental → Terrestrial → Soil → Loam	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.99%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.99%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	25.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.96%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.98%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.98%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.99%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.99%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.99%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	22.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	10.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.95%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.95%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.96%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.98%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.98%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.99%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.99%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300024232	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK05	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033814	Sediment microbial communities from East River floodplain, Colorado, United States - 55_j17	Environmental	Open in IMG/M
3300034162	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.1	Engineered	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103033

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25384J37096_100377612	3300002561	Grasslands Soil	MTRALLIANPAAARTDARAVTTVRDTLRRGGWTVEVLATA
JGI25382J43887_104177531	3300002908	Grasslands Soil	MTRALLITNPAAARTDARAVTAIRDTLRRGGWSVDVLATT
JGI25390J43892_100203683	3300002911	Grasslands Soil	VTRALLITNPFAARADARAVTAILRILGRGGWNVDLRTTTGPG
Ga0063455_1000742281	3300004153	Soil	MTKALLITNPFAARAHEKSAAAIRDILEAGGWKVHVRSVAGP
Ga0062592_1000492372	3300004480	Soil	MTRALLISNPFASRAHSNAVTVIRDILQGGGWAVDVHTTAGPG
Ga0070703_104883482	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VTRALLITNPFAARADARAVTAILKILGRGGWNVDLRTISGPG
Ga0070697_1008062601	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VTRALLIANPAAARTDARAVTAIRDTLRKGGWTVEVRATA
Ga0066697_103528101	3300005540	Soil	MTRALLITNPAAARTDARAVTAIRDTLRRGGWSVDVLAT
Ga0066697_104281571	3300005540	Soil	VTRALLIANPAAARTDARAVTTVRDTLRRGGWTVEVLAT
Ga0066661_107927972	3300005554	Soil	VTRAVLITNPAAARHAARAVIGIRDTLRAGGWDVEVRATAEAG
Ga0066698_110777231	3300005558	Soil	VTRALLIANPAAARTDARAVTTVRDTLRRGGWTVEVLATARSG
Ga0068860_1007148381	3300005843	Switchgrass Rhizosphere	MTRALLITNPAAARTGARAVRAIRETLEGGGWTVDVQ
Ga0075023_1003163732	3300006041	Watersheds	VTRALLITNPAAARTEEITVQAVAETLRRGGWSVE
Ga0066652_1002387121	3300006046	Soil	VTRALLITNPFAARAHARAVTTIRDILQGGGWSVEVRSTA
Ga0066652_1003546891	3300006046	Soil	MTRALLITNPFAARAHARAVTTIRDILQGGGWSVEVRSTA
Ga0079222_103851121	3300006755	Agricultural Soil	MTRALLIANPAAARTDARAVTAIRDTLRGGGWTVEVRATAQA
Ga0079222_111162231	3300006755	Agricultural Soil	VTKALLITNPAAARTDARAVTAVRETLRRGGWDVDVL
Ga0066658_106882361	3300006794	Soil	MTRALLITNPAAARTDARAVTSIRDTLRGGGWAVEV
Ga0066659_101632971	3300006797	Soil	VTRAVLITNPAAARHAARAVIGIRDTLRAGGWDVEVRATAEAGDV
Ga0079221_111567981	3300006804	Agricultural Soil	VTRALLITNPAAARTDARAVTAIRETLRGGGWAVEVLATA
Ga0079220_108876692	3300006806	Agricultural Soil	VTRALLIANPAVARTDARAVMAIRDMLRRGGWAVEVRATAQ
Ga0075421_1009808241	3300006845	Populus Rhizosphere	VTRALLITNPAAARTDARAVTAIRETLRGGGWDVEVLAT
Ga0075425_1012987682	3300006854	Populus Rhizosphere	MTRALLITNPAAARTDARAVTAVRETLRGGGWDVE
Ga0079216_107283722	3300006918	Agricultural Soil	VTRALLIANPAAARTRQGAVKTVASTLRSTGWELEVLT
Ga0075419_101980931	3300006969	Populus Rhizosphere	VTRALLITNPAAARNDARAVTAIRETLRGGGWDVEVLA
Ga0099793_100506412	3300007258	Vadose Zone Soil	MTRALLITNPFAARADARAVTAILQILGRGGWNVDLRTITGPGD
Ga0099793_101724561	3300007258	Vadose Zone Soil	MTRALLITNPFAARADARAVTAVLQILGRGGWNVDLRTITGPGD
Ga0099794_105031951	3300007265	Vadose Zone Soil	MTRSLLITNPAAARTDARAVTAIRDTLRSGGWSVEVLATTQ
Ga0066710_1040640091	3300009012	Grasslands Soil	VTRALLITNPAAARTDARAVTAIRDTLRGGGWSVEVLATAQ
Ga0099829_105815932	3300009038	Vadose Zone Soil	MARALLIANPVAARTDARAVTTVRDTLRRGGWTVEVLATAR
Ga0099829_107371031	3300009038	Vadose Zone Soil	VTRALLITNPAAARTDARAVTAIRETLRGGGWNVEVL
Ga0099828_101251741	3300009089	Vadose Zone Soil	VTRALLITNPAAARTDARAVTAIRETLRGGGWDVE
Ga0066709_1015662382	3300009137	Grasslands Soil	MPRALLITNPIAARMDVRSVSAVRETLRGAGWAIEVAATAG
Ga0066709_1031649982	3300009137	Grasslands Soil	VTRALLITNPFAARADARAVTAILKILGRGGWNVDLRTITGPG
Ga0111538_110574001	3300009156	Populus Rhizosphere	MTRALLISNPFASRAHSNAVTVIRDILQGGGWAVD
Ga0075423_108093372	3300009162	Populus Rhizosphere	VTRALLIANPAAARTEARAVTTVRDALRRGGWAVEVLA
Ga0134082_100036551	3300010303	Grasslands Soil	MTRALLIANPAAARTDARAVTAIRDTLRHGGWTVEVRATAQ
Ga0134084_102900951	3300010322	Grasslands Soil	MTRALLITNPFAARADAKTVTAVLEVLSRGGWNVDLRTI
Ga0134071_104450952	3300010336	Grasslands Soil	VTRALLIANPAAARTEARAVTTVRDALRRGGWAIEVLA
Ga0134062_102874161	3300010337	Grasslands Soil	MTRALLIANPAAARTDAHAVTAIRDTLRRGGWTVEV
Ga0126377_129751451	3300010362	Tropical Forest Soil	VIRALLITNPAAARTEDVAVRAVTETLERGGWKVE
Ga0137399_111285672	3300012203	Vadose Zone Soil	MTRALVITNPFAARADARAVTAILEILGRGGWNVDLRTIKAPGD
Ga0137399_112965532	3300012203	Vadose Zone Soil	MTRALLIANPAAARPDARAVTAVRDTLRRGGWTVEVLATA
Ga0137362_110193572	3300012205	Vadose Zone Soil	MTRALLITNPFAARADARAVTAILKILGRGGWNVDLQTI
Ga0137381_100972832	3300012207	Vadose Zone Soil	VTRALLITNPAAARTDARAVAAIRDTLRGGGWSVEVL
Ga0137381_107382502	3300012207	Vadose Zone Soil	MTRALLITNPFAARADARAVTAILKILGRGGWNVDLQTITGPG
Ga0137378_101764441	3300012210	Vadose Zone Soil	VARALLITNPAAARTDARAVAAIRETLNGGGWTVEVLATA
Ga0137378_104350411	3300012210	Vadose Zone Soil	MTRALLITNPFAARADARAVTAILEILGRGGWNVDLKTISGPG
Ga0137377_109473632	3300012211	Vadose Zone Soil	MARALLITNPFAARADARAVAAILRILGRGGWNVDLRT
Ga0137377_115814112	3300012211	Vadose Zone Soil	VTRALLITNPFAARADARAVAAILRILGRGGWNVDLRT
Ga0150985_1018045711	3300012212	Avena Fatua Rhizosphere	MTKALLITNPFAARAHEKSAAAIRDILEAGGWKVHVRSVAGPGDA
Ga0137398_106385421	3300012683	Vadose Zone Soil	MTRALLITKPFAARAHARAVTAIRDNLQRGGWSVEVRSTA
Ga0137397_100096523	3300012685	Vadose Zone Soil	VTRALLITNPAAARTDARAVRAIRETLRAGGWTVEVLATA
Ga0137394_115614652	3300012922	Vadose Zone Soil	MTRALLITNPAAARTDLVAHKEIASTLRKGGWEV*
Ga0137416_102904461	3300012927	Vadose Zone Soil	MARALLIANPAAARTEARAVTTVRDTLRRGGWTVEVLATAR
Ga0137410_116590122	3300012944	Vadose Zone Soil	VTRALLITNPAAARTDARAVTAIRETLRGGGWDVEVLATA
Ga0134077_104802102	3300012972	Grasslands Soil	MARALLIANPAAARTDARAVTAVRDTLRRGGWSVE
Ga0134087_100876931	3300012977	Grasslands Soil	MTRALLIANPAAARTDARAVTTVRDTLRRGGWTVEVLAT
Ga0164304_102822182	3300012986	Soil	MARALLIANPAAARTEARAVTTVRDTLRRGGWTVEVLA
Ga0134075_102487251	3300014154	Grasslands Soil	MTRALLITNPFAARAHARAVTAIRDILQGGGWSVEVRST
Ga0137418_109810432	3300015241	Vadose Zone Soil	MTRALLIANPAAARTDARAVTAVQDTLRRGGWTVEVLAT
Ga0134085_101498022	3300015359	Grasslands Soil	VTRAVLITNPAAARHAARAVMGIRDTLRAGGWDVEVRAT
Ga0132258_118530092	3300015371	Arabidopsis Rhizosphere	VTRALLIANPAAARTDARAVTAIRDTLRRGGWAVEVR
Ga0134069_11010081	3300017654	Grasslands Soil	MTRALLITNPAAARTDARAVTAIRDTLRRGGWSVDVLATTQA
Ga0134069_13468802	3300017654	Grasslands Soil	MTRALLITNPFAARAHARAVTTIRDILQGGGWSVEVRST
Ga0134083_102556552	3300017659	Grasslands Soil	MTRALVITNPFAARADARAVTAILKILGRGGWNVDLRTIKAPG
Ga0187824_102203811	3300017927	Freshwater Sediment	VTRVLLISNPVAARTDVRAIAAVRDVLQGGGWTVE
Ga0187779_109459181	3300017959	Tropical Peatland	VTRALLITNPAAARTDARAVRGILDTLRSGGWTCDVQ
Ga0187788_102086052	3300018032	Tropical Peatland	VITNPAAARTDARAVTAIRETLRSGGWTVEVRATAH
Ga0184623_104170751	3300018056	Groundwater Sediment	VTRALLITNPFAARAHARAVTTIRDILQGGGWSVD
Ga0184619_105530441	3300018061	Groundwater Sediment	VTRALLITNPAAARTGARAVRAIRETLEAGGWMVEIR
Ga0184637_103405182	3300018063	Groundwater Sediment	VTRALLITNPVAARTEARAVAVVRDTLRAGGWTVDLLATNSP
Ga0066667_109087062	3300018433	Grasslands Soil	VTRALLIANPAAARTDARAVTTVRDTLRRGGWTVEVLATA
Ga0066667_123302492	3300018433	Grasslands Soil	MARALLITNPAAGRADARAVTVIRATLRPGGWSVDLLAP
Ga0066662_101784782	3300018468	Grasslands Soil	MTRALLITNPAAARTDARAVTAIRDTLRRGGWSVDVLA
Ga0193713_11035811	3300019882	Soil	MTRALLITNPFAARAHARAVTAIRDILQGGGWSVEVR
Ga0247664_11778601	3300024232	Soil	VTRALLITNPAAARTEDVAVRAVAETLERGGWKVELAAT
Ga0207684_101330981	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MTRALLIANPAAARTDARAVTAIRDTLRRGGWTVEVRA
Ga0207684_112615171	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTRALVIANPAAARTEARAVTTVRDALRRGGWAVEVLA
Ga0207701_115898801	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTRVLLISNPFASRAHSNAVTVIRDILQGGGWAVDVHTTAGP
Ga0209468_11872031	3300026306	Soil	MTRALLIANPAAARTDARAVTTVRDTLRRGGWTVEVLA
Ga0209686_11903141	3300026315	Soil	MTRALLITNPVAARAHARAVTTISDVLRGGGWSLDI
Ga0209154_11622251	3300026317	Soil	MTRALLIANPAAARTDARAVTAIRDTLRRGGWTVEVRAT
Ga0209375_11945782	3300026329	Soil	VTRAVLITNPAAARHAARAVLAIRDTLRAGGWDVE
Ga0209158_11011041	3300026333	Soil	MTRALLITNPFAARADARAVTAILKILGRGGWNVDLQTITGPGD
Ga0209158_12187452	3300026333	Soil	VTRALLIANPAAARTEARAVTTVREALRRGGWAIEVLAT
Ga0209059_11880031	3300026527	Soil	MTRALLIANPAAARTDARAVTAIRDTLRHGGWTVEVRA
Ga0209058_13165161	3300026536	Soil	VTRALLITNPFAARADARAVTAILKILGRGGWSVDLRTITGP
Ga0209161_102145832	3300026548	Soil	MTRALLITNPLAARAHARAVTTISDILRGGGWSVEVRSTTGP
Ga0209590_109971851	3300027882	Vadose Zone Soil	MARALLIANPVAARTDARAVTTVRDTLRRGGWTVEVL
Ga0268264_106535462	3300028381	Switchgrass Rhizosphere	MTRALLITNPAAARTGARAVRAIRETLEGGGWTVDVQATGK
Ga0137415_112561302	3300028536	Vadose Zone Soil	MTRALLITNPAAARADARAVTAIRDTRRGGGWEVE
Ga0307312_106131471	3300028828	Soil	VARALLITNPAAARTDLVAHKEIASTLRSGGWDIEV
Ga0247727_100819642	3300031576	Biofilm	MTRALLITNPAAARLAARDVTVVRDILRAGGWALDLV
Ga0307405_107396341	3300031731	Rhizosphere	VTRALLIANLAAARTAWAGVERVSQTLRSGGWDVQVIATQGPGHA
Ga0307468_1018119422	3300031740	Hardwood Forest Soil	MTRALVITNPFAARGHVHAVTDILKVLGRGGWNVDL
Ga0307471_1026017202	3300032180	Hardwood Forest Soil	VTRALLITNPAAARHDARALTAVRNTLRQGGWTVEVAA
Ga0214471_101463432	3300033417	Soil	VTRALLITNPAAARTDARAVTAVREILRAGGWAVEVLA
Ga0364930_0267624_457_576	3300033814	Sediment	MTRALLITNPAAARTEARAVTAIRETLRAGGWDVEVRATL
Ga0373915_020537_382_510	3300034162	Sediment Slurry	MTRALLITNPFAARAHGNTATTIRDILQGGGWNVDVRSVAGPG
Ga0364943_0380901_2_133	3300034354	Sediment	MTRALLISNPFAARAHSGAVTAIRDILVRGGWKVDVHTTTGPGD

Hidden Markov Model


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