Metagenome / Metatranscriptome Family F103096

Basic Information
Family ID	F103096
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	91 residues
Representative Sequence	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK
Number of Associated Samples	86
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (98.020 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (19.802 % of family members)
Environment Ontology (ENVO)	Unclassified (78.218 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.020 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 78.72% β-sheet: 0.00% Coil/Unstructured: 21.28%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF04851	ResIII	36.63
PF13392	HNH_3	4.95
PF05037	DUF669	3.96
PF13479	AAA_24	2.97
PF08774	VRR_NUC	0.99

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.02 %
All Organisms	root	All Organisms	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.02 %
cellular organisms	root	All Organisms → cellular organisms	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.02 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.98 %

Scaffold	Taxonomy	Length	IMG/M Link
3300021371\|Ga0213863_10008143	All Organisms → cellular organisms → Bacteria	6681	Open in IMG/M
3300021957\|Ga0222717_10002754	All Organisms → cellular organisms → Bacteria	13425	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.01%
Freshwater	Environmental → Aquatic → Freshwater	0.99%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	29.70%
Strait	Environmental → Aquatic → Marine → Strait	15.84%
Oceanic	Environmental → Aquatic → Marine → Oceanic	14.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.87%
Pelagic	Environmental → Aquatic → Marine → Pelagic	9.90%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	9.90%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	5.94%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	29.70%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	15.84%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	14.85%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.87%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	9.90%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	9.90%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	0.99%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.99%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	19.80%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	15.84%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	9.90%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	8.91%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	6.93%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	5.94%
Deep Ocean	Environmental → Aquatic → Marine → Oceanic → Unclassified → Deep Ocean	4.95%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	4.95%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.95%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	3.96%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.97%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	2.97%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.98%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	0.99%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.99%
Sea-Ice Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sea-Ice Brine	0.99%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.99%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.99%
Freshwater And Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine	0.99%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000101	Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010	Environmental	Open in IMG/M
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000928	Marine plume microbial communities from the Columbia River - 25 PSU	Environmental	Open in IMG/M
3300001349	Pelagic Microbial community sample from North Sea - COGITO 998_met_10	Environmental	Open in IMG/M
3300003478	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_100m_DNA	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004110	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S2LV_100m_DNA	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004457	Marine viral communities from Newfoundland, Canada MC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006735	Marine viral communities from the Subarctic Pacific Ocean - 5B_ETSP_OMZ_AT15132_CsCl metaG	Environmental	Open in IMG/M
3300006737	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG	Environmental	Open in IMG/M
3300006752	Marine viral communities from the Subarctic Pacific Ocean - 13_ETSP_OMZ_AT15268 metaG	Environmental	Open in IMG/M
3300006803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_>0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007276	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007622	Estuarine microbial communities from the Columbia River estuary - metaG 1449A-02	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300008219	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_b05	Environmental	Open in IMG/M
3300009071	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120405	Environmental	Open in IMG/M
3300009428	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009436	Marine eukaryotic phytoplankton communities from Arctic Ocean - Fram Strait ARC3M Metagenome	Environmental	Open in IMG/M
3300009437	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110414	Environmental	Open in IMG/M
3300009443	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421	Environmental	Open in IMG/M
3300009496	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120524	Environmental	Open in IMG/M
3300009498	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120426	Environmental	Open in IMG/M
3300009526	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_90	Environmental	Open in IMG/M
3300009604	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_s16	Environmental	Open in IMG/M
3300009605	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG DeepMed_M9	Environmental	Open in IMG/M
3300011129	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, 0.02	Environmental	Open in IMG/M
3300011245	Seawater microbial communities from Japan Sea near Toyama Prefecture, Japan - 2014_4, 0.2	Environmental	Open in IMG/M
3300012953	Marine eukaryotic phytoplankton communities from the Atlantic Ocean - Atlantic ANT 2 Metagenome	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017731	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 39 SPOT_SRF_2013-01-16	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017744	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 20 SPOT_SRF_2011-02-23	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017758	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 32 SPOT_SRF_2012-05-30	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017760	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 31 SPOT_SRF_2012-02-16	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017765	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 36 SPOT_SRF_2012-09-28	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017781	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 46 SPOT_SRF_2013-08-14	Environmental	Open in IMG/M
3300017782	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 3 SPOT_SRF_2009-08-19	Environmental	Open in IMG/M
3300019077	Metatranscriptome of marine microbial communities from Baltic Sea - GS695_0p8	Environmental	Open in IMG/M
3300020294	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556124-ERR599153)	Environmental	Open in IMG/M
3300020385	Marine microbial communities from Tara Oceans - TARA_B100001059 (ERX556045-ERR598965)	Environmental	Open in IMG/M
3300020438	Marine microbial communities from Tara Oceans - TARA_B100001094 (ERX555907-ERR598942)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300021371	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO497	Environmental	Open in IMG/M
3300021378	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021957	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_18D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental	Open in IMG/M
3300022072	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)	Environmental	Open in IMG/M
3300022178	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)	Environmental	Open in IMG/M
3300024346	Whole water sample coassembly	Environmental	Open in IMG/M
3300025085	Marine viral communities from the Subarctic Pacific Ocean - 14_ETSP_OMZ_AT15311 metaG (SPAdes)	Environmental	Open in IMG/M
3300025086	Marine viral communities from the Subarctic Pacific Ocean - 5_ETSP_OMZ_AT15132 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025276	Marine viral communities from the Global Malaspina Expedition - Malaspina viral metaG Antarct_55 (SPAdes)	Environmental	Open in IMG/M
3300025610	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025645	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (SPAdes)	Environmental	Open in IMG/M
3300025652	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)	Environmental	Open in IMG/M
3300025654	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110509 (SPAdes)	Environmental	Open in IMG/M
3300025665	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI037_S3LV_130m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025666	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110426 (SPAdes)	Environmental	Open in IMG/M
3300025770	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - SI072_LV_165m_DNA (SPAdes)	Environmental	Open in IMG/M
3300025806	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025821	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110421 (SPAdes)	Environmental	Open in IMG/M
3300025849	Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300028125	Sea-ice brine viral communities from Beaufort Sea near Barrow, Alaska, United States - SB	Environmental	Open in IMG/M
3300031605	Marine microbial communities from Western Arctic Ocean, Canada - CB9_32.1	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2010_101217842	3300000101	Marine	MKTPDEMMNIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDADDFLDRIVK*
DelMOSum2011_100632973	3300000115	Marine	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK*
DelMOSum2011_101270871	3300000115	Marine	MKTPDEMMNIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDADD
DelMOSum2011_101389812	3300000115	Marine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK*
DelMOWin2010_100181365	3300000117	Marine	VKTQDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWDKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK*
DelMOWin2010_101901961	3300000117	Marine	MKTPDEMMNIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDAD
OpTDRAFT_100612622	3300000928	Freshwater And Marine	VKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMTQEKILEAQKDADDFLDRIVK*
JGI20160J14292_100107473	3300001349	Pelagic Marine	VKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLNADEIGVPIMTQEKILEAQKDADDFLGKIATGEKQ*
JGI26238J51125_10207352	3300003478	Marine	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQETILKAQKDADDFLGKIVK*
JGI26238J51125_10855732	3300003478	Marine	MDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK*
Ga0055584_1010728612	3300004097	Pelagic Marine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK*
Ga0008648_100232142	3300004110	Marine	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK*
Ga0065861_11416691	3300004448	Marine	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDADDF
Ga0065861_11974082	3300004448	Marine	MKTPDEMMNIVNDLYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLEKIVK*
Ga0066224_11465832	3300004457	Marine	MKTPSEMMDIMNALYLSMPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNGADNISADLDNDEIGVPIMSQKTILKAQKDADDFLDRIVK*
Ga0066222_12040502	3300004460	Marine	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDADDFLDRIVK*
Ga0075478_100583513	3300006026	Aqueous	SLMKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDADDFLDRIVK*
Ga0075466_11014072	3300006029	Aqueous	GISLMKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK*
Ga0075466_11357791	3300006029	Aqueous	GISLMKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK*
Ga0098038_10139193	3300006735	Marine	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDADDFLGKIVTGEKQ*
Ga0098037_10051439	3300006737	Marine	MTTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDADDFLGKIVTGEKQ*
Ga0098048_10394963	3300006752	Marine	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDKIGVPIMSQKTILKAQKDADDFLGKIVTGEKQ*
Ga0075467_102004342	3300006803	Aqueous	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMTQEKILEAQKDADDFLGKIVTGEK
Ga0075479_101720561	3300006870	Aqueous	NALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDADDFLDRIVK*
Ga0070748_10956073	3300006920	Aqueous	DIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK*
Ga0070748_13432311	3300006920	Aqueous	NALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVTNNVADNISADLDADEIGVPIMTQEKILEAQKDADDFLGKIVK*
Ga0075468_100982293	3300007229	Aqueous	LPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK*
Ga0070747_10601921	3300007276	Aqueous	TPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK*
Ga0070747_12700922	3300007276	Aqueous	MKTTDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMTQEKILEAQKDADDFLGKIVK*
Ga0099847_10521472	3300007540	Aqueous	MMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWDKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK*
Ga0102863_10786582	3300007622	Estuarine	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQKTILKAQKDADDFLGKIVK*
Ga0075480_101971812	3300008012	Aqueous	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMTQEKILKAQKDADDFLDRIVK*
Ga0114905_10578252	3300008219	Deep Ocean	VKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWDKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK*
Ga0115566_104681471	3300009071	Pelagic Marine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWDKIKDRVSNNVADNISADLDADEIGVPIMTQEKILEAQKDADDFLGKIATGEKQ*
Ga0114915_11063222	3300009428	Deep Ocean	MMNIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDTDEIGVPIMTQEKILEAQKDADDFLGKIVK*
Ga0115545_11571733	3300009433	Pelagic Marine	MKTTDGMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDADDFLDRIVK*
Ga0115008_100249084	3300009436	Marine	MMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLNADEIGVPIMTQEKILEAQKDADDFLGKIATGEKQ*
Ga0115556_13478422	3300009437	Pelagic Marine	MMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISSDLDADEIGVPIMTQKTILKAQ
Ga0115557_10642253	3300009443	Pelagic Marine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMTQEKILEAQKDADDFLGKIATGEKQ*
Ga0115570_102556793	3300009496	Pelagic Marine	VKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMTQEKILEAQKDADDFLGKIATGEKQ*
Ga0115568_104383452	3300009498	Pelagic Marine	MMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMTQEKILEAQKDADDFLGKIATGEKQ*
Ga0115004_103984592	3300009526	Marine	MKTPDEMMNIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK*
Ga0114901_11300512	3300009604	Deep Ocean	ALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWDKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK*
Ga0114906_10996591	3300009605	Deep Ocean	VNALYLTLPDEIEQEEMACIFTVLLRMFGLNLEWDKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK*
Ga0151672_1610362	3300011129	Marine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGDPIMTQEKILEG
Ga0151673_1306892	3300011245	Marine	LKIVNVLYLTLPLEIDQEEMAYIFTVLLGMFALNLELHKIKDRVSNNVADNISADLDNDEIGVPIMTQEKILEAQKDADDFLGKIVK*
Ga0163179_100938362	3300012953	Seawater	MKTTDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMTQETILKAQKDADDFLGKIVK*
Ga0181419_10066864	3300017728	Seawater	VKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0181419_10074354	3300017728	Seawater	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWDKIKDRVSNNVADNISADLDNDEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0181416_10162443	3300017731	Seawater	KTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWDKIKDRVSNNVADNISADLDNDEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0181418_10079836	3300017740	Seawater	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0181397_10884612	3300017744	Seawater	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWDKIKDRVSNNVADNISADLDNDEIGVPIMTQEKILEAQKDADDFLDRIVK
Ga0181382_10510233	3300017756	Seawater	VKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWDKIKDRVSNNVADNISADLDNDEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0181409_10786822	3300017758	Seawater	VKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQKTILKAQKDADDFLGKIVK
Ga0181414_11112182	3300017759	Seawater	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWDKIKDRVSNNVADNISADLDNDEIGVPIMSQETILKAQKDADDFLDRIVK
Ga0181408_11290831	3300017760	Seawater	VKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWDKIKDRVSNNVADNISADLDNDEIGVP
Ga0181422_12147901	3300017762	Seawater	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWDKIKDRVSNNVADNISANLDADEIGVPIMSQKTILKAQKDADDFLGKIVK
Ga0181410_11806762	3300017763	Seawater	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWDKIKDRVSNNVADNISADLDNDEIGVPIMTQEKILE
Ga0181385_10252372	3300017764	Seawater	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMTQEKILEAQKDADDFLGKIVK
Ga0181413_10039382	3300017765	Seawater	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMTQEKILEAQKDADDFLDRIVK
Ga0181430_11272552	3300017772	Seawater	VKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLDRIVK
Ga0181423_13559662	3300017781	Seawater	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQ
Ga0181380_10153541	3300017782	Seawater	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQETILKAQKDA
Ga0188868_10012162	3300019077	Freshwater Lake	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWDKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK
Ga0211520_100067611	3300020294	Marine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0211677_101376181	3300020385	Marine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQKTILKAQKDA
Ga0211576_100112149	3300020438	Marine	VKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMTQEKILEAQKDADDFLDRIVK
Ga0211518_100966151	3300020440	Marine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQETILKAQKDADDFLGKIV
Ga0211577_100470315	3300020469	Marine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWDKIKDRVSNNVADNISADLDNDEIGVPIMTQEKILEAQKDADDFLGKIVK
Ga0213863_100081432	3300021371	Seawater	VKTQDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWDKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK
Ga0213861_103186152	3300021378	Seawater	PTGRDPQSGQQRRIEGEVQMKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0213868_100585152	3300021389	Seawater	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0222717_1000275415	3300021957	Estuarine Water	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQKTILKAQKDADDFLGKIVK
Ga0222717_100610391	3300021957	Estuarine Water	KTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMTQEKILEAQKDADDFLDRIVK
Ga0222717_101802602	3300021957	Estuarine Water	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0222717_102525702	3300021957	Estuarine Water	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWDKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0222716_101091721	3300021959	Estuarine Water	TPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWDKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0222716_101323571	3300021959	Estuarine Water	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMTQE
Ga0222713_105719272	3300021962	Estuarine Water	DIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMTQEKILEAQKDADDFLDRIVK
Ga0196889_10731502	3300022072	Aqueous	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK
Ga0196889_10759032	3300022072	Aqueous	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDADDFLDRIVK
Ga0196887_10680101	3300022178	Aqueous	YLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0244775_107345971	3300024346	Estuarine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMTQEKILEAQKDADDFLDRIV
Ga0208792_10663451	3300025085	Marine	SEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDADDFLGKIVTGEKQ
Ga0208157_10730922	3300025086	Marine	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDADDFLGKIVTGEKQ
Ga0209535_11056042	3300025120	Marine	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0208814_10696542	3300025276	Deep Ocean	VKTPDEMMNIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDTDEIGVPIMTQEKILEAQKDADDFLGKIVK
Ga0208149_11439351	3300025610	Aqueous	SLMKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQKTILKAQKDADDFLDRIVK
Ga0208643_10835151	3300025645	Aqueous	DIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK
Ga0208134_10822683	3300025652	Aqueous	TPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQEKILEAQKDADDFLGKIVK
Ga0208134_11068362	3300025652	Aqueous	VKTPDEMMNIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMTQEKILEAQKDADDFLGKIVTGEKQ
Ga0209196_12076822	3300025654	Pelagic Marine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWDKIKDRVSNNVADNISADLDADEIGVPIMTQEKILEAQKDADDFLGKIATGEKQ
Ga0209360_11715362	3300025665	Marine	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDNDEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0209601_12021901	3300025666	Pelagic Marine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWDKIKDRVSNNVADNISADLDADEIGVPIMTQEKILEAQKDADDFLGKIATGE
Ga0209362_12825242	3300025770	Marine	MKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQK
Ga0208545_100463011	3300025806	Aqueous	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETI
Ga0209600_11516862	3300025821	Pelagic Marine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMTQEKILEAQKDADDFLGKIATGEKQ
Ga0209603_10438134	3300025849	Pelagic Marine	VKTPSEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLNADEIGVPIMTQEKILEAQKDADDFLGKIATGEKQ
Ga0209630_103222851	3300025892	Pelagic Marine	MKTPDEMMDIVNALYLTLPDEIEQEEMACIFTVLLGMFGLNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQ
Ga0256368_10421072	3300028125	Sea-Ice Brine	MKTPDEMMNIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDADDFLGKIVK
Ga0302132_105252512	3300031605	Marine	MKTPDEMMNIVNALYLTLPDEIEQEEMACIFTVLLGMFALNLEWHKIKDRVSNNVADNISADLDADEIGVPIMSQETILKAQKDAD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103096

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign