Metagenome Family F103272

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103272
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	59 residues
Representative Sequence	MTDREKELIKYKKQYLNLVNKITQLQLSGENLPEELLKQAQEIARAAEIPETFLKSIL
Number of Associated Samples	55
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	62.38 %
% of genes near scaffold ends (potentially truncated)	16.83 %
% of genes from short scaffolds (< 2000 bps)	86.14 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (79.208 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment (13.861 % of family members)
Environment Ontology (ENVO)	Unclassified (29.703 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Sediment (saline) (31.683 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.49% β-sheet: 0.00% Coil/Unstructured: 46.51%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.118.8.0: automated matches	d6kp3a_	6kp3	0.77852
a.7.6.1: Ribosomal protein S20	d1fjgt_	1fjg	0.76102
a.24.9.2: VBS domain	d2b0ha1	2b0h	0.75803
a.47.2.1: t-snare proteins	d1hs7a_	1hs7	0.75553
a.118.8.0: automated matches	d5mjza_	5mjz	0.74949

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF12651	RHH_3	21.78
PF07963	N_methyl	8.91
PF13544	Obsolete Pfam Family	3.96
PF00072	Response_reg	1.98
PF14294	DUF4372	1.98
PF13519	VWA_2	1.98
PF12694	cpYpsA	0.99
PF07228	SpoIIE	0.99
PF02754	CCG	0.99
PF00805	Pentapeptide	0.99
PF00041	fn3	0.99
PF05567	Neisseria_PilC	0.99
PF12684	DUF3799	0.99
PF13181	TPR_8	0.99
PF00990	GGDEF	0.99
PF13358	DDE_3	0.99
PF12762	DDE_Tnp_IS1595	0.99
PF00753	Lactamase_B	0.99
PF11059	DUF2860	0.99
PF13946	DUF4214	0.99
PF01527	HTH_Tnp_1	0.99
PF00216	Bac_DNA_binding	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0247	Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcF	Energy production and conversion [C]	0.99
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.99
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.99
COG2048	Heterodisulfide reductase, subunit B	Energy production and conversion [C]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.21 %
All Organisms	root	All Organisms	20.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.21 %
cellular organisms	root	All Organisms → cellular organisms	20.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.21 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	20.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.91 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.21 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	8.91 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.21 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8.91 %
Spirochaetales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.21 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	3.96 %
Spirochaetaceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.21 %
Alkalispirochaeta	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta	2.97 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.97 %
Olavius sp. associated proteobacterium Delta 1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	79.21 %
Alkalispirochaeta odontotermitis	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	2.97 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.97 %
Olavius sp. associated proteobacterium Delta 1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003449\|DC07C_1069776	Not Available	532	Open in IMG/M
3300004023\|Ga0055441_10250515	Not Available	504	Open in IMG/M
3300004026\|Ga0055443_10153815	Not Available	695	Open in IMG/M
3300004026\|Ga0055443_10167004	Not Available	672	Open in IMG/M
3300004026\|Ga0055443_10190527	Not Available	637	Open in IMG/M
3300004147\|Ga0055515_10138990	Not Available	657	Open in IMG/M
3300005182\|Ga0069000_10063174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	860	Open in IMG/M
3300005182\|Ga0069000_10208604	Not Available	530	Open in IMG/M
3300005215\|Ga0069001_10178238	Not Available	592	Open in IMG/M
3300005215\|Ga0069001_10186702	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	581	Open in IMG/M
3300005601\|Ga0070722_10509647	Not Available	541	Open in IMG/M
3300005609\|Ga0070724_10563332	All Organisms → cellular organisms → Bacteria	511	Open in IMG/M
3300005920\|Ga0070725_10325144	Not Available	678	Open in IMG/M
3300006467\|Ga0099972_13591448	Not Available	540	Open in IMG/M
3300007102\|Ga0102541_1053891	Not Available	510	Open in IMG/M
3300007778\|Ga0102954_1129083	Not Available	719	Open in IMG/M
3300007784\|Ga0102955_1003781	All Organisms → cellular organisms → Bacteria	3134	Open in IMG/M
3300008416\|Ga0115362_100046880	Not Available	1005	Open in IMG/M
3300008416\|Ga0115362_102151972	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	696	Open in IMG/M
3300009027\|Ga0102957_1392979	Not Available	518	Open in IMG/M
3300009035\|Ga0102958_1173883	Not Available	708	Open in IMG/M
3300009138\|Ga0102959_1353753	Not Available	507	Open in IMG/M
3300009488\|Ga0114925_11060307	Not Available	591	Open in IMG/M
3300009506\|Ga0118657_10148957	All Organisms → cellular organisms → Bacteria	3341	Open in IMG/M
3300009506\|Ga0118657_10290914	Not Available	2204	Open in IMG/M
3300009506\|Ga0118657_10703047	Not Available	2035	Open in IMG/M
3300009506\|Ga0118657_10826201	Not Available	1152	Open in IMG/M
3300009506\|Ga0118657_11600938	Not Available	765	Open in IMG/M
3300009509\|Ga0123573_10507643	Not Available	1147	Open in IMG/M
3300009509\|Ga0123573_10622783	Not Available	1019	Open in IMG/M
3300009509\|Ga0123573_11278600	Not Available	684	Open in IMG/M
3300009509\|Ga0123573_11297449	Not Available	678	Open in IMG/M
3300009788\|Ga0114923_10624832	Not Available	810	Open in IMG/M
3300009788\|Ga0114923_10849878	Not Available	695	Open in IMG/M
3300010392\|Ga0118731_102524674	Not Available	524	Open in IMG/M
3300010392\|Ga0118731_102642756	All Organisms → cellular organisms → Bacteria	2654	Open in IMG/M
3300010392\|Ga0118731_104099886	Not Available	551	Open in IMG/M
3300010392\|Ga0118731_106707255	Not Available	771	Open in IMG/M
3300010392\|Ga0118731_106889026	Not Available	637	Open in IMG/M
3300010392\|Ga0118731_107355460	Not Available	847	Open in IMG/M
3300010392\|Ga0118731_109097688	Not Available	531	Open in IMG/M
3300010392\|Ga0118731_111194257	Not Available	757	Open in IMG/M
3300010412\|Ga0136852_10417971	Not Available	1307	Open in IMG/M
3300010413\|Ga0136851_10008842	All Organisms → cellular organisms → Bacteria	11815	Open in IMG/M
3300010413\|Ga0136851_10102308	Not Available	3031	Open in IMG/M
3300010413\|Ga0136851_10185661	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2152	Open in IMG/M
3300010413\|Ga0136851_10190726	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Olavius sp. associated proteobacterium Delta 1	2118	Open in IMG/M
3300010413\|Ga0136851_10573949	Not Available	1119	Open in IMG/M
3300010413\|Ga0136851_12302719	Not Available	509	Open in IMG/M
3300010430\|Ga0118733_101434958	Not Available	1377	Open in IMG/M
3300010430\|Ga0118733_101537853	Not Available	1326	Open in IMG/M
3300010430\|Ga0118733_105102822	Not Available	694	Open in IMG/M
3300010430\|Ga0118733_105917945	Not Available	641	Open in IMG/M
3300010430\|Ga0118733_106054346	Not Available	634	Open in IMG/M
3300010430\|Ga0118733_106681332	Not Available	601	Open in IMG/M
3300010430\|Ga0118733_108049790	Not Available	545	Open in IMG/M
3300011118\|Ga0114922_10923645	Not Available	710	Open in IMG/M
3300011262\|Ga0151668_1039959	Not Available	795	Open in IMG/M
3300011262\|Ga0151668_1059413	Not Available	702	Open in IMG/M
3300022201\|Ga0224503_10019411	Not Available	1967	Open in IMG/M
3300022201\|Ga0224503_10042800	Not Available	1358	Open in IMG/M
3300022201\|Ga0224503_10072032	Not Available	1064	Open in IMG/M
3300022201\|Ga0224503_10262805	Not Available	568	Open in IMG/M
3300022202\|Ga0224498_10038175	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300022202\|Ga0224498_10088009	Not Available	892	Open in IMG/M
3300022202\|Ga0224498_10129702	Not Available	735	Open in IMG/M
3300022202\|Ga0224498_10210008	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	577	Open in IMG/M
3300022206\|Ga0224499_10207664	Not Available	666	Open in IMG/M
3300022217\|Ga0224514_10327873	Not Available	562	Open in IMG/M
3300022218\|Ga0224502_10038608	Not Available	1784	Open in IMG/M
3300022308\|Ga0224504_10251513	Not Available	730	Open in IMG/M
3300024265\|Ga0209976_10533786	Not Available	620	Open in IMG/M
(restricted) 3300024340\|Ga0255042_10012042	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1727	Open in IMG/M
(restricted) 3300024519\|Ga0255046_10285281	Not Available	768	Open in IMG/M
(restricted) 3300024529\|Ga0255044_10078626	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	1161	Open in IMG/M
(restricted) 3300024529\|Ga0255044_10159993	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	866	Open in IMG/M
(restricted) 3300024529\|Ga0255044_10171089	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	841	Open in IMG/M
3300025561\|Ga0210119_1031418	Not Available	995	Open in IMG/M
3300025883\|Ga0209456_10082869	Not Available	1426	Open in IMG/M
3300026099\|Ga0209920_1053086	Not Available	514	Open in IMG/M
3300026138\|Ga0209951_1071873	Not Available	726	Open in IMG/M
3300027820\|Ga0209578_10341735	Not Available	690	Open in IMG/M
(restricted) 3300027837\|Ga0255041_10181565	Not Available	735	Open in IMG/M
3300027845\|Ga0209271_10150459	Not Available	955	Open in IMG/M
(restricted) 3300027856\|Ga0255054_10005726	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	6780	Open in IMG/M
(restricted) 3300027856\|Ga0255054_10620280	Not Available	522	Open in IMG/M
(restricted) 3300027865\|Ga0255052_10217259	Not Available	934	Open in IMG/M
(restricted) 3300027868\|Ga0255053_10011222	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Spirochaetaceae → Alkalispirochaeta → Alkalispirochaeta odontotermitis	4430	Open in IMG/M
(restricted) 3300027868\|Ga0255053_10400305	Not Available	664	Open in IMG/M
(restricted) 3300027881\|Ga0255055_10003571	All Organisms → cellular organisms → Bacteria	10466	Open in IMG/M
3300027917\|Ga0209536_100119720	All Organisms → cellular organisms → Bacteria	3339	Open in IMG/M
3300027917\|Ga0209536_100202464	Not Available	2493	Open in IMG/M
3300027978\|Ga0209165_10083431	All Organisms → cellular organisms → Bacteria	1127	Open in IMG/M
3300029827\|Ga0134606_10135243	Not Available	769	Open in IMG/M
3300032136\|Ga0316201_11406138	Not Available	579	Open in IMG/M
3300032251\|Ga0316198_10710604	Not Available	538	Open in IMG/M
3300032262\|Ga0316194_10393984	Not Available	876	Open in IMG/M
3300032262\|Ga0316194_10544847	Not Available	731	Open in IMG/M
3300032262\|Ga0316194_10588427	Not Available	701	Open in IMG/M
3300032262\|Ga0316194_10624446	Not Available	678	Open in IMG/M
3300033429\|Ga0316193_10346973	Not Available	1179	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.01%
Engineered	Engineered	0.99%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	95.05%
Terrestrial	Environmental → Terrestrial	3.96%
Lab Enrichment	Engineered → Lab Enrichment	0.99%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	79.21%
Sediment	Environmental → Aquatic → Sediment	12.87%
Soil	Environmental → Terrestrial → Soil	3.96%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	2.97%
Defined Media	Engineered → Lab Enrichment → Defined Media	0.99%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	31.68%
Wetlands	Environmental → Aquatic → Marine → Wetlands	14.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.87%
Sediment	Environmental → Aquatic → Marine → Sediment	11.88%
Oceanic	Environmental → Aquatic → Marine → Oceanic	6.93%
Inlet	Environmental → Aquatic → Marine → Inlet	5.94%
Strait	Environmental → Aquatic → Marine → Strait	5.94%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.96%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	2.97%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.98%
Anaerobic Media	Engineered → Lab Enrichment → Defined Media → Anaerobic Media	0.99%

Habitat	Taxonomy	Distribution
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	29.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.87%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	11.88%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	9.90%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	6.93%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	5.94%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	5.94%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	4.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.96%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.98%
Unclassified	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	13.86%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	11.88%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	10.89%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	9.90%
Marine	Environmental → Aquatic → Marine → Coastal → Sediment → Marine	8.91%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	5.94%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Sediment	5.94%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	5.94%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	4.95%
Mangrove Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment → Mangrove Sediment	4.95%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.96%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	1.98%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	1.98%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	1.98%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	1.98%
Worm Burrow	Environmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow	0.99%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.99%
Marine Sediment	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine Sediment	0.99%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.99%
Marine Sediment	Engineered → Lab Enrichment → Defined Media → Anaerobic Media → Unclassified → Marine Sediment	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003449	Marine sediment microbial communities from Douglas Channel, Canada, that are oil-degrading - Sample S9-DC07C	Environmental	Open in IMG/M
3300004023	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordA_D2	Environmental	Open in IMG/M
3300004026	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordC_D2	Environmental	Open in IMG/M
3300004147	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - White_CordA_D2	Environmental	Open in IMG/M
3300005182	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordA_D2	Environmental	Open in IMG/M
3300005215	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Tolay_CordB_D2	Environmental	Open in IMG/M
3300005601	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1	Environmental	Open in IMG/M
3300005609	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.1	Environmental	Open in IMG/M
3300005920	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd00.2	Environmental	Open in IMG/M
3300006467	Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935	Environmental	Open in IMG/M
3300007102	Combined Assembly of Marine Sediment Inoculum and Enrichments	Engineered	Open in IMG/M
3300007778	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG	Environmental	Open in IMG/M
3300007784	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_D1_MG	Environmental	Open in IMG/M
3300008416	Sea floor sediment microbial communities from Gulf of Mexico Methane Seep - MPC12B	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009035	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_D1_MG	Environmental	Open in IMG/M
3300009138	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_D2_MG	Environmental	Open in IMG/M
3300009488	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00607 metaG	Environmental	Open in IMG/M
3300009506	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_8	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300009788	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaG	Environmental	Open in IMG/M
3300010392	Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300010413	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_9	Environmental	Open in IMG/M
3300010430	Marine sediment microbial communities from Gulf of Thailand under amendment with organic carbon and nitrate - JGI co-assembly of 8 samples	Environmental	Open in IMG/M
3300011118	Deep subsurface microbial communities from Aarhus Bay to uncover new lineages of life (NeLLi) - Aarhus_00045 metaG	Environmental	Open in IMG/M
3300011262	Marine sediment microbial communities from Japan Sea near Toyama Prefecture, Japan - 2015_5, total	Environmental	Open in IMG/M
3300022201	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_21	Environmental	Open in IMG/M
3300022202	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_21	Environmental	Open in IMG/M
3300022206	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_24	Environmental	Open in IMG/M
3300022217	Sediment microbial communities from San Francisco Bay, California, United States - SF_May12_sed_USGS_24	Environmental	Open in IMG/M
3300022218	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_13	Environmental	Open in IMG/M
3300022308	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_24	Environmental	Open in IMG/M
3300024265	Deep subsurface microbial communities from Indian Ocean to uncover new lineages of life (NeLLi) - Sumatra_00157 metaG (SPAdes)	Environmental	Open in IMG/M
3300024340 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_5	Environmental	Open in IMG/M
3300024519 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_27	Environmental	Open in IMG/M
3300024529 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_21	Environmental	Open in IMG/M
3300025561	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025883	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - COGITO 998_met_11 (SPAdes)	Environmental	Open in IMG/M
3300026099	Salt pond soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_D1_MG (SPAdes)	Environmental	Open in IMG/M
3300026138	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027820	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes)	Environmental	Open in IMG/M
3300027837 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_3	Environmental	Open in IMG/M
3300027845	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.2 (SPAdes)	Environmental	Open in IMG/M
3300027856 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_23	Environmental	Open in IMG/M
3300027865 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_21	Environmental	Open in IMG/M
3300027868 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_22	Environmental	Open in IMG/M
3300027881 (restricted)	Seawater microbial communities from Jervis Inlet, British Columbia, Canada - JV7_2_27	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300027978	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd00.1 (SPAdes)	Environmental	Open in IMG/M
3300029827	Marine sediment microbial communities from Barataria Bay, New Orleans, USA to study impact of Deep Water Horizon explosion - M1047	Environmental	Open in IMG/M
3300032136	Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrow	Environmental	Open in IMG/M
3300032251	Coastal sediment microbial communities from Oude Bieten Haven, Netherlands - site A anoxic	Environmental	Open in IMG/M
3300032262	Coastal sediment microbial communities from Maine, United States - Cross River sediment 1	Environmental	Open in IMG/M
3300033429	Coastal sediment microbial communities from Maine, United States - Merrow Island sediment 2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DC07C_10697762	3300003449	Marine Sediment	MNYLTDREKDLIKYKKQYLELVYKITRLQLSGEDPPGKLLKQMQEIGRAAEIPETFLRSI
Ga0055441_102505151	3300004023	Natural And Restored Wetlands	MNYLTDREKELIKYKKQYLNLVYKITRLQLSGEDPPEELLKKAQEIGHTAKIPEMFLKSILLSLW*
Ga0055443_101538152	3300004026	Natural And Restored Wetlands	MTDREKELIKYKKQYLNLVNQITRLQLAGENPSKELLRQTQEIGRVAEIPETFLKKL*
Ga0055443_101670042	3300004026	Natural And Restored Wetlands	MTDREKELIKYKKQYLNLVNQITRLQLSGKNPPEKLLKQTQEIGRVAEIPETFLKSILP*
Ga0055443_101905272	3300004026	Natural And Restored Wetlands	MNYLTDREKELIKYKKQYLNLVYKITRLQLSGEDPPEELLKKVQKIGCTAKIPEMFLKSILLSLW*
Ga0055515_101389901	3300004147	Natural And Restored Wetlands	MTDREKELIKYKKQYLNLVNQIIRLQLSGKNPPEKLLKQTQEIGRVAEIPETFLKSILP*
Ga0069000_100631741	3300005182	Natural And Restored Wetlands	TDREKELIKYKKQYLNLVNQITRLQLAGENPSKELLRQTQEIGRVAEIPETFLKKL*
Ga0069000_102086041	3300005182	Natural And Restored Wetlands	TDREKELIKYKKQYLNLINQITRLQLAGENPPEELLKTAQEIAHTAEIPETFLKTL*
Ga0069001_101782382	3300005215	Natural And Restored Wetlands	MADREKELIKYQKRYLYLVNKISKLQLSGENPPEELLKKAREIGRRGHIPEAFFKTF*
Ga0069001_101867022	3300005215	Natural And Restored Wetlands	SYMTDREKELIKYKKQYLNLVNQITRLQLAGENPSKELLRQTQEIVRVAEIPETFLKKL*
Ga0070722_105096471	3300005601	Marine Sediment	MTDREKKLIKYKKQYLYLVNKITRLQLSGKNPPEKLLKQAQKIAQTAEIPETFL*
Ga0070724_105633321	3300005609	Marine Sediment	MNYLTEREKDLIDYKKQYLELVYKITRLQLSGEDPPEKLLKQVQEIGRAAEIPETFLRSI
Ga0070725_103251441	3300005920	Marine Sediment	MTDREKEIIKYQKQYLNLVSKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFFKTF*
Ga0099972_135914482	3300006467	Marine	MTDREKKLIKYKKQYLYLVNKITRLQLSGKNLPEELLKQAQEIAHAAEIPETFLKTLYL*
Ga0102541_10538912	3300007102	Marine Sediment	MNYLTDREKELIKYKKQYLNLVYKITQLQLSGEDPPEELLKKAQNIGRTAKIPEMFLKSILLSLW*
Ga0102954_11290831	3300007778	Water	MTDREKEIIKYQKQYLNLVNKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFYKTF*
Ga0102955_10037812	3300007784	Soil	MNYLTDREKELIKYKKQYLNLVYKITRLQLSGEDPPEELLKKVQKIGCTAKIPETFLKSILL*
Ga0115362_1000468801	3300008416	Sediment	LTDREKXLIKYXKQYLNLVTKITRLQLSGENLPKELIKQTQEIGRAAEIPETFLKTL*
Ga0115362_1021519722	3300008416	Sediment	MADREKELIKYKKQYLNLVNKITQLQLSGENLPEELLKQAQEIARAAEIPETFLKSILV*
Ga0102957_13929791	3300009027	Pond Water	MTDREKELIKYKKQYLNLINQITRLQLAGENPPEELLKTAQEIAHTAEIPETFLKTL*
Ga0102958_11738831	3300009035	Soil	MNYLTDREKDLINYKKQYLELVYKITRLQLSGEDPPEELLKKVQKIGCTAKIPEMFLKSILLSLW*
Ga0102959_13537533	3300009138	Soil	MNYLTDREKELIKYKKQYLNLVYKITQLQLSGEDPPEELLKKVQKIGCTAKIPEMFLKSILLSLW*
Ga0114925_110603072	3300009488	Deep Subsurface	MNYLTDQEKELIKYQKQYLNLVYKITRLQLSGENPTEELLKQAHEIGRTAEIPETFLKSILL*
Ga0118657_101489572	3300009506	Mangrove Sediment	MYKLTDREKELIKCKKQYLRLVNQITRLQLSGKNPPEELVKKAQEIGSIAEIPETFLKSILS*
Ga0118657_102909145	3300009506	Mangrove Sediment	VTNLTDREKELIKYKKEYLKLVNQITRFQLSGKNPPEELLKKTQEIGSNAEIPETFLKSILS*
Ga0118657_107030472	3300009506	Mangrove Sediment	LTDREKELINYHKQYLNLVNQITRLQLAGKNFPEELLKQTQDISQAAEIPETFLKSIWP*
Ga0118657_108262011	3300009506	Mangrove Sediment	MYKLTDREKELIKYKKQYLNLVNQITRLQLSGKNPPEELVKKTQEIESSAEIPETFLKSILL*
Ga0118657_116009381	3300009506	Mangrove Sediment	MTNLTDREKELIKYHKQYLNLVNQITRIQLSGKNPPEELLKQTQDISRAAEIPETFLKSILS*
Ga0123573_105076432	3300009509	Mangrove Sediment	MYKLTDREKELIKYKKQYLGLVNQITRLQLSGKNPPEELVKKAQEIGSIAEIPETFLKSILL*
Ga0123573_106227832	3300009509	Mangrove Sediment	MHKLTDREKELIKYKKKYLNLVNQITRLQLAGKNPPEELLKKAQETGSSAEIPETFLKSILL*
Ga0123573_112786002	3300009509	Mangrove Sediment	MYKLTDREKELIKYKKQYLNLVNQITQLQLSGKNPPEELVKKTQEIGSSAEIPETFLKSILL*
Ga0123573_112974492	3300009509	Mangrove Sediment	MTKLTDREKELIKCKKQYLNLVNQITRLQLSGKNVPEELVKKAQQIASIAEVPETF
Ga0114923_106248321	3300009788	Deep Subsurface	MTDREKELIKYKKQYLNLVNKITQLQLSGENLPEELLKQAQEIARAAEIPETFLKSIL
Ga0114923_108498782	3300009788	Deep Subsurface	MDYLTDQEKKLIKYQKQYLNLVNKITRLQLSGENPPEELLKQAQEIGHAAEIPETF*
Ga0118731_1025246742	3300010392	Marine	MTDREKELIKYKKQYMNLVNKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFYKTF*
Ga0118731_1026427562	3300010392	Marine	MTDREKELIKYKKQYLYLVNIITRIQLSGKNPPEKLLKQAQEIAQAAEIPETFLKSILV*
Ga0118731_1040998862	3300010392	Marine	LIKYKKQYLYLVNKITRFQLSGKNPPEKLLKQAKEIAKAAEIPETFLKSILL*
Ga0118731_1067072551	3300010392	Marine	MTDREKELIKYKKQYLKLVNIITRIQLSGKNPPEELIKQAQEIARTAEIPETFLKSILL*
Ga0118731_1068890262	3300010392	Marine	MSYMTDREKEIIKYQKQYLNLVSKITRLQLSGENPPEELLKNAQEIGRKGQIPEAFFKTF
Ga0118731_1073554601	3300010392	Marine	MTDREKKLIKCKKQYLYLVNKITRLQLSGKNLPEELLKQAREIGHAAEIPETFLKKLYL*
Ga0118731_1090976881	3300010392	Marine	MTDREKKIIKYQKQYLNLVSKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFFKTF*
Ga0118731_1111942571	3300010392	Marine	MTDREKELIKYQEQYLNLVNEITRIHLSGKYPPEKLLKQAQEIGRKDQIPEAFFRTF*
Ga0136852_104179712	3300010412	Mangrove Sediment	MHKLTDREKELIKYKKKYLNLVNQITRLQLAGKNPPEELLKKAQETGSRAEIPETFLKSILL*
Ga0136851_1000884214	3300010413	Mangrove Sediment	MTKLTDREKELIKYKKQYLNLVNQITRLQLSGKNVPEELVKKAQQIASIAEVPETFLKSMLS*
Ga0136851_101023085	3300010413	Mangrove Sediment	MTKLTDREKELMKYKKQYLNLVNQITRLQLSGKNPPEELVKKMQEIGELLKFQKHF*
Ga0136851_101856613	3300010413	Mangrove Sediment	MTNLSDREKELIKYHKQYLNLVNQITRLQLSGKNPPEELLKQTQDISRAAEIPETFLESILS*
Ga0136851_101907261	3300010413	Mangrove Sediment	MYKLTDREKELIKYKKQYLGLVNQITRLQLAGKNPPEELVKKTQEIGSSAEIPETFLKSILL*
Ga0136851_105739492	3300010413	Mangrove Sediment	MTKLTDREKELIRYKKQYLNLVNQITRLQLSGKNVPEELVKEVQQIASIAEVPETFLKSILS*
Ga0136851_123027191	3300010413	Mangrove Sediment	MHKLTDREKELIKYKKQYLNLVNQITRLQLSGKNPPEELVKKTQEIGSIAEIPETFLKSILL*
Ga0118733_1014349582	3300010430	Marine Sediment	MTNREKELIKDKKQYLKLVNKITRIQLSGKNPPEELIKQVQEKARAAEIPET
Ga0118733_1015378533	3300010430	Marine Sediment	MNYLTDREKDLIKYKKQYLELVYKITRFQLSGEVPPEKLLKQVQEIGRAAEIPETFLRSI
Ga0118733_1051028222	3300010430	Marine Sediment	MRYMADREKEIIKYQKQYLNLVSKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFYKTF
Ga0118733_1059179451	3300010430	Marine Sediment	MTDREKELIKYQEQYLNLVNEITRIHLSGKYPPEKLLKQAQEIGRKGQIPEAFFRTF*
Ga0118733_1060543461	3300010430	Marine Sediment	NREKELIKDKKQYLKLVNKITRIQLSGKNPPEELIKQAQEIARTAEIPETFLKSILL*
Ga0118733_1066813322	3300010430	Marine Sediment	MNDLTDREKELIKYKKQYLNLVYKITRLQLSGEDPPEELLKKAQEIGHTAKIPEMFLKSILL*
Ga0118733_1080497901	3300010430	Marine Sediment	MNNLTDREKKLIKYKKQYLYLVNKITRFQLSGKNPPEKLLKQAKEIAKAAEIPETFLKSILL*
Ga0114922_109236452	3300011118	Deep Subsurface	MTDREKEIIKYQKQYLKLVNKITRLHLSGENPPEELLKTAQEIGRKGQIPEAFYKTF*
Ga0151668_10399591	3300011262	Marine	MSYMTDREKELIKYKKQYLNLVNKITRLHLSGENPPEELLKTAQEIGRKGQIPEAFYKTF
Ga0151668_10594132	3300011262	Marine	MNYMTDREKELIKYKKQYLKLVNKITRIQLSGKNPPEELIKQAQEIARAAEIPETFLKSILL*
Ga0224503_100194113	3300022201	Sediment	MNYLTDREKELIKYKKQYLNLVYKITRLQLSGEDPPEELLKKVQKIGCTAKIPETFLKSILL
Ga0224503_100428003	3300022201	Sediment	MNYLTDREKDLINYKKQYLELVYKITRLQLSGEDPPEKLLKQVQEIGRAAEIPETFLRSI
Ga0224503_100720322	3300022201	Sediment	MNYLTDREKELIKYKKQYLNLVYKITQLQLSGEDPPEELLKKAQNIGRTAKIPEMFLKSILLSLW
Ga0224503_102628051	3300022201	Sediment	MTDREKELIKYKKQYLNLINQITRLQLAGENPPEELLKTAQEIAHTAEIPETFLKTL
Ga0224498_100381752	3300022202	Sediment	MTDREKELIKYKKQYLNLVNQITRLQLAGENPSKELLRQTQEIGRVAEIPETFLKKL
Ga0224498_100880092	3300022202	Sediment	MSYMTDREKEIIKYQKQYLNLVNKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFYKTF
Ga0224498_101297022	3300022202	Sediment	MNYLTDREKELIKYKKQYLNLVYKITRLQLSGEDPPEELLKKVQKIGCTAKIPEMFLKSILLSLW
Ga0224498_102100081	3300022202	Sediment	EQFDGSRKKLIKYKKQYLYLVNKINRFQLSGKNPPEKLLKQAKEIARAAEIPETFLKTL
Ga0224499_102076641	3300022206	Sediment	MTDREKEIIKYQKQYLNLVNKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFYKTF
Ga0224514_103278732	3300022217	Sediment	MNYLTDREKDLIKYKKQYLELVYKITRLQLSGEDPPEKLLKQVQEIGRAAEIPETFLRSI
Ga0224502_100386082	3300022218	Sediment	MADREKELIKYQKRYLYLVNKISKLQLSGENPPEELLKKAREIGRRGHIPEAFFKTF
Ga0224504_102515132	3300022308	Sediment	REKEIIKYQKQYLNLVNKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFYKTF
Ga0209976_105337862	3300024265	Deep Subsurface	LTDREKELIKYKKQYLNLVTKITRLQLSGENLPKELIKQTQEIGRAAEIPETFLKTL
(restricted) Ga0255042_100120423	3300024340	Seawater	MNYLTDQEKELIKYQKQYLNLVYKITRLQLSGENPTEELLKQAHEIGRTAEIPETFLKSILL
(restricted) Ga0255046_102852811	3300024519	Seawater	MSYMTDREKEIIKYQKQYLNLVSKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFYKTF
(restricted) Ga0255044_100786262	3300024529	Seawater	MTDREKELIKYKKQYMNLVNKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFYKTF
(restricted) Ga0255044_101599932	3300024529	Seawater	MTDREKELIKYKKQYLNLVNKITRLQLSGENPPEELLKQVQEISRAAEIPEEFLSAIL
(restricted) Ga0255044_101710891	3300024529	Seawater	MNYLTDQEKELIKYQKQYLNLVYKITRLQLSGENPTEELLKQAHEIGRTAEIPETFLKS
Ga0210119_10314182	3300025561	Natural And Restored Wetlands	MTDREKELIKYKKQYLNLVNQITRLQLSGKNPPEKLLKQTQEIGRVAEIPETFLKSILP
Ga0209456_100828691	3300025883	Pelagic Marine	MTDREKELIKYKNQYMNLVNKITQLQISGENPPEKLLKKAQEIGRKGQIPEAFFKIF
Ga0209920_10530862	3300026099	Soil	MSYMTDREKEIIKYQKQYLNLVNKITRLQLSGENPPEELLKTAQEIGRKGQIP
Ga0209951_10718732	3300026138	Pond Water	MTDREKELIKYKKQYLNLVNKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFYKTF
Ga0209578_103417352	3300027820	Marine Sediment	MTDREKEIIKYQKQYLNLVSKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFFKTF
(restricted) Ga0255041_101815652	3300027837	Seawater	MSYMTDREKEIIKYQKQYLNLVSKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFFKTF
Ga0209271_101504593	3300027845	Marine Sediment	MTDREKELIKYKKQYLYLVNIITRIQLSGKNPPEKLLKQAQEIGRAAEIPETFLRSI
(restricted) Ga0255054_100057267	3300027856	Seawater	MKDREKELIKYKKQYLKLVYKITRLQLSGKNPPEELRKWALEIARAAEIPETFLKSILL
(restricted) Ga0255054_106202802	3300027856	Seawater	MADREKELIKYKNQYLNLVNKITKLQLSGENPPEELLKKAQEIGRKGQIPEAFFKTF
(restricted) Ga0255052_102172591	3300027865	Seawater	MADREKELIKYKNQYLNLVNKITRLQLSGENPPEELLKKAQEIGRKGQIPEAFFKTF
(restricted) Ga0255053_100112227	3300027868	Seawater	VINKMKDREKELIKYKKQYLKLVYKITRLQLSGKNPPEELRKWAQEIARAAEIPETFLKSILL
(restricted) Ga0255053_104003052	3300027868	Seawater	MTDREKKLIKCKKQYLYLVNKITRLQLSGKNPPEDLLKQVQVIAHAAEIPETVLKSILL
(restricted) Ga0255055_100035719	3300027881	Seawater	MKDREKELIKYKKQYLKLVYKITRLQLSGKNPPEELRKWAQEIARAAEIPETFLKSILL
Ga0209536_1001197202	3300027917	Marine Sediment	MKHELPEDYSSDMTDQEKKLIKYKKQYLNLVNRITRLQLAGEDPPKELLKQTQEIGRIAKIPETVLKSILY
Ga0209536_1002024641	3300027917	Marine Sediment	MNHLTDREKDLVKYKKLYLELVYKITRLQLSGENPPEKLLKKAHEVAQAAEIPKSFLKTLQL
Ga0209165_100834312	3300027978	Marine Sediment	MRYMADREKEIIKYQKQYLNLVSKITRLQLSGENPPEELLKTAQEIGRKGQIPEAFFKTF
Ga0134606_101352432	3300029827	Marine Sediment	VTNLTDREKELIKYKKEYLKLVNQITRFQLSGKNPPEELLKKTQEIGSNAEIPETFLKSILS
Ga0316201_114061381	3300032136	Worm Burrow	MNYLTDREKELIKYKKQYLNLVYKITRLQLSGEDPPEELLKKVQKMGCTAKIPEMFLKSILLS
Ga0316198_107106042	3300032251	Sediment	MNYLTDREKELIKYKKQYLNLVYKITRLQLSGEDPPEELLKKAQEIGHTAKIP
Ga0316194_103939841	3300032262	Sediment	MTDREKKLIKYKKQYLYLVNKITRLQLSGKNLPEELLKQAQEIAHAAEIPETFLKTLYL
Ga0316194_105448472	3300032262	Sediment	MTEREKELIKYQKQYLNLVHKITRLQLSGKNPPGELLKQAQEIGRIAEIPETFLKTL
Ga0316194_105884271	3300032262	Sediment	MNYLTDREKDLIKYKKQYLKLVYKITRLQLSGEDPPEKLLKQVQEIGRAAEIPETFLRSI
Ga0316194_106244462	3300032262	Sediment	MNYLTDREKELIKYKKQYLNLVYKITRLQLSGEDPPEELLKKAQEIGHTAKIPEMFLKSILLSLW
Ga0316193_103469732	3300033429	Sediment	MNYLTDREKELIKYKKQYLNLVYKITRLQLSGEDPPEELLKKVQKMGCTAKIPEMFLKSILLSLW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters