Metagenome / Metatranscriptome Family F103301

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103301
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	118 residues
Representative Sequence	LKIPKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSVMSKEFSIELLSRRFAFYEETFIGKKLDTAHDLRMRSLRARDCLMNDLYFDTLKPVKE
Number of Associated Samples	75
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.20 %
% of genes near scaffold ends (potentially truncated)	52.48 %
% of genes from short scaffolds (< 2000 bps)	80.20 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (65.347 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (50.495 % of family members)
Environment Ontology (ENVO)	Unclassified (67.327 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (75.248 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.31% β-sheet: 0.00% Coil/Unstructured: 29.69%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF09588	YqaJ	13.86
PF00149	Metallophos	11.88
PF06945	DUF1289	2.97
PF04404	ERF	1.98
PF11351	GTA_holin_3TM	0.99
PF12236	Head-tail_con	0.99
PF13443	HTH_26	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3313	Predicted Fe-S protein YdhL, DUF1289 family	General function prediction only [R]	2.97

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.35 %
All Organisms	root	All Organisms	34.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.35 %
Viruses	superkingdom	All Organisms → Viruses	32.67 %
cellular organisms	root	All Organisms → cellular organisms	1.98 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	65.35 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	32.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000115\|DelMOSum2011_c10020999	All Organisms → Viruses → Predicted Viral	3098	Open in IMG/M
3300000117\|DelMOWin2010_c10014518	All Organisms → Viruses → Predicted Viral	4319	Open in IMG/M
3300001346\|JGI20151J14362_10064414	All Organisms → Viruses → Predicted Viral	1475	Open in IMG/M
3300004097\|Ga0055584_101982507	Not Available	597	Open in IMG/M
3300005512\|Ga0074648_1001227	Not Available	28157	Open in IMG/M
3300006025\|Ga0075474_10004593	Not Available	5614	Open in IMG/M
3300006026\|Ga0075478_10123669	Not Available	816	Open in IMG/M
3300006026\|Ga0075478_10199511	Not Available	611	Open in IMG/M
3300006027\|Ga0075462_10010903	All Organisms → Viruses → Predicted Viral	2937	Open in IMG/M
3300006029\|Ga0075466_1122286	Not Available	689	Open in IMG/M
3300006402\|Ga0075511_1717727	All Organisms → Viruses → Predicted Viral	1330	Open in IMG/M
3300006637\|Ga0075461_10099842	Not Available	914	Open in IMG/M
3300006802\|Ga0070749_10010614	Not Available	5965	Open in IMG/M
3300006802\|Ga0070749_10459621	Not Available	697	Open in IMG/M
3300006802\|Ga0070749_10624094	Not Available	580	Open in IMG/M
3300006810\|Ga0070754_10352889	Not Available	650	Open in IMG/M
3300006810\|Ga0070754_10513807	Not Available	514	Open in IMG/M
3300006867\|Ga0075476_10143342	Not Available	896	Open in IMG/M
3300006868\|Ga0075481_10218567	Not Available	677	Open in IMG/M
3300006868\|Ga0075481_10359015	Not Available	502	Open in IMG/M
3300006869\|Ga0075477_10274645	Not Available	674	Open in IMG/M
3300006870\|Ga0075479_10343430	Not Available	581	Open in IMG/M
3300006874\|Ga0075475_10315136	Not Available	642	Open in IMG/M
3300006916\|Ga0070750_10306517	Not Available	678	Open in IMG/M
3300006920\|Ga0070748_1114152	All Organisms → Viruses → Predicted Viral	1022	Open in IMG/M
3300007229\|Ga0075468_10090706	Not Available	980	Open in IMG/M
3300007234\|Ga0075460_10237512	Not Available	611	Open in IMG/M
3300007344\|Ga0070745_1315319	Not Available	554	Open in IMG/M
3300007344\|Ga0070745_1360284	Not Available	508	Open in IMG/M
3300007346\|Ga0070753_1088797	All Organisms → Viruses → Predicted Viral	1218	Open in IMG/M
3300007725\|Ga0102951_1026422	All Organisms → Viruses → Predicted Viral	1804	Open in IMG/M
3300007778\|Ga0102954_1016995	All Organisms → Viruses → Predicted Viral	2030	Open in IMG/M
3300009000\|Ga0102960_1228794	Not Available	660	Open in IMG/M
3300009001\|Ga0102963_1086935	Not Available	1278	Open in IMG/M
3300009001\|Ga0102963_1329328	Not Available	600	Open in IMG/M
3300009001\|Ga0102963_1351503	Not Available	579	Open in IMG/M
3300009027\|Ga0102957_1016871	All Organisms → Viruses → Predicted Viral	2486	Open in IMG/M
3300009193\|Ga0115551_1081317	All Organisms → Viruses → Predicted Viral	1540	Open in IMG/M
3300009423\|Ga0115548_1089455	Not Available	1019	Open in IMG/M
3300009426\|Ga0115547_1194328	Not Available	640	Open in IMG/M
3300009433\|Ga0115545_1002623	Not Available	8853	Open in IMG/M
3300009433\|Ga0115545_1039893	All Organisms → Viruses → Predicted Viral	1845	Open in IMG/M
3300009435\|Ga0115546_1037696	All Organisms → Viruses → Predicted Viral	1922	Open in IMG/M
3300009529\|Ga0114919_10034908	All Organisms → Viruses → Predicted Viral	3765	Open in IMG/M
3300010389\|Ga0136549_10009134	Not Available	6763	Open in IMG/M
3300017726\|Ga0181381_1117950	Not Available	557	Open in IMG/M
3300017756\|Ga0181382_1078011	Not Available	918	Open in IMG/M
3300017764\|Ga0181385_1128385	Not Available	773	Open in IMG/M
3300018080\|Ga0180433_10270947	All Organisms → Viruses → Predicted Viral	1349	Open in IMG/M
3300019751\|Ga0194029_1005309	All Organisms → Viruses → Predicted Viral	1731	Open in IMG/M
3300019765\|Ga0194024_1010484	All Organisms → Viruses → Predicted Viral	1934	Open in IMG/M
3300021375\|Ga0213869_10000483	Not Available	32815	Open in IMG/M
3300021389\|Ga0213868_10090566	All Organisms → Viruses → Predicted Viral	1994	Open in IMG/M
3300021958\|Ga0222718_10206679	Not Available	1068	Open in IMG/M
3300021958\|Ga0222718_10236122	Not Available	978	Open in IMG/M
3300021958\|Ga0222718_10242453	Not Available	961	Open in IMG/M
3300021958\|Ga0222718_10535068	Not Available	560	Open in IMG/M
3300021959\|Ga0222716_10027541	All Organisms → Viruses → Predicted Viral	4167	Open in IMG/M
3300021959\|Ga0222716_10143725	All Organisms → Viruses → Predicted Viral	1565	Open in IMG/M
3300021959\|Ga0222716_10511103	Not Available	673	Open in IMG/M
3300021959\|Ga0222716_10560825	Not Available	631	Open in IMG/M
3300021959\|Ga0222716_10761972	Not Available	506	Open in IMG/M
3300021964\|Ga0222719_10727074	Not Available	556	Open in IMG/M
3300022050\|Ga0196883_1004087	All Organisms → Viruses → Predicted Viral	1678	Open in IMG/M
3300022057\|Ga0212025_1021529	Not Available	1049	Open in IMG/M
3300022065\|Ga0212024_1024600	Not Available	1000	Open in IMG/M
3300022067\|Ga0196895_1003510	All Organisms → Viruses → Predicted Viral	1638	Open in IMG/M
3300022067\|Ga0196895_1015665	Not Available	830	Open in IMG/M
3300022068\|Ga0212021_1026429	All Organisms → Viruses → Predicted Viral	1115	Open in IMG/M
3300022069\|Ga0212026_1037871	Not Available	717	Open in IMG/M
3300022071\|Ga0212028_1019353	All Organisms → Viruses → Predicted Viral	1179	Open in IMG/M
3300022167\|Ga0212020_1043639	Not Available	761	Open in IMG/M
3300022168\|Ga0212027_1053491	Not Available	503	Open in IMG/M
3300022183\|Ga0196891_1086951	Not Available	552	Open in IMG/M
3300022187\|Ga0196899_1086366	Not Available	951	Open in IMG/M
3300022187\|Ga0196899_1125894	Not Available	733	Open in IMG/M
3300025632\|Ga0209194_1067746	Not Available	971	Open in IMG/M
3300025759\|Ga0208899_1002369	Not Available	12616	Open in IMG/M
3300025759\|Ga0208899_1004398	Not Available	8896	Open in IMG/M
3300025759\|Ga0208899_1006760	Not Available	6817	Open in IMG/M
3300025759\|Ga0208899_1145215	Not Available	819	Open in IMG/M
3300025803\|Ga0208425_1028630	All Organisms → Viruses → Predicted Viral	1450	Open in IMG/M
3300025803\|Ga0208425_1099516	Not Available	679	Open in IMG/M
3300025816\|Ga0209193_1018116	All Organisms → Viruses → Predicted Viral	2274	Open in IMG/M
3300025816\|Ga0209193_1069330	Not Available	932	Open in IMG/M
3300025853\|Ga0208645_1033330	All Organisms → Viruses → Predicted Viral	2642	Open in IMG/M
3300025853\|Ga0208645_1282872	Not Available	531	Open in IMG/M
3300025889\|Ga0208644_1216802	Not Available	817	Open in IMG/M
3300025892\|Ga0209630_10070844	All Organisms → Viruses → Predicted Viral	1981	Open in IMG/M
3300026187\|Ga0209929_1090684	Not Available	805	Open in IMG/M
3300027820\|Ga0209578_10219531	Not Available	901	Open in IMG/M
(restricted) 3300027861\|Ga0233415_10049543	All Organisms → Viruses → Predicted Viral	1754	Open in IMG/M
3300032253\|Ga0316206_1034667	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300032254\|Ga0316208_1004789	All Organisms → cellular organisms → Bacteria	8830	Open in IMG/M
3300032255\|Ga0316209_1011382	All Organisms → Viruses → Predicted Viral	4043	Open in IMG/M
3300032257\|Ga0316205_10072394	All Organisms → Viruses → Predicted Viral	1536	Open in IMG/M
3300032277\|Ga0316202_10064211	All Organisms → Viruses → Predicted Viral	1709	Open in IMG/M
3300034374\|Ga0348335_127737	Not Available	739	Open in IMG/M
3300034374\|Ga0348335_172838	Not Available	559	Open in IMG/M
3300034418\|Ga0348337_044848	All Organisms → Viruses → Predicted Viral	1848	Open in IMG/M
3300034418\|Ga0348337_168747	Not Available	590	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	87.13%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	9.90%
Freshwater	Environmental → Aquatic → Freshwater	1.98%
Sediment	Environmental → Aquatic → Sediment	0.99%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	58.42%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.90%
Pelagic	Environmental → Aquatic → Marine → Pelagic	8.91%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	8.91%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.95%
Strait	Environmental → Aquatic → Marine → Strait	2.97%
River	Environmental → Aquatic → Freshwater → River	1.98%
Oceanic	Environmental → Aquatic → Marine → Oceanic	0.99%
Inlet	Environmental → Aquatic → Marine → Inlet	0.99%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	52.48%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.90%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	8.91%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	7.92%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	5.94%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.98%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.99%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	0.99%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	0.99%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	50.50%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	9.90%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	8.91%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	5.94%
Microbial Mat	Environmental → Aquatic → Marine → Coastal → Sediment → Microbial Mat	4.95%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	2.97%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	2.97%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.98%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.98%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.98%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	1.98%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.99%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	0.99%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	0.99%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	0.99%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.99%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000115	Marine microbial communities from Delaware Coast, sample from Delaware MO Summer July 2011	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006029	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_20_<0.8_DNA	Environmental	Open in IMG/M
3300006402	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006637	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007229	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_30_<0.8_DNA	Environmental	Open in IMG/M
3300007234	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNA	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007725	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_B_H2O_MG	Environmental	Open in IMG/M
3300007778	Water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_H2O_MG	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009027	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG	Environmental	Open in IMG/M
3300009193	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321	Environmental	Open in IMG/M
3300009423	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100423	Environmental	Open in IMG/M
3300009426	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100420	Environmental	Open in IMG/M
3300009433	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330	Environmental	Open in IMG/M
3300009435	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300018080	Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaG	Environmental	Open in IMG/M
3300019751	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG	Environmental	Open in IMG/M
3300019765	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MG	Environmental	Open in IMG/M
3300021375	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO132	Environmental	Open in IMG/M
3300021389	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022050	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022065	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)	Environmental	Open in IMG/M
3300022067	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v3)	Environmental	Open in IMG/M
3300022068	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (v2)	Environmental	Open in IMG/M
3300022069	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2)	Environmental	Open in IMG/M
3300022071	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)	Environmental	Open in IMG/M
3300022167	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)	Environmental	Open in IMG/M
3300022168	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v2)	Environmental	Open in IMG/M
3300022183	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300025632	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100413 (SPAdes)	Environmental	Open in IMG/M
3300025759	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)	Environmental	Open in IMG/M
3300025803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025816	Pelagic marine microbial communities from North Sea - COGITO_mtgs_100330 (SPAdes)	Environmental	Open in IMG/M
3300025853	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300025892	Pelagic Microbial community sample from North Sea - COGITO 998_met_01 (SPAdes)	Environmental	Open in IMG/M
3300026187	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027820	Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdAd47.2 (SPAdes)	Environmental	Open in IMG/M
3300027861 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_12_MG	Environmental	Open in IMG/M
3300032253	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month pyrite	Environmental	Open in IMG/M
3300032254	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month chalcopyrite	Environmental	Open in IMG/M
3300032255	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 6-month chalcopyrite	Environmental	Open in IMG/M
3300032257	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrite	Environmental	Open in IMG/M
3300032277	Microbial mat bacterial communities from mineral coupon in-situ incubated in ocean water Damariscotta River, Maine, United States - 3-month pyrrhotite	Environmental	Open in IMG/M
3300034374	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)	Environmental	Open in IMG/M
3300034418	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSum2011_100209993	3300000115	Marine	LKILKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRTRDCLMNGLYFDTLKPIKE*
DelMOWin2010_100145187	3300000117	Marine	LKIPKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRTRDCLMNGLYFDTLKPIKE*
JGI20151J14362_100644142	3300001346	Pelagic Marine	LKILKLKIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRARDCLMNGLYFDTLKPIKE*
Ga0055584_1019825072	3300004097	Pelagic Marine	LKILKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRS
Ga0074648_100122714	3300005512	Saline Water And Sediment	LRIPKLKIVNKEKVEDELSQELTQDEIKLLNETRRAFTDKEISYIEKNKPYLLASNQKEDIRDITNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE*
Ga0075474_1000459310	3300006025	Aqueous	LKKRKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSLMSKEFSIELLSRRFAFYEETFIGKKLDTAHDLRMRSLRARDCLMNDLYFDTLKPVKE*
Ga0075478_101236692	3300006026	Aqueous	LKTPKLKIVNKEKVKESLAEELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFPLMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE*
Ga0075478_101995112	3300006026	Aqueous	LRIPKLKIVNKEKVKEALACELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYE
Ga0075462_100109033	3300006027	Aqueous	LKTPKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEETLIGRKVDTAHDLRMRSLRARDCLMNDFYFDTLKPVKE*
Ga0075466_11222862	3300006029	Aqueous	DELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRTRDCLMNGLYFDTLKPIKE*
Ga0075511_17177274	3300006402	Aqueous	LKIPKLKIVNKEKVKEALACELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLS
Ga0075461_100998421	3300006637	Aqueous	LKIVNKEKVKEALACELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE*
Ga0070749_1001061413	3300006802	Aqueous	LKIPKLRIINTEKAAESLSGDLTPNEIKNLNGSKRAFTDKEISYIEKNKPYLLASNQREDIRDISDSGFSLMSKEFSIELLSRRFAFYEDTLIGKKVDTAQELRARSLKTRDCLMNGLYFDTLKSVKE*
Ga0070749_104596212	3300006802	Aqueous	LRIPKLKIVNKEKVKEALACELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE*
Ga0070749_106240941	3300006802	Aqueous	KEALACELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEETLIGRKVDTAHDLRMRSLRARDCLMNDFYFDTLKPVKE*
Ga0070754_103528892	3300006810	Aqueous	LKTPKLKIVNKEKVKESLAEELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFPLMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMND
Ga0070754_105138072	3300006810	Aqueous	LKTPKLKIVNKEKVKEALAEELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDFYFDTLKPVKE*
Ga0075476_101433422	3300006867	Aqueous	NEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE*
Ga0075481_102185672	3300006868	Aqueous	LKTPKLKIVNKEKVKESLAEELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFPLMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMN
Ga0075481_103590152	3300006868	Aqueous	LKIPKLKIVNKEKVKEALACELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGK
Ga0075477_102746451	3300006869	Aqueous	LRIPKLKIVNKEKVKEALACELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKA
Ga0075479_103434301	3300006870	Aqueous	ELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDFYFDTLKPVKE*
Ga0075475_103151362	3300006874	Aqueous	LRIPKLKIVNKEKVKEALACELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTAND
Ga0070750_103065172	3300006916	Aqueous	LKTPKLKIVNKEKVKESLAEELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFPLMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKA
Ga0070748_11141522	3300006920	Aqueous	LKTPKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISHIEKNKPYLLACNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEETLIGRKVDTAHDLRMRSLRARDCLMNDFYFDTLKPVKE*
Ga0075468_100907062	3300007229	Aqueous	LKILKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEILYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRTRDCLMNGLYFDTLKPIKE*
Ga0075460_102375122	3300007234	Aqueous	PKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSLMSKEFSIELLSRRFAFYEETFIGKKLDTAHDLRMRSLRARDCLMNDLYFDTLKPVKE*
Ga0070745_13153192	3300007344	Aqueous	LRIPKLKIVNKEKVKEALACELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKS
Ga0070745_13602841	3300007344	Aqueous	LKIPKLKIVNKEKVKEALACELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKS
Ga0070753_10887972	3300007346	Aqueous	LKKRKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSLMSKEFSIELLSRRFAFYKDTFIGKKLDTAHDLRMRSLRARDCLMNDLYFDTLKPVKE*
Ga0102951_10264222	3300007725	Water	LKTRKLKIVNKEKVKEALAEELTPNEKKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFSIMSKEFSIELLSRRFAFYEETFIGKKLDTAHDLRMRSLRARDCLMNGLYFDTLKPVKE*
Ga0102954_10169954	3300007778	Water	LKIPKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSVMSKEFSIELLSRRFAFYEETFIGKKLDTAHDLRMRSLRARDCLMNGLYFDTLKPVKE*
Ga0102960_12287941	3300009000	Pond Water	LKIPKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSLMSKEFSIELLSRRFAFYEETFIGKKLETAHDLRMRSL
Ga0102963_10869352	3300009001	Pond Water	LKIPRLKIFDKQRLGESLSDELTPHEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQREDIREIINSGFSLMSKEFSIELLSKRFAFHKTMFIGKNVDTAQDIRVRSLRARDCLMNGLYFDTLKPIKE*
Ga0102963_13293281	3300009001	Pond Water	STLKKRKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSVMSKEFSIELLSRRFAFYEETFIGKKLDTAHDLRMRSLRARDCLMNDLYFDTLKPVKE*
Ga0102963_13515032	3300009001	Pond Water	LRIPKLKIVNKEKVEDALSQELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE*
Ga0102957_10168711	3300009027	Pond Water	LKIPKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSVMSKEFSIELLSRR
Ga0115551_10813172	3300009193	Pelagic Marine	LKILKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLPASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRARDCLMNGLYFDTLKPIKE*
Ga0115548_10894552	3300009423	Pelagic Marine	LKIPKLKIFDRQKVKESLTKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFSLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRARDCLMNGLYFDTLKPIKE*
Ga0115547_11943281	3300009426	Pelagic Marine	LKILKLKIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQD
Ga0115545_100262310	3300009433	Pelagic Marine	LKIPKLKIFDRQKVKESLTKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRARDCLMNGLYFDTLKPIKE*
Ga0115545_10398932	3300009433	Pelagic Marine	LKIPKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSVMSKEFSIELLSRRFAFYEETFIGKKLDTAHDLRMRSLRARDCLMNDLYFDTLKPVKE*
Ga0115546_10376965	3300009435	Pelagic Marine	LKILKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRARDCLMNGLYFDTLKPIKE*
Ga0114919_100349088	3300009529	Deep Subsurface	LKIPKLKIVNKEKVEDVLSQELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMTNSGFSVMSREFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE*
Ga0136549_100091344	3300010389	Marine Methane Seep Sediment	LKIPKLKIVNKEKVKEALAEELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE*
Ga0181381_11179501	3300017726	Seawater	EALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEETLIGRKVDTAHDLRMRSLRARDCLMNDFYFDTLKPVKE
Ga0181382_10780111	3300017756	Seawater	LKTPKLKIVNKEKVKESLAEELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFPLMSKEFSIELLSRRFAFYEETLIGRKVDTAHDLRMRSLRARDCLMNDFYFDTLKPVKE
Ga0181385_11283852	3300017764	Seawater	LKIPKLKIVNKEKVKEALDDELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIREISDGGFSVMSKGFSLMLLAKRFAFYEETLTGKKIDTTHDLRMRSLKARDCLRNDLYFDTLKPIKEKEE
Ga0180433_102709472	3300018080	Hypersaline Lake Sediment	LRIPKLKIVNKEKVKEALAEELTPNEMNLLDESRRAFTDKEISYIEKNKPYLLASNQKEDIRDITNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE
Ga0194029_10053092	3300019751	Freshwater	LKTPKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEETLIGRKVDTAHDLRMRSLRARDCLMNDFYFDTLKPVKE
Ga0194024_10104844	3300019765	Freshwater	LKKRKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSLMSKEFSIELLSRRFAFYEETFIGKKLETAHDLRMRSLRARDCLMNDLYFDTLKPVKE
Ga0213869_1000048314	3300021375	Seawater	LKIPKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRTRDCLMNGLYFDTLKPIKE
Ga0213868_100905663	3300021389	Seawater	LKILKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRTRDCLMNGLYFDTLKPIKE
Ga0222718_102066791	3300021958	Estuarine Water	LKKRKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSVMSKEFSIELLSRRFAFYEETFIGKKLDTAHDLRMRSLRARDCLMNDLYFDTLKPVKE
Ga0222718_102361222	3300021958	Estuarine Water	EHRESTLKTRKLKIVDKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLALNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEETFIGKKLETAHDLRMRSLRARDCLMNGLYFDTLRPVKE
Ga0222718_102424532	3300021958	Estuarine Water	LKTRKLKIVNKEKVKEALAEELTPNEKKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFSIMSKEFSIELLSRRFAFYEETFIGKKLDTAHDLRMRSLRARDCLMNGLYFDTLKPVKE
Ga0222718_105350682	3300021958	Estuarine Water	LKTRKLKIVDKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLALNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEETFIGKKLETAHDLRMRSLRARDCLMNGLYFDTL
Ga0222716_100275414	3300021959	Estuarine Water	LKIPKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRARDCLMNGLYFDTLKPIKE
Ga0222716_101437254	3300021959	Estuarine Water	LKTRKLKIVNKEKVKEALAEELTKNEIKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEE
Ga0222716_105111032	3300021959	Estuarine Water	LKTRKLKIVDKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLALNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEETFIGKKLETAHDLRMRSLRARDCLMNGLYFDTLRPVKE
Ga0222716_105608252	3300021959	Estuarine Water	LKKRKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSVMSKEFSIELLSRRFAFYEETFIGKKLDTAHDLRMRSLRARDCLMNGLYFDTLKPVKE
Ga0222716_107619722	3300021959	Estuarine Water	LKIPKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSVMSKEFSIELLSRRFAFYEETFIGKKLETAHDLRMRSLKARDC
Ga0222719_107270742	3300021964	Estuarine Water	LKTRKLKIVNKEKVKEALAEELTKNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSVMSKEFSIELLSRRFAFYEETFIGKKLETAHDLRMRSLKARDCLMNDLY
Ga0196883_10040871	3300022050	Aqueous	KRGNTLKKRKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSLMSKEFSIELLSRRFAFYEETFIGKKLDTAHDLRMRSLRARDCLMNDLYFDTLKPVKE
Ga0212025_10215291	3300022057	Aqueous	LKTPKLKIVNKEKVKESLAEELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFPLMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE
Ga0212024_10246001	3300022065	Aqueous	KTPKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEETLIGRKVDTAHDLRMRSLRARDCLMNDFYFDTLKPVKE
Ga0196895_10035102	3300022067	Aqueous	LKKRKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSLMSKEFSIELLSRRFAFYEETFIGKKLDTAHDLRMRSLRARDCLMNDLYFDTLKPVKE
Ga0196895_10156652	3300022067	Aqueous	LRIPKLKIVNKEKVKEALACELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE
Ga0212021_10264291	3300022068	Aqueous	LRIPKLKIVNKEKVKEALACELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFY
Ga0212026_10378711	3300022069	Aqueous	LKTPKLKIVNKEKVKESLAEELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFPLMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARD
Ga0212028_10193533	3300022071	Aqueous	LRIPKLKIVNKEKVKEALACELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKAR
Ga0212020_10436392	3300022167	Aqueous	LKTPKLKIVNKEKVKESLAEELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE
Ga0212027_10534912	3300022168	Aqueous	LKTPKLKIVNKEKVKESLAEELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGK
Ga0196891_10869511	3300022183	Aqueous	LKIVNKEKVKEALACELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE
Ga0196899_10863662	3300022187	Aqueous	LKTPKLKIVNKEKVKEALAEELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDFYFDTLKPVKE
Ga0196899_11258942	3300022187	Aqueous	LRIPKLKIVNKEKVKEALACELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDC
Ga0209194_10677463	3300025632	Pelagic Marine	LKILKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVR
Ga0208899_10023694	3300025759	Aqueous	LKIPKLRIINTEKAAESLSGDLTPNEIKNLNGSKRAFTDKEISYIEKNKPYLLASNQREDIRDISDSGFSLMSKEFSIELLSRRFAFYEDTLIGKKVDTAQELRARSLKTRDCLMNGLYFDTLKSVKE
Ga0208899_10043982	3300025759	Aqueous	LRIPKLKIVNKEKVKEALACELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEETLIGRKVDTAHDLRMRSLRARDCLMNDFYFDTLKPVKE
Ga0208899_10067601	3300025759	Aqueous	LKTPKLKIVNKEKVKESLAEELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFPLMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYF
Ga0208899_11452152	3300025759	Aqueous	LKTPKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE
Ga0208425_10286301	3300025803	Aqueous	LKIPKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFY
Ga0208425_10995162	3300025803	Aqueous	VNKEKVKEALACELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEETLIGRKVDTAHDLRMRSLRARDCLMNDFYFDTLKPVKE
Ga0209193_10181163	3300025816	Pelagic Marine	LKIPKLKIFDRQKVKESLTKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRARDCLMNGLYFDTLKPIKE
Ga0209193_10693302	3300025816	Pelagic Marine	LKIPKLKIVNKEKVKEALAEELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDIGNSGFSVMSKEFSIELLSRRFAFYEETFIGKKLDTAHDLRMRSLRARDC
Ga0208645_10333306	3300025853	Aqueous	LKILKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQD
Ga0208645_12828722	3300025853	Aqueous	LKIPKLKIVNKEKVKEALACELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTAND
Ga0208644_12168022	3300025889	Aqueous	GNTLKTPKLKIVNKEKVKEALACELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLACNQKEDIRDITNSGFSLMSKEFSIELLSRRFAFYEETLIGRKVDTAHDLRMRSLRARDCLMNDFYFDTLKPVKE
Ga0209630_100708442	3300025892	Pelagic Marine	LKILKLKIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRARDCLMNGLYFDTLKPIKE
Ga0209929_10906841	3300026187	Pond Water	LGESLSDELTPHEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQREDIREIINSGFSLMSKEFSIELLSKRFAFHKTMFIGKNVDTAQDIRVRSLRARDCLMNGLYFDTLKPIKE
Ga0209578_102195311	3300027820	Marine Sediment	KILKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRTRDCLMNGLYFDTLKPIKE
(restricted) Ga0233415_100495435	3300027861	Seawater	LKIPRLKIFDKQRLGESLSDELTLYEIKNLNQSRKAFTNKEISYIEKHKPYLLASNQREDIREIINSGFSLMSKEFSIELLSKRFAFHQTMFIGKNVDTAQDIRVRSLRARDCLMNGLYFDTLKPIKE
Ga0316206_10346674	3300032253	Microbial Mat	LKIPKLRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKGFSIELLSRRFAFYQTMFIGKNVDTAQDLRVR
Ga0316208_100478910	3300032254	Microbial Mat	LKIPKLRIFDRQKVKESLADELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRARDCLMNGLYFDTLKPIKE
Ga0316209_10113826	3300032255	Microbial Mat	LKIPKLRIFDRQKVKESLADELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKGFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRARDCLMNGLYFDTLKPIKE
Ga0316205_100723942	3300032257	Microbial Mat	LRIFDRQKVKESLTDELTPYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRTRDCLMNGLYFDTLKPIKE
Ga0316202_100642112	3300032277	Microbial Mat	PYEIKNLNQSRKAFTNKEISYIEKNKPYLLASNQKEDIREIINSGFPLMSKEFSIELLSRRFAFYQTMFIGKNVDTAQDLRVRSLRTRDCLMNGLYFDTLKPIKE
Ga0348335_127737_431_739	3300034374	Aqueous	LRIPKLKIVNKEKVKEALACELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDL
Ga0348335_172838_282_557	3300034374	Aqueous	LKIPKLKIVNKEKVKEALACELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTL
Ga0348337_044848_1267_1653	3300034418	Aqueous	LKIPKLKIVNKEKVKEALACELTQNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFYEDTLIGKSVDTANDLRMRSLKARDCLMNDLYFDTLKQVKE
Ga0348337_168747_327_590	3300034418	Aqueous	LRIPKLKIVNKEKVKEALACELTPNEMKLLNESRRAFTDKEISYIEKNKPYLLASNQKEDIRDMRNSGFSVMSKEFSIELLSRRFAFY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters