Metagenome Family F103363

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103363
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	75 residues
Representative Sequence	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTGAATQDDPITTGSVRPTPRDPPAAAKAAPDDELKLGK
Number of Associated Samples	90
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	88.12 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	92.08 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (74.257 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (39.604 % of family members)
Environment Ontology (ENVO)	Unclassified (44.554 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.594 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 33.33% β-sheet: 0.00% Coil/Unstructured: 66.67%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00557	Peptidase_M24	4.95
PF03450	CO_deh_flav_C	0.99
PF00501	AMP-binding	0.99
PF06240	COXG	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG3427	Carbon monoxide dehydrogenase subunit CoxG	Energy production and conversion [C]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.26 %
Unclassified	root	N/A	25.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.26 %
Unclassified	root	N/A	25.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.26 %
Unclassified	root	N/A	25.74 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.34 %
Unclassified	root	N/A	25.74 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.97 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	66.34 %
Unclassified	root	N/A	25.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.97 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	47.52 %
Unclassified	root	N/A	25.74 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9.90 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.97 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	44.55 %
Unclassified	root	N/A	25.74 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	5.94 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.97 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	1.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	44.55 %
Unclassified	root	N/A	25.74 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	5.94 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.97 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	1.98 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	44.55 %
Unclassified	root	N/A	25.74 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	5.94 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.97 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	44.55 %
Unclassified	root	N/A	25.74 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	5.94 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	2.97 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	0.99 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459016\|G1P06HT01B6DBG	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1044259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300004633\|Ga0066395_10838766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300005166\|Ga0066674_10009717	All Organisms → cellular organisms → Bacteria	3943	Open in IMG/M
3300005166\|Ga0066674_10403196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300005167\|Ga0066672_10215750	Not Available	1227	Open in IMG/M
3300005332\|Ga0066388_100899681	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300005332\|Ga0066388_106141892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300005406\|Ga0070703_10051917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1313	Open in IMG/M
3300005468\|Ga0070707_101677800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300005471\|Ga0070698_100716961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	943	Open in IMG/M
3300005552\|Ga0066701_10638186	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300005552\|Ga0066701_10640417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	643	Open in IMG/M
3300005555\|Ga0066692_10168080	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300005562\|Ga0058697_10108379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1162	Open in IMG/M
3300005576\|Ga0066708_10448863	Not Available	828	Open in IMG/M
3300005587\|Ga0066654_10027664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2331	Open in IMG/M
3300005598\|Ga0066706_10002515	All Organisms → cellular organisms → Bacteria	7906	Open in IMG/M
3300005713\|Ga0066905_100176871	All Organisms → cellular organisms → Bacteria	1570	Open in IMG/M
3300006050\|Ga0075028_100569979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300006354\|Ga0075021_11163601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	506	Open in IMG/M
3300006755\|Ga0079222_10096622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	1539	Open in IMG/M
3300006804\|Ga0079221_11092193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	609	Open in IMG/M
3300006871\|Ga0075434_101517609	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	679	Open in IMG/M
3300006880\|Ga0075429_101982864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300006914\|Ga0075436_101166512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	581	Open in IMG/M
3300006954\|Ga0079219_11295761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300009176\|Ga0105242_11364035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	735	Open in IMG/M
3300010047\|Ga0126382_12080170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	543	Open in IMG/M
3300010359\|Ga0126376_11787658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	652	Open in IMG/M
3300010373\|Ga0134128_11102493	Not Available	876	Open in IMG/M
3300010396\|Ga0134126_10991575	Not Available	941	Open in IMG/M
3300010398\|Ga0126383_11197855	Not Available	849	Open in IMG/M
3300012205\|Ga0137362_10006697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	8084	Open in IMG/M
3300012206\|Ga0137380_10293279	Not Available	1459	Open in IMG/M
3300012209\|Ga0137379_11112826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300012354\|Ga0137366_10494757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	883	Open in IMG/M
3300012361\|Ga0137360_10314664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1303	Open in IMG/M
3300012361\|Ga0137360_11883399	Not Available	504	Open in IMG/M
3300012955\|Ga0164298_10896860	Not Available	645	Open in IMG/M
3300012972\|Ga0134077_10300868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300014487\|Ga0182000_10528536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300015359\|Ga0134085_10056339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1579	Open in IMG/M
3300016341\|Ga0182035_10897545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	782	Open in IMG/M
3300016357\|Ga0182032_10807150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	793	Open in IMG/M
3300016445\|Ga0182038_10827561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	813	Open in IMG/M
3300021405\|Ga0210387_10337465	Not Available	1330	Open in IMG/M
3300025906\|Ga0207699_10385673	Not Available	995	Open in IMG/M
3300025929\|Ga0207664_10685025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	922	Open in IMG/M
3300026334\|Ga0209377_1104592	Not Available	1168	Open in IMG/M
3300026469\|Ga0257169_1021425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	919	Open in IMG/M
3300026538\|Ga0209056_10446393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300026551\|Ga0209648_10228235	Not Available	1397	Open in IMG/M
3300027873\|Ga0209814_10200841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	861	Open in IMG/M
3300028716\|Ga0307311_10275610	Not Available	503	Open in IMG/M
3300028814\|Ga0307302_10674198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	514	Open in IMG/M
3300028878\|Ga0307278_10522013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300031544\|Ga0318534_10289093	Not Available	944	Open in IMG/M
3300031546\|Ga0318538_10036759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2324	Open in IMG/M
3300031561\|Ga0318528_10081008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1684	Open in IMG/M
3300031564\|Ga0318573_10463826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	681	Open in IMG/M
3300031564\|Ga0318573_10487450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	663	Open in IMG/M
3300031572\|Ga0318515_10233421	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	986	Open in IMG/M
3300031573\|Ga0310915_10063799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2409	Open in IMG/M
3300031573\|Ga0310915_10537813	Not Available	829	Open in IMG/M
3300031640\|Ga0318555_10117914	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1409	Open in IMG/M
3300031679\|Ga0318561_10124946	Not Available	1369	Open in IMG/M
3300031680\|Ga0318574_10559078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300031681\|Ga0318572_10341588	Not Available	887	Open in IMG/M
3300031719\|Ga0306917_11023487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	644	Open in IMG/M
3300031720\|Ga0307469_10041920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2790	Open in IMG/M
3300031723\|Ga0318493_10350579	Not Available	802	Open in IMG/M
3300031740\|Ga0307468_100834411	Not Available	790	Open in IMG/M
3300031747\|Ga0318502_10576755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300031764\|Ga0318535_10319331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300031769\|Ga0318526_10161082	Not Available	913	Open in IMG/M
3300031770\|Ga0318521_10657027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300031781\|Ga0318547_10095983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1685	Open in IMG/M
3300031782\|Ga0318552_10403830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300031793\|Ga0318548_10291635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	801	Open in IMG/M
3300031796\|Ga0318576_10343322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300031890\|Ga0306925_11318164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	716	Open in IMG/M
3300031896\|Ga0318551_10343816	Not Available	843	Open in IMG/M
3300031912\|Ga0306921_11977870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300031946\|Ga0310910_10529289	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	935	Open in IMG/M
3300031947\|Ga0310909_10689286	Not Available	849	Open in IMG/M
3300031981\|Ga0318531_10114123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1196	Open in IMG/M
3300032001\|Ga0306922_10636239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1127	Open in IMG/M
3300032041\|Ga0318549_10101007	Not Available	1257	Open in IMG/M
3300032059\|Ga0318533_10310310	Not Available	1145	Open in IMG/M
3300032065\|Ga0318513_10235484	Not Available	885	Open in IMG/M
3300032065\|Ga0318513_10310379	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	766	Open in IMG/M
3300032067\|Ga0318524_10218630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	976	Open in IMG/M
3300032068\|Ga0318553_10030261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2585	Open in IMG/M
3300032068\|Ga0318553_10447638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300032089\|Ga0318525_10446298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	662	Open in IMG/M
3300032089\|Ga0318525_10625864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	548	Open in IMG/M
3300032090\|Ga0318518_10066008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1753	Open in IMG/M
3300032090\|Ga0318518_10265758	Not Available	880	Open in IMG/M
3300032090\|Ga0318518_10287137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	844	Open in IMG/M
3300033290\|Ga0318519_10308491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	928	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.07%
Host-Associated	Host-Associated	5.94%
Engineered	Engineered	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.09%
Plants	Host-Associated → Plants	5.94%
Aquatic	Environmental → Aquatic	1.98%
Solid Waste	Engineered → Solid Waste	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.95%
Sediment	Environmental → Aquatic → Sediment	1.98%
Phylloplane	Host-Associated → Plants → Phylloplane	0.99%
Grass	Engineered → Solid Waste → Grass	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.18%
Loam	Environmental → Terrestrial → Soil → Loam	8.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.99%
Composting	Engineered → Solid Waste → Grass → Composting	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	49.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	11.88%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.95%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.97%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.99%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	39.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.93%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.96%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.97%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.99%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459016	Litter degradation ZMR2	Engineered	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2ZMR_01030970	2170459016	Switchgrass, Maize And Mischanthus Litter	MGARATRVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAAQDDPIATGSVRPTPRDPPAAAKASPDDELSLGKKYFQAGNFGLA
AP72_2010_repI_A100DRAFT_10442591	3300000837	Forest Soil	MGARAARVLLATVACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPATTGSVRPTPRDPPAAAAKASP
Ga0066395_108387661	3300004633	Tropical Forest Soil	MKARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPITTGSVRPTPRDPPAAAAKAAPDDELSLGKKYFQ
Ga0066674_100097171	3300005166	Soil	MRARAIRVLAATVSCLFWLNGCETSTRLGDLFQSNTAATQGVASQEDPPTTGSVRPTAHTPASPAKASPDKDDDVSLGKTYFRAGTFNLAER
Ga0066674_104031961	3300005166	Soil	MGARAARVLLATVACLLWLNGCESSTRLGDLFQSKADTGAAAQDDPATTGSVRPTPRDPPAAKAAPADDLSLGKKHFQAG
Ga0066672_102157501	3300005167	Soil	MRARAVRVLAATVSCLFWLNGCETSTRLGDLFQSNTAATQGVASQEDPPTTGSVRPTALTPASPAKASPDKDDDV
Ga0066388_1008996812	3300005332	Tropical Forest Soil	MKARALRVVVATVACLLWLNGCETSTRLGDMFQSTAQTATSQDDPASTGSVRPNPRPAASTAAAPASPDPNDDVSLGKKYFRAGNFSLAER
Ga0066388_1061418921	3300005332	Tropical Forest Soil	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTAATAQDDPITTGSVRPTPRDPPAAAKAAPDDELKLGKKYFQAGNF
Ga0070703_100519173	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MGARATRVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPITTGSVRPTPPDPPAAAKASPDDELSL
Ga0070707_1016778002	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGARATRVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPITTGSVRPTPRDPPAAAK
Ga0070698_1007169612	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRARAVRVLAATVSCLFWLNGCETSTRLGDLFQSNTAATQGLASQEDPPTTGSVRPAAHTPSSPAANASPAKDDDVSLGKSYFRAGNFSLAE
Ga0066701_106381862	3300005552	Soil	MRARAVRVLVATVACLLWLNGCETSTRLGDLFQSKTEASQGGASQDDPVTTGSLPPASPKPSSAAAKASPDK
Ga0066701_106404171	3300005552	Soil	MRARAVRVLAATVSCLFWLNGCETSTRLGDLFQSNTAATQGVASQEDPPTTGSVRPTAHTPASPAKASPDKDDDV
Ga0066692_101680803	3300005555	Soil	MGARATRVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAAQDDPIATGTVRPTPRDPPAAAKASPDDELSLGKKYFQAGNFGLAE
Ga0058697_101083792	3300005562	Agave	MRARAARVLVATVACLLWLNGCETSTKLGDLFQSKTEASQNASQDDPVTTGSLPPASPKPSTAAAKASLDKNDDVSLGKK
Ga0066708_104488632	3300005576	Soil	MRARALRVIVATVACLLWLNGCESSTRLGDMFQSNTAATPGASQDDPAITGSLPPKPRERTSAAAAPPSSDPNDD
Ga0066654_100276643	3300005587	Soil	VLAATVSCLFWLNGCETSTRLGDLFQSNTAATQGVASQEDPPTTGSVRPTAHTPASPAKASPDKDDDVSLGKTYFRAGTFNLAER
Ga0066706_100025151	3300005598	Soil	MRARAVRVLAATVSCLFWLNGCETSTRLGDLFQSNTAATQGVASQEDPPTTGSVRPTAHTPASPAKASPDKDDDVSLGKTYFRAGTFNLAE
Ga0066905_1001768711	3300005713	Tropical Forest Soil	MRARAARVLVATVACLLWLNGCETSTRLGDLFQSKTEASQAGASQDDPVTTGSLPPASPKPSTAAAKASLDKNDDVSLGKKHFRDG
Ga0075028_1005699791	3300006050	Watersheds	MGARATRVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPITTGSVRPTPRDPPAAAKASPDDELSLGKKYFQ
Ga0075021_111636012	3300006354	Watersheds	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPITTGSVRPTPPDPPAA
Ga0079222_100966221	3300006755	Agricultural Soil	MRARALRVVVATVACLLWLNGCETSTRLGDMFQSNTAATPGASHDDPMTTGSLPPKPREGTSAAATAPASDPNDDV
Ga0079221_110921931	3300006804	Agricultural Soil	MLGRRGNTPMGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPITTGSVRPTPRDPPAAAKPSPDDELSL
Ga0075434_1015176091	3300006871	Populus Rhizosphere	MRARAARVLVATVACLLWLNGCETSTRLGDLFQSKTEASQNASQDDPVTTGSLPPASPKPSTAAAKASRDTNKASPDKDDDVSLGK
Ga0075429_1019828641	3300006880	Populus Rhizosphere	MGARATRVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAAQDDPITTGSVRPAPRDPPAAAKASPDDELSLGKKYFQAGNFG
Ga0075436_1011665121	3300006914	Populus Rhizosphere	MGARATRVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAAQDDPITTGSVRPAPRDPPAAAKASPDD
Ga0079219_112957611	3300006954	Agricultural Soil	MRARALRVVVATVACLLWLNGCESSTRLGDMFQSNTATTPGASQDDPAITGSLPPKQREGKSAAAA
Ga0105242_113640352	3300009176	Miscanthus Rhizosphere	MRAQALRVVVATVACLLWLNGCESSTRLGDMFQSNTATTQGASQDDPAITGSLPPKSREGAPAAAAPRSSDPNDDVSLGKK
Ga0126382_120801701	3300010047	Tropical Forest Soil	MGARAARVLLATVACLLWLNGCETSTRLGDLFQSKADTGAAAQDDPATTGSVRPTPRDPPAA
Ga0126376_117876583	3300010359	Tropical Forest Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQNDPITTGSVRPPPRDPPAA
Ga0134128_111024931	3300010373	Terrestrial Soil	MRAQALRVVVATVACLLWLNGCESSTRLGDMFQSNTAATQGASQDDPAITGSLPPKSREGAPAAAA
Ga0134126_109915751	3300010396	Terrestrial Soil	MRAQALRVVVATVACLLWLNGCESSTRLGDMFQSNTSATQGASQDDPAITGSVPPKPREGAPTAAAP
Ga0126383_111978552	3300010398	Tropical Forest Soil	MGARAARVLLATVACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPATTGSVRPTPRDPPAAAAAKALP
Ga0137362_100066971	3300012205	Vadose Zone Soil	VLAATVSCLFWLNGGESSTRLGDLFQSNTAATQGLASQEDPPTTGSVWPAARTPSSAAAK
Ga0137380_102932793	3300012206	Vadose Zone Soil	MGARATRVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAAQDDPIATGTVRPTPRDPPAAAKASPDDELSLG
Ga0137379_111128261	3300012209	Vadose Zone Soil	LWLNGCETSTRLGDLFQAKTEASQAGASQDDPVTTGSLPPASPKPSTAAAKAPSDKNDDGSLGKKHFRDGNFS
Ga0137366_104947572	3300012354	Vadose Zone Soil	LWLNGCETSTRLGDLFQAKTEASQAGASQDDPVTTGSLPPASPKPSTAAAKAPSDKNDDGSLGKKHFRDG
Ga0137360_103146641	3300012361	Vadose Zone Soil	VLAATVSCLFWLNGCETSTRLGDLFQSNTAATQGLASQEDPPTTGSVRPAARTPSSAAAKASPDKDDDVSLGKTY
Ga0137360_118833991	3300012361	Vadose Zone Soil	VLAATVSCLFWLNGCESSTRLGDLFQSNTAATQGLASQEDPPTTGSVRPAARTPSSAAAKASPDKDDDVSLGKTY
Ga0164298_108968601	3300012955	Soil	MRAQALRVVVATVACLLWLNGCESSTRLGDMFQSNTSATQGASQDDPAITGSVPPKPREGAPTAAAPRSSDPNDDVSLGKK
Ga0134077_103008681	3300012972	Grasslands Soil	MRARAVRVLAATVSCLFWLNGCETSTRLGDLFQSNTAATQGVASQEDPPTTGSVRPTAHTPASPAKASPDKDDDVSLGKTYFRAGSRF
Ga0182000_105285361	3300014487	Soil	LWLNGCETSTRLGDLFQSKTEASQNASQDDPVTTGSLPLASPKPSTAAAKASLDKNDDVSLGKKH
Ga0134085_100563391	3300015359	Grasslands Soil	VLAATVSCLFWLNGCETSTRLGDLFQSNTAATQGVASQEDPPTTGSVRPTAHTPASPAKASPDKDDDVSLGKTYFRAGN
Ga0182035_108975451	3300016341	Soil	MGARAARVLLATVACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPATTGSVRPTPRDPPAATAAKAAPDDELSLGKKH
Ga0182032_108071502	3300016357	Soil	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTAATAQDDPITTGSVRPTPRDPPAAAKAAPDDELKLGK
Ga0182038_108275611	3300016445	Soil	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTAATAQDDPITTGSVRPTPRDPPAAAKAAPDDELKLGKKYFQAGN
Ga0210387_103374652	3300021405	Soil	MRAQALRVVVATVACLLWLNGCESSTRLGDMFQSNTAATQGGSQDDPAITGSLPPKPREGVSVAAAPPSSDP
Ga0207699_103856732	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRAQALRVVVATVACLLWLNGCESSTRLGDMFQSNTAATQGASQDDPAITGSLPPKSREGAPAAAAPRSSDPNDDVSLGK
Ga0207664_106850251	3300025929	Agricultural Soil	MGARATRVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPITTGSVRPTPRDPPAAAKASPDDELSLGKKYFQAGNF
Ga0209377_11045921	3300026334	Soil	MGARATRVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAAQDDPIATGSVRPTPRDPPAAAKASPDDELSL
Ga0257169_10214253	3300026469	Soil	MGARATRVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPITTGSVRPTPRDPPAAAKASPDDELSLGKK
Ga0209056_104463931	3300026538	Soil	MVARAARVLLATVACLLWLNGCESSTRLGDLFQSKADTGAAAQDDPATTGSVRPTPRDPPAATAAKAAPADDLSLGKKHFQ
Ga0209648_102282352	3300026551	Grasslands Soil	MRARALRVLAATVSCLFWLNGCESSTRLGDLFQSNTAATQGLASQEDPPTTGSVRPAARTPSPAAAKASPDKDDDVSLGKTYFRAGDFS
Ga0209814_102008411	3300027873	Populus Rhizosphere	MRARAARVLVATVACLLWLNGCETSTRLGDLFQAKTEASQGGASQDDPATTGSVRVAPQNTSSVAAKVATDKDNDVSLGKKYF
Ga0307311_102756101	3300028716	Soil	MRAQALRVVVATVACLLWLNGCESSTRLGDMFQSNTAATQGASQDDPAITGSLPPKSREGAPAAAAPRSSDPNDDVS
Ga0307302_106741981	3300028814	Soil	MGARAARVLLATVACLLWLNGCETSTRLGDMFQSNTGATQGAASQDDPATTGSVRLTPRDAMPAAAAKASSDPNDDVSLGKKH
Ga0307278_105220131	3300028878	Soil	MGARAARVLLATVACLLWLNGCETSTRLGDMFQSNTGATQGVASQDDPATTGSVRLTPRDATPAAAAKASSDPNDDVSLGKKH
Ga0318534_102890932	3300031544	Soil	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTGAATQDDPITTGSVRPTPRDPPAAAKAAPDDELKLGK
Ga0318538_100367593	3300031546	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAASDDELKLGKKYFQ
Ga0318528_100810083	3300031561	Soil	MGARAARVLLATVACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPATTGSVRPTPRDPPTAAAKTSPNDDLSLGKKHFQ
Ga0318573_104638262	3300031564	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAASDDELK
Ga0318573_104874502	3300031564	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAA
Ga0318515_102334211	3300031572	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAASDDELKLGKKYFQAG
Ga0310915_100637993	3300031573	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAASDDELKLGKKY
Ga0310915_105378132	3300031573	Soil	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTAATAQDDPITTGSVRPTPRDPPAAAKAAPDD
Ga0318555_101179141	3300031640	Soil	MKARALRVVVATVACLLWLNGCETSTRLGDIFQSTAQTVASQDDPGSTGSVRPSPREAAPTAAARASPDPNDD
Ga0318561_101249462	3300031679	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAASDDELN
Ga0318574_105590782	3300031680	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAASDDELKLGK
Ga0318572_103415882	3300031681	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKA
Ga0306917_110234872	3300031719	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAA
Ga0307469_100419204	3300031720	Hardwood Forest Soil	MRAQALRVVVATVACLLWLNGCESSTRLGDMFQSNTAATQGASQDDPAITGSLPPKSREGAPAAAAPRSSDPNDDVSLGKKYF
Ga0318493_103505792	3300031723	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAATDDE
Ga0307468_1008344112	3300031740	Hardwood Forest Soil	MRAQALRVVVATVACLLWLNGCESSTRLGDMFQSNTAATQGASQDDPAITGSLPPKSREGAPAAAAPRSSDPNDDVSLG
Ga0318502_105767552	3300031747	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAASDD
Ga0318535_103193312	3300031764	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAATDDELKLGKKY
Ga0318526_101610822	3300031769	Soil	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTGAATQDDPITTGSVRPTPRDPPATAKA
Ga0318521_106570271	3300031770	Soil	MKARALRVVVATVACLLWLNGCETSTRLGDMFQSTAQTAASQDDPGSTGSVRPSPREAAPTAAAR
Ga0318547_100959833	3300031781	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPVAAK
Ga0318552_104038301	3300031782	Soil	MKARALRVVVATVACLLWLNGCETSTRLGDMFQSTAQTAASQDDPGSTGSVRPSPREAAPTAAARASPDPNDDVSLGKKY
Ga0318548_102916351	3300031793	Soil	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTAATAQDDPITTGSVRPTPRDPPAAAKAAPDDELKLGKKYFQ
Ga0318576_103433221	3300031796	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAATDDELKLGKKYFQA
Ga0306925_113181642	3300031890	Soil	MGARAARVLLATVACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPATTGSVRPTPRDPPTAAAKASPNDDLSLGKKHFQAGNFSL
Ga0318551_103438161	3300031896	Soil	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTGAATQDDPITTGSVRPTPRDPPAAAKAAPDDELKLG
Ga0306921_119778703	3300031912	Soil	MRARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPITTGSVRPTPRDPPAAAKASPD
Ga0310910_105292892	3300031946	Soil	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTGAATQDDPITTGSVRPTPRDPPAAAKAAPDDELKLGKKHFQAG
Ga0310909_106892861	3300031947	Soil	MAACLLWLNGCESSTRLGDLFQSKADTGAATQDDPITTGSVRPTPRDPPAAAKAAPDDELKL
Ga0318531_101141231	3300031981	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAASDDELKLGKKYFQA
Ga0306922_106362391	3300032001	Soil	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTGAATQDDPITTGSVRPTPRDPPAAAKAAPDDELKLGKKYFQAGNFNLAERH
Ga0318549_101010071	3300032041	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAK
Ga0318533_103103102	3300032059	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSMRPPPRDPPAAAK
Ga0318513_102354841	3300032065	Soil	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTGAATQDDPITTGSVRPTPRDPPAAAKAAPDDEL
Ga0318513_103103791	3300032065	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAASDDELKLGKKYF
Ga0318524_102186301	3300032067	Soil	MAACLLWLNGCESSTRLGDLFQSKADTGAASQDNPITTGSVRPTPRDPPAAAKAAPDDELKLGKKYFQAGNFNLA
Ga0318553_100302613	3300032068	Soil	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPITTGSVRPAPRDPPAAAKT
Ga0318553_104476381	3300032068	Soil	MGARAARVLLATVACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPATTGSVRPTPRDPPTAAAKASPNDDLSLGKKHF
Ga0318525_104462981	3300032089	Soil	MGARAARVLLAMAACLLWLNGCESSTRLGDLFQSKADTGAASQDNPITTGSVRPTPRDPPAAAKAAPDDELKLGKKYFQAGNFN
Ga0318525_106258641	3300032089	Soil	MGARAARVLLATVACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPATTGSVRPTPRDPPTAAAKASPND
Ga0318518_100660083	3300032090	Soil	MGARAARVLLATAACLLWLNGCETSTRLGDLFQSTADTGAATQDDPITTGSVRPPPRDPPAAAKAASDDELKL
Ga0318518_102657582	3300032090	Soil	MGARAARVLLATVACLLWLNGCESSTRLGDLFQSKADTGAAVQDDPATTGSVRPTPRDPPTAAAKT
Ga0318518_102871371	3300032090	Soil	MGARAARVLLATAACLLWLNGCESSTRLGDLFQSKADTAATAQDDPITTGSVRPTPRDPPAAAKAAPDDELKLGKKYFQAGNFS
Ga0318519_103084911	3300033290	Soil	MAACLLWLNGCESSTRLGDLFQSKADTGAASQDNPITTGSVRPTPRDPPAAAKAAPDDELKLGKKYF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103363

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences