NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F103449

Metagenome Family F103449

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103449
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 105 residues
Representative Sequence WGVVRPWDGTGEQVANLILYDQPTEPAGATSGYLGLTRENVQVTYQPSSAARPDDEVLSVAIVNYRYRFLSPWITQTFVNPRPVLITSPMAYKAPL
Number of Associated Samples 82
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 4.95 %
% of genes near scaffold ends (potentially truncated) 93.07 %
% of genes from short scaffolds (< 2000 bps) 89.11 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.65

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere
(13.861 % of family members)
Environment Ontology (ENVO) Unclassified
(53.465 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.396 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 12.10%    β-sheet: 21.77%    Coil/Unstructured: 66.13%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.65
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF06245DUF1015 71.29
PF00535Glycos_transf_2 3.96
PF13484Fer4_16 2.97
PF13181TPR_8 1.98
PF04389Peptidase_M28 1.98
PF01790LGT 0.99
PF04014MazE_antitoxin 0.99
PF01261AP_endonuc_2 0.99
PF07811TadE 0.99
PF02738MoCoBD_1 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG4198Uncharacterized conserved protein, DUF1015 familyFunction unknown [S] 71.29
COG0682Prolipoprotein diacylglyceryltransferaseCell wall/membrane/envelope biogenesis [M] 0.99

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2007427000|2007559845All Organisms → cellular organisms → Bacteria → Acidobacteria741Open in IMG/M
3300001213|JGIcombinedJ13530_100786723All Organisms → cellular organisms → Bacteria → Acidobacteria795Open in IMG/M
3300004019|Ga0055439_10324492All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300004092|Ga0062389_101012998All Organisms → cellular organisms → Bacteria → Acidobacteria1015Open in IMG/M
3300004114|Ga0062593_102746797All Organisms → cellular organisms → Bacteria → Acidobacteria561Open in IMG/M
3300005329|Ga0070683_101217074All Organisms → cellular organisms → Bacteria → Acidobacteria724Open in IMG/M
3300005344|Ga0070661_101193472All Organisms → cellular organisms → Bacteria → Acidobacteria636Open in IMG/M
3300005435|Ga0070714_101067032All Organisms → cellular organisms → Bacteria → Acidobacteria787Open in IMG/M
3300005439|Ga0070711_100606092All Organisms → cellular organisms → Bacteria → Acidobacteria914Open in IMG/M
3300005458|Ga0070681_10393379All Organisms → cellular organisms → Bacteria → Acidobacteria1297Open in IMG/M
3300005458|Ga0070681_10436932All Organisms → cellular organisms → Bacteria → Acidobacteria1221Open in IMG/M
3300005530|Ga0070679_101888496All Organisms → cellular organisms → Bacteria → Acidobacteria546Open in IMG/M
3300005534|Ga0070735_10166569All Organisms → cellular organisms → Bacteria → Acidobacteria1361Open in IMG/M
3300005538|Ga0070731_10911461All Organisms → cellular organisms → Bacteria → Acidobacteria582Open in IMG/M
3300005614|Ga0068856_101153425All Organisms → cellular organisms → Bacteria → Acidobacteria792Open in IMG/M
3300005618|Ga0068864_100314880All Organisms → cellular organisms → Bacteria → Acidobacteria1468Open in IMG/M
3300005842|Ga0068858_100019068All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae6417Open in IMG/M
3300005843|Ga0068860_101359603All Organisms → cellular organisms → Bacteria → Acidobacteria731Open in IMG/M
3300006041|Ga0075023_100031031All Organisms → cellular organisms → Bacteria → Acidobacteria1571Open in IMG/M
3300006057|Ga0075026_101024138All Organisms → cellular organisms → Bacteria → Acidobacteria515Open in IMG/M
3300006059|Ga0075017_100210751All Organisms → cellular organisms → Bacteria → Acidobacteria1409Open in IMG/M
3300006102|Ga0075015_100853888All Organisms → cellular organisms → Bacteria → Acidobacteria549Open in IMG/M
3300006237|Ga0097621_101543610All Organisms → cellular organisms → Bacteria → Acidobacteria631Open in IMG/M
3300006638|Ga0075522_10032968All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3127Open in IMG/M
3300009093|Ga0105240_10105170All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3427Open in IMG/M
3300009093|Ga0105240_10513167All Organisms → cellular organisms → Bacteria → Acidobacteria1331Open in IMG/M
3300009093|Ga0105240_11899974All Organisms → cellular organisms → Bacteria → Acidobacteria619Open in IMG/M
3300009093|Ga0105240_11935353All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M
3300009098|Ga0105245_10013658All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7074Open in IMG/M
3300009098|Ga0105245_10023003All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5468Open in IMG/M
3300009098|Ga0105245_11644192All Organisms → cellular organisms → Bacteria → Acidobacteria694Open in IMG/M
3300009148|Ga0105243_10019778All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia5105Open in IMG/M
3300009174|Ga0105241_10036697All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3690Open in IMG/M
3300009174|Ga0105241_11081678All Organisms → cellular organisms → Bacteria → Acidobacteria754Open in IMG/M
3300009174|Ga0105241_11479323All Organisms → cellular organisms → Bacteria → Acidobacteria653Open in IMG/M
3300009177|Ga0105248_12394698All Organisms → cellular organisms → Bacteria → Acidobacteria601Open in IMG/M
3300009545|Ga0105237_11144684All Organisms → cellular organisms → Bacteria → Acidobacteria785Open in IMG/M
3300009551|Ga0105238_10439160All Organisms → cellular organisms → Bacteria → Acidobacteria1301Open in IMG/M
3300010373|Ga0134128_10142019All Organisms → cellular organisms → Bacteria2716Open in IMG/M
3300010375|Ga0105239_13109826All Organisms → cellular organisms → Bacteria → Acidobacteria541Open in IMG/M
3300011271|Ga0137393_11427780All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300012019|Ga0120139_1124797All Organisms → cellular organisms → Bacteria → Acidobacteria659Open in IMG/M
3300012199|Ga0137383_11349590All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300012202|Ga0137363_11554853All Organisms → cellular organisms → Bacteria → Acidobacteria553Open in IMG/M
3300012205|Ga0137362_11415060All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300012210|Ga0137378_10593256All Organisms → cellular organisms → Bacteria → Acidobacteria1018Open in IMG/M
3300012211|Ga0137377_11535422All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300012357|Ga0137384_10181277All Organisms → cellular organisms → Bacteria → Acidobacteria1763Open in IMG/M
3300012923|Ga0137359_11105318All Organisms → cellular organisms → Bacteria → Acidobacteria678Open in IMG/M
3300012931|Ga0153915_12895582All Organisms → cellular organisms → Bacteria → Acidobacteria560Open in IMG/M
3300013104|Ga0157370_11701649All Organisms → cellular organisms → Bacteria → Acidobacteria566Open in IMG/M
3300013296|Ga0157374_11527889All Organisms → cellular organisms → Bacteria → Acidobacteria691Open in IMG/M
3300013296|Ga0157374_11963732All Organisms → cellular organisms → Bacteria → Acidobacteria611Open in IMG/M
3300013297|Ga0157378_10339132All Organisms → cellular organisms → Bacteria → Acidobacteria1465Open in IMG/M
3300013306|Ga0163162_11078594All Organisms → cellular organisms → Bacteria → Acidobacteria910Open in IMG/M
3300013306|Ga0163162_11374127All Organisms → cellular organisms → Bacteria → Acidobacteria803Open in IMG/M
3300013306|Ga0163162_13441083All Organisms → cellular organisms → Bacteria → Acidobacteria504Open in IMG/M
3300013503|Ga0120127_10112372All Organisms → cellular organisms → Bacteria → Acidobacteria621Open in IMG/M
3300014493|Ga0182016_10028807All Organisms → cellular organisms → Bacteria4728Open in IMG/M
3300014838|Ga0182030_10400943All Organisms → cellular organisms → Bacteria → Acidobacteria1429Open in IMG/M
3300014969|Ga0157376_13137037All Organisms → cellular organisms → Bacteria → Acidobacteria501Open in IMG/M
3300015195|Ga0167658_1013777All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus2396Open in IMG/M
3300018090|Ga0187770_10572207All Organisms → cellular organisms → Bacteria → Acidobacteria897Open in IMG/M
3300020580|Ga0210403_11024190All Organisms → cellular organisms → Bacteria → Acidobacteria645Open in IMG/M
3300021086|Ga0179596_10685456All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M
3300021559|Ga0210409_11093434All Organisms → cellular organisms → Bacteria → Acidobacteria672Open in IMG/M
3300025560|Ga0210108_1040658All Organisms → cellular organisms → Bacteria → Acidobacteria879Open in IMG/M
3300025862|Ga0209483_1042758All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter2174Open in IMG/M
3300025912|Ga0207707_11126216All Organisms → cellular organisms → Bacteria → Acidobacteria638Open in IMG/M
3300025913|Ga0207695_10927542All Organisms → cellular organisms → Bacteria → Acidobacteria750Open in IMG/M
3300025914|Ga0207671_11572454All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300025924|Ga0207694_10150219All Organisms → cellular organisms → Bacteria → Acidobacteria1876Open in IMG/M
3300025924|Ga0207694_10416535All Organisms → cellular organisms → Bacteria → Acidobacteria1119Open in IMG/M
3300025927|Ga0207687_10176610All Organisms → cellular organisms → Bacteria → Acidobacteria1651Open in IMG/M
3300025927|Ga0207687_11170733All Organisms → cellular organisms → Bacteria → Acidobacteria661Open in IMG/M
3300025929|Ga0207664_10509755All Organisms → cellular organisms → Bacteria → Acidobacteria1078Open in IMG/M
3300025934|Ga0207686_10098108All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus1950Open in IMG/M
3300025934|Ga0207686_10342722All Organisms → cellular organisms → Bacteria → Acidobacteria1123Open in IMG/M
3300025941|Ga0207711_11136482All Organisms → cellular organisms → Bacteria → Acidobacteria722Open in IMG/M
3300025949|Ga0207667_11913848All Organisms → cellular organisms → Bacteria → Acidobacteria555Open in IMG/M
3300026041|Ga0207639_10448995All Organisms → cellular organisms → Bacteria → Acidobacteria1170Open in IMG/M
3300026078|Ga0207702_11038827All Organisms → cellular organisms → Bacteria → Acidobacteria813Open in IMG/M
3300026078|Ga0207702_11434658All Organisms → cellular organisms → Bacteria → Acidobacteria684Open in IMG/M
3300026095|Ga0207676_10298825All Organisms → cellular organisms → Bacteria → Acidobacteria1469Open in IMG/M
3300027869|Ga0209579_10640818All Organisms → cellular organisms → Bacteria → Acidobacteria576Open in IMG/M
3300027915|Ga0209069_10440167All Organisms → cellular organisms → Bacteria → Acidobacteria722Open in IMG/M
3300027915|Ga0209069_10512730All Organisms → cellular organisms → Bacteria → Acidobacteria677Open in IMG/M
3300028379|Ga0268266_10794227All Organisms → cellular organisms → Bacteria → Acidobacteria914Open in IMG/M
3300030047|Ga0302286_10547674All Organisms → cellular organisms → Bacteria → Acidobacteria588Open in IMG/M
3300031057|Ga0170834_104456162All Organisms → cellular organisms → Bacteria → Acidobacteria538Open in IMG/M
3300031128|Ga0170823_16973325All Organisms → cellular organisms → Bacteria → Acidobacteria537Open in IMG/M
3300031231|Ga0170824_114136010All Organisms → cellular organisms → Bacteria → Acidobacteria540Open in IMG/M
3300031241|Ga0265325_10473063All Organisms → cellular organisms → Bacteria → Acidobacteria545Open in IMG/M
3300031595|Ga0265313_10197411All Organisms → cellular organisms → Bacteria → Acidobacteria838Open in IMG/M
3300031595|Ga0265313_10268831All Organisms → cellular organisms → Bacteria → Acidobacteria691Open in IMG/M
3300031726|Ga0302321_102059521All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300031726|Ga0302321_102193000All Organisms → cellular organisms → Bacteria → Acidobacteria643Open in IMG/M
3300031823|Ga0307478_11509627All Organisms → cellular organisms → Bacteria → Acidobacteria556Open in IMG/M
3300031823|Ga0307478_11632597All Organisms → cellular organisms → Bacteria → Acidobacteria532Open in IMG/M
3300032174|Ga0307470_11097052All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300033433|Ga0326726_12239476All Organisms → cellular organisms → Bacteria → Acidobacteria531Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere13.86%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.91%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere7.92%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds5.94%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.95%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere4.95%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.96%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.97%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.97%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.97%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.97%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere2.97%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.98%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil1.98%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.98%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog1.98%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.98%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.99%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.99%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater0.99%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.99%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.99%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.99%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.99%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.99%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.99%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2007427000Uranium contaminated groundwater from Oak Ridge Integrated Field Research Center, TennesseeEnvironmentalOpen in IMG/M
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300004019Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D2EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013503Permafrost microbial communities from Nunavut, Canada - A23_5cm_12MEnvironmentalOpen in IMG/M
3300014493Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaGEnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015195Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025560Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025862Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300030047Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E2_3EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031241Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaGHost-AssociatedOpen in IMG/M
3300031595Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaGHost-AssociatedOpen in IMG/M
3300031726Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
20075949982007427000GroundwaterVVRPWDGTGDQVANLVLYNQPQEPRTATDGYLGLKRENVQVRYQPAIPARPDDETLSVAVVNYRYRFMSPWVAEAFVNPRPVLISAPMAYRQTASSR
JGIcombinedJ13530_10078672313300001213WetlandPWDGTGEQIANLILYNQPDEPRTSEDGYLGLTRANVQVRYQPPLPARPDDEGLTVAIVNFHYHFLSPWLTQTFVNPRPVMIAAPMAYRATASR*
Ga0055439_1032449213300004019Natural And Restored WetlandsQALVERVRSSVRWGVVRPWDGTGDQVANLILYSQPGEPNTTTAGYLGLTRGNVQVTYRPAAPERPDDESITVAIVDYHYYFLSPWVTSALVNPRPVLESAPMAYRTVAAN*
Ga0062389_10101299823300004092Bog Forest SoilERVRSAVRWGVVRPWDGTGEQVANLILYDQPDAPRSATGGYQGLTRENVQVRYQPPSAARPDDEVLSVAIVNYHYQFLSPWITQIFVSPRPVLITAPMAYRAAGL*
Ga0062593_10274679723300004114SoilGSGEQIANWILYDQPTEPAGASGSYLGLTRENVQVRYQPASAARPDDETLSVSIVNFHYQFLSPWITRIFINPRPVLISAPMAYKAAAL*
Ga0070683_10121707423300005329Corn RhizosphereLALLVFMSLLFAVIDCGLVLVSHQTLVERVRAAVRWGVVRPWDGTGEQVANLILYDQTKAPLASTAGYLGLTRENVQVRYQPASTGHPDDEILSVAIVNYRYRFLSPWITQTFVNPRPVLITSPMAYKAGL*
Ga0070661_10119347213300005344Corn RhizosphereGAQVANLILYDQPDEPRAARSGYLGLTRENVQVRYQPSSTGHPDDEILSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAPL*
Ga0070714_10106703223300005435Agricultural SoilAVRWGVVRPWDGSGDQIANLILYQQTTEPGSAGAGYLGLKRENVQVRYQPASPVRPDDELLSVAIVNFHYQFLSPWITQIFVNPRPVLIAAPMAYKAGAL*
Ga0070711_10060609223300005439Corn, Switchgrass And Miscanthus RhizosphereDGSGDQIANLILYQQTTEPGSAGAGYVGLKRENVQVRYQPASPVRPDDELLSVAIVNFHYQFLSPWITQIFVNPRPVLIAAPMAYKAGAL*
Ga0070681_1039337923300005458Corn RhizosphereIDCGLVLVRHQSLVERVRGAVRWGVVHPWDGRGEQIANLILYDQPTEPAGASGSYLGLTRDNVQVRYQPASAARPDDETLSVSIVNFHYQFLSPWVTRIFINPRPVLISAPMAYKAAAL*
Ga0070681_1043693223300005458Corn RhizosphereSAVRWGVVRPWDGSGDQIANLILYQQTTEPGSAGAGYLGLKRENVQVRYQPASPARPDDELLSVAIVNFHYQFLSPWITQIFVNPRPVLIAAPMAYKAGAL*
Ga0070679_10188849613300005530Corn RhizosphereVSHQTLVERVRSAVRWGVVRPWDGTGAQVANLILYDQPDEPRAARSGYLGLTRENVQVRYQPSSTGHPDDEILSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAPL*
Ga0070735_1016656923300005534Surface SoilHQSLVERVRFAVRWGVVRPWDGTGGQIANLILYDQPTEPARATSGYLGLTRENVQVTYQPASAARPDDEVLSVAIVNYHYRFLSPWITQVFVNPRPVMITSPMAYKTGGL*
Ga0070731_1091146113300005538Surface SoilFHQTLVERVRSAARWGVVHPWDGTGEQIANLILYNQPEEPRTTTDGYLGLTRDNVQVRYQPPAPSRPDDEILSVAIVNYRYHFMSPWIAGTFVNPRTVLISAPMAYRAAAQ*
Ga0068856_10115342513300005614Corn RhizosphereTLLFGVIDCGLVLVRHQSLVERVRSAVRWGVVRPWDGSGEQIANLILYGQPTEPIGATSGATGSYLGLTRENVQVRYEPASAARPDDEMLSVSIVNFHYQFLSPWITQVFVNPRPVLISAPMAYKAAAL*
Ga0068864_10031488023300005618Switchgrass RhizosphereGEQIANLILYDSPTEPAGSTGSYLGLTRDNVQVRYQPASPARPDDEMLSVSIINFHHQFLSPWITQIFINPRPVLISAPMAYKAAAL*
Ga0068858_10001906873300005842Switchgrass RhizosphereLFGVIDCGLVLVRHQSLVERVRSAVRWGVVRPWDGSGQQIANLILYDQPAEPSGANGGAAGSYLGLTRENVQVRYQPASPERPDDEMLIVSIVNFHYQFLSPWITQVFINPRPVLISAPMAYKAAAL*
Ga0068860_10135960323300005843Switchgrass RhizosphereDQPAEPAGANGSAARSYLGLTRENVQVRYQPASPERPDDEMLSVSIVNFHYQFLSPWITQVFINPRPVLISAPMAYKAAAL*
Ga0075023_10003103113300006041WatershedsAVRWGVVRPWDGTGEQVANRILYDQPTEPAGATSGYLGLTRENVQVTYQPPSAARPDDEVLSVAIVNYHYRFLSPWITQVFVNPRPVMITSPMAYKTASR*
Ga0075026_10102413813300006057WatershedsNRILYDQPTEPAGATSGYLGLTRENVQVTYQPPSAARPDDEVLSVAIVNYHYRFLSPWITQVFVNPRPVMITSPMAYKTASR*
Ga0075017_10021075113300006059WatershedsDQPTEPAGANGSAAGSYLGLTRKNVQVRYQPASPERPDDEMLSVSIVNFRYQFLSPWITEIFVNPRPVLISAPMAYKAAAL*
Ga0075015_10085388823300006102WatershedsSHQSLVERVRSAVRWGVVRPWDGTGEQVANRILYDQPTEPAGATSGYLGLTRENVQVTYQPPSAARPDDEVLSVAIVNYHYRFLSPWITQVFVNPRPVMITSPMAYKTASR*
Ga0097621_10154361013300006237Miscanthus RhizosphereVANLILYDQPDEPRAARSGYLGLTRENVQVRYQPSSIGHPDDEILSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAAGL*
Ga0075522_1003296813300006638Arctic Peat SoilVERVRAAVRWGVVRPWDGSGEQVANLILYDQTEAPRAATAGYLGLTRQNVQVRYQPSSTGHPDDELLSVAIVNYRYRFLSPWITQTFVNPRPVLITSPMAYKAPL*
Ga0105240_1010517013300009093Corn RhizosphereMANLILYDQPDEPRAARSGYLGLTRENVQVRYQPSSTGHPDDEILSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAPL*
Ga0105240_1051316723300009093Corn RhizosphereVRDTRRSERGQTLVEGALALTVFFSLLFGGIDCGLVPVRHPSLDERVRAAVRWGVVRPWDGTGEQIANLILYDRPTGSPVSGGYLGLTRENVQVRYRPASPARPDDEMLSVSIVNFHYQFLSPWITQIFINPRPVLISAPMAYKAASL*
Ga0105240_1189997413300009093Corn RhizosphereIANLILYQQTTEPGSAGAGYLGLKRENVQVRYQPASPVRPDDELLSVAIVNFHYQFLSPWITQIFVNPRPVLIAAPMAYKAGAL*
Ga0105240_1193535323300009093Corn RhizosphereEQIANLILYDQPTEPAGASGSYLGLTRENVQVRYQPASAARPDDETLSVSIVNFHYQFLSPWITRIFINPRPVLISAPMAYKAAAL*
Ga0105245_1001365873300009098Miscanthus RhizosphereLLFAVVDCGLVLVSHQTLVERVRSAVRWGVVRPWDGTGEQVANLILYDQPDSPRATTAGYLGLTRENVQVRYQPSSLGHPDDEVLSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAPL*
Ga0105245_1002300313300009098Miscanthus RhizosphereERVRSAVRWGVVRPWDGSGEQIANLILYDQPTEPSGANGGPAGSYLGLTRENVQVRYQPASPERPDDEMLIVSIVNFHYQFLSPWITQVFINPRPVLISAPMAYKAAAL*
Ga0105245_1164419223300009098Miscanthus RhizosphereALIVFFSLLFAVIDCGLVLMSHQSLVERVRSAVRWGVVRPWDGSGEQIANLILYDQPTQPPSTTKGYLGLSRENVHITYQPASAARPDDEVLSVAIVNYRYQFLSPWITQIFVNPRPVLITAPMAYRATASR*
Ga0105243_1001977863300009148Miscanthus RhizosphereMVFFSLLFGVIDCGLVLARHQSLVERVRSAVRWGVVRPWDGSGEQIANLILYDQPTEPAGARGSYLGLTRENVQVRYQPASPARPDDEMLSVSIINFHHQFLSPWITQIFINPRPVLVSAPMAYKAAAL*
Ga0105241_1003669743300009174Corn RhizosphereMVFFSLLFGVIDCGLVLARHQSLVERVRSAVRWGVVRPWDGSGEQIANLILYDQPTEPAGARGSYLGLTRENVQVRYQPASPARPDDEMLSVSIINFHHQFLSPWITQIFINLRPGLGAAPMAYKAAAL*
Ga0105241_1108167823300009174Corn RhizosphereAVRWGVVRPWDGSGEQIANLILYDQPTEPSGATGSYLGLTRENVQVRYQPASPSRPDDEMLTVSIVNFQHQFLSPWITQIFMNPRPVLISAPMAYKAAAL*
Ga0105241_1147932313300009174Corn RhizosphereVRSAVRWGVVRHWDGTGEQVANLILYDQPDSPRATTAGYLGLTRENVQVRYQPSSLGHPDDEVLSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAPL*
Ga0105248_1239469813300009177Switchgrass RhizosphereQIANLILYDRPTGSPVSGGYLGLTRENVQVRYRPASPARPDDEMLSVSIVNFHYQFLSPWITQIFINPRPVLISAPMAYKAASL*
Ga0105237_1114468423300009545Corn RhizosphereVLVSHQTLVERVRSAVRWGVVRPWDGTGEQVANLILYDQPDSPRATTAGYLGLTRENVQVRYQPSSLGHPDDEVLSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAPL*
Ga0105238_1043916023300009551Corn RhizosphereVRSAVRWGVVRPWDGSGEQIANLILYGQPTEPIGATSGATGSYLGLTRENVQVRYEPASAARPDDEMLSVSIVNFHYQFLSPWITQVFVNPRPVLISAPMAYKAAAL*
Ga0134128_1014201943300010373Terrestrial SoilGVIDCGLVLVRHQSLVERVRGAVRWGVVHPWDGRGEQIANLILYDQPTEPAGASGSYLGLTRDNVQVRYQPASAARPDDETLSVSIVNFHYQFLSPWVTRIFINPRPVLISAPMAYKAAAL*
Ga0105239_1310982623300010375Corn RhizosphereSAVRWGVVRPWDGTGEQVANLILYDQPDSPRATTAGYLGLTRENVQVRYQPSSLGHPDDEVLSAAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAPL*
Ga0137393_1142778023300011271Vadose Zone SoilVRPWDGTGEQIANLVLYGQPDEPRTSTGGFLGITRANVQVRYQPSLPARPDDEGLSVAIVNYQYHFLSPWLPQTLVNPRPVMVAAPMAYRATALQ*
Ga0120139_112479723300012019PermafrostVHPWDGTGEQIANLILYNQPDEPRTTTDGYLSLTRANVQVRYQPPVPSRPDDEILSVAIVNYQYHFMSPWITGTFVNPRTVLISAPMAYRAATR*
Ga0137383_1134959023300012199Vadose Zone SoilEQIANLILYGQPDEPSTSTGGFLGLTRANVQVRYQPSLPARPDDEGLSVAIVNYQYHFLSPWLPQTFVNPRPVMISAPMAYRAAALP*
Ga0137363_1155485313300012202Vadose Zone SoilRVRSAVRWGVVRPWDGTGEQIANLILYGQPDEPRTSTGGFLGLARANVQVRYQPSLPARPDDEGLSVAIVNYQYHFLSPWLPQTFVNPRPVMVAAPMAYRATALQ*
Ga0137362_1141506023300012205Vadose Zone SoilGEQIANLILYGQPDEPSTSTGGFLGLTRANVQVRYQPSLPARPDDEGLSVAIVNYQYHFLSPWLPQTFVNPRPVMISAPMAYRAAALP*
Ga0137378_1059325613300012210Vadose Zone SoilSLMERVRSAVRWGVVRPWDGTGEQIANLILYGQSDEPSTSTGGFLGLTRANVQVRYQPSLPARPDDEGLSVAIVNYQYHFLSPWLPQTFVNPRPVMISAPMAYRAAALP*
Ga0137377_1153542213300012211Vadose Zone SoilLIEGTFVLLVFFALLFGAIDSGQVLIAHQSLMERVRSAVRWGVVRPWDGTGEQIANLILYGQPDEPSTSTGGFLGLTRANVQVRYQPSLPARPDDEGLSVAIVNYQYHFLSPWLPQTFVNPRPVMISAPMAYRAAALP*
Ga0137384_1018127723300012357Vadose Zone SoilLIEGTFVLLVFFALLFGAIDSGQVLIAHQSLMERVRSAVRWGVVRPWDGTGEQIANLILYGQPDEPSTSTGGFLGLTRTNVQVRYQPSLPARPDDEGLSVAIVNYQYHFLSPWLPQTFVNPRPVMISAPMAYRAAALP*
Ga0137359_1110531823300012923Vadose Zone SoilVVRPWDGTGEQVANLILYDQPTEPAGATSGYLGLTRENVQVTYQPSSAARPDDEVLSVAIVNYHYRFLSPWILKTFVNPRPVLITSPMAYKTAGLSRTSP*
Ga0153915_1289558213300012931Freshwater WetlandsTGEQVANLILYDQPTEPRAATAGYLGLTRENVQVRYQPSSAARPDDEVLSVAIVNYRYRFLSPWITQTFVNPRPVLITSPMAYKAPL*
Ga0157370_1170164923300013104Corn RhizosphereDCGLVLVSHQTLVERVRAAVRWGVVRPWDGTGGQVANLILYDQTEAPRAPAAGYLGLTRENVQVRYQPASTGHPDDEILSVAIVNYRYRFLSPWITQTFVNPRPVLITSPMAYKAGL*
Ga0157374_1152788923300013296Miscanthus RhizosphereERVRSAVRWGVVRPWDGTGEQVANLILYDQPDSPRATTAGYLGLTRENVQVRYQPSSLGHPDDEVLSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAPL*
Ga0157374_1196373223300013296Miscanthus RhizosphereVERVRSAVRWGVVRPWDGSGQQIANLILYDQPTEPAGAAGSYLGLTRENVQVRYQPASPARPDDEMLSVSIVNFHHQFLSPWITQVFINPRPVLISAPMAYKAAAL*
Ga0157378_1033913233300013297Miscanthus RhizosphereMVFFSLLFGVIDCGLVLARHQSLVERVRSAVRWGVVRPWDGSGEQIANLILYDQPTEPAGARGSYLGLTRENVQVRYQPASPARPDDEMLSVSISNFHHQFLSPWITQIFINPRPVLVSAPMAYKAAAL*
Ga0163162_1107859413300013306Switchgrass RhizosphereRVLVSHQTLVERVRSAVRWGVVRPWDGTGAQVANLILYDQPDEPRATITGYLGLTRENVQVRYQPSSTGHPDDEILSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAPL*
Ga0163162_1137412723300013306Switchgrass RhizosphereGSHQTLVERVRSAVRWGVVRPWDGTGEQVANLILYDQPDSPRATTAGYLGLTRENVQVRYQPSSLGHPDDEVLSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAPL*
Ga0163162_1344108313300013306Switchgrass RhizosphereLALLVFFSLLFAVVDCGRVLVSHQTLVERVRSAVRWGVVRPWDGTGAQVANLILYDQPDEPRAARSGYLGLTRENVQVRYQPSSIGHPDDEILSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAAGL*
Ga0120127_1011237213300013503PermafrostWGVVRPWDGTGEQIANLILYDQPTEPAGASGSYLGLTRENVQVRYQPASPARPDDELLSVSIVNFHYQFLSPWITQVFVNPRPVLISAPMAFKAAGL*
Ga0182016_1002880713300014493BogRWGMVRPWDGTGDQIASLILYNRSEEPRMATDGYLGLTRENVRVTYQPASTARPDDETISVAIMNYRYHFISPWIGEAFVNPRPVMITAPMAYRVAVR*
Ga0182030_1040094313300014838BogVLALLVFFAMLFGVIDCGLVLVRHQSLVERVRSAVRWGVVRPWDGSGEQIANLILYDQPTGSASAVTGGYLGLTRENVQVRYQPASAARPDDEMLSVSIVNFHYQFLSPWLTRVFINPRPVLISAPMAYKAAAL*
Ga0157376_1313703723300014969Miscanthus RhizosphereNLILYDQPTEPSGANGGPAGSYLGLTRENVQVRYQPASPERPDDEMLIVSIVNFHYQFLSPWITQVFINPRPVLISAPMAYKAAAL*
Ga0167658_101377723300015195Glacier Forefield SoilLALLVFFSLLFAVIDCGLVLVSHQWLVERVRSAVRWGVVRPWDGTGEQVANLILYDQPGEPASTTHGYLGLTRENVQVSYQPPSAARPDDEVLSVAIVNYRYRFLSPWLTQTFVNPRPVLIASPMAYKGAGL*
Ga0187770_1057220723300018090Tropical PeatlandVAHQALVERVRAAVRWGVVRPWDGTGDQVSNLVLYNQPEEPRAATDGYLGLTHENVQVRYQPPIPARPDDEMLTVAVVNYHYKFMSPWIGEWINPRPVLISAPMAYRVAAER
Ga0210403_1102419023300020580SoilVRPWDGTGGQIANLILYDQPVEPRGANAGYLGLTRDNVLVRYQPSSASRPDDEILSVSIVNFHYQFLSPWITQVFINPRPVLISAPMAYKAAAL
Ga0179596_1068545623300021086Vadose Zone SoilDGTGEQIANLILYGQPDEPRTSTGGFLGLARANVQVRYQPSLPARPDDEGLSVAIVNYQYHFRSPWLPQTFVNPRPVMVAAPMAYRATALQ
Ga0210409_1109343413300021559SoilWGVVHPWDGGDGVMNLILYNQPDAPRPATAGFLGLTRDNVQVRRRRATPERPDDEALSVAIVNYEYHFFSPWLSRPFVNPRPVFMTAPVRSD
Ga0210108_104065813300025560Natural And Restored WetlandsWDGTGDQVANLILYSQPGEPNTTTAGYLGLTRGNVQVTYRPAAPERPDDESITVAIVDYHYYFLSPWVTSALVNPRPVLESAPMAYRTVAAN
Ga0209483_104275813300025862Arctic Peat SoilLKDYGSTQEELTTAPEAVIPCWDGSGEQIANLILYDQPTEPVGASSRTASGATGGYLGLTRDNVQVRYQPASPARPDDEMLSVSIVNFHYQFLSPWITHIFINPRPVLISAPMAYKAATL
Ga0207707_1112621613300025912Corn RhizosphereSAVRLGVVRPWDGTGAQVANLILYDQPDEPRAARSGYLGLTRENVQVRYQPSSIGHPDDEILSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAAGL
Ga0207695_1092754223300025913Corn RhizosphereVVRPWDGTGEQIANLILYDRPTGSPVSGGYLGLTRENVQVRYRPASPARPDDEMLSVSIVNFHYQFLSPWITQIFINPRPVLISAPMAYKAASL
Ga0207671_1157245413300025914Corn RhizosphereSHQTLVERVRAAVRWGVVRPWDGTGEQVANLILYDQTKSPSAATAGYLGLTRENVQVRYQPASTGHPDDEILSVAIVNYRYRFLSPWITQTFVNPRPVLITSPMAYKAGL
Ga0207694_1015021913300025924Corn RhizosphereVRWGVVRPWDGTGAQVANLILYDQPDEPRAARSGYLGLTRENVQVRYQPSSIGHPDDEILSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAAGL
Ga0207694_1041653523300025924Corn RhizosphereSAVRWGVVRPWDGSGEQIANLILYGQPTEPIGATSGATGSYLGLTRENVQVRYEPASAARPDDEMLSVSIVNFHYQFLSPWITQVFVNPRPVLISAPMAYKAAAL
Ga0207687_1017661013300025927Miscanthus RhizosphereGSGQQIANLILYDQPTEPSGANGGPAGSYLGLTRENVQVRYQPASPERPDDEMLIVSIVNFHYQFLSPWITQVFINPRPVLISAPMAYKAAAL
Ga0207687_1117073323300025927Miscanthus RhizosphereLVSHQTLVERVRSAVRWGVVRPWDGTGAQVANLILYDQPDEPRAARSGYLGLTRENVQVRYQPSSTGHPDDEILSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAPL
Ga0207664_1050975513300025929Agricultural SoilGDQIANLILYQQTTEPGSAGAGYLGLKRENVQVRYQPASPVRPDDELLSVAIVNFHYQFLSPWITQIFVNPRPVLIAAPMAYKAGAL
Ga0207686_1009810833300025934Miscanthus RhizosphereAVRWGVVRPWDGTGAQVANLILYDQPDEPRAARSGYLGLTRENVQVRYQPSSIGHPDDEILSVAIVNYHYRFLSPWITQTFVNPRPVLITSPMAYKAAGL
Ga0207686_1034272213300025934Miscanthus RhizosphereLLFAVVDCGLVLVSHQTLVERVRSAVRWGVVRPWDGTGAQVANLILYDQPDEPRAARSGYLGLTRENVQVRYQPSSTGHPDDEILSVTIVNYHYRFLSPWITQTFVNPRPVLITSPMAYRARF
Ga0207711_1113648213300025941Switchgrass RhizosphereSLLFGVIDCGLVLVRHQSLVERVRSAVRWGVVRPWDGTGEQIANLILYDRPTGSPVSGGYLGLTRENVQVRYRPASPARPDDEMLSVSIVNFHYQFLSPWITQIFINPRPVLISAPMAYKAASL
Ga0207667_1191384823300025949Corn RhizosphereWGVVHPWDGSGEQIANLILYGQPTEPIGATSGATGSYLGLTRENVQVRYEPASAARPDDEMLSVSIVNFHYQFLSPWITQVFVNPRPVLISAPMAYKAAAL
Ga0207639_1044899523300026041Corn RhizosphereLVSHQTLVERVRAAVRWGVVRPWDGTGEQVANLILYDQTKSPSAATAGYLGLTRENVQVRYQPASTGHPDDEILSVAIVNYRYRFLSPWITQTFVNPRPVLITSPMAYKAGL
Ga0207702_1103882723300026078Corn RhizosphereVIDCGLVLVRHQSLVERVRSAVRWGVVHPWDGSGEQIANLILYGQPTEPIGATSGATGSYLGLTRENVQVRYEPASAARPDDEMLSVSIVNFHYQFLSPWITQVFVNPRPVLISAPMAYKAAAL
Ga0207702_1143465813300026078Corn RhizosphereNGEQIANLILYEQTKSSSASTGYLGLTRENVQVRYQPASPSRPDDEVLSVAIVNFHYQFLSPWITEIFVNPRPVLITAPMAYKTANL
Ga0207676_1029882523300026095Switchgrass RhizosphereGEQIANLILYDSPTEPAGSTGSYLGLTRDNVQVRYQPASPARPDDEMLSVSIINFHHQFLSPWITQIFINPRPVLISAPMAYKAAAL
Ga0209579_1064081813300027869Surface SoilFHQTLVERVRSAARWGVVHPWDGTGEQIANLILYNQPEEPRTTTDGYLGLTRDNVQVRYQPPAPSRPDDEILSVAIVNYRYHFMSPWIAGTFVNPRTVLISAPMAYRAAAQ
Ga0209069_1044016713300027915WatershedsLVVFLSLLFAVIDCGLVLVAHQSLVERTRAAVRWGVVHPWDGTGEQIANWILYDQPGEPVSSREGYLGLTRANVQVIHQPPVTEHPDDELIRVAIVNYHYQFLSPFLGLTKGLVSSRPVTISAPMSYVASKVPHGTTN
Ga0209069_1051273023300027915WatershedsRVRSAVRWGVVRPWDGTGEQVANRILYDQPTEPAGATSGYLGLTRENVQVTYQPPSAARPDDEVLSVAIVNYHYRFLSPWITQVFVNPRPVMITSPMAYKTASR
Ga0268266_1079422713300028379Switchgrass RhizospherePWDGTGAQVANLILYDQPDEPRAARSGYLGLTRENVQVRYQPSSTGHPDDEILSVTIVNYHYRFLSPWITQTFVNPRPVLITSPMAYRARF
Ga0302286_1054767423300030047FenVRSAVRWGAVRPWDGTGDQIASLVLYNQTAEPRTVTEGYLGLKRDNVRVTYQAPSQARPDDETVSVAIVNYKYHFISPWIGDTFVNPRPVMISAPMALRSAAR
Ga0170834_10445616223300031057Forest SoilWGVVRPWDGTGEQVANLILYDQPTEPAGATSGYLGLTRENVQVTYQPSSAARPDDEVLSVAIVNYHYRFLSPWILKTFVNPRPVLITSPMAYKTAGLSRTSR
Ga0170823_1697332523300031128Forest SoilGVVRPWDGTGEQVANLILYDQPTEPAGATSGYLGLTRENVQVTYQPSSAARPDDEVLSVAIVNYHYRFLSPWILKTFVNPRPVLITSPMAYKTAGLSRTSR
Ga0170824_11413601023300031231Forest SoilWGVVRPWDGTGEQVANLILYDQPTEPAGATSGYLGLTRENVQVTYQPSSAARPDDEVLSVAIVNYRYRFLSPWITQTFVNPRPVLITSPMAYKAPL
Ga0265325_1047306323300031241RhizosphereVRPWDGTGEQIANLILYDQPSEPRTSRGGYFGLTRADVQVRYQPRLPARPDDEMLSVAVVNYHYRFLSPWLPEGFVNPRPVMISAPMAYRDSASR
Ga0265313_1019741123300031595RhizosphereEQIANLILYGQPIEAPAATSSVTTGYLGLTRENVQVRYQPASPARPDDEMLSVSIVNFHYQFLSPWITQVFINPRPVFISAPMAYKAAAL
Ga0265313_1026883123300031595RhizosphereHQTLVERVRAAVRWGVVRPWDGTGEQVANLILYDQTEAPRATTGGYLGLARENVQVHYQPSSTGHPDDEILSVAIVNYRYRFLSPWITQTFVNPRPVLITSPMAYKAPL
Ga0302321_10205952123300031726FenAVRWGAVRPWDGTGDQIASLVLYNQTAEPRTVTEGYLGLKRDNVRVTYQAPSQARPDDETVSVAIVNYKYHFISPWIGDTFVNPRPVMISAPMALRSAAR
Ga0302321_10219300013300031726FenLVLVRHQSLVERVRSAVRWGVVRPWDGSGAQIANLILYDRPTGPASAASDATTGATSGYLGLTRENVLVRYQPASPARPDDEMLSVSIVDFHYQFLSPGSRGSL
Ga0307478_1150962723300031823Hardwood Forest SoilEGALALLVFCSLLFGVIDCGLVLVRHQSLVERVRSAVRWGVVRPWDGSGEQIANLILYDQPTEPAGATGSYLGLTRDNVQVRYQPASPERPDDEMLSVSIVNFHYQFLSPWITQIFINPRPVLISAPMAYKAAAL
Ga0307478_1163259723300031823Hardwood Forest SoilEQIANLILYDQPTEPAGATGSYLGLTRDNVQVRYQPASPARPDDEMLSVSIVNFHYQFLSPWITQIFVNPRPVLISAPMAYKAAAL
Ga0307470_1109705213300032174Hardwood Forest SoilDGSGEQIANLILYDQPTEPAGATGSYLGLTRENVQVRYQPASPARPDDEMLSVSIVNFHYQFLSPWITQIFINPRPVLISAPMAYKAAAL
Ga0326726_1223947623300033433Peat SoilRVRSAVRWGVVRPWDGTGEQIANLILYDQPDQPRSARTGYLGLSRANVQVRYQPSLAARPDDEALSVTIVNYHYRFLSPWFPETFVNPRPVMMAAPMAYRSSTGL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.