Basic Information | |
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Family ID | F103484 |
Family Type | Metagenome |
Number of Sequences | 101 |
Average Sequence Length | 107 residues |
Representative Sequence | MNLVPQIAAMALVSLALAGLSQTASAEGISPGNGGSIILPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW |
Number of Associated Samples | 78 |
Number of Associated Scaffolds | 101 |
Quality Assessment | |
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Transcriptomic Evidence | No |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 58.42 % |
% of genes near scaffold ends (potentially truncated) | 35.64 % |
% of genes from short scaffolds (< 2000 bps) | 83.17 % |
Associated GOLD sequencing projects | 63 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.26 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (58.416 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (8.911 % of family members) |
Environment Ontology (ENVO) | Unclassified (74.257 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Host-associated → Plant → Plant rhizosphere (73.267 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Fibrous | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 18.66% β-sheet: 21.64% Coil/Unstructured: 59.70% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.26 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 101 Family Scaffolds |
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PF07681 | DoxX | 11.88 |
PF13519 | VWA_2 | 3.96 |
PF00092 | VWA | 2.97 |
PF04023 | FeoA | 2.97 |
PF13545 | HTH_Crp_2 | 1.98 |
PF13185 | GAF_2 | 1.98 |
PF03841 | SelA | 0.99 |
PF07944 | Glyco_hydro_127 | 0.99 |
PF02615 | Ldh_2 | 0.99 |
PF04333 | MlaA | 0.99 |
PF07568 | HisKA_2 | 0.99 |
PF00293 | NUDIX | 0.99 |
PF01734 | Patatin | 0.99 |
PF02517 | Rce1-like | 0.99 |
PF07310 | PAS_5 | 0.99 |
PF01464 | SLT | 0.99 |
PF02602 | HEM4 | 0.99 |
PF12385 | Peptidase_C70 | 0.99 |
COG ID | Name | Functional Category | % Frequency in 101 Family Scaffolds |
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COG2259 | Uncharacterized membrane protein YphA, DoxX/SURF4 family | Function unknown [S] | 11.88 |
COG4270 | Uncharacterized membrane protein | Function unknown [S] | 11.88 |
COG1918 | Fe2+ transport protein FeoA | Inorganic ion transport and metabolism [P] | 2.97 |
COG1266 | Membrane protease YdiL, CAAX protease family | Posttranslational modification, protein turnover, chaperones [O] | 0.99 |
COG1587 | Uroporphyrinogen-III synthase | Coenzyme transport and metabolism [H] | 0.99 |
COG1752 | Predicted acylesterase/phospholipase RssA, containd patatin domain | General function prediction only [R] | 0.99 |
COG1921 | Seryl-tRNA(Sec) selenium transferase | Translation, ribosomal structure and biogenesis [J] | 0.99 |
COG2055 | Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family | Energy production and conversion [C] | 0.99 |
COG2853 | Lipoprotein subunit MlaA of the ABC-type intermembrane phospholipid transporter Mla | Cell wall/membrane/envelope biogenesis [M] | 0.99 |
COG3533 | Beta-L-arabinofuranosidase, GH127 family | Carbohydrate transport and metabolism [G] | 0.99 |
COG3621 | Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR | General function prediction only [R] | 0.99 |
COG3920 | Two-component sensor histidine kinase, HisKA and HATPase domains | Signal transduction mechanisms [T] | 0.99 |
COG4449 | Predicted protease, Abi (CAAX) family | General function prediction only [R] | 0.99 |
COG4667 | Predicted phospholipase, patatin/cPLA2 family | Lipid transport and metabolism [I] | 0.99 |
COG5388 | Uncharacterized conserved protein | Function unknown [S] | 0.99 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 58.42 % |
Unclassified | root | N/A | 41.58 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000956|JGI10216J12902_112448070 | All Organisms → cellular organisms → Bacteria | 716 | Open in IMG/M |
3300005327|Ga0070658_10763449 | Not Available | 840 | Open in IMG/M |
3300005334|Ga0068869_100162598 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1739 | Open in IMG/M |
3300005334|Ga0068869_100468361 | Not Available | 1047 | Open in IMG/M |
3300005335|Ga0070666_10635647 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 780 | Open in IMG/M |
3300005337|Ga0070682_100771841 | Not Available | 778 | Open in IMG/M |
3300005338|Ga0068868_100947112 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 785 | Open in IMG/M |
3300005356|Ga0070674_102127260 | Not Available | 512 | Open in IMG/M |
3300005367|Ga0070667_100150083 | All Organisms → cellular organisms → Bacteria | 2047 | Open in IMG/M |
3300005367|Ga0070667_101411017 | Not Available | 653 | Open in IMG/M |
3300005455|Ga0070663_100982598 | Not Available | 733 | Open in IMG/M |
3300005456|Ga0070678_102118126 | Not Available | 533 | Open in IMG/M |
3300005511|Ga0077121_10303186 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium | 1179 | Open in IMG/M |
3300005548|Ga0070665_100008407 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 10440 | Open in IMG/M |
3300005548|Ga0070665_100125752 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2566 | Open in IMG/M |
3300005557|Ga0066704_10268373 | Not Available | 1158 | Open in IMG/M |
3300005576|Ga0066708_10533474 | Not Available | 756 | Open in IMG/M |
3300005842|Ga0068858_100040446 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae | 4323 | Open in IMG/M |
3300006046|Ga0066652_101081376 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 760 | Open in IMG/M |
3300006237|Ga0097621_100000046 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 64086 | Open in IMG/M |
3300006237|Ga0097621_100460992 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1146 | Open in IMG/M |
3300006237|Ga0097621_100807310 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 869 | Open in IMG/M |
3300006237|Ga0097621_101006526 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis | 780 | Open in IMG/M |
3300006237|Ga0097621_102364651 | Not Available | 508 | Open in IMG/M |
3300006358|Ga0068871_100366089 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1278 | Open in IMG/M |
3300009093|Ga0105240_10386161 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1580 | Open in IMG/M |
3300009098|Ga0105245_10475930 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1261 | Open in IMG/M |
3300009098|Ga0105245_11504656 | Not Available | 724 | Open in IMG/M |
3300009137|Ga0066709_100746373 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1413 | Open in IMG/M |
3300009148|Ga0105243_12755258 | Not Available | 532 | Open in IMG/M |
3300009148|Ga0105243_12794027 | Not Available | 529 | Open in IMG/M |
3300009174|Ga0105241_12090861 | Not Available | 559 | Open in IMG/M |
3300009176|Ga0105242_11982187 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 624 | Open in IMG/M |
3300009176|Ga0105242_13055863 | Not Available | 518 | Open in IMG/M |
3300009177|Ga0105248_12450713 | Not Available | 594 | Open in IMG/M |
3300009551|Ga0105238_12843707 | Not Available | 520 | Open in IMG/M |
3300009553|Ga0105249_12749683 | Not Available | 564 | Open in IMG/M |
3300010375|Ga0105239_10689297 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1168 | Open in IMG/M |
3300011119|Ga0105246_10366106 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1186 | Open in IMG/M |
3300011119|Ga0105246_11162639 | Not Available | 708 | Open in IMG/M |
3300012359|Ga0137385_10112082 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2412 | Open in IMG/M |
3300012469|Ga0150984_109401424 | Not Available | 551 | Open in IMG/M |
3300012469|Ga0150984_118543762 | Not Available | 610 | Open in IMG/M |
3300012683|Ga0137398_11198462 | Not Available | 519 | Open in IMG/M |
3300012930|Ga0137407_10178083 | All Organisms → cellular organisms → Bacteria | 1896 | Open in IMG/M |
3300013296|Ga0157374_12576292 | Not Available | 536 | Open in IMG/M |
3300013296|Ga0157374_12894804 | Not Available | 507 | Open in IMG/M |
3300013297|Ga0157378_10639441 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1078 | Open in IMG/M |
3300013306|Ga0163162_10339563 | All Organisms → cellular organisms → Bacteria | 1634 | Open in IMG/M |
3300013306|Ga0163162_10640138 | All Organisms → cellular organisms → Bacteria | 1187 | Open in IMG/M |
3300013306|Ga0163162_13435584 | Not Available | 505 | Open in IMG/M |
3300013308|Ga0157375_12849259 | Not Available | 578 | Open in IMG/M |
3300014325|Ga0163163_10394215 | All Organisms → cellular organisms → Bacteria | 1442 | Open in IMG/M |
3300014969|Ga0157376_10561805 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Asticcacaulis | 1131 | Open in IMG/M |
3300014969|Ga0157376_10932132 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 888 | Open in IMG/M |
3300015189|Ga0167667_1001089 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae | 9622 | Open in IMG/M |
3300015242|Ga0137412_10930536 | Not Available | 628 | Open in IMG/M |
3300018476|Ga0190274_10820692 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 989 | Open in IMG/M |
3300020027|Ga0193752_1050498 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1814 | Open in IMG/M |
3300020027|Ga0193752_1070335 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae | 1479 | Open in IMG/M |
3300020034|Ga0193753_10005045 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 9243 | Open in IMG/M |
3300021088|Ga0210404_10055630 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1878 | Open in IMG/M |
3300021170|Ga0210400_10122299 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2078 | Open in IMG/M |
3300021178|Ga0210408_10429642 | Not Available | 1052 | Open in IMG/M |
3300021180|Ga0210396_11771087 | Not Available | 500 | Open in IMG/M |
3300021407|Ga0210383_11170917 | Not Available | 647 | Open in IMG/M |
3300021420|Ga0210394_11481139 | Not Available | 575 | Open in IMG/M |
3300025903|Ga0207680_10033049 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 2947 | Open in IMG/M |
3300025903|Ga0207680_10343348 | All Organisms → cellular organisms → Bacteria | 1048 | Open in IMG/M |
3300025907|Ga0207645_10352163 | Not Available | 986 | Open in IMG/M |
3300025911|Ga0207654_10174751 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1397 | Open in IMG/M |
3300025911|Ga0207654_10626217 | Not Available | 769 | Open in IMG/M |
3300025913|Ga0207695_10248653 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1678 | Open in IMG/M |
3300025919|Ga0207657_10085659 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 2639 | Open in IMG/M |
3300025924|Ga0207694_11052566 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 689 | Open in IMG/M |
3300025935|Ga0207709_11719067 | Not Available | 522 | Open in IMG/M |
3300025937|Ga0207669_11095594 | Not Available | 672 | Open in IMG/M |
3300025937|Ga0207669_11489061 | Not Available | 577 | Open in IMG/M |
3300025941|Ga0207711_10063311 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 3192 | Open in IMG/M |
3300025941|Ga0207711_10306290 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 1466 | Open in IMG/M |
3300025942|Ga0207689_10180665 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas | 1740 | Open in IMG/M |
3300025942|Ga0207689_11300053 | Not Available | 611 | Open in IMG/M |
3300025960|Ga0207651_12048655 | Not Available | 514 | Open in IMG/M |
3300026023|Ga0207677_10919762 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 789 | Open in IMG/M |
3300026035|Ga0207703_10021903 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae | 5004 | Open in IMG/M |
3300026041|Ga0207639_10178860 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 1803 | Open in IMG/M |
3300026067|Ga0207678_10412128 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales | 1171 | Open in IMG/M |
3300026095|Ga0207676_12468070 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia | 517 | Open in IMG/M |
3300028379|Ga0268266_10009040 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii | 8808 | Open in IMG/M |
3300029990|Ga0311336_12106044 | Not Available | 501 | Open in IMG/M |
3300031231|Ga0170824_101354313 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 596 | Open in IMG/M |
3300031231|Ga0170824_111388301 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 776 | Open in IMG/M |
3300031446|Ga0170820_17207877 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 630 | Open in IMG/M |
3300031456|Ga0307513_10323217 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 1300 | Open in IMG/M |
3300031474|Ga0170818_103056345 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium | 679 | Open in IMG/M |
3300031730|Ga0307516_10024510 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 6161 | Open in IMG/M |
3300031753|Ga0307477_11167423 | Not Available | 501 | Open in IMG/M |
3300031902|Ga0302322_102687323 | Not Available | 614 | Open in IMG/M |
3300031962|Ga0307479_10186083 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales | 2044 | Open in IMG/M |
3300031995|Ga0307409_102882776 | Not Available | 508 | Open in IMG/M |
3300032174|Ga0307470_10026583 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 2695 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 8.91% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 8.91% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 7.92% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 5.94% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 5.94% |
Miscanthus Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere | 5.94% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 5.94% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 3.96% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 3.96% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 3.96% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 3.96% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 3.96% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 3.96% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 3.96% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.97% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.97% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 2.97% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 1.98% |
Ectomycorrhiza | Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza | 1.98% |
Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere | 1.98% |
Glacier Forefield Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil | 0.99% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 0.99% |
Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.99% |
Corn Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere | 0.99% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere | 0.99% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 0.99% |
Switchgrass Rhizosphere | Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere | 0.99% |
Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere | 0.99% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000956 | Soil microbial communities from Great Prairies - Kansas, Native Prairie soil | Environmental | Open in IMG/M |
3300005327 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG | Host-Associated | Open in IMG/M |
3300005334 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 | Host-Associated | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005337 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG | Environmental | Open in IMG/M |
3300005338 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 | Host-Associated | Open in IMG/M |
3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
3300005367 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG | Host-Associated | Open in IMG/M |
3300005455 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG | Host-Associated | Open in IMG/M |
3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
3300005511 | Combined assembly of arab plate scrape MF_Col (Combined Assembly) | Host-Associated | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005557 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 | Environmental | Open in IMG/M |
3300005576 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 | Environmental | Open in IMG/M |
3300005842 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 | Host-Associated | Open in IMG/M |
3300006046 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101 | Environmental | Open in IMG/M |
3300006237 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) | Host-Associated | Open in IMG/M |
3300006358 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 | Host-Associated | Open in IMG/M |
3300009093 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG | Host-Associated | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009137 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158 | Environmental | Open in IMG/M |
3300009148 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG | Host-Associated | Open in IMG/M |
3300009174 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG | Host-Associated | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009551 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG | Host-Associated | Open in IMG/M |
3300009553 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG | Host-Associated | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300011119 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG | Host-Associated | Open in IMG/M |
3300012359 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG | Environmental | Open in IMG/M |
3300012469 | Combined assembly of Soil carbon rhizosphere | Host-Associated | Open in IMG/M |
3300012683 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG | Environmental | Open in IMG/M |
3300012930 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300013296 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG | Host-Associated | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300013306 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG | Host-Associated | Open in IMG/M |
3300013308 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG | Host-Associated | Open in IMG/M |
3300014325 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG | Host-Associated | Open in IMG/M |
3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
3300015189 | Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine) | Environmental | Open in IMG/M |
3300015242 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300018476 | Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T | Environmental | Open in IMG/M |
3300020027 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1 | Environmental | Open in IMG/M |
3300020034 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2 | Environmental | Open in IMG/M |
3300021088 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M | Environmental | Open in IMG/M |
3300021170 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M | Environmental | Open in IMG/M |
3300021178 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M | Environmental | Open in IMG/M |
3300021180 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O | Environmental | Open in IMG/M |
3300021407 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O | Environmental | Open in IMG/M |
3300021420 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M | Environmental | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025907 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025913 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025919 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025924 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025935 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025941 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025942 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026035 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026041 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026095 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300029990 | I_Fen_N2 coassembly | Environmental | Open in IMG/M |
3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031446 | Fir Summer Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031456 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM | Host-Associated | Open in IMG/M |
3300031474 | Fir Coassembly Site 11 - Champenoux / Amance forest | Environmental | Open in IMG/M |
3300031730 | Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM | Host-Associated | Open in IMG/M |
3300031753 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515 | Environmental | Open in IMG/M |
3300031902 | Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2 | Environmental | Open in IMG/M |
3300031962 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515 | Environmental | Open in IMG/M |
3300031995 | Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 | Host-Associated | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
JGI10216J12902_1124480701 | 3300000956 | Soil | MVLVPRIAKVALVSLALAGLATPVSAGGLMPGNGGTITLPTVLPPSVQASLLPSTGSSVSSGFDVLGQKFGVQNGALDFFSVRPTEGGDFKPLFRGGLGQGGLKLQLKW* |
Ga0070658_107634492 | 3300005327 | Corn Rhizosphere | MGGAGMNVVPQIVRASLVSLALAGLAGTALAGGLSPGNGGTITLPTVLPPSVQNTLVLPATTAMSSFDVLGQKFGVENGRLDFFSVRPGDSGDFKPMLRGGFGEGGLKLQLKW* |
Ga0068869_1001625983 | 3300005334 | Miscanthus Rhizosphere | MGRGMNLVPQIAAMALVSLALAGLSQTASAEGISPGNGGSMILPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPTDGGAFKPLLRGGVGGGGLQLQLKW* |
Ga0068869_1004683611 | 3300005334 | Miscanthus Rhizosphere | VERGMKLVPQITKVALVGLAMAGLAAPVFAGGIMPGNGGSITLPTVLPPSVQDSLLLPTTGGSSGFDMLGQKFGVQNGRLDFFSVRPSEGGDFKPLFRGGVGEGGLKLQLKW* |
Ga0070666_106356472 | 3300005335 | Switchgrass Rhizosphere | MNVVPQIVRASLVSLALAGLAGTALAGGLSPGNGGTITLPTVLPPSVQNTLVLPATTATSSFDVLGQKFGVENGRLDFFSVRPGDSGDFKPMLRGGF |
Ga0070682_1007718411 | 3300005337 | Corn Rhizosphere | MGAGMNSRKTGLVIVSLALAGLSAPAFAGGLSPGNGGTIVLPTVLPPSVQDSMHGLVPTNGSSSFDVLGQKFGVQDGRLDFFSVRPSDGGDFKPLFRGGVGEGGLKLQLKW* |
Ga0068868_1009471122 | 3300005338 | Miscanthus Rhizosphere | MNLVPQIAAMAFVSLALAGLSQTASAEGISPGNGGSIVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW* |
Ga0070674_1021272601 | 3300005356 | Miscanthus Rhizosphere | MKLVPQLAKVALVGLAMAGLAAPAFAAGLMPGNGGTIKLPTALPPSVQESLASSLLPADGVSSGFDVLGQKFGVQNGRMDFFSVRPSEGGEFKPLFRGGFGEGGLKLQLKW |
Ga0070667_1001500831 | 3300005367 | Switchgrass Rhizosphere | MNLVPQIAAMAFVSLALAGLSQTASAEGISPGNGGSIVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGV |
Ga0070667_1014110171 | 3300005367 | Switchgrass Rhizosphere | MKLVPQVAKVALVGLAMAGLAAPAFAGGMMPGNGGSITLPTVLPPSVQESLSLLPAPGGSSGFDMLGQKFGVQNGRLDFFSVRPSEGGDFKPLFRGGVGEGGLKLQLKW* |
Ga0070663_1009825981 | 3300005455 | Corn Rhizosphere | MNVVPQIVRASLVSLALAGLTATAFAAAITPPGNGNSITLPAVLLPSVQNAVNLSQDSSALSMLGQKFGVQDGHFDFFSVRPSDGGDFKPMLRGGFGEGGLKLQLKW* |
Ga0070678_1021181261 | 3300005456 | Miscanthus Rhizosphere | MVLVPRIAKVALVGLAMAGLTTPVSAGGLMPGNGGTITLPTTLPPSVQYSLLPPTSSSVSSGFDVLGQKFGVQNGALDFFSVRPSEGGEFKPLFRGGVGQGGLKLQLKW* |
Ga0077121_103031862 | 3300005511 | Arabidopsis Rhizosphere | MKLVPHVAKVALVGLAMAGLTAPVFAAGLMPGNGGTIKLPTVLPPSVKESLSLLPSSGGTSGFDVLGQKFGVQNGALDFFSVRPSEGGEFKPLFRGGFGEGGLKLQLKW* |
Ga0070665_10000840712 | 3300005548 | Switchgrass Rhizosphere | MGRGMNLVPQIAAMAFVSLALAGLSQTASAEGISPGNGGSIVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW* |
Ga0070665_1001257523 | 3300005548 | Switchgrass Rhizosphere | MKLVPQLAKVALVGLAMAGLAAPAFAAGLMPGNGGTIKLPTALPPSVQESLASSLLPADGVSSGFDVLGQKFGVQNGRMDFFSVRPSEGGEFKPLFRGGFGEGGLKLQLKW* |
Ga0066704_102683732 | 3300005557 | Soil | MNLVPQTRMALVSLAMTGLTATAFAAAITAPGNGNSITLPAVLLPSVQDSVLPVQGTSSFDMMMGQKFGVQNGHLDFFSVRPADGGDFKPLLRGGVGEGGLKLQLKW* |
Ga0066708_105334741 | 3300005576 | Soil | PAPLLATRQTATKVSRPSIRRQRGAGMNLVPRIARVGLVSLAMAGLTESAFAGGISPGNGGSLTLPTVLPPSVRDSLLPIDGSSFEALGQKFGVQNGRLDFFSVQSDGGGDFKPLLHGGVGEGGLKIQLKW* |
Ga0068858_1000404465 | 3300005842 | Switchgrass Rhizosphere | MNLVPQIAVMAFVSLALAGLSQTASAEGISPGNGGSIVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW* |
Ga0066652_1010813762 | 3300006046 | Soil | MTFVPRVAKIAMVSLALAGLTELSFAGGISPGNGGAITLPTVLPPSVQDSLLPATTTGTSSFDLLGQKFGVQDGRMDFFSVRPSDSGDFKPLLRGGFGEGG |
Ga0097621_1000000469 | 3300006237 | Miscanthus Rhizosphere | MNSRKTRLAIVSLALAGLTAPAFAGGLSPGNGGTIVLPTVLPPSVQDSMYALVPTNGYSSFDVLGQKFGVQDGRMDFFSVRPSDGGDFKPLFRGGVGEGGLKLQLKW* |
Ga0097621_1004609921 | 3300006237 | Miscanthus Rhizosphere | MGRGMNLVPQIAAMALVSLALAGLSQTASAEGISPGNGGSIVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW* |
Ga0097621_1008073102 | 3300006237 | Miscanthus Rhizosphere | MNLVPQMARTALVSLALVGLTATAFAAAITAPGNGNSITLPAVLLPSVQDSVMPVQGTSSFDMIMGQKFGVQNGHLDFFSLRPADGGDFKPLLRGGVGEGGLKLQLKW* |
Ga0097621_1010065261 | 3300006237 | Miscanthus Rhizosphere | HKQADRLSDGMGAGMNSRKTGLAIVSLALAGLSAPAFAGGLSPGNGGTIVLPTVLPPSVQDSLLPVQNSSSFDSLGQKFGVENGKLDFFSMRPADNGDFKPLLRGGVGGGGLQLQLKW* |
Ga0097621_1023646512 | 3300006237 | Miscanthus Rhizosphere | VSLALVGLTATAFAAAITAPGNGNSITLPAVLLPSVQDSVMPVQGTSSFDMIMGQKFGVQNGHLDFFSLRPADGGDFKPLLRGGVGEGGLKLQLKW* |
Ga0068871_1003660891 | 3300006358 | Miscanthus Rhizosphere | MNLVPQIAAMALVSLALAGLSQTASAEGISPGNGGSMILPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFF |
Ga0105240_103861613 | 3300009093 | Corn Rhizosphere | MNLVPQIAAMALVSLALAGLSQTASAEGISPGNGGSMILPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPTDGGAFKPLLRGGVGGGGLQLQLKW* |
Ga0105245_104759302 | 3300009098 | Miscanthus Rhizosphere | MNLVPQMARTAFVSLALVGLTATAFAAAITAPGNGNSITLPAVLLPSVQDSVLPVQGTSSFDMIMGQKFGVQNGHLDFFSLRPADGGDFKPLLRGGVGEGGLKLQLKW* |
Ga0105245_115046562 | 3300009098 | Miscanthus Rhizosphere | MGAGMNSRKTGLAIVSLALAGLSVPAFAGGLSPGNGGTIALPTVLPPSVQNSMYALVPTTGSSSFDVLGQKFGVQDGRLDFFSVRPSDGGDFKPLFRGGVGEGGLKLQLKW* |
Ga0066709_1007463732 | 3300009137 | Grasslands Soil | MAGLTESAFAGGISPGNGGSLTLPTVLPPSVRDSLLPIDGSSFEALGQKFGVQNGRLDFFSVQSDGGGDFKPLLHGGVGEGGLKIQLKW* |
Ga0105243_127552582 | 3300009148 | Miscanthus Rhizosphere | PRIAKVALVSLAMAGLTTPVSAGGLMPGNGGTITLPTVLPPSVQASLLPSTGSSVSSGFDVLGQKFGVQNGALDFFSVRPSEGGEFKPLFRGGFGQGGLKLQLKW* |
Ga0105243_127940271 | 3300009148 | Miscanthus Rhizosphere | SLVPQMARMALVSLAMTGLTATAFAAAITAPGNGNSITLPAVLVPSVQDSVMPVQGTSSFDMMMGQRFGVQNGHLDFFSVRPSDGGDFKPLLRGGVGEGGLKLQLKW* |
Ga0105241_120908611 | 3300009174 | Corn Rhizosphere | DRRSDGMGRGMNLVPQIAAMALVSLALAGLSQTASAEGISPGNGGSMILPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPTDGGAFKPLLRGGVGGGGLQLQLKW* |
Ga0105242_119821872 | 3300009176 | Miscanthus Rhizosphere | AMAFVSLALAGLSQTASAEGISPGNGGSIVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPTDGGAFKPLLRGGVGGGGLQLQLKW* |
Ga0105242_130558631 | 3300009176 | Miscanthus Rhizosphere | PIRRQVGAGHESMTFVPRVAKVAMVSLALAGLAAPVFAGGISPGNGGTIVLPTVLPPSVQDSLLPATTTGTSSFDLLGQKFGVENGRMDFFSVRPGDNGDFKPLLRGGFGEGGLKLQLKW |
Ga0105248_124507131 | 3300009177 | Switchgrass Rhizosphere | MAFVPLKAVAALVGLAGMWATGPACAGGLSPGNGGPIVLPTVLPPSVTETLASVRGASSFDALGAKFGVEAGRLDFFSMHPTEGGAFKPLLRGGVGDGGLRLQLKW* |
Ga0105238_128437071 | 3300009551 | Corn Rhizosphere | PADRRSDGVGGAGMNLVPQMVRATLVSLALTGLTATAFAAAITPPGNGNSITLPAVLLPSVQNAVNLGQDSSALSMLGQKFGVQDGRFDFFSVRPSDGGDFKPMLRGGFGEGGLKLQLKW |
Ga0105249_127496831 | 3300009553 | Switchgrass Rhizosphere | MVLVPRVAKVALVSLAMAGLATPAFAGGLMPGNGGTITLPTVLPPSVQASLLPSTGSGVSSGFDALGQKFGVQNGALDFFSVRPSEGGEFKPLFRGGLGQGGLKLQLKW* |
Ga0105239_106892972 | 3300010375 | Corn Rhizosphere | MNLVPQIAAMALVSLALAGLSQTASAEGISPGNGGSIILPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW* |
Ga0105246_103661062 | 3300011119 | Miscanthus Rhizosphere | MGAGMNSRKTGLAIVSLALAGLAAPVFAGGLSPGNGGTIVLPTVLPPSVQDSMYALVPTTGSSSFDVLGQKFGVQDGRLDFFSVLPVDVKKIKPLFRGGVGEGGLKLQLKW* |
Ga0105246_111626391 | 3300011119 | Miscanthus Rhizosphere | GGRVERGMKLVPQIAGMALVSLVVTGLTGPVFAGGISPGNGGAITLPTVLPPSVQDALLPASGSSVSSGFDLLGQKFGVRDGRLDFFSVRPSDGGDFKPLLRGGFGEGGLKLQLKW* |
Ga0137385_101120822 | 3300012359 | Vadose Zone Soil | MAGLIESAFAGGISPGNGGSITLPTVLPPSVRDSLLPIDGSSFDALGQKFGVQNGRLDFFSVQSDGSGDFKPLLHGGVGEGGLKIQLKW* |
Ga0150984_1094014241 | 3300012469 | Avena Fatua Rhizosphere | SDGMGRGMNLVPQIAAMALVSVALAGLSQAALAEGISPGNGGSIILPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW* |
Ga0150984_1185437621 | 3300012469 | Avena Fatua Rhizosphere | ARGAGMNSRKTRLAIVSLALAGLAAPAFAGGLSPGNGGTIVLPTVLPPSVQDSLLPIQGPSSFDALGQKFGVENGRLDFFSMRPADNGDFKPLLRGGVGGGGLQLQLKW* |
Ga0137398_111984621 | 3300012683 | Vadose Zone Soil | LVSLAVAGLTETVFAGEIAPGNGGSITLPSTVLPAVLPPSVQDSLLPANGYSSFDVLGQKFGVQNGQLDFFSMRPDNSGAFKPLLRGGVGDGGLQLQLKW* |
Ga0137407_101780832 | 3300012930 | Vadose Zone Soil | VAGLTETVFAGEIAPGNGGSITLPSTVLPAVLPPSVQDSLLPANGYSSFDVLGQKFGVQNGQLDFFSMRPDNSGAFKPLLRGGVGDGGLQLQLKW* |
Ga0157374_125762921 | 3300013296 | Miscanthus Rhizosphere | MGAGMNSRKTGLVIVSLALAGLAAPAFAGGLSPGNGGTIVLPTVLPPSVQDSLYALVPTNGYSSFDALGHRFGVQDGRLDFFSVRPSDGGDFKPLFRGGVGEGGLKLQLKW* |
Ga0157374_128948041 | 3300013296 | Miscanthus Rhizosphere | VVGLVGLTAPAFAGGLMPGNGGSILLPLTLPPSSQNSVSLTDPHSGFDVLGQKFGVRDGRLDFFSVRPSDNDDFKPLLRGGVGGGGLQLQLKW* |
Ga0157378_106394413 | 3300013297 | Miscanthus Rhizosphere | MNLVPQMARMALVSLAMTGLTATAFAAAITAPGNGNSITLPAVLVPSVQDSVMPVQGTSSFDMMMGQRFGVQNGHLDFFSVRPIAFRNIKPLLRGGVGEGGLKLQLKW* |
Ga0163162_103395632 | 3300013306 | Switchgrass Rhizosphere | MAFVPLKAVAALVGLAGMWATGPACAGGLSPGNGGPIVLPTVLPPSVTDTLASVRGASSFDALGAKFGVEAGRLDFFSLRPTDGGAFKPLLRGGVGDGGLRLQLKW* |
Ga0163162_106401382 | 3300013306 | Switchgrass Rhizosphere | QIAAMAFVSLALAGLSQTASAEGISPGNGGSIVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW* |
Ga0163162_134355841 | 3300013306 | Switchgrass Rhizosphere | MTFVPRVAKVAMVSLALAGLAAPVFAGGISPGNGGTIVLPTVLPPSVQDSLLPATTTGTSSFDLLGQKFGVENGRMDFFSVRPGDNGDFKPLLRGGFGA |
Ga0157375_128492592 | 3300013308 | Miscanthus Rhizosphere | MGAGMNSRKTGLAIVSLALAGLSAPAFAGGLSPGNGGTIVLPTVLPPSVQDSLLPVQNSSSFDSLGQKFGVENGKLDFFSMRPADNGDFKPLFRGGVGGGGLQLQLKW* |
Ga0163163_103942152 | 3300014325 | Switchgrass Rhizosphere | MNLVPQIAAMALVSQALAGLSQTASAEGISPGNGGSMVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW* |
Ga0157376_105618051 | 3300014969 | Miscanthus Rhizosphere | MGAGMNSRKTGLAIVSLALAGLSVPAFAGGLSPGNGGTIVLPTVLPPSVQDSMHGLVPTNGSSSFDVLGQKFGVQDGRLDFFSVRPSDGGDFKPLFRGGVGEGGLKLQLKW* |
Ga0157376_109321321 | 3300014969 | Miscanthus Rhizosphere | MGAGMNSRKTGLVIVSLALAGLSAPAFAGGLSPGNGGTIVLPTVLPPSVQDSLLPVQNSSSFDSLGQKFGVENGKLDFFSMRPADNGDFKPLLRGGVGGGGLQLQLKW* |
Ga0167667_10010898 | 3300015189 | Glacier Forefield Soil | LAVAGLAEPAFAGGLSPGNGGTIVLPTVLPPSVQDSLYSLAPAAGYSSFDALGQKFGVQDGRLDFFSVRPSDNGDFKPLLRGGVGEGGLKLQLKW* |
Ga0137412_109305361 | 3300015242 | Vadose Zone Soil | MALVGLAMAGLTEPAFSGGISPGNGGSITLPTVLPPSVQDSLYSLLPASGYSSLDVLGQKFGVQNGQLDFFSMRPVDGGTFKPLLRGGVGEGGLKLQLKW* |
Ga0190274_108206922 | 3300018476 | Soil | MKPVPQMAKVALVGLAMAGLTAPVFAGGMMPGNGGSITLPTVLPPSVQESLLPFNGSSVLSGFDVLGQKFGVQNGRLDFFSVRPSEGGEFKPLLRGGVGEGGLKLQLKW |
Ga0193752_10504982 | 3300020027 | Soil | MKLVPQIAKVALVGLAMAGLTAPVFAGGLMPGNGGTIKLPTVLPPSVQESLSLLPASGGTSGFDMLGQKFGVQEGRLDFFSVRPSEGGEFKPLFRGGVGEGGLKLQLKW |
Ga0193752_10703351 | 3300020027 | Soil | MNLLPGIFRVALVSLAVAGFTELAFAGGISPGNGGSIALPFVPPPSVRDSLLPTNGSSGFDALGQRFGVQDGRLDFFSVRPDGSGDFKPLLRGGVGEGGLKLQLKW |
Ga0193753_100050454 | 3300020034 | Soil | MNLLPGIFRVTLVSLAVAGLAESAFAGGISPGNGGSITIPSVLPPSVRDSLLPANGYSGFDALGQKFGVQDGRLDFFSMRPDGSGDFKPLLRGGVGEGGLKLQLKW |
Ga0210404_100556302 | 3300021088 | Soil | AMCQTATKASRPSIRRHRGADMNLVPRMARVALVSLAVTGLTQSALAGGIMPGNGGSITLPSVLPPSVLGSLPPANGYAGFDALGQKFGVQNGRLDFFSVRGDGSGDFKPLLRGGVGDGGLKLQLKW |
Ga0210400_101222992 | 3300021170 | Soil | VLAPFRCCGRTGPGPPRKAGNRPAPLLAMCQTATKASRPSIRRHRGADMNLVPRMARVALVSLAVTGLTESALAGGIMPGNGGSITLPSVLPPSVLGSLPPANGYAGFDALGQKFGVQNGRLDFFSVRGDGSGDFKPLLRGGVGDGGLKLQLKW |
Ga0210408_104296421 | 3300021178 | Soil | MNLVPRMARVALVSLAVTGLTESALAGGIMPGNGGSITLPSVLPPSVLGSLPPANGYAGFDALGQKFGVQNGRLDFFSVRGDGSGDFKPLLRGGVGDGGLKLQLKW |
Ga0210396_117710871 | 3300021180 | Soil | MGRGMTFVPRIARFGLASLGVVSLGLLSLAGAGLTTSALAGEIAPGNGGSLTQPSLILPSVLPPSVQGSLLPMNDSSSFDMLGHKFGVQNGQLDFFNMRPDNSGDFKPLLRGGVGDGGLQLQLKW |
Ga0210383_111709171 | 3300021407 | Soil | MTFVPRIARFGLASLGLASLGLLSLAGAGLTTSALAGEIAPGNGGSLTQPSLILPSVLPPSVQGSLLPMNDSSSFDMLGHKFGVQNGQLDFFNMRPDNSGDFKPLLRGGVGDGGLQLQLK |
Ga0210394_114811391 | 3300021420 | Soil | MTFVPRIARFGLASLGVVSLGLLSLAGAGLTTSALAGEIAPGNGGSLTQPSLILPSVLPPSVQGSLLPMNDSSSFDMLGHKFGVQNGQLDFFNMRPDNSGDFKPLLRGGVGDGGLQLQLK |
Ga0207680_100330493 | 3300025903 | Switchgrass Rhizosphere | MGRGMNLVPQIAVMAFVSLALAGLSQTASAEGISPGNGGSIVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW |
Ga0207680_103433481 | 3300025903 | Switchgrass Rhizosphere | MNVVPQIVRASLVSLALAGLAGTALAGGLSPGNGGTITLPTVLPPSVQNTLVLPATTATSSFDVLGQKFGVENGRLDFFSVRPGDSGDCKPMLRGGFGEGGLKLQLKW |
Ga0207645_103521633 | 3300025907 | Miscanthus Rhizosphere | MKLVPQITKVALVGLAMAGLAAPVFAGGIMPGNGGSITLPTVLPPSVQDSLLLPTTGGSSGFDMLGQKFGVQNGRLDFFSVRPSEGGDFKPLFRGGVGEGGLKLQLKW |
Ga0207654_101747512 | 3300025911 | Corn Rhizosphere | MAFVSLALAGLSQTASAEGISPGNGGSIVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPTDGGAFKPLLRGGVGGGGLQLQLKW |
Ga0207654_106262171 | 3300025911 | Corn Rhizosphere | MNLVPQMARTALVSLALVGLTATAFAAAITAPGNGNSITLPAVLLPSVQDSVMPVQGTSSFDMIMGQKFGVQNGHLDFFSLRPADGGDFKPLLRGGVGEGGLKLQLKW |
Ga0207695_102486532 | 3300025913 | Corn Rhizosphere | MNLVPQIAAMALVSLALAGLSQTASAEGISPGNGGSMILPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPTDGGAFKPLLRGGVGGGGLQLQLKW |
Ga0207657_100856593 | 3300025919 | Corn Rhizosphere | MNVVPQIVRASLVSLALAGLAGTALAGGLSPGNGGTITLPTVLPPSVQNTLVLPATTAMSSFDVLGQKFGVENGRLDFFSVRPGDSGDFKPMLRGGFGEGGLKLQLKW |
Ga0207694_110525661 | 3300025924 | Corn Rhizosphere | MGRGMNLVPQIAAMAFVSLALAGLSQTASAEGISPGNGGSIVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW |
Ga0207709_117190671 | 3300025935 | Miscanthus Rhizosphere | SDGGMGAGMNSRKTGLAIVSLALAGLSVPAFAGGLSPGNGGTIVLPTVLPPSVQDSMHGLVPTNGSSSFDVLGQKFGVQDGRLDFFSVRPSDGGDFKPLLRGGVGEGGLKLQLKW |
Ga0207669_110955941 | 3300025937 | Miscanthus Rhizosphere | MKLVPQITKVALVGLAMAGLAAPVFAGGIMPGNGGSITLPTVLPPSVQDSLLLPTTGGSSGFDMLGQKFGVQNGRLDFFSVRPSEGGDFKPLFRGGVGEGGLKLQ |
Ga0207669_114890611 | 3300025937 | Miscanthus Rhizosphere | MVLVPRIAKVALVGLAMAGLTTPVSAGGLMPGNGGTITLPTTLPPSVQYSLLPPTSSSVSSGFDVLGQKFGVQNGALDFFSVRPSEGGEFKPLFRGGVGQGGLKLQLKW |
Ga0207711_100633115 | 3300025941 | Switchgrass Rhizosphere | MNLVPQIAAMAFVSLALAGLSQTASAEGISPGNGGSIVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW |
Ga0207711_103062905 | 3300025941 | Switchgrass Rhizosphere | MAFVPLKAVAALVGLAGMWATGPACAGGLSPGNGGPIVLPTVLPPSVTETLASVRGASSFDALGAKFGVEAGRLDFFSMHPTEGGAFKPLLRGGVGDGGLRLQLKW |
Ga0207689_101806653 | 3300025942 | Miscanthus Rhizosphere | MGRGMNLVPQIAAMALVSLALAGLSQTASAEGISPGNGGSMILPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPTDGGAFKPLLRGGVGGGGLQLQLKW |
Ga0207689_113000531 | 3300025942 | Miscanthus Rhizosphere | GLAMAGLAAPVFAGGIMPGNGGSITLPTVLPPSVQDSLLLPTTGGSSGFDMLGQKFGVQNGRLDFFSVRPSEGGDFKPLFRGGVGEGGLKLQLKW |
Ga0207651_120486551 | 3300025960 | Switchgrass Rhizosphere | MKLVPQITKVALVGLAMAGLAAPVFAGGIMPGNGGSITLPTVLPPSVQDSLLLPTTGGSSGFDMLGQKFGVQNGRLDFFSVRPSEGGDFKPLFRGGVGE |
Ga0207677_109197621 | 3300026023 | Miscanthus Rhizosphere | MAFVSLALAGLSQTASAEGISPGNGGSIVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW |
Ga0207703_100219035 | 3300026035 | Switchgrass Rhizosphere | MNLVPQIAVMAFVSLALAGLSQTASAEGISPGNGGSIVLPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW |
Ga0207639_101788601 | 3300026041 | Corn Rhizosphere | MNVVPQIVRASLVSLALAGLAGTALAGGLSPGNGGTITLPTVLPPSVQNTLVLPATTAVSSFDVLGQKFGVENGRLDFFSVRPGDSGDFKPMLRGGF |
Ga0207678_104121283 | 3300026067 | Corn Rhizosphere | MNVVPQIVRASLVSLALAGLTATAFAAAITPPGNGNSITLPAVLLPSVQNAVNLSQDSSALSMLGQKFGVQDGHFDFFSVRPSDGGDFKPMLRGGFGEGGLKLQLKW |
Ga0207676_124680701 | 3300026095 | Switchgrass Rhizosphere | GLSQTASAEGISPGNGGSIILPSVLPPSVRDSLLSASGSSGLEALGQKFGLQNGRLDFFSTSPADGGAFKPLLRGGVGGGGLQLQLKW |
Ga0268266_100090402 | 3300028379 | Switchgrass Rhizosphere | MGGAGMNVVPQIVRASLVSLALAGLAGTALAGGLSPGNGGTITLPTVLPPSVQNTLVLPATTAMSSFDVLGQKFGVENGRLDFFSVRPGDSGDFKPMLRGGFGEGGLKLQLKW |
Ga0311336_121060441 | 3300029990 | Fen | MNFVPRIVAVVGLAVAGLCHPAFGGDLLPGNGGGILPPLSLPPSTQDSLTPFGVYSGFDVLGQKFGVQNGRLDFFSMRPDDGGNFKPLLRGGVGEGGLQLQLKW |
Ga0170824_1013543131 | 3300031231 | Forest Soil | AGMRLVPQTAIIALVGLAVAGLTGSALAGVVAPGNGGSITFPSTALPAVLPPSVQDSVLPASGYSSFDMLGQKFGVQNGQLDFFSMRPDNSGTFKPLLRGGVSDGGLQLQLKW |
Ga0170824_1113883012 | 3300031231 | Forest Soil | MASVPLKAVAALVGLAGIWATAPACAAGLSPGNGGPIVLPTVLPPSVTDTLASVRGASSFDALGAKFGVEAGRLDFFSLRPADGGAFKPLLRGGVGDGGLRLQLKW |
Ga0170820_172078772 | 3300031446 | Forest Soil | LAVAGLTGSALAGVVAPGNGGSITFPSTALPAVLPPSVQDSVLPASGYSSFDMLGQKFGVQNGQLDFFSMRPDNSGAFKPLLRGGVSDGGLQLQLKW |
Ga0307513_103232171 | 3300031456 | Ectomycorrhiza | MKLVPQIAKVALVSLAMTGLTAPVFAGGMMPGNGGTITLPTILPPSVQESLLPATGALSGFDMLGQKFGVQDGRLDFFSVRPSEGGEFKPLFRGGFGEGGLKLQLKW |
Ga0170818_1030563452 | 3300031474 | Forest Soil | AGMRLVPQTAIIALVGLAVAGLTGSALAGVVAPGNGGSITFPSTALPAVLPPSVQDSVLPASGYSSFDMLGQKFGVQNGQLDFFSMRPDNSGAFKPLLRGGVSDGGLQLQLKW |
Ga0307516_100245104 | 3300031730 | Ectomycorrhiza | MKLVPRITRVALISLAIAGLTESARAAAVMAPGNGGAITQPILPSVLSPTVSDSLYPSNSISSFDMLGQKFNVQNGQLDFFSMRPDDGTFKPLLHGGVGNGGLQLQLKW |
Ga0307477_111674231 | 3300031753 | Hardwood Forest Soil | RCCGRTGPGPPRKAGNRPAPLLAMCQTATKASRPSIRRHRGADMNLVPRMARVALVSLAVTGLTESALAGGIMPGNGGSITLPSVLPPSVLGSLPPANGYAGFDALGQKFGVQNGRLDFFSVRGDGSGDFKPLLRGGVGDGGLKLQLKW |
Ga0302322_1026873231 | 3300031902 | Fen | AGLWSPAFAADLLPGNGGGILPPLTLPPATQDSLTPFGVYSGFDVLGQKFGVQNGRLDFFSMRPDDGGNFKPLLRGGVGEGGLQLQLKW |
Ga0307479_101860833 | 3300031962 | Hardwood Forest Soil | MARVALVSLAVTGLTQSALAGGIMPGNGGSITLPSVLPPSVLGSLPPANGYAGFDALGQKFGVQNGRLDFFSVRGDGSGDFKPLLRGGVGDGGLKLQLKW |
Ga0307409_1028827761 | 3300031995 | Rhizosphere | MIFVPRITVFVSLAVVGLSTTAFAGGISPGNGSSITLPTILPPSVQGSLPPASGAASGFDMLGQKFGVQDGRLDFFSMRPKDSGDFKPLLRGGFGEGGLKLQLKW |
Ga0307470_100265832 | 3300032174 | Hardwood Forest Soil | MSFVPHITRVAVVSLALAGLSTPVFAGGISPGNGGPVIVPSVLPPSVRDSLLPTNSSSSFDLLEQKFGVQNGRLDFFSTRPDDSGAFKPLLRGGVGDGGLQLQLKW |
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