Metagenome / Metatranscriptome Family F103545

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103545
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	115 residues
Representative Sequence	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEAAARRDQDRPELAAWQASAERHLTGPGRWYECPVVHTMKDGDAGEAGFVRVVQGR
Number of Associated Samples	72
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.45 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	96.04 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.376 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (29.703 % of family members)
Environment Ontology (ENVO)	Unclassified (38.614 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.614 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.63% β-sheet: 35.14% Coil/Unstructured: 34.23%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00441	Acyl-CoA_dh_1	31.68
PF02771	Acyl-CoA_dh_N	5.94
PF02770	Acyl-CoA_dh_M	3.96
PF02687	FtsX	0.99
PF13672	PP2C_2	0.99
PF01909	NTP_transf_2	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	41.58

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.38 %
Unclassified	root	N/A	37.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.38 %
Unclassified	root	N/A	37.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.38 %
Unclassified	root	N/A	37.62 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	49.50 %
Unclassified	root	N/A	37.62 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	49.50 %
Unclassified	root	N/A	37.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.62 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4.95 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.95 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.98 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.62 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.95 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	4.95 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.98 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.62 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	4.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.95 %
unclassified Intrasporangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → unclassified Intrasporangiaceae	1.98 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.62 %
Actinopolymorpha alba	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	4.95 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.95 %
Intrasporangiaceae bacterium URHB0013	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → unclassified Intrasporangiaceae → Intrasporangiaceae bacterium URHB0013	1.98 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000550\|F24TB_11149482	Not Available	644	Open in IMG/M
3300003373\|JGI25407J50210_10138744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → unclassified Intrasporangiaceae → Intrasporangiaceae bacterium URHB0013	599	Open in IMG/M
3300003373\|JGI25407J50210_10150582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300003373\|JGI25407J50210_10166453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	543	Open in IMG/M
3300003373\|JGI25407J50210_10172739	Not Available	533	Open in IMG/M
3300004016\|Ga0058689_10049787	Not Available	775	Open in IMG/M
3300005562\|Ga0058697_10081414	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300005562\|Ga0058697_10224788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	862	Open in IMG/M
3300005985\|Ga0081539_10303123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300005985\|Ga0081539_10335108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	640	Open in IMG/M
3300005985\|Ga0081539_10407900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300006194\|Ga0075427_10006664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1680	Open in IMG/M
3300006844\|Ga0075428_100669195	All Organisms → cellular organisms → Bacteria	1107	Open in IMG/M
3300006846\|Ga0075430_101446169	Not Available	565	Open in IMG/M
3300006847\|Ga0075431_101682111	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300006854\|Ga0075425_101832474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300006969\|Ga0075419_10588364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300007076\|Ga0075435_102009358	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300009156\|Ga0111538_12632177	Not Available	631	Open in IMG/M
3300009156\|Ga0111538_14114092	Not Available	502	Open in IMG/M
3300009789\|Ga0126307_10506453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	974	Open in IMG/M
3300009789\|Ga0126307_10575781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	909	Open in IMG/M
3300009840\|Ga0126313_10248337	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300010038\|Ga0126315_10274493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300010038\|Ga0126315_10622139	Not Available	699	Open in IMG/M
3300010040\|Ga0126308_10322410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1019	Open in IMG/M
3300010042\|Ga0126314_11190624	Not Available	569	Open in IMG/M
3300010044\|Ga0126310_10235563	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300010045\|Ga0126311_10823470	Not Available	750	Open in IMG/M
3300010045\|Ga0126311_10851717	Not Available	738	Open in IMG/M
3300010166\|Ga0126306_10017938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4632	Open in IMG/M
3300010166\|Ga0126306_10541500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	924	Open in IMG/M
3300012903\|Ga0157289_10074008	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300014487\|Ga0182000_10109925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300014487\|Ga0182000_10322820	Not Available	653	Open in IMG/M
3300014487\|Ga0182000_10370101	Not Available	625	Open in IMG/M
3300014487\|Ga0182000_10383173	Not Available	617	Open in IMG/M
3300017965\|Ga0190266_10349641	Not Available	796	Open in IMG/M
3300017965\|Ga0190266_10797657	Not Available	605	Open in IMG/M
3300017997\|Ga0184610_1227838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300018000\|Ga0184604_10261442	Not Available	607	Open in IMG/M
3300018054\|Ga0184621_10188658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	740	Open in IMG/M
3300018072\|Ga0184635_10414327	Not Available	508	Open in IMG/M
3300018073\|Ga0184624_10503459	Not Available	526	Open in IMG/M
3300018075\|Ga0184632_10112658	All Organisms → cellular organisms → Bacteria	1195	Open in IMG/M
3300018465\|Ga0190269_10753779	Not Available	691	Open in IMG/M
3300018465\|Ga0190269_11041526	Not Available	623	Open in IMG/M
3300018476\|Ga0190274_12934580	Not Available	572	Open in IMG/M
3300019377\|Ga0190264_11273450	Not Available	618	Open in IMG/M
3300019869\|Ga0193705_1103953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	515	Open in IMG/M
3300022195\|Ga0222625_1615669	Not Available	517	Open in IMG/M
3300022534\|Ga0224452_1281704	Not Available	507	Open in IMG/M
3300022694\|Ga0222623_10112718	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300026653\|Ga0208846_100082	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1956	Open in IMG/M
3300026680\|Ga0208345_100935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	897	Open in IMG/M
3300026790\|Ga0208710_100991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1463	Open in IMG/M
3300027750\|Ga0209461_10106216	Not Available	643	Open in IMG/M
3300027809\|Ga0209574_10119947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300028708\|Ga0307295_10182685	Not Available	591	Open in IMG/M
3300028710\|Ga0307322_10228291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300028715\|Ga0307313_10136748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	753	Open in IMG/M
3300028722\|Ga0307319_10234656	Not Available	603	Open in IMG/M
3300028755\|Ga0307316_10208320	Not Available	705	Open in IMG/M
3300028771\|Ga0307320_10440776	Not Available	524	Open in IMG/M
3300028782\|Ga0307306_10239032	Not Available	529	Open in IMG/M
3300028787\|Ga0307323_10167290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	794	Open in IMG/M
3300028791\|Ga0307290_10031019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1895	Open in IMG/M
3300028796\|Ga0307287_10203466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	751	Open in IMG/M
3300028799\|Ga0307284_10004817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3747	Open in IMG/M
3300028807\|Ga0307305_10100686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1335	Open in IMG/M
3300028807\|Ga0307305_10115929	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300028810\|Ga0307294_10019222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1782	Open in IMG/M
3300028814\|Ga0307302_10171843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1053	Open in IMG/M
3300028824\|Ga0307310_10311047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	768	Open in IMG/M
3300028828\|Ga0307312_10120429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1644	Open in IMG/M
3300028876\|Ga0307286_10252506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300028876\|Ga0307286_10290321	Not Available	603	Open in IMG/M
3300028878\|Ga0307278_10020131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3087	Open in IMG/M
3300028878\|Ga0307278_10095339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1338	Open in IMG/M
3300028881\|Ga0307277_10481436	Not Available	556	Open in IMG/M
3300030499\|Ga0268259_10060248	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	791	Open in IMG/M
3300030510\|Ga0268243_1062617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300030510\|Ga0268243_1195425	Not Available	502	Open in IMG/M
3300031731\|Ga0307405_10342248	All Organisms → cellular organisms → Bacteria	1150	Open in IMG/M
3300031903\|Ga0307407_11445984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	542	Open in IMG/M
3300031903\|Ga0307407_11703414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	502	Open in IMG/M
3300031995\|Ga0307409_100693914	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300031995\|Ga0307409_100992293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	857	Open in IMG/M
3300031995\|Ga0307409_101069329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	827	Open in IMG/M
3300032002\|Ga0307416_100645810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1142	Open in IMG/M
3300032002\|Ga0307416_103205136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba	547	Open in IMG/M
3300032004\|Ga0307414_10415810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1171	Open in IMG/M
3300032004\|Ga0307414_11153546	Not Available	717	Open in IMG/M
3300032004\|Ga0307414_11885272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → unclassified Intrasporangiaceae → Intrasporangiaceae bacterium URHB0013	558	Open in IMG/M
3300032005\|Ga0307411_11240124	Not Available	677	Open in IMG/M
3300032005\|Ga0307411_11526691	Not Available	614	Open in IMG/M
3300032005\|Ga0307411_11949030	Not Available	547	Open in IMG/M
3300032126\|Ga0307415_100011682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5039	Open in IMG/M
3300032126\|Ga0307415_100406823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1163	Open in IMG/M
3300032159\|Ga0268251_10535824	Not Available	529	Open in IMG/M
3300034172\|Ga0334913_013114	All Organisms → cellular organisms → Bacteria	1930	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.39%
Host-Associated	Host-Associated	38.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.48%
Plants	Host-Associated → Plants	38.61%
Aquatic	Environmental → Aquatic	8.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.75%
Sediment	Environmental → Aquatic → Sediment	7.92%
Roots	Host-Associated → Plants → Roots	3.96%
Phylloplane	Host-Associated → Plants → Phylloplane	3.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.97%
Phyllosphere	Host-Associated → Plants → Phyllosphere	2.97%
Freshwater	Environmental → Aquatic → Freshwater	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	24.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.92%
Loam	Environmental → Terrestrial → Soil → Loam	3.96%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.96%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	3.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.97%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	2.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	24.75%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.92%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.96%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	3.96%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.97%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	29.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	15.84%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	11.88%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.94%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	3.96%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	3.96%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.97%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	2.97%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.98%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.99%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300003373	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300004016	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz	Host-Associated	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300026653	Grasslands soil microbial communities from Nunn, Colorado, USA, that are Nitrogen fertilized - NN1105 (SPAdes)	Environmental	Open in IMG/M
3300026680	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized - NN609 (SPAdes)	Environmental	Open in IMG/M
3300026790	Grasslands soil microbial communities from Gorham, Kansas, USA that are Nitrogen fertilized -NN607 (SPAdes)	Environmental	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030499	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030510	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG (v2)	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032005	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032159	Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)	Host-Associated	Open in IMG/M
3300034172	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 9HMS	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_111494822	3300000550	Soil	VFIRILRGQVLDGAATLAEVSRWRQELGTGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDRPELAAWYAAAERHLEGPGRWYDC
JGI25407J50210_101387441	3300003373	Tabebuia Heterophylla Rhizosphere	VFIRILRGQVLDGAATLAEVSRWRQELGTGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDHPELAAWQASAERHLDGPGRWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAVMRAEVERTLRDRAPHVLGVTVAEHADGTGF
JGI25407J50210_101505822	3300003373	Tabebuia Heterophylla Rhizosphere	MLAEVARWGRDRGGALGWQRLTAGLGDGGELVLALRYDTEAAARRDRDRPELTDWQASAERHLDGPARWYDCPVVHTMKDGDAGAAGFVRV
JGI25407J50210_101664531	3300003373	Tabebuia Heterophylla Rhizosphere	MFIRILRGQAHDGAATLAEIARWRQELGAGVLGWQRLTAGVGDAGELVLALRYDTEAAARPDQDRPELAAWLASAERHLTGPVRWYDCPVVHTMKDGDAGQAGFVRVVQGRLADPIRLAAMRDEVERTLRDRAPHVLGVTVAEHADGTGFTELTYLTSER
JGI25407J50210_101727391	3300003373	Tabebuia Heterophylla Rhizosphere	VFIRILRGQVLDGAATLTEVSRWRQELGTGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDRPELAAWQASAERHLDGPGXWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVER
Ga0058689_100497871	3300004016	Agave	VFLRILRGQVYDSAATLAEVARWGRELGAGGLGWQRLTAGVGEGGELVLALRYDTEAAARRDRDLPELAAWQAAAERHLAGRAAWYDCPVVHTMKDGD
Ga0058697_100814141	3300005562	Agave	MFIRILRGQAYDGAATLAEIARWRRQLGAGVLGWQRLTAGIGEAGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLTGPGRWYDCPVVHTMKAGDAGEAGFVRVVQGRLADPVRLAAMRDEVERTLRD
Ga0058697_102247881	3300005562	Agave	MFIRILRGQAYDGAATLAEIARWCQELGAGVLGWQRLTAGIGDAGELVLALRYDAEAVARQDRDRPELAAWQASVERHLTGPGRWYDCPVVHTMKDGDAGQAG
Ga0081539_103031232	3300005985	Tabebuia Heterophylla Rhizosphere	VFIRILRGQVYDSAATLAEVARWGRQLGTAGLGWQRLTAGVGEGGELVLALRYDTEAAARRDRDRPELAAWQTAAERHLAGRASWYDCPVVHTMKDGDAGEAGFVRGVQGRLAD
Ga0081539_103351083	3300005985	Tabebuia Heterophylla Rhizosphere	VFIRILRGQVHDGAAALAALARWGRELGGGGLGWQRLTAGVGEGGELVLVLRYDTEAAARRDRHPPQP
Ga0081539_104079001	3300005985	Tabebuia Heterophylla Rhizosphere	VFIRILRGQVYDSGATLAEVARWGRELGAGGLGWQRLTAGVGEGGELVLALRYDTEAAAPPDRHRPPPAPRQSA
Ga0075427_100066643	3300006194	Populus Rhizosphere	MFIRILRGQAHDGVATLAEVARWRQELGVGVLGWRRLTAGIGDAGELVLALRYDTEAAAWRDRDRPEPAAWQASAERHLTGPGRWYDCPVIHTMKAGDAGEAGFVRVVQGRLADPVRLAAMRDEVERTLRDRAPHVLGV
Ga0075428_1006691953	3300006844	Populus Rhizosphere	MFIRILRGQAYDGTATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYGTEAAAGRDRDRWELTSWQASAERHLTGPGRWYDCPVVHAMKYGDAAEAGFVRVVQGRLA
Ga0075430_1014461691	3300006846	Populus Rhizosphere	VFIRILRGQAYDGAATLAAVNRWRQELGAGVLGWQRLTAGIGDGGELVLALRYDTETAARRDRDRPEPAAWQAAAERYLAGPGRWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLATMRAEVERTLRDRAPHV
Ga0075431_1016821111	3300006847	Populus Rhizosphere	MFIRILRGQAYDGTATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYGTEAAAGRDRDRWELTSWQASAERHLTGPGRWYDCPVVHAMKYGDAAEAGFVRVVQGRLADPVRLAAMRDEVERTLRDRAPHVLGV
Ga0075425_1018324741	3300006854	Populus Rhizosphere	MFIRILRGQAHDGVATLAEVARWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEAAAWRDRDRPEPAAWQASAERHLTGPGRWYDCPVIHTMKAGDAGEAGFVRVVQGRLA
Ga0075419_105883641	3300006969	Populus Rhizosphere	VFIRILRGQAYDGAAKLAAVNRWRQELGAGVLGWQRLTAGIGDGGELVLALRYDTETAARRDRDRPELAAWQAAAERHLAGPGRWYDCPVVHTMKDGDASEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHV
Ga0075435_1020093581	3300007076	Populus Rhizosphere	MFIRILRGHAYDGTATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYGTEAAAGRDRDRWELTSWQASAERHLTGPGRWYDCPVVHAMKYGDAAEAGFVRVVQGRLA
Ga0111538_126321772	3300009156	Populus Rhizosphere	MFIRILRGQAYDGTATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYGTEAAAGRDRDRWELTSWQASAERHLTGPGRWYDCPVVHAMKYGDAAEAGFVRVVQGRLADPVRLAAMRDEVER
Ga0111538_141140921	3300009156	Populus Rhizosphere	VFIRILRGQAYDGAATLAEVNRWRREFGAGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDRPELAAWQAAADRHLSGPGRWYDCPVVHTMKEGDAGEAGFVRVAQGPLDLGPHGGQPDRVGQTAL
Ga0126307_105064531	3300009789	Serpentine Soil	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYDTEAAAQPDRDRPELAAWQASVERHLTGPGR
Ga0126307_105757813	3300009789	Serpentine Soil	VFIRILRGQVYDSAATLAEVARWGRELGAGGLGWQRLTAGVGEGGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLAGRASWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVTVAEH
Ga0126313_102483373	3300009840	Serpentine Soil	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEAAARRDQDRPELAAWQASAERHLTGPGRWYECPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRDEVERTLRA
Ga0126315_102744931	3300010038	Serpentine Soil	VFIRILRGQVYDSAATLAEVARWGRELGTGGLGWQRLTAGVGEGGELVLALRYDTEAAARRDRDRPELAAWQA
Ga0126315_106221391	3300010038	Serpentine Soil	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYDTEAAAQQDRDRPELAAWQASVERHLTGPGRWYDCPVVHTMKDGDAGEAGF
Ga0126308_103224101	3300010040	Serpentine Soil	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYDTEAAAQQDRDRPELAAWQASVERHLTGPGRWYDCPVVHTMKDGDAGEAGFVRVVQGRL
Ga0126314_111906242	3300010042	Serpentine Soil	VFVRILRGQVLDGAATLAEVSRWRQELGTGVLGWRRLTAGIGDGGELVLALRYDTEAAAWRDRDRAEVAAWQASAERHLDGPG
Ga0126310_102355631	3300010044	Serpentine Soil	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYDTEAAARRDQDRPELAAWQASAERHLNGPGRWYDCPVVHTMKAGDAGEAGFVRVVQGRLADPVRLAAMRDEVERTLRDRAPHVLGV
Ga0126311_108234703	3300010045	Serpentine Soil	VFIRILRGQVYDSAATLAEVARWGRELGAGGLGWQRLTGGVGEGGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLAGRASWYD
Ga0126311_108517171	3300010045	Serpentine Soil	VFIRILRGQVYDGAATLAEVARWGRQLGAGGLGWQRLTAGVGEGGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLAGRASWYD
Ga0126306_100179387	3300010166	Serpentine Soil	VFIRILRGQAVDGAATLAEIDRFRRELGAGVLGWRRLTAGIGDGGELVLVLRYDTEAAARRDRDRAELAAWQAAADRHLAGPGSWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAE
Ga0126306_105415001	3300010166	Serpentine Soil	VFIRILRGQVVDGAATLAAVNRWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEATARRDRDRPELAAWQSAAERHLAGPGHWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAE
Ga0157289_100740081	3300012903	Soil	MFIRILRGQAYDGAATLAEVARWRQELGAGVLGWQRLTAGIGDAGEVVLALRYDTEAAARRDGDRPELAAWQASAERHLNGPGRWYDCPVVHTMKAGDAGEAGFVRVVQGRLADPVRLAAMRDEVERTLRDRAPHVLGVTVAEHADGTGFT
Ga0182000_101099251	3300014487	Soil	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYDTEAAARRDQDRPELAAWQASAERHLAGPGRWYDCPVVHTIKDGDAGEAGFVRVVQGRLADPIRLAAMRDEVERTLRDRAPHVLGVTVAEHADGTG
Ga0182000_103228202	3300014487	Soil	VFIRILRGQVHDSSATLAEVARWGRELGGGGLGWQRLTAGIGEGGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLAGRAHWYDCPVVHTMKDGDAVEAGFVRVVQGRL
Ga0182000_103701013	3300014487	Soil	VFIRILRGQAYDGAAALAEVNRWRQELGAGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDRPELAAWQAAADRHLTGPGRW
Ga0182000_103831732	3300014487	Soil	MFIRILRGQVYDGAATLAEIARWRQELGAGVLGWQRLTAGVGDAGELVLALRYDTEAAGTRDRDRPELAAWQASAERHLTGPGRWYDCPVVHTMKDGDTGEAGFVRVVQGRLADPVRLAAMRDEV
Ga0190266_103496412	3300017965	Soil	VFIRILRGQAYDGAAALAEVNRWRQELGAGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDRPELAAWQAAADRHLTGPGRWYDCPVVHTMKEGDAAEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVIVAEHADGTGFTELTYL
Ga0190266_107976571	3300017965	Soil	VFIRILRGQAYDGAATLAAVNRWRQELGAGVLGWQRLTAGIGDGGELVLAVRYDTETAARRDRDRPEPAAWQAA
Ga0184610_12278382	3300017997	Groundwater Sediment	VFIRILRGQAYDGTATLAEVGRWSRDLGTGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDRPELAAWQASAERHLAGPGRWYDCPVVHTMK
Ga0184604_102614422	3300018000	Groundwater Sediment	VRVFIRILRGQAYDGTATLAEVGRWSRDLGTGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDRPELAAWQEAAERHLTGPGRWYDCPVVHT
Ga0184621_101886582	3300018054	Groundwater Sediment	MFIRILRGQAHDGAATLAEVARWRQELGAGVLGWRRLTAGVGDDGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLTGPGRWYDCPVVHTMKDGDAGQAGFVRVVQGRLADPVRLAAMRAEVERT
Ga0184635_104143272	3300018072	Groundwater Sediment	VFIRILRGQAYDGAATLAAVNRWRQELGAGVLGWQRLTAGIGDGGELVLALRYDTETAARRDRDRPELAAWQAAAERHLAGPGRWYDCPVV
Ga0184624_105034592	3300018073	Groundwater Sediment	VFIRILRGQAYDGAAALAEVNRWRQELGAGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDRPELAAWQAAADRHLSGPGRWYDCPVVHTMKEGDAGEAGFV
Ga0184632_101126581	3300018075	Groundwater Sediment	VFIRILRGQAFNGAATRTELARWPQALSAGAPGWQRLTAGIGYEGELVLVLRYDTEMAARRDRERPELGAWQGSVEGHLVGPGQWYDCPVVHTMKDGDTGD
Ga0190269_107537792	3300018465	Soil	VFIRILRGQVVDGAATLAAVNRWRQELGGGVLGWRRLTAGIGDAGELVLALRYDTEATARRDRDRPELAAWQSAAERHLAGPGHWYDCPVVHTMKDGDAGEAGFVRVVQG
Ga0190269_110415262	3300018465	Soil	VFIRILRGQIYDSAASMAEVARWGRELGSGGLGWQRLTAGVGEGGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLAGRAAWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVTVAEH
Ga0190274_129345802	3300018476	Soil	VFIRILRGQAVYGAATLGEIDRFRRELGAGVLGWRRLTAGIGDGGELVLVLRYDTEAAARRDRDRPELAAWQAAADRHLAGPGSWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRA
Ga0190264_112734501	3300019377	Soil	VFIRILRGQAYDGAATLAAVNRWRQELGAGVLGWQRLTAGIGDGGELVLALRYDTETAARRDRDRPELAAWQASAERHLAGPGHWYD
Ga0193705_11039531	3300019869	Soil	GRPGGLVRVFIRILRGQAYDGTATLAEVGRWSRDLGTGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLTGPGRWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVTVAEHADGTGFTEDVGGAVAQGAL
Ga0222625_16156692	3300022195	Groundwater Sediment	MFIRILRGQAHDGAATLAEVARWRQELGAGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDRPELAAWQTAAERH
Ga0224452_12817041	3300022534	Groundwater Sediment	MFIRILRGQAHDGAATLAEVARWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEAAAWRDRDRPELAAWQASAERHLAGPGRWYDCPVVH
Ga0222623_101127183	3300022694	Groundwater Sediment	MFIRILRGQAHDGAATLAEVARWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEAAAWRDRDRPELAAWQA
Ga0208846_1000821	3300026653	Soil	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYDTEAAARRDQDRPELAAWQVSAERHLTGPGRWYECPVVHTMKDGDAGEAGFVRVVQGRLADPV
Ga0208345_1009353	3300026680	Soil	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYDTEAAARRELFNRLHDGRELGDRA
Ga0208710_1009913	3300026790	Soil	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYDTEAAARRDQDRPELAAWQASAERHLTGPGRWYECPVVHTMKDGDAGEAG
Ga0209461_101062161	3300027750	Agave	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYDTEAAADRDRDRPELTGWQASVERHLTGPGRWYDCPVVHT
Ga0209574_101199471	3300027809	Agave	MFIRILRGQAYDGAATLAEIARWRRQLGAGVLGWQRLTAGIGEAGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLTG
Ga0307295_101826852	3300028708	Soil	VRVFIRILRGQAYDGTATLAEVGRWSRDLGTGVLGWRRLTAGVGDGGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLTGPGRWYDCPVVHTMKDGDAGQAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVTVAEHADGTGFTE
Ga0307322_102282911	3300028710	Soil	VRVFIRILRGQAYDGTATLAEVGRWSRDLGTGVLGWRRLTAGVGDGGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLTGPGRWYDCPVV
Ga0307313_101367481	3300028715	Soil	VRVFIRILRGQAYDGTATLAEVGRWSRDLGTGVLGWRRLTAGVGDGGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLTGPGRW
Ga0307319_102346561	3300028722	Soil	VFIRILRGQVVDGAATLAAVNRWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEATARRDRDRPELAAWQSAAERHLAGPGHWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVTVAEHADGTGFTELTYLTSERETR
Ga0307316_102083202	3300028755	Soil	VFIRILRGQAYDGTATLAEVGRWSRDLGTGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDRPELAAWQTAAERHLTGPGRWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVTVAEHADGT
Ga0307320_104407761	3300028771	Soil	VFIRILRGQAYDGAAALAEVNRWRQELGAGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDRPELAAWQAAADRHLTGPGRWYDCPVVHTMKEGDAGEAGFVRVVQGRLADPVRLA
Ga0307306_102390321	3300028782	Soil	VRVFIRILRGQAYDGTATLAEVGRWSRDLGTGVLGWRRLTAGVGDGGELVLVLRYDTEAAARRDRDRPEL
Ga0307323_101672901	3300028787	Soil	VRVFIRILRGQAYDGTATLAEVGRWSRDLGTGVLGWRRLTAGVGDDGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLTGPGRW
Ga0307290_100310194	3300028791	Soil	MFIRILRGQAHDGAATLAEVARWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEAAAWRDRDRPELAAWQASAERHLAGPGRW
Ga0307287_102034663	3300028796	Soil	VFIRILRGQAYDGAATLAAVNRWRQQLGAGVLGWQRLTAGIGDGGELVLALRYDTETAARRDRDRPEPAAWQAAA
Ga0307284_100048171	3300028799	Soil	VRVFIRILRGQAYDGTATLAEVGRWSRDLGTGVLGWRRLTAGVGDGGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLTGP
Ga0307305_101006863	3300028807	Soil	MFIRILRGQAHDGAATLAEVARWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEAAAWRDRDRPELAAWQASAERHLAGPGRWYDCP
Ga0307305_101159293	3300028807	Soil	VRVFIRILRGQAYDGTATLAEVGRWSRDLGTGVLGWRRLTAGVGDGGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLTGPGRWYDCPVVHTMKDGD
Ga0307294_100192221	3300028810	Soil	MFIRILRGQAHDGAATLAEVARWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEAAAWRDRDRPELA
Ga0307302_101718433	3300028814	Soil	VFIRILRGQAYDGAATLAAVNRWRQELGAGVLGWQRLTAGIGDGGELVLALRYDTETAARRDRDRPEPAAWQAAAERHLAGPGRWYDCPVVHTMKDGDGGEAGFVRVVQGR
Ga0307310_103110471	3300028824	Soil	MFIRILRGQAHDGAATLAEVARWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEAAAWRDRDRPELAAWQASAERHLAGPGRWYDCPVVHTMKAGDAGEAGFLRVVQGRLADPVRLAAMRDEVERTLRDRAPHVLGVIVAEHADGTAF
Ga0307312_101204291	3300028828	Soil	VRVFIRILRGQAYDGTATLAEVGRWSRDLGTGVLGWRRLTAGVGDGGELVLVLRYDTEAAARRDRDRPELAAWQAAAERHLTGPGRWYDCPVVHTMKDGDAGQAGFVRVV
Ga0307286_102525061	3300028876	Soil	VRVFIRILRGQAYDGTATLAEVGRWSRDLGTGVLGWRRLTAGIGDGGELVLALRYDTEAAARRDRDRPELAAWQTAAERHLTGPGRWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRA
Ga0307286_102903211	3300028876	Soil	VFIRILRGQVVDGAATLAAVNRWRQELGGGVLGWRRLTAGIGDAGELVLALRYDTEATARRDRDRPELAAWQSAAERHLAGPGHWYDCPVVHTMKDGDAGEA
Ga0307278_100201314	3300028878	Soil	VFIRILRGQAYDGAATLAEVGRWCRDLGSGVLGWRRLTAGVGDGGELVLALRYDTEAAARRDRDRPELAAWLASAERHLTEPGRWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVL
Ga0307278_100953391	3300028878	Soil	MFIRILRGQAHDGAATLAEVARWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEAAAWRDRDRPELAAWQASAERHLAGPGRWYDCQVVHTMKAGDAGEA
Ga0307277_104814361	3300028881	Soil	VFIRILRGQAYDATATLAEVGRWRRDLGAGVLGWRRLTAGIGDGGELVLALRYDTESAARRDRDRPELAAWQASAERHLTGPGRWYDCPVVHTMKDG
Ga0268259_100602483	3300030499	Agave	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEAAARRDQDRPELAAWQVSAERHLTGPGRWY
Ga0268243_10626171	3300030510	Soil	MFIRILRGQVYDGAATLAEIARWRQELGAGVLGWQRLTAGVGDAGELVLALRYDTEAAGTRDRDRPELAAWQASAERHLTGPGRWYDCPVVHTMKDGDTGEAGFVRVVQGRLAD
Ga0268243_11954252	3300030510	Soil	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYDTEAAARRDQDRPELAAWQASAERHLTGPGRWYECPVVHTMKDGDAGEAGFVRVVQGRLADPVR
Ga0307405_103422481	3300031731	Rhizosphere	VFIRILRGQVYDGAATLAEVARWSRELGAGGLGWQRLTAGVGDGGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLAGRASWYDCPVVHTMKDGDTGEAGFVRVVQGRLADPVRLAAMRAEVERTLRD
Ga0307407_114459841	3300031903	Rhizosphere	VFLRIVRGQVYDSAATLAELARWGRELGARGLGWQRLTAGVGEGGELVLALRYDTEADARRDQDKPELAAWQAAAERLLAGPAVWYDCPVVHTMKDGDAGQAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVTVAEHADGTGFTELT
Ga0307407_117034141	3300031903	Rhizosphere	MFIRILRGQAYNGAATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYDTEAAARRDQDRPELAAWQASAERHLTGPGRWYDCPVVHTMKAGDAGEAGFVRVVQGRLADPVRLAAMRDEVERTLRDRAPHVLGVTVAEHADG
Ga0307409_1006939141	3300031995	Rhizosphere	VFLRIVRGQVYDSAATLAELARWGRELGARGLGWQRLTAGVGEGGELVLALRYDTEADARRDQDKPELAAWQAAAERLLAGPAVWYDCPVVHTMKDGDAGQAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVT
Ga0307409_1009922933	3300031995	Rhizosphere	VFVRILRGQVLDGAATLAEVSRWRQELGTGVLGWRRLTAGIGDGGELVLALRYDTEAAAWRDRDRAEVAAWQASAERHLDGPGRWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVIVAEHADGTGFTELTYLTSE
Ga0307409_1010693293	3300031995	Rhizosphere	VFIRILRGQVVDGAATLAAVNRWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEATARRDRDRPELAAWQSAAERHLAGPGHWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVL
Ga0307416_1006458101	3300032002	Rhizosphere	VFVRILRGQVLDGAATLAEVSRWRQELGTGVLGWRRLTAGIGDGGELVLALRYDTEAAAWRDRDRAEVAAWQASAERHLDGPGRWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVIVAEHADGTGFTELTYLT
Ga0307416_1032051361	3300032002	Rhizosphere	MFIRILRGQAYNGAATLAEIARWRQELGAGVLGWQRLTAGIGDAGELVLALRYDTEAAARRDQDRPELAAWQASAERHLTGPGRWYDCPVVHTMKAGDAGEAGFVRVVQGRLADPVRLAAMRDEVERTLRDRAPHVLGVTVAEHADGT
Ga0307414_104158101	3300032004	Rhizosphere	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEAAARRDQDRPELAAWQASAERHLTGPGRWYECPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRDEVERTLRARAPHV
Ga0307414_111535463	3300032004	Rhizosphere	VFIRILRGQVYDGAATLAEVARWGRQLGAGGLGWQRLTAGVGEGGELVLALRYDTEAAARRDRDRPELAAWQAAAE
Ga0307414_118852721	3300032004	Rhizosphere	VFVRILRGQVLDGAATLAEVSRWRQELGTGVLGWRRLTAGIGDGGELVLALRYDTEAAAQRDRDRPELAAWQASAERHLDGPGRWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVTVAEHADGTGFTELTYLTS
Ga0307411_112401241	3300032005	Rhizosphere	VFIRILRGQVYDGAATLAEVARWSRELGAGGLGWQRLTAGVGDGGELVLALRYDTEAAARRDRDRPELAAWQAAAERHLAGRASWYDCPVVHTMKDGDTGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVTVAEHADGTGFTELTYCTSERE
Ga0307411_115266912	3300032005	Rhizosphere	VFIRILRGQVLDGAATLAEVSRWRQELGTGVLGWRRLTAGIGDGGELVLALRYDTEAAAQRDRDRPELAAWQASAERHLDGPGRWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVT
Ga0307411_119490302	3300032005	Rhizosphere	VFVRILRGQVLDGAATLAEVSRWRQELGTGVLGWRRLTAGIGDGGELVLALRYDTEAAAWRDRDRAEVAAWQASAERHLDGPGRWYDCPVVHTMKDGDAGEAGFVRVVQGRL
Ga0307415_1000116821	3300032126	Rhizosphere	VFVRILRGQVLDGAATLAEVSRWRQELGTGVLGWRRLTAGIGDGGELVLALRYDTEAAAWRDRDRAEVAAWQASAERHLDGPGRWYDCPVVHTMKDGDAGEAGFVRVVQGRLADPVRLAAMRAEVERTLRDRAPHVLGVIVAEHADGT
Ga0307415_1004068233	3300032126	Rhizosphere	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWRRLTAGIGDAGELVLALRYDTEAAARRDQDRPELAAWQASAERHLTGPGRWYECPVVHTMKDGDAGEAGFVRVVQGR
Ga0268251_105358241	3300032159	Agave	MFIRILRGQAYDGAATLAEIARWCQELGAGVLGWQRLTAGIGDAGELVLALRYDAEAVARQDRDRPELAAWQASVERHLTGPGRWYDCPVVHTMKDGDAGQAGFVRAVQGRLADPVRLAAMRDEVERTLRDRAPHVLGVTVAEHADGTGFTELTYLTSERET
Ga0334913_013114_1442_1930	3300034172	Sub-Biocrust Soil	MFIRILRGQAYDGAATLAEIARWRQELGAGVLGWQRLTAGVGDAGELVLAVRYDTEAAAHRDRDRPELTAWQASVERHLTGPGRWYDCPVVHTMKAGDAGEAGFVRVVQGRLADPVRLAAMRDEVERTLRDRAPHVLGVTVAEHADGTGFTELTYLTSERETR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103545

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences