NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F103576

Metagenome / Metatranscriptome Family F103576

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F103576
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 57 residues
Representative Sequence MISEHDRQILSQLPAWNPTGDIVAQRRAWEELATVYNHDLPAIGGLEQNVELR
Number of Associated Samples 91
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 85.15 %
% of genes near scaffold ends (potentially truncated) 94.06 %
% of genes from short scaffolds (< 2000 bps) 90.10 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.079 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(14.852 % of family members)
Environment Ontology (ENVO) Unclassified
(29.703 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.485 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 39.51%    β-sheet: 0.00%    Coil/Unstructured: 60.49%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.48
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF00816Histone_HNS 29.70
PF01729QRPTase_C 7.92
PF02749QRPTase_N 6.93
PF01042Ribonuc_L-PSP 4.95
PF08734GYD 3.96
PF09834DUF2061 2.97
PF13493DUF4118 1.98
PF02518HATPase_c 1.98
PF00089Trypsin 1.98
PF03734YkuD 1.98
PF03401TctC 0.99
PF00072Response_reg 0.99
PF02627CMD 0.99
PF00583Acetyltransf_1 0.99
PF09084NMT1 0.99
PF02566OsmC 0.99
PF09209CecR_C 0.99
PF13431TPR_17 0.99
PF00144Beta-lactamase 0.99
PF02445NadA 0.99
PF01479S4 0.99
PF07746LigA 0.99
PF00999Na_H_Exchanger 0.99
PF07690MFS_1 0.99
PF13557Phenol_MetA_deg 0.99
PF14310Fn3-like 0.99
PF06155GBBH-like_N 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG2916DNA-binding protein H-NSTranscription [K] 29.70
COG0157Nicotinate-nucleotide pyrophosphorylaseCoenzyme transport and metabolism [H] 14.85
COG1488Nicotinic acid phosphoribosyltransferaseCoenzyme transport and metabolism [H] 14.85
COG0251Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 familyDefense mechanisms [V] 4.95
COG4274Uncharacterized conserved protein, contains GYD domainFunction unknown [S] 3.96
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 1.98
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 1.98
COG0025NhaP-type Na+/H+ or K+/H+ antiporterInorganic ion transport and metabolism [P] 0.99
COG0379Quinolinate synthaseCoenzyme transport and metabolism [H] 0.99
COG0475Kef-type K+ transport system, membrane component KefBInorganic ion transport and metabolism [P] 0.99
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.99
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.99
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.99
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.99
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 0.99
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 0.99
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.99
COG2367Beta-lactamase class ADefense mechanisms [V] 0.99
COG3004Na+/H+ antiporter NhaAEnergy production and conversion [C] 0.99
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.99
COG3263NhaP-type Na+/H+ and K+/H+ antiporter with C-terminal TrkAC and CorC domainsEnergy production and conversion [C] 0.99
COG3536Uncharacterized conserved protein, DUF971 familyFunction unknown [S] 0.99
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 0.99
COG4651Predicted Kef-type K+ transport protein, K+/H+ antiporter domainInorganic ion transport and metabolism [P] 0.99

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.08 %
UnclassifiedrootN/A7.92 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000364|INPhiseqgaiiFebDRAFT_100533011All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1747Open in IMG/M
3300000579|AP72_2010_repI_A01DRAFT_1029987All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria787Open in IMG/M
3300000580|AF_2010_repII_A01DRAFT_1010933All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1463Open in IMG/M
3300000580|AF_2010_repII_A01DRAFT_1059836All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria582Open in IMG/M
3300000655|AF_2010_repII_A100DRAFT_1025513All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium1104Open in IMG/M
3300000793|AF_2010_repII_A001DRAFT_10046114All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales983Open in IMG/M
3300001686|C688J18823_10078242All Organisms → cellular organisms → Bacteria2294Open in IMG/M
3300004463|Ga0063356_100837254All Organisms → cellular organisms → Bacteria1289Open in IMG/M
3300005328|Ga0070676_10155005All Organisms → cellular organisms → Bacteria1469Open in IMG/M
3300005332|Ga0066388_106222800All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria602Open in IMG/M
3300005363|Ga0008090_10013553All Organisms → cellular organisms → Bacteria → Proteobacteria1042Open in IMG/M
3300005363|Ga0008090_10057258All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300005436|Ga0070713_102424209All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria507Open in IMG/M
3300005547|Ga0070693_100776937All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300005549|Ga0070704_100568272Not Available993Open in IMG/M
3300005559|Ga0066700_10639887All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium737Open in IMG/M
3300005617|Ga0068859_100839776Not Available1005Open in IMG/M
3300005713|Ga0066905_100738542All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300005764|Ga0066903_104139557All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae776Open in IMG/M
3300005764|Ga0066903_105135704All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium693Open in IMG/M
3300005764|Ga0066903_108180510All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria535Open in IMG/M
3300005764|Ga0066903_108418388All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria526Open in IMG/M
3300005764|Ga0066903_108498286All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria523Open in IMG/M
3300005840|Ga0068870_10221804All Organisms → cellular organisms → Bacteria1158Open in IMG/M
3300005983|Ga0081540_1003119All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria13273Open in IMG/M
3300006177|Ga0075362_10278801All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300006844|Ga0075428_100032224All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5788Open in IMG/M
3300006847|Ga0075431_101787506All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria571Open in IMG/M
3300006854|Ga0075425_100475063All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1440Open in IMG/M
3300006969|Ga0075419_10422874Not Available916Open in IMG/M
3300009011|Ga0105251_10174514All Organisms → cellular organisms → Bacteria968Open in IMG/M
3300009147|Ga0114129_13375734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria514Open in IMG/M
3300009162|Ga0075423_10849100All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium967Open in IMG/M
3300009840|Ga0126313_10694233All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300009840|Ga0126313_11710093All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria525Open in IMG/M
3300010046|Ga0126384_10561772All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae993Open in IMG/M
3300010047|Ga0126382_11714088All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300010048|Ga0126373_12704072All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria554Open in IMG/M
3300010361|Ga0126378_11843670All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300010361|Ga0126378_12874741All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300010361|Ga0126378_13020962All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria536Open in IMG/M
3300010366|Ga0126379_10891986All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. JGI PP 4-B12991Open in IMG/M
3300010366|Ga0126379_13516615All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300010373|Ga0134128_10654144Not Available1168Open in IMG/M
3300010375|Ga0105239_11914947Not Available688Open in IMG/M
3300010396|Ga0134126_12413328Not Available572Open in IMG/M
3300010398|Ga0126383_13000222All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300011107|Ga0151490_1729884All Organisms → cellular organisms → Bacteria986Open in IMG/M
3300012198|Ga0137364_10558978All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium861Open in IMG/M
3300012200|Ga0137382_10368557All Organisms → cellular organisms → Bacteria → Proteobacteria1009Open in IMG/M
3300012205|Ga0137362_11506754All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300012207|Ga0137381_11724453All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria516Open in IMG/M
3300012930|Ga0137407_11449003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria653Open in IMG/M
3300012961|Ga0164302_10111677All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1535Open in IMG/M
3300012985|Ga0164308_11293197All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300012986|Ga0164304_11379948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria578Open in IMG/M
3300014968|Ga0157379_11019225All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300014969|Ga0157376_13101031All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria503Open in IMG/M
3300016371|Ga0182034_10273803All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1342Open in IMG/M
3300016422|Ga0182039_10013039All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria4900Open in IMG/M
3300019873|Ga0193700_1005739All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1916Open in IMG/M
3300019875|Ga0193701_1110120All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria504Open in IMG/M
3300020582|Ga0210395_10680320All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300021478|Ga0210402_11664330Not Available565Open in IMG/M
3300021560|Ga0126371_10608873All Organisms → cellular organisms → Bacteria1241Open in IMG/M
3300022726|Ga0242654_10383866Not Available536Open in IMG/M
3300022756|Ga0222622_10963383All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria626Open in IMG/M
3300025910|Ga0207684_11041959All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria683Open in IMG/M
3300025929|Ga0207664_10410788All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1205Open in IMG/M
3300025931|Ga0207644_10583328All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300025937|Ga0207669_11256015All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300026121|Ga0207683_10041900All Organisms → cellular organisms → Bacteria3998Open in IMG/M
3300026309|Ga0209055_1238742All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria560Open in IMG/M
3300027605|Ga0209329_1117032All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria585Open in IMG/M
3300027663|Ga0208990_1050817All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. NRK181244Open in IMG/M
3300027671|Ga0209588_1084042All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium1027Open in IMG/M
3300027853|Ga0209274_10069612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1698Open in IMG/M
3300027882|Ga0209590_10116735All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1617Open in IMG/M
3300027894|Ga0209068_10840838All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria542Open in IMG/M
3300028715|Ga0307313_10017023All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1934Open in IMG/M
3300028782|Ga0307306_10170030All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300028787|Ga0307323_10309088All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria568Open in IMG/M
3300028790|Ga0307283_10017709All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1465Open in IMG/M
3300028828|Ga0307312_10017702All Organisms → cellular organisms → Bacteria → Proteobacteria4027Open in IMG/M
3300031545|Ga0318541_10805258All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria524Open in IMG/M
3300031680|Ga0318574_10870835All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria528Open in IMG/M
3300031723|Ga0318493_10019221All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2977Open in IMG/M
3300031768|Ga0318509_10860335All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria501Open in IMG/M
3300031771|Ga0318546_10197572All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1372Open in IMG/M
3300031833|Ga0310917_10267966All Organisms → cellular organisms → Bacteria1151Open in IMG/M
3300031946|Ga0310910_10067343All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2574Open in IMG/M
3300031954|Ga0306926_10422003All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1645Open in IMG/M
3300032000|Ga0310903_10040698All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1730Open in IMG/M
3300032001|Ga0306922_10377047All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1520Open in IMG/M
3300032035|Ga0310911_10166083All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1246Open in IMG/M
3300032055|Ga0318575_10470391All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria638Open in IMG/M
3300032066|Ga0318514_10139477All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300032076|Ga0306924_11951683All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria607Open in IMG/M
3300032089|Ga0318525_10359273All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300032090|Ga0318518_10014227All Organisms → cellular organisms → Bacteria3378Open in IMG/M
3300032174|Ga0307470_10043351All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2246Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil14.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.90%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.93%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil6.93%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.94%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil4.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.95%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.97%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.98%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.98%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.98%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil1.98%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.99%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.99%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.99%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.99%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.99%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.99%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000579Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01EnvironmentalOpen in IMG/M
3300000580Forest soil microbial communities from Amazon forest - 2010 replicate II A01EnvironmentalOpen in IMG/M
3300000655Forest soil microbial communities from Amazon forest - 2010 replicate II A100EnvironmentalOpen in IMG/M
3300000793Forest soil microbial communities from Amazon forest - 2010 replicate II A001EnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006177Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300019875Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2EnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026309Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027663Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028715Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028790Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031680Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032055Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
INPhiseqgaiiFebDRAFT_10053301133300000364SoilVISERDRQILEQLPGWNPAEDIAAQRRAWEELAVAYNQDLPAIGGLEENVELRPGLCTDVAVPMGAGRHPVAIYLHG
AP72_2010_repI_A01DRAFT_102998713300000579Forest SoilASGKIRPMISEHDRQILSQLPVWDPTGDTVAQRRAWEELATVYNQDLPAIGGLEKNVELRTT*
AF_2010_repII_A01DRAFT_101093313300000580Forest SoilMISEHDRQILSQLPVWDPTGDVVAQRRAWEELATVYNQDLPAIGGLEKNVELRTT*
AF_2010_repII_A01DRAFT_105983623300000580Forest SoilEHDRQILSQLPAWNPTGDVVAQRRAWEELATVYNQDLPTIGGLYGLTRCHRQQ*
AF_2010_repII_A100DRAFT_102551333300000655Forest SoilMISEHDRQILSQLPVWNPTGDAVAQRRAWEELATVYNQDLPAIGGLEQN
AF_2010_repII_A001DRAFT_1004611423300000793Forest SoilMISEHDRQILSQLPAWNPTGDVVAQRRAWEELATVYNQDLPTIGGLYSLTRCHRQQ*
C688J18823_1007824253300001686SoilMISEHDRQILSRLPGWNPAGDMVAQRRAWEELAVVYNQDLPAIGALEENVELR
Ga0063356_10083725423300004463Arabidopsis Thaliana RhizosphereMISEHDRQILSRLPGWNPAGDIVAQRRAWEELAVVYNQDLPAIGALEEKVELRAGL
Ga0070676_1015500513300005328Miscanthus RhizosphereMISEHDRQILSRLPGWNPAGDMVAQRRAWEELAVVYNQDLPAIGALEENVELRAGLRADV
Ga0066388_10622280023300005332Tropical Forest SoilMISEHDRQILSQLPVWDPTGDTVAQRRAWEELATVYNQDLPAIGGLEKNVELRTT*
Ga0008090_1001355333300005363Tropical Rainforest SoilMISEHDRQILSQLPVWDPTGGTVAQRRAWEELATVYNQDLPAIGGLEKNDELRTT*
Ga0008090_1005725813300005363Tropical Rainforest SoilMISEHDRQVLSRLPAWNPTGDVVAQRRAWEELATVYNQDLPAIGGLEQNVEL
Ga0070713_10242420913300005436Corn, Switchgrass And Miscanthus RhizosphereVISERDRQILEQLPGWNPAEDIAAQRRAWEELAVAYNQDLPAIGGLEENVELRPGLCTDVAVPMGASR
Ga0070693_10077693713300005547Corn, Switchgrass And Miscanthus RhizosphereMISEHDRQILSRLPGWNPAGDMVAQRRAWEELAVVYNQDLPTIGALEENVELRAGLHADIAVP
Ga0070704_10056827223300005549Corn, Switchgrass And Miscanthus RhizosphereMISEHDRQVLNRLPVWNPAGDIAAQRRAWEELATVYNQDLPAIGGFEK
Ga0066700_1063988713300005559SoilMISEHDRQILSQLPAWNPTGDIVAQRRAWEELATVYNHDLPAIGGLEQNVELR
Ga0068859_10083977613300005617Switchgrass RhizosphereMISEHDRQVLNRLPVWNPAGDIAAQRRAWEELAVVYNHDLPAIGGLEENVELRPGLC
Ga0066905_10073854213300005713Tropical Forest SoilMISERDRQLLAGMPGWNPTGDIAAQRRAWEELAVIYNDDLPAIGTLEKNVELRPGLRADIAVPKG
Ga0066903_10413955713300005764Tropical Forest SoilMITAHDREILKGLPEWNPTGDITAQRRAWEELATIYNQDLPAIGGFEKRIELRAGLTADV
Ga0066903_10513570423300005764Tropical Forest SoilMISEHDRQILARLPPWNPAGDIVAQRRAWEELAVVYNQDLPEIGAFEQNVELRAGLRA
Ga0066903_10818051013300005764Tropical Forest SoilMISEHDRQILSQLPVWNPTGDAVAQRRAWEELATVYNQDLPAIGGLEQNLELRPGLRADI
Ga0066903_10841838813300005764Tropical Forest SoilMISEHDRQILSQLPVWDPTGDVAAQRRAWEELATVYNQDLPAIGGLEKNVELRSGLRADIAV
Ga0066903_10849828613300005764Tropical Forest SoilMISERDRQLLAGMPGWNPTGDIAAQRRAWEELAVIYNDDLPAIGTLEKNVEL
Ga0068870_1022180423300005840Miscanthus RhizosphereMISEHDRQILSRLPGWNPTGDMVAQRRAWEELAVVYNQDLPAIGALEE
Ga0081540_100311913300005983Tabebuia Heterophylla RhizosphereMLSEHDRQVLSRLPAWNPTGDVVAQRRAWEELATVYNQDLPAIGGLEKD
Ga0075362_1027880123300006177Populus EndosphereMISEHDRQILSRLPAWNPAGDMVAQRRSWEELAVVYNQDLPAIGALEEHVELRAGL
Ga0075428_10003222413300006844Populus RhizosphereMISEHDRQFLTRLPVWNPAGDIAAQRRAWEELAKVFNHDLPSIGCLEE
Ga0075431_10178750623300006847Populus RhizosphereMISEHDRQVLSRLPAWNPTGDVVAQRRAWEELATVYNHDLPAIGDLEQSVELRAGLRADVAVP
Ga0075425_10047506333300006854Populus RhizosphereMISEHDRQILSQLPAWNHTGDIVAQRRAWEELATVYNHDLPAIGGLEQNVELRSGLR
Ga0075419_1042287423300006969Populus RhizosphereMISEHDRQILSRLPVWNPAGDIAAQRRAWEELAVVYNHDLPAIGGLEENVELRPGLCA
Ga0105251_1017451423300009011Switchgrass RhizosphereMISEHDRQILSRLPGWNPAGDMVAQRRAWEELAVVYNQDLPAIGALEENVELRAGLRADIAVPKRPGPH
Ga0114129_1337573423300009147Populus RhizosphereMISEHDREFLSQLPPWNPTGDVVAQRRAWEELATLYNHDLPAIGGLEQNVELRPGLRADIAVPKGAGR
Ga0075423_1084910013300009162Populus RhizosphereMISEHDRQVLSQLPAWNPTGDIVAQRRAWEELATVYNHDLPAIGGLEKNVELRS
Ga0126313_1069423313300009840Serpentine SoilMISEHDRQILSRLPGWNPAGDMVAQRRAWEELAVVYNQDLPAIGALEENVELRA
Ga0126313_1171009323300009840Serpentine SoilMISEHDRQFLTRLPVWNPTGDIAAQRRAWEELAEVFNRDLPAIGRLEENVELRPGLRADV
Ga0126384_1056177223300010046Tropical Forest SoilMISEHDRQVLSQLPAWNPTGDIVAQRRAWEELATVYNHDLPAIGGLEQNVELRPGRGCPRFC*
Ga0126382_1171408823300010047Tropical Forest SoilMISERDRQLLSQLPVWNPTGDVVAQRRAWEELATVYNQDLPAIGGLEENVE
Ga0126373_1270407213300010048Tropical Forest SoilMISEHDRQILSQLPVWDPTGDVVAQRRAWEELATVYNQDLPAIGGLEKNVELRSGLRADIAVPKGA
Ga0126378_1184367023300010361Tropical Forest SoilMISERDRQILSQLPVWNPTGDAVAQRRAWEELATVYNQDLPAIGGLEQ
Ga0126378_1287474113300010361Tropical Forest SoilMITEHDRQILSQLPVWNPTGDVVAQRRAWEELATVYNQDLPAIGGLEQNVE
Ga0126378_1302096213300010361Tropical Forest SoilMISEHDRQILSQLPAWNPTGDIVAQRHAWEELATVYNQDLPAIGDLEQNVELRS
Ga0126379_1089198613300010366Tropical Forest SoilMISEHDRQILAGLPVWNPAGDIVAQRRAWEELAKVYNRDLPAIGDLQKNIELRAGLRADVAIPKGAGPHPV
Ga0126379_1351661523300010366Tropical Forest SoilMISEHDRQLLSRLPVWNPTGDVVAQRRAWEELATVYNQDLPAIGDLE
Ga0134128_1065414413300010373Terrestrial SoilMITAHDRDILKRLPEWNPTGDITAQRRAWEELATIYNQDLPAIGGFEKRIELRAGLTADIAVPK
Ga0105239_1191494723300010375Corn RhizosphereMISEHDRQVLNRLPVWNPAGDIAAQRRAWEELAVVYNHDLPAIGGLEENVELRPGLCA
Ga0134126_1241332813300010396Terrestrial SoilMISEHDRQVLNRLPVWNPAGDIAAQRRAWEELAVVYKHDLPAIGGLEAGRRERAEQHGRG
Ga0126383_1300022213300010398Tropical Forest SoilMISEHDRQLLSRLPVWNPTGDVVAQRRAWEELATVYNQDLPAIGDLEQNVELR
Ga0151490_172988413300011107SoilMISEHDRQILSRLPGWNPTGDMVAQRRAWEELAVVYNQDLPAIGALEEKVELRGGL
Ga0137364_1055897823300012198Vadose Zone SoilMISEHDRQVLSRLPAWNPTGDVVAQRRAWEELATVYNHDLPAIGDLEQNVEL
Ga0137382_1036855713300012200Vadose Zone SoilMISAHDREILSRLPEWNPTGDIAAQRREWEELATVYNHDLPAIGGFEK
Ga0137362_1150675423300012205Vadose Zone SoilMISEHDRQVLSRLPAWNPSGDVVAQRRAWEELATVYNHDLPAIGGLEQN
Ga0137381_1172445313300012207Vadose Zone SoilMISEHDRQVLSQLPAWNPTGDIVAQRRAWEELATVYNHDLPAIGRLEQNVELRSGLRADV
Ga0137407_1144900313300012930Vadose Zone SoilMISEHDRQVLSRLPAWNPTGDVVAQRRAWEELATVYNQDLPAIGGLEQNVELRPGLRADIAVPKGADRH
Ga0164302_1011167713300012961SoilMISERDRQILEQLPGWNPAEDIAAQRRAWEELAVAYNQDLPAIGGLEENVELCPGLCTDVAVPMGGVTAGIARRVESKSYAPGSNGKQ
Ga0164308_1129319713300012985SoilMISEHDRQILSRLPGWNPAGDMVAQRRAWEELAVVYNQDLPAIGALEENVEL
Ga0164304_1137994813300012986SoilMISERDRQILEQLPGWNPAEDIAAQRRAWEELAVAYNQDLPAIGGLEENVELCPGLCTDVAVPMGGVTAGIAR
Ga0157379_1101922513300014968Switchgrass RhizosphereMISAHDRQILSQLPGWNPAGDMVAQRRAWEELAVVYNQDPPAIGALEENIDLRAGLR
Ga0157376_1310103113300014969Miscanthus RhizosphereMISEHDRQILSQLPGWNPAGDMVAQRRAWEELAVVYNQDLPAIGALEENVEL
Ga0182034_1027380323300016371SoilMISEHDRQVLDRTPSWDPRGDIAEQRRAWENLAIGYNQDRPAIGALEQNVELRPGLRADVAV
Ga0182039_1001303913300016422SoilMISEHDRQVLSSLPVWNPAGDIAAQRLAWEELAGIFNRDLPAIGDLHKNIELRAGLRAD
Ga0193700_100573943300019873SoilMISEHDRQVLSRLPVWNPAGDIAAQRRAWEELAIAYNEDLPAIGGLEE
Ga0193701_111012013300019875SoilMISQHDREILSRLPEWNPTGDITAQRRAWEELAVVYNQDLPAIGGLEKRIELRAGLTADV
Ga0210395_1068032023300020582SoilMISEHDRRILETLPAWNPPTDIRAQRVAWEKLAAGYNLDLPAIGALEEKVD
Ga0210402_1166433013300021478SoilMITAHDRDILKRLPEWNPTGDITAQRRAWEELATIYNQDLPANGGFEKRIELRAGLTADI
Ga0126371_1060887333300021560Tropical Forest SoilMISEHDRQILSQLPVWDPTGDTVAQRRAWEELATVYNQDLPAIGGLEKNVELRTT
Ga0242654_1038386613300022726SoilMITAHDRDILKRLPEWNPTGDITAQRRAWEELATIYNQDLPAIGGFEKR
Ga0222622_1096338323300022756Groundwater SedimentMISEHDRQVLSRLPVWNPAGDIAAQRRAWEELAIVYNEDLPAIGGLEENVELRAGLCAD
Ga0207684_1104195913300025910Corn, Switchgrass And Miscanthus RhizosphereMISEHDRQVLSRLPAWNPTGDVVAQRRAWEELATVYNHDLPAIGDLEQN
Ga0207664_1041078813300025929Agricultural SoilMITAHDRDILKRLPEWNPTGDITAQRRAWEELATIYNQDLPAIGGFEKRVDLRAGLTADVAV
Ga0207644_1058332813300025931Switchgrass RhizosphereMISAHDRQILSQLPGWNPAGDMVAQRRAWEELAVVYNQDLPAIGALEENVELR
Ga0207669_1125601513300025937Miscanthus RhizosphereMISAHDRQILSQLPGWNPAGDMVAQRRAWEELAVVYNQDLPAIGALEENV
Ga0207683_1004190013300026121Miscanthus RhizosphereMISEHDRQILSRLPGWNPTGDMVAQRRAWEELAVVYNQDLPAIGALEEK
Ga0209055_123874213300026309SoilMISEHDRQVLSQLPAWNPTGDIVAQRRAWEELATVYNRDLPAIGGLEQNVELRSGLRADV
Ga0209329_111703223300027605Forest SoilMISEHDRQILSQLPAWNPTGDIVAQRRAWEELATVYNHELPTIGGLEQNVE
Ga0208990_105081723300027663Forest SoilMISERDRQVLERLPGWNPAGDIAAQRRAWEELAVVYNHDLPAIGALKEN
Ga0209588_108404213300027671Vadose Zone SoilMISEHDRQILSQLPAWNPTGDIVAQRRAWEELATVYNHDLPAIGGLEQN
Ga0209274_1006961213300027853SoilMISEHDRRILETLPTWNPTGDISAQRVAWEKLAAVYNLDLPAIGALEA
Ga0209590_1011673513300027882Vadose Zone SoilMISEHDRQILSQLPAWNPTGDIVAQRRAWEELATVYNHDLPAIGGLEQNVELRSGLRADVAVP
Ga0209068_1084083813300027894WatershedsVISERDRQILEQLPGWNPAEDIAAQRRAWEELAVAYNQDLPAIGGLEENVELRPGLCTDV
Ga0307313_1001702313300028715SoilMISEHDRQVLSRLPVWNPAGDIAAQRRAWEELAIVYNEDLPAIGGLEEN
Ga0307306_1017003023300028782SoilMISEHDRQILSRLPGWNPTGDMVAQRRAWEELAVVYNQDLPAIGALEENVELRAGLRADV
Ga0307323_1030908813300028787SoilVISERDRQILEQLPGWNPAEDIAAQRRAWEELAVAYNQDLPAIGGLEENVE
Ga0307283_1001770913300028790SoilMISEHDRQILSRLPVWNPAGDIAAQRRAWEELAIVYNEDLPAIGGLEQNVEL
Ga0307312_1001770213300028828SoilMISEHDRQVLSRLPVWNPAGDIAAQRRAWEELAIVYNEDLPAIGGLEENVELR
Ga0318541_1080525823300031545SoilMISEHDRQILSQLPAWNPTGDIVAQRRAWEELATVYNRDLPAIGGLEQNVELRSGLRA
Ga0318574_1087083523300031680SoilMISEHDRQVLSQLPVWNPTGDAVAQRRAWEELATVYNQDLPAIGGLEQNVQLRPGLCADIAVPKG
Ga0318493_1001922113300031723SoilMISEHDRQILSRLPVWNPTGDVVAQRRAWEELATVYNQDLPVIGSLEQNVELRRGLRADVAVPNG
Ga0318509_1086033513300031768SoilMISEHDRQILSQLPAWNPTGDIVAQRRAWEELATVYNRDLPAIGGLEQNVELRSGLRADV
Ga0318546_1019757233300031771SoilMISEHDRQILSRLPVWNPTGDVVAQRRAWEELATVYNQDLPVIGSLEQNVELRRGLRADVAVP
Ga0310917_1026796613300031833SoilMISEHDRQILSQLPVWDPTGDIVAQRRAWEELATVYNQDLPAIGGLEKKVE
Ga0310910_1006734343300031946SoilMISEHDRQILSQLPAWNPTGDIVAQRRAWEELATVYNRDLPAIGGLEQNVELRSGLRADVAVP
Ga0306926_1042200323300031954SoilMISEHDRQVLQGLPSWNPVGDIAAQRRAWEELAVTYNQDLPTIGALEENVALRPDLRADVAVPLGAGPHP
Ga0310903_1004069833300032000SoilMISEHDRQILSRLPGWNPTGDMVAQRRAWEELAVVYNQDLPAIGALEENVELRAG
Ga0306922_1037704713300032001SoilMISEHDRQILSQLPVWDPTGDIVAQRRAWEELATVYNQDLPAIGGLEKNVELRSGLR
Ga0310911_1016608313300032035SoilMISEHDRQVLSQLPVWNPTGDAVAQRRAWEELATVYNQDLPAIGGLEQNVQLRPGLCA
Ga0318575_1047039123300032055SoilMISEHDRQVLSSLPVWNPAGDIAAQRLAWEELAGIFNRDLPAIGDLHKNIELRAGLRADVAVPE
Ga0318514_1013947713300032066SoilMISEHDRQILSQLPVWDPTGDIVAQRRAWEELATVYNQDLPAIGGLEKNVELRSGLRADVAV
Ga0306924_1195168313300032076SoilMISEHDRQVLQGLPSWNPVGDIAAQRRAWEELAVTYNQDLPTIGALEENVALRP
Ga0318525_1035927313300032089SoilMISEHDRQILSQLPVRDPTGDIVAQRRAWEELATVYNQDLPAIGGLEKNVELRSGLR
Ga0318518_1001422763300032090SoilMISEHDRQVLSSLPVWNPAGDIAAQRLAWEELAGIFNRDLPAIGDLHKNIELRAGLRA
Ga0307470_1004335113300032174Hardwood Forest SoilMITAHDRDILKRLPEWNPTGDITAQRRAWEELATIYNQDLPAIGGFEKRIELRAASP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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