Metagenome / Metatranscriptome Family F103609

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103609
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	41 residues
Representative Sequence	TNNDGLWILRYNRPALLEPAKKKPPCDSNAEIMAMPPDCD
Number of Associated Samples	91
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.01 %
% of genes from short scaffolds (< 2000 bps)	93.07 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.19

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.455 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.842 % of family members)
Environment Ontology (ENVO)	Unclassified (38.614 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.297 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.19
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.19
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF14534	DUF4440	20.79
PF12849	PBP_like_2	3.96
PF10647	Gmad1	0.99
PF00501	AMP-binding	0.99
PF02517	Rce1-like	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.99
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.46 %
Unclassified	root	N/A	45.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.46 %
Unclassified	root	N/A	45.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.46 %
Unclassified	root	N/A	45.54 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.50 %
Unclassified	root	N/A	45.54 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	48.51 %
Unclassified	root	N/A	45.54 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.51 %
Unclassified	root	N/A	45.54 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.51 %
Unclassified	root	N/A	45.54 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.51 %
Unclassified	root	N/A	45.54 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.51 %
Unclassified	root	N/A	45.54 %
Crocinitomicaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.51 %
Unclassified	root	N/A	45.54 %
unclassified Crocinitomicaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.51 %
Unclassified	root	N/A	45.54 %
Crocinitomicaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001131\|JGI12631J13338_1017324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	803	Open in IMG/M
3300002245\|JGIcombinedJ26739_101790257	Not Available	515	Open in IMG/M
3300003368\|JGI26340J50214_10047419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1202	Open in IMG/M
3300004080\|Ga0062385_10643911	Not Available	676	Open in IMG/M
3300004119\|Ga0058887_1270671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	795	Open in IMG/M
3300004152\|Ga0062386_100322703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1234	Open in IMG/M
3300004152\|Ga0062386_101550638	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300004464\|Ga0068983_141149	Not Available	532	Open in IMG/M
3300004476\|Ga0068966_1391105	Not Available	528	Open in IMG/M
3300004598\|Ga0068975_1149770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300004613\|Ga0068937_1245267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300004966\|Ga0072328_1160053	Not Available	556	Open in IMG/M
3300004972\|Ga0072325_1225170	Not Available	518	Open in IMG/M
3300005591\|Ga0070761_10353406	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300005610\|Ga0070763_10263870	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	937	Open in IMG/M
3300005610\|Ga0070763_10511897	Not Available	688	Open in IMG/M
3300005712\|Ga0070764_10875187	Not Available	562	Open in IMG/M
3300005921\|Ga0070766_10595419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300006176\|Ga0070765_100570945	Not Available	1066	Open in IMG/M
3300009523\|Ga0116221_1072608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1552	Open in IMG/M
3300009524\|Ga0116225_1207975	Not Available	883	Open in IMG/M
3300009552\|Ga0116138_1230736	Not Available	512	Open in IMG/M
3300009631\|Ga0116115_1080221	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300009636\|Ga0116112_1025335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1945	Open in IMG/M
3300009665\|Ga0116135_1103061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300009700\|Ga0116217_10951917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300009759\|Ga0116101_1058849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300011052\|Ga0138585_171764	Not Available	544	Open in IMG/M
3300011064\|Ga0138525_1087922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300011078\|Ga0138565_1089399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300011086\|Ga0138564_1149207	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	562	Open in IMG/M
3300011110\|Ga0138578_1203168	Not Available	651	Open in IMG/M
3300011120\|Ga0150983_10819682	Not Available	556	Open in IMG/M
3300011120\|Ga0150983_15946903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300011120\|Ga0150983_16372622	Not Available	551	Open in IMG/M
3300014161\|Ga0181529_10738034	Not Available	506	Open in IMG/M
3300014168\|Ga0181534_10875655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	535	Open in IMG/M
3300017823\|Ga0187818_10043473	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1929	Open in IMG/M
3300017933\|Ga0187801_10307407	Not Available	646	Open in IMG/M
3300017942\|Ga0187808_10267119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	767	Open in IMG/M
3300017955\|Ga0187817_10997843	Not Available	536	Open in IMG/M
3300017955\|Ga0187817_11108594	Not Available	508	Open in IMG/M
3300017966\|Ga0187776_10484711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300017972\|Ga0187781_10423527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300017996\|Ga0187891_1078167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1300	Open in IMG/M
3300018001\|Ga0187815_10081209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1363	Open in IMG/M
3300018026\|Ga0187857_10148792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300018040\|Ga0187862_10648508	Not Available	621	Open in IMG/M
3300018042\|Ga0187871_10268847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300018057\|Ga0187858_10140795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1613	Open in IMG/M
3300018085\|Ga0187772_10010251	All Organisms → cellular organisms → Bacteria	5064	Open in IMG/M
3300018085\|Ga0187772_10393561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300018085\|Ga0187772_10759538	Not Available	698	Open in IMG/M
3300018086\|Ga0187769_10422547	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Crocinitomicaceae → unclassified Crocinitomicaceae → Crocinitomicaceae bacterium	1003	Open in IMG/M
3300019166\|Ga0184595_107547	Not Available	535	Open in IMG/M
3300019166\|Ga0184595_117269	Not Available	531	Open in IMG/M
3300019183\|Ga0184601_123335	Not Available	533	Open in IMG/M
3300019258\|Ga0181504_1137861	Not Available	606	Open in IMG/M
3300019275\|Ga0187798_1332727	Not Available	507	Open in IMG/M
3300019278\|Ga0187800_1427501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300019284\|Ga0187797_1830999	Not Available	518	Open in IMG/M
3300020580\|Ga0210403_10168400	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1795	Open in IMG/M
3300020582\|Ga0210395_11413315	Not Available	507	Open in IMG/M
3300021180\|Ga0210396_10959016	Not Available	726	Open in IMG/M
3300021402\|Ga0210385_11500366	Not Available	515	Open in IMG/M
3300021405\|Ga0210387_11089730	Not Available	697	Open in IMG/M
3300021475\|Ga0210392_10219912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1334	Open in IMG/M
3300021479\|Ga0210410_10627150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300021559\|Ga0210409_11408391	Not Available	573	Open in IMG/M
3300022504\|Ga0242642_1055793	Not Available	624	Open in IMG/M
3300022509\|Ga0242649_1078092	Not Available	506	Open in IMG/M
3300022528\|Ga0242669_1138084	Not Available	502	Open in IMG/M
3300022533\|Ga0242662_10332469	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300022711\|Ga0242674_1038322	Not Available	625	Open in IMG/M
3300022716\|Ga0242673_1136893	Not Available	504	Open in IMG/M
3300022717\|Ga0242661_1151514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300023660\|Ga0247550_105234	Not Available	507	Open in IMG/M
3300025459\|Ga0208689_1023407	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1618	Open in IMG/M
3300027660\|Ga0209736_1211674	Not Available	501	Open in IMG/M
3300027854\|Ga0209517_10416767	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300027855\|Ga0209693_10050441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2047	Open in IMG/M
3300027889\|Ga0209380_10046343	All Organisms → cellular organisms → Bacteria	2466	Open in IMG/M
3300027889\|Ga0209380_10285742	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	969	Open in IMG/M
3300027895\|Ga0209624_10607332	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300027986\|Ga0209168_10194857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300028863\|Ga0302218_10144309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300029939\|Ga0311328_10112553	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2246	Open in IMG/M
3300029943\|Ga0311340_11534788	Not Available	520	Open in IMG/M
3300030007\|Ga0311338_10735184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300030058\|Ga0302179_10514319	Not Available	525	Open in IMG/M
3300030490\|Ga0302184_10159563	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300030743\|Ga0265461_13627585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300030815\|Ga0265746_1037779	Not Available	641	Open in IMG/M
3300031128\|Ga0170823_15082435	Not Available	556	Open in IMG/M
3300031708\|Ga0310686_104455438	All Organisms → cellular organisms → Bacteria → Acidobacteria	6882	Open in IMG/M
3300031708\|Ga0310686_114993989	Not Available	643	Open in IMG/M
3300031715\|Ga0307476_10032790	All Organisms → cellular organisms → Bacteria → Acidobacteria	3462	Open in IMG/M
3300031890\|Ga0306925_12002960	Not Available	546	Open in IMG/M
3300032119\|Ga0316051_1028260	Not Available	543	Open in IMG/M
3300033158\|Ga0335077_10149155	All Organisms → cellular organisms → Bacteria	2685	Open in IMG/M
3300033405\|Ga0326727_10702629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.24%
Aquatic	Environmental → Aquatic	23.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.31%
Freshwater	Environmental → Aquatic → Freshwater	23.76%
Peat	Environmental → Terrestrial → Peat	6.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.57%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	23.76%
Loam	Environmental → Terrestrial → Soil → Loam	16.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.76%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.83%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	11.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.84%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	14.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	8.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.92%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.94%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.94%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.94%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.94%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.95%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.96%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.98%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.99%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.99%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001131	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004464	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 81 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004476	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004598	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 72 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004613	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 25 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004966	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 66 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004972	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 42 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009631	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300011052	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 75 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011064	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 2 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011078	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 50 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011086	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 49 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011110	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 65 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019166	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019183	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZA1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019258	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019284	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022509	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022711	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022716	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023660	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025459	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300030743	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032119	Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12631J13338_10173243	3300001131	Forest Soil	FLTNNEGLWVLRYVRPALLEPAKQKKPCGSEAEIQAMPPDCD*
JGIcombinedJ26739_1017902573	3300002245	Forest Soil	LTNNEGLWVLRYSRPALLEPAKKKRPCDSETEIMAMPPDCD*
JGI26340J50214_100474193	3300003368	Bog Forest Soil	NNDGLWILRYQHPSRFEPAKKKPPCDSEAEIQAMPPDCQ*
Ga0062385_106439112	3300004080	Bog Forest Soil	DGYHGLIYLTNNEGLWILRYNRSATLEPSKQKPPCDSASAIMAMPPDCD*
Ga0058887_12706713	3300004119	Forest Soil	YLTNNEGLWVLRYSRPALLEPAKKKRPCDSETEIMAMPPDCD*
Ga0062386_1003227031	3300004152	Bog Forest Soil	LIYLTNNEGLWILRYNRPAPLEPARKKPPCDSESAIMAMPPDCD*
Ga0062386_1015506382	3300004152	Bog Forest Soil	IYLTNNEGLWILRYTRPALLEPAKKKRPCDSESEIEAMPPECD*
Ga0068983_1411491	3300004464	Peatlands Soil	NNDGLYVLRYNHPSRFEPAKTKPPCTSESEIQAMPPDCQ*
Ga0068966_13911052	3300004476	Peatlands Soil	TNNEGLWILRYSHPSLLEPAKKKPPCDSNSEIMSMPPDCD*
Ga0068975_11497702	3300004598	Peatlands Soil	GLIYLTNNEGLWILRYTRPPLLEPAKKKRPCDSESEIEAMPPECD*
Ga0068937_12452672	3300004613	Peatlands Soil	IYLTNNEGLWILRYNRPALLEPAKKKRPCDSNSDLMAMPPDCD*
Ga0072328_11600533	3300004966	Peatlands Soil	HGLIYLTNNDGLYVLRYNHPSRFEPAKTKPPCTSESEIQAMPPDCQ*
Ga0072325_12251702	3300004972	Peatlands Soil	NNEGLWILRYNRPALLEPAKKKRPCDSESAIMSMPPECD*
Ga0070761_103534061	3300005591	Soil	TNNDGLWILRYNRPALLEPAKKKPPCDSNAEIMAMPPDCD*
Ga0070763_102638701	3300005610	Soil	IYLTNNEGLWILRYNRPPLLEPAKKKPPCDSESQIMAMPPDCD*
Ga0070763_105118971	3300005610	Soil	LLPDSHRGLIFLTNNEGLWVLRYIRPALLEPAKQKKPCSSEADIQAMPPDCD*
Ga0070764_108751872	3300005712	Soil	IFLTNNDGLWILRYNRPALLEPAKKKPPCDSNSEIMAMPPDCD*
Ga0070766_105954191	3300005921	Soil	GLIYLTNNEGLWVLRYSRPALLEPAKKKRPCDSETEIMAMPPDCD*
Ga0070765_1005709453	3300006176	Soil	EGLWILRYNRPSLLEPAKKKPPCDSNAEIMSMPPDCD*
Ga0116221_10726085	3300009523	Peatlands Soil	WILRYNRPSMLEPVKKKPPCDSNSAIMAMPPDCD*
Ga0116225_12079751	3300009524	Peatlands Soil	VTKNGGLWILRYSPPSLREPRKKKPPCDSNYEIMSMPPDCD*
Ga0116138_12307362	3300009552	Peatland	LIYLTNNDGLYILRYEHPSRFEPAKKKPPCDSEAEIQAMPPDCQ*
Ga0116115_10802211	3300009631	Peatland	GLIYLTNNDGLWILRYDHPSRFEPAKKKPPCDSESEIMAMPPDCD*
Ga0116112_10253351	3300009636	Peatland	GLWILRYNRPLRLEPAKKKPPCDSESAIMAMPPDCD*
Ga0116135_11030611	3300009665	Peatland	LPDSHRGLIFLTNNEGLWVLRYIRPALLEPAKQKKPCGSEADIQAMPPDCD*
Ga0116217_109519171	3300009700	Peatlands Soil	LIYLANNEGLWILRYSRAALLEPAKKKRPCDSETEIMAMPPDCD*
Ga0116101_10588493	3300009759	Peatland	EGLWVLRYNRPALLEPAKQKKPCSSESDIQAMPPDCD*
Ga0138585_1717642	3300011052	Peatlands Soil	LTNNEGLWILRYNRPSMLEPAKKKPPCDSNSAIMAMPPDCD*
Ga0138525_10879222	3300011064	Peatlands Soil	LIYLTNNEGLWILRYTRPPLLEPAKKKRPCDSESEIEAMPPECD*
Ga0138565_10893992	3300011078	Peatlands Soil	HGLIYLTNNEGLWILRYTRPPLLEPAKKKRPCDSESEIEAMPPECD*
Ga0138564_11492071	3300011086	Peatlands Soil	GLIYLTNNEGLWILRYNRPARLEPAKKKQPCDSESAIMAMPPDCD*
Ga0138578_12031682	3300011110	Peatlands Soil	WILRYNRPSMLEPAKKKPPCDSNSAIMAMPPDCD*
Ga0150983_108196821	3300011120	Forest Soil	LTNNEGLWILRYNHPSLLEPAKKKPPCDSNSEIMAMPPDYA*
Ga0150983_159469032	3300011120	Forest Soil	LIYLTNNEGLWILRYNRPPLLEPAKKKPPCDSESQIMAMPPDCD*
Ga0150983_163726222	3300011120	Forest Soil	WVLRYTRPALLEPAKKKRPCDSESEIEAMPPECD*
Ga0181529_107380341	3300014161	Bog	LTNNDGLWVLRYNRPAPLEPEKKKPLCDSNAEIMAMPPDCD*
Ga0181534_108756551	3300014168	Bog	HGLIYLTNNEGLWILRYNRPAPLEPAKKKPLCDSNAEIMAMPPDCD*
Ga0187818_100434731	3300017823	Freshwater Sediment	HGLIYLANTEGLWVLRYNRPALLEPAKKKPPCDSNSEIMAMPPDCD
Ga0187801_103074072	3300017933	Freshwater Sediment	LWILRYDRPSPLEPAKKKKPCDSESQIMAMPPDCD
Ga0187808_102671191	3300017942	Freshwater Sediment	NEGWWILRYSRPELLEPAKTKKPCDSESEIEAMPPECD
Ga0187817_109978432	3300017955	Freshwater Sediment	LWVLRYNHPSLLEPSKKKPPCDSNSEIMAMPPDCD
Ga0187817_111085941	3300017955	Freshwater Sediment	NNEGLWILRYDRPSPLEPAKKKKPCDSESQIMAMPPDCD
Ga0187776_104847113	3300017966	Tropical Peatland	LIYLTNNEGLWILRYKRLAMLEPARKKPPCDSYSAIMAMPPECE
Ga0187781_104235272	3300017972	Tropical Peatland	LIYLTNNDGLWILRYTRPPLLEPEKHKKPCDSESQIMAMPPDCD
Ga0187891_10781671	3300017996	Peatland	TNNEGLWILRYNRPSRLEPAKKKQPCDSESAIMAMPPDCD
Ga0187815_100812091	3300018001	Freshwater Sediment	TNNEGLWILRYNRPSMLEPARKKPPCDSESQIMAMPPDCD
Ga0187857_101487921	3300018026	Peatland	GLWVLRYNRPALLEPAKQKKPCSSESDIQAMPPDCD
Ga0187862_106485082	3300018040	Peatland	FLTNNEGLWVLRYNRPALLEPAKQKKPCSSESDIQAMPPDCD
Ga0187871_102688471	3300018042	Peatland	EGLWILRYNRPPLMEPARKKPACDSESAIMAMPPDCD
Ga0187858_101407951	3300018057	Peatland	NNEGLWILRYDRPSPLEPAKKKKPCDSETAIMAMPPDCD
Ga0187772_100102518	3300018085	Tropical Peatland	GHGLIYLTNDQGLWILRYNRPALLEPAKKKPPCTSESDIQAMPPDCD
Ga0187772_103935611	3300018085	Tropical Peatland	LWAPRYYRQPLLEPAKKKPPCDSESEIMAMPPDCD
Ga0187772_107595382	3300018085	Tropical Peatland	IYLTNSEGLWILRYTRPARLEPAKKKKPCDSNAILSAMPPDCD
Ga0187769_104225471	3300018086	Tropical Peatland	GLWILRYNRPAKLEPAKKKPPCDSNTEIMAMPPDCD
Ga0184595_1075471	3300019166	Soil	LTNNDGLWILRYNHPSRFEPAKKKPPCDSETEIQAMPPDCQ
Ga0184595_1172691	3300019166	Soil	LLPDSHRGLIFLTNNEGLWVLRYIRPALLEPAKHKKPCSSEADIQAMPPDCD
Ga0184601_1233351	3300019183	Soil	RGLIFLTNNEGLWVLRYIRPALLEPAKHKKPCSSEADIQAMPPDCD
Ga0181504_11378612	3300019258	Peatland	NNDGLYILRYNHPSRFEPAKKKPPCTSESEIQAMAPDCQ
Ga0187798_13327271	3300019275	Peatland	EGLWVLRYIRPARLEPAKKKPPCDSNAEIMAMPPDCD
Ga0187800_14275011	3300019278	Peatland	NDQGLWILRYSRPALLEPAKKKPPCDSESEIMAMPPDCD
Ga0187797_18309991	3300019284	Peatland	NDEGLWILKYNRQGRLDPAKKKPPCDSYSAIMSMPPDCD
Ga0210403_101684004	3300020580	Soil	GGHGLIYLTNNEGLWVLRYTRPALLEPAKKKRPCDSESEIESMPPECD
Ga0210395_114133151	3300020582	Soil	NNEGLWILRYTRPALLEPAKKKRPCDSESEIEAMPPECD
Ga0210396_109590162	3300021180	Soil	LVFLTNNEGLWILRYSHPSLLEPAKKKPPCDSNSEIAAMPPDCD
Ga0210385_115003662	3300021402	Soil	DDGLWILRYRHPWLFEPEKNKSPCTSESNIQAMPPDCQ
Ga0210387_110897301	3300021405	Soil	SLVFLTNNEGLWILRYSHPSLLEPAKKKPPCDSNSEIAAMPPDCD
Ga0210392_102199121	3300021475	Soil	FLTNNEGLWILRYSHPSLLEPAKKKPPCDSNSEIAAMPPDGD
Ga0210410_106271501	3300021479	Soil	IYLTNNEGLWILRYTRPALLEPAKKKRPCDSESEIEAMPPECD
Ga0210409_114083912	3300021559	Soil	LWILRYNHPSLLEPAKKKPPCDSNSEIMAMPPDCD
Ga0242642_10557932	3300022504	Soil	NEGLWILRYTRPALLEPAKKKRPCDSESEIEAMPPECD
Ga0242649_10780921	3300022509	Soil	NNEGLWILRYHRPAPLEPAKKKPPCDSNAEIMAMPPDCD
Ga0242669_11380841	3300022528	Soil	EGLWVLRYTRPALLEPAKKKRPCDSESEIESMPPECD
Ga0242662_103324691	3300022533	Soil	LIYLTNNEGLWILRYTRPALLEPAKKKRPCDSESEIEAMPPECD
Ga0242674_10383221	3300022711	Soil	NNEGLWVLRYTRPALLEPAKKKRPCDSESEIESMPPECD
Ga0242673_11368932	3300022716	Soil	TNNDGLWVLRYIRPALLEPAKKKPLCDSNAEIMAMPPECD
Ga0242661_11515141	3300022717	Soil	GLIYLTNNEGLWILRYSRAALLEPAKKKRPCDSESEIAAMPPDCD
Ga0247550_1052341	3300023660	Soil	LIFLTNNEGLWVLRYIRPALLEPAKHKKPCSSEADIQAMPPDCD
Ga0208689_10234071	3300025459	Peatland	LWILRYNRPLRLEPAKKKPPCDSESAIMAMPPDCD
Ga0209736_12116741	3300027660	Forest Soil	IYLTNNEGLWILRYNRPSLLEPSKKKVPCDSNSEISAMPPDCD
Ga0209517_104167673	3300027854	Peatlands Soil	LWILRYSRAALLEPAKKKKPCDSSSDISAMPPDCD
Ga0209693_100504414	3300027855	Soil	MYLTNNEGLWILRYHHPSLLEPAKKKPLCDSNSEIMAMPPDCD
Ga0209380_100463435	3300027889	Soil	GLWILRYNRPALLEPAKKKPPCDSNAEIMAMPPDCD
Ga0209380_102857421	3300027889	Soil	GLWILRYNRPALLEPAKKKPPCDSESAIMAMPPDCD
Ga0209624_106073321	3300027895	Forest Soil	GLIFLTNNEGLWVLRYIRPALLEPAKHKKPCSSEADIQAMPPDCD
Ga0209168_101948573	3300027986	Surface Soil	LIYLTNDEGLWILRYNHPSLLEPAKKKPPCDSNSEIMAMPPDCD
Ga0302218_101443093	3300028863	Palsa	GLWILRYTRPALLEPAKKKPPCDSESEIQAMPPDCQ
Ga0311328_101125531	3300029939	Bog	EGLWILRYNRPAPLEPTKKKPLCDSNAEIMAMPPDCD
Ga0311340_115347882	3300029943	Palsa	NSEGLWILRYNRPAPLEPARKKPPCDSESEIMAMPPDCD
Ga0311338_107351841	3300030007	Palsa	EGLWILRYNRPALLEPSKKKPPCDSESEIMAMPPDCD
Ga0302179_105143191	3300030058	Palsa	GLWILRYNRPALLEPSKKKPPCDSESEIMAMPPDCD
Ga0302184_101595633	3300030490	Palsa	NEGLWILRYNRPALFEPAKKKPLCDSNAEIMAMPPDCD
Ga0265461_136275851	3300030743	Soil	PDGGHGLIYLTNNEGLWILRYSRASLLEPAKKKRPCDSETEIMAMPPDCD
Ga0265746_10377791	3300030815	Soil	LIYLTNNDGLYILRYEHPSRLEPAKKKPPCDSEAEIQAMPPDCQ
Ga0170823_150824352	3300031128	Forest Soil	FYFYFSFIGLWILRYNHPSFLEPAKKKPPCDSNSEIMAMPPDCD
Ga0310686_1044554381	3300031708	Soil	LTNNDGLWILRYNRFSPLEPAKKKPLCDSESEIMAMPPDCE
Ga0310686_1149939891	3300031708	Soil	NNDGLWILRYNHPSLLEPAKKKPLCNSEAEIMAMPPDCQ
Ga0307476_100327906	3300031715	Hardwood Forest Soil	YLTNNEGLWVLRYSRASLLEPAKKKRPCDSETEIMAMPPDCD
Ga0306925_120029601	3300031890	Soil	NNEGLWILRYNRPALLEPARKKPACDSNAAIMAMPPECN
Ga0316051_10282602	3300032119	Soil	PDSHRGLIFLTNNEGLWVLRYIRPALLEPAKHKKPCSSEADIQAMPPDCD
Ga0335077_101491551	3300033158	Soil	TNSEGLWVLQYHRAGMLEPARKKPPCDSNAEIMAMPPDCD
Ga0326727_107026291	3300033405	Peat Soil	LIYLTNDDGLWVLRYNRPALLEPAKKKPPCDSESEIMAMPPDCD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103609

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences