NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F103628

Metagenome Family F103628

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103628
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 103 residues
Representative Sequence ELREIYGKSISSITVLLRHVLIALGEDVPADKSGVYQRIEELTGAPASVFELGRALRDNHAHSEITRAYGKYLEAVELVIHALDALVPKQEWQRVKKQKF
Number of Associated Samples 89
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.98 %
% of genes near scaffold ends (potentially truncated) 98.02 %
% of genes from short scaffolds (< 2000 bps) 95.05 %
Associated GOLD sequencing projects 86
AlphaFold2 3D model prediction Yes
3D model pTM-score0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(23.762 % of family members)
Environment Ontology (ENVO) Unclassified
(31.683 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(43.564 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 63.28%    β-sheet: 0.00%    Coil/Unstructured: 36.72%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.75
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
a.127.1.0: automated matchesd6s7ja_6s7j0.68418
a.24.16.2: Family 1 bi-partite nucleotidyltransferase subunitd1wtya_1wty0.67342
a.24.16.2: Family 1 bi-partite nucleotidyltransferase subunitd1joga_1jog0.66278
a.127.1.2: HAL/PAL-liked1w27a_1w270.64109
a.232.1.1: RNA-binding protein She2pd1xlya_1xly0.63868

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF04011LemA 80.20
PF00078RVT_1 2.97
PF00848Ring_hydroxyl_A 1.98
PF00072Response_reg 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG1704Magnetosome formation protein MamQ, lipoprotein antigen LemA familyCell wall/membrane/envelope biogenesis [M] 80.20
COG4638Phenylpropionate dioxygenase or related ring-hydroxylating dioxygenase, large terminal subunitInorganic ion transport and metabolism [P] 3.96

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459010|GIO7OMY01BHL99All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium541Open in IMG/M
2228664022|INPgaii200_c0877428All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium917Open in IMG/M
3300002917|JGI25616J43925_10194004All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium788Open in IMG/M
3300004479|Ga0062595_102214838All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium539Open in IMG/M
3300005167|Ga0066672_10742252All Organisms → cellular organisms → Bacteria → Acidobacteria624Open in IMG/M
3300005177|Ga0066690_10302388All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1081Open in IMG/M
3300005332|Ga0066388_102468517All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300005343|Ga0070687_101042702All Organisms → cellular organisms → Bacteria → Acidobacteria595Open in IMG/M
3300005434|Ga0070709_11676757All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter519Open in IMG/M
3300005437|Ga0070710_10735506All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae699Open in IMG/M
3300005437|Ga0070710_11022932All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae603Open in IMG/M
3300005439|Ga0070711_100297102All Organisms → cellular organisms → Bacteria1283Open in IMG/M
3300005445|Ga0070708_100839697All Organisms → cellular organisms → Bacteria → Acidobacteria863Open in IMG/M
3300005467|Ga0070706_100850678All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium843Open in IMG/M
3300005555|Ga0066692_10343142All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae947Open in IMG/M
3300005559|Ga0066700_10097691All Organisms → cellular organisms → Bacteria1918Open in IMG/M
3300005566|Ga0066693_10190819All Organisms → cellular organisms → Bacteria789Open in IMG/M
3300005569|Ga0066705_10377661All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium890Open in IMG/M
3300005598|Ga0066706_10303658All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1256Open in IMG/M
3300005718|Ga0068866_10260098All Organisms → cellular organisms → Bacteria → Acidobacteria1066Open in IMG/M
3300005764|Ga0066903_106287481All Organisms → cellular organisms → Bacteria → Acidobacteria620Open in IMG/M
3300005841|Ga0068863_101707191All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae639Open in IMG/M
3300005843|Ga0068860_102264173All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300006175|Ga0070712_102018569All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300006797|Ga0066659_11032341All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300006903|Ga0075426_10656726All Organisms → cellular organisms → Bacteria785Open in IMG/M
3300007788|Ga0099795_10011978All Organisms → cellular organisms → Bacteria2614Open in IMG/M
3300009143|Ga0099792_10748175All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium636Open in IMG/M
3300009148|Ga0105243_10508842All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1143Open in IMG/M
3300010048|Ga0126373_11945024All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium651Open in IMG/M
3300010358|Ga0126370_10462800All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300010358|Ga0126370_10468167All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1056Open in IMG/M
3300010360|Ga0126372_10693192All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium993Open in IMG/M
3300010360|Ga0126372_11206457All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium781Open in IMG/M
3300010360|Ga0126372_11789656All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300010360|Ga0126372_12769870All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium542Open in IMG/M
3300010361|Ga0126378_11547619All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium752Open in IMG/M
3300010376|Ga0126381_102519418All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium737Open in IMG/M
3300011270|Ga0137391_11111002All Organisms → cellular organisms → Bacteria638Open in IMG/M
3300011271|Ga0137393_10034145All Organisms → cellular organisms → Bacteria3878Open in IMG/M
3300012198|Ga0137364_10899486All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium670Open in IMG/M
3300012199|Ga0137383_11374860All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300012202|Ga0137363_10109766All Organisms → cellular organisms → Bacteria2111Open in IMG/M
3300012202|Ga0137363_10406906All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1134Open in IMG/M
3300012205|Ga0137362_10222735All Organisms → cellular organisms → Bacteria → Acidobacteria1627Open in IMG/M
3300012350|Ga0137372_10479642All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium928Open in IMG/M
3300012354|Ga0137366_10217110All Organisms → cellular organisms → Bacteria → Acidobacteria1424Open in IMG/M
3300012361|Ga0137360_11559505All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium565Open in IMG/M
3300012362|Ga0137361_10657391All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium959Open in IMG/M
3300012917|Ga0137395_10279069All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1180Open in IMG/M
3300012924|Ga0137413_10447380All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium940Open in IMG/M
3300012929|Ga0137404_11031822All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium753Open in IMG/M
3300012929|Ga0137404_11313712All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium667Open in IMG/M
3300012930|Ga0137407_10828054All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium874Open in IMG/M
3300012944|Ga0137410_11824423All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300013308|Ga0157375_12277070All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium646Open in IMG/M
3300015264|Ga0137403_10523885All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1055Open in IMG/M
3300016371|Ga0182034_10437241All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1081Open in IMG/M
3300017936|Ga0187821_10002117All Organisms → cellular organisms → Bacteria → Acidobacteria6278Open in IMG/M
3300018468|Ga0066662_13019184All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300018482|Ga0066669_11191791All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300020140|Ga0179590_1053023All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1047Open in IMG/M
3300020579|Ga0210407_10158185All Organisms → cellular organisms → Bacteria1749Open in IMG/M
3300021420|Ga0210394_11136692All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium672Open in IMG/M
3300021560|Ga0126371_12576229All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium616Open in IMG/M
3300021560|Ga0126371_13130813All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium560Open in IMG/M
3300024288|Ga0179589_10124347All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1078Open in IMG/M
3300024331|Ga0247668_1083210All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium647Open in IMG/M
3300024331|Ga0247668_1102178All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300025922|Ga0207646_10638510All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium954Open in IMG/M
3300025927|Ga0207687_10925959All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium746Open in IMG/M
3300026088|Ga0207641_11511180All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium673Open in IMG/M
3300026304|Ga0209240_1251699All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300026356|Ga0257150_1045276All Organisms → cellular organisms → Bacteria647Open in IMG/M
3300026514|Ga0257168_1101482All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium640Open in IMG/M
3300026542|Ga0209805_1233360All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium750Open in IMG/M
3300026557|Ga0179587_10505142All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium793Open in IMG/M
3300026557|Ga0179587_10969127All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium560Open in IMG/M
3300027502|Ga0209622_1072245All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium630Open in IMG/M
3300027842|Ga0209580_10625860All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300027874|Ga0209465_10098488All Organisms → cellular organisms → Bacteria → Acidobacteria1433Open in IMG/M
3300028145|Ga0247663_1068990All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium616Open in IMG/M
3300028380|Ga0268265_11562952All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium664Open in IMG/M
3300031057|Ga0170834_112797098All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium890Open in IMG/M
3300031538|Ga0310888_11016883All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium521Open in IMG/M
3300031718|Ga0307474_11584408All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium515Open in IMG/M
3300031720|Ga0307469_11346574All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium679Open in IMG/M
3300031724|Ga0318500_10532366All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium592Open in IMG/M
3300031820|Ga0307473_10353740All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium946Open in IMG/M
3300031823|Ga0307478_11174375All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis640Open in IMG/M
3300031910|Ga0306923_10112618All Organisms → cellular organisms → Bacteria → Acidobacteria3080Open in IMG/M
3300031946|Ga0310910_10985882All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium659Open in IMG/M
3300031947|Ga0310909_10438930All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1096Open in IMG/M
3300031954|Ga0306926_12306793All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300031959|Ga0318530_10354268All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300032001|Ga0306922_10298807All Organisms → cellular organisms → Bacteria → Acidobacteria1729Open in IMG/M
3300032001|Ga0306922_11963614All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium571Open in IMG/M
3300032013|Ga0310906_10681204All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium716Open in IMG/M
3300032180|Ga0307471_101408286All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium857Open in IMG/M
3300032180|Ga0307471_101720301All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium780Open in IMG/M
3300032205|Ga0307472_100318483All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1260Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil23.76%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil10.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.90%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.92%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.95%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.96%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.96%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.99%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.99%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.99%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.99%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.99%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.99%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002917Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cmEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020140Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300024331Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK09EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026356Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-AEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026542Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027502Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300028145Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031959Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_067914202170459010Grass SoilMVDGVAWSGMNVPADKSAMYQRIEELTGAQASAFELGRALRDDHAHSEITRAYGKYLEAVEFVIHALDALVPKREWQRIKRQKF
INPgaii200_087742812228664022SoilKSISSITVLLRHVLIALGEDAPPEKHEVYRRIEELTGAEAAVFELGRSLRENHPLAEVTRAYGKYMEAIQFVIDALDALVPKREWQRVRR
JGI25616J43925_1019400423300002917Grasslands SoilISVLLRHFLIVLGEDSSLDKSAIYRRIEELTGAEAAVFELGRQLRDNHPVTEIVRAYGKYLEAIESVIHSLGALVPKREWQRVKKQDF*
Ga0062595_10221483813300004479SoilYAKSISSMTVLLRHVLIAFGEDVPADRTQVYHRIEELTGADASAFALGRALRDNHPSSEILRAFGKYLEAVADVIHALDAIVPKREWQRLRSSPE*
Ga0066672_1074225223300005167SoilRHVLIALGEDPPAHKDEVYRRIEELTGAEASVFELGRALRDNHVHSEIARAFGKYLEAIEFVIHALDALVPKREWQRVKRQNF*
Ga0066690_1030238813300005177SoilGISVLLRHVLIALGDHPPSEKSDVYRRIEELTGADAAVFQFGRALRDNHPAAEITRAYGKYLEAIEFVIQALDALVPKREWQRVKRQNF*
Ga0066388_10246851713300005332Tropical Forest SoilRHFLIAIGENSDLDHAAVYRRVEELTGAVANAFELGRQLRDNHPATEIVRSYGKYLEAIEAVIHSLDALVPKREWQRVKRQ*
Ga0070687_10104270223300005343Switchgrass RhizosphereSENEAQLREVYAKSISSMTVLLRHVLIAFGEDVPADRTQVYRRIEELTGADASVFELGRALRDNHPSAEISRAFGKYLEAVADVIHALEAIVPKSEWQRLKRARE*
Ga0070709_1167675713300005434Corn, Switchgrass And Miscanthus RhizosphereALQKLRDHFLRASDNEQQLREIYGKSISSITVLLRHVLIALGEDSPSDKSAVYRRIEELTGAEASVFELGRALRDNHAHAEITRAYGKYLEAVEFVIHALDALVPKHEWQRVKKQKF*
Ga0070710_1073550613300005437Corn, Switchgrass And Miscanthus RhizosphereELRTALQKLRDHFLRASDNEQQLREIYGKSISSITVLLRHVLIALGEDSPPDKSAVYRRIEELTGAEASVFELGRALRDNHAHAEITRAYGKYLEAVEFVIHALDALVPKHEWQRLKKQKF*
Ga0070710_1102293213300005437Corn, Switchgrass And Miscanthus RhizosphereHELRIALQRLREHFLRASGNEQQLREIYGKSISSITVLLRHVLIALGEDAPQEKHEVYRRIEELTGAEAAVFELGRELRENHPLAEVTRAYGKYMEAIEFVVDALDALVPKHEWQRVRR*
Ga0070711_10029710233300005439Corn, Switchgrass And Miscanthus RhizosphereLQRLREHFLRSSENEQQLREIYAKSISSITVLLRHVLIALGEDAPSAKNKIYQRIEELTGAEAAVFELGRALRENHPLAEVTRAYGKYMEAIQFVIDALDALVPKREWQRVRR*
Ga0070708_10083969713300005445Corn, Switchgrass And Miscanthus RhizosphereDHFLRASDNEQQLREVYAKSISSISVLLRHFLMAIGENAPAHKSEVYKRVTELTGADAGAFDLGLELRDNHPVSEISRAYGKYLEAIEIVIHSLDALVPKREWQRVKKQNF*
Ga0070706_10085067823300005467Corn, Switchgrass And Miscanthus RhizosphereISVLLRHVLIALGEDPPSEKNDLYQRIEELTGADAAVFQFGRALRDNHPAAEITRAYGKYLEAIEFVIHALNALVPKREWQRVKRQNF*
Ga0066692_1034314213300005555SoilRASENEQELREIYEKSISGISVLLRHVLIALGEDPPSEKSDVYRRIEELSGADAAVFQFGRALRDNHPAAEITRAYGKYLEAIEFVIQALDALVPKREWQRVKRQNF*
Ga0066700_1009769113300005559SoilLQKLRTHFLRASENEQELRQIYEKSISGISVLLRHVLIALGEDPPSEKSDVYRRIEELSGADAAVFQFGRALRDNHPAAEITRAYGKYLEAIEFVIQALDALVPKREWQRVKRQNF*
Ga0066693_1019081923300005566SoilLRHVLMALGEDAASEKSKVYRRIEELTDAQAAVFEFGRALRDNHPVAEITRAYGKYLEAIEIVIAALDALVPKSEWQRIRR*
Ga0066705_1037766113300005569SoilLLRHVLMALGEDAASEKSKVYRRIEELTDAQAAVFEFGRALRDNHPVAEITRAYGKYLEAIEIVIAALDALVPKSEWQRIRR*
Ga0066706_1030365813300005598SoilHFLIALGEDSSSEKSAIYYRIQELTGADASVFELGRALRDNHPVPEITRAYGKYLEAIEIVIHSLDALIPKREWQRVKKQNF*
Ga0068866_1026009813300005718Miscanthus RhizosphereRIHFVHYSENEAQLREVYAKSISSMTVLLRHVLIAFGEDVPADRTHVYRRIEELTGADASVFELGRALRDNHPSAEISRAFGKYLEAVADVIHALEAIVPKSEWQRLKRARE*
Ga0066903_10628748113300005764Tropical Forest SoilHRIEIEHDLRALLQKLRIHFVHYCENEVQLREIYAKSISSVTVLLRHVLIAFGEDVPADRTHIYQRIEELTGAAASAFELGHALRDNHPSAEIARAFGKYLEAISAVIHALDVIVPKREWQRLKRSRE*
Ga0068863_10170719123300005841Switchgrass RhizosphereKLRVHFVHYSENEAQLREVYAKSISSMTVLLRHVLIAFGEDVPADRNHLYRRIEELTGADASAFELGRALRENHPSAEIPRAFGKYLEAIAAVIHALDAIVPKREWQRLRKARD*
Ga0068860_10226417323300005843Switchgrass RhizosphereVPMNLHRIEIEHDLRVLLQKLRIHFVHYSENEAQLREVYAKSISSMTVLLRHVLIAFGEDVPADRTHVYRRIEELTGADASVFELGRALRDNHPSAEISRAFGKYLEAVADVIHALEAIVPKSEWQRLKRARE*
Ga0070712_10201856923300006175Corn, Switchgrass And Miscanthus RhizosphereEIYGKSVSSISVLLRHVLIALGEDPPEEKSGVYARIEELTGADAAVFEFGRALRDNHPAAEITRAYGRYLEAVEIVIQALDALVPKREWQRVKRQDF*
Ga0066659_1103234123300006797SoilELREIYEKSISGISVLLRHVLIALGEDPPSEKSDVYRRIEELSGADAAVFQFGRALRDNHPAAEITRAYGKYLEAIEFVIQALDALVPKSEWQRVKRQSF*
Ga0075426_1065672613300006903Populus RhizosphereRHVLIAFGEDAPADPDRLYQRVEELTGADAAAFELGRALRDNHPSPEISRSFGKYLEAIAAVILGLDAIIPKREWQRLKKAHL*
Ga0099795_1001197843300007788Vadose Zone SoilELREIYGKSISSITVLLRHVLIALGEDVPADKSGVYQRIEELTGAPASVFELGRALRDNHAHSEITRAYGKYLEAVELVIHALDALVPKQEWQRVKKQKF*
Ga0099792_1074817523300009143Vadose Zone SoilRHVLIALGEDVPADKSAVYQRIEELTGAPASTFELGRALRDNHAHSEITRAYGKYLEAVEFVIHALDALVPKREWQRVKKQKF*
Ga0105243_1050884213300009148Miscanthus RhizosphereFGRDPIAGLEVPMNLHRIEIEHDLRVLLQKLRIHFVHYSENEAQLREVYARSISSMTVLLRHVLIAFGEDVPADRTQVYHRIEELTGADASVFELGRALRDNHPSAEISRAFGKYLEAVADVIHALEAIVPKSEWQRLKRARE*
Ga0126373_1194502413300010048Tropical Forest SoilKSISSNTVLLRHVLIALGEDAPNENREIYRRIEELTGADAAAFALGRELRDNHPVSEITRAYGKYLEAVESVILALDALVPKREWQRVKRQNF*
Ga0126370_1046280023300010358Tropical Forest SoilVLIAFGEEVPMDRNHLYRRIEELTGADASAFELGRALRENHAFAEIPRAFGKYLEAIAAVIHALDALVPKQEWQRLKKSRL*
Ga0126370_1046816733300010358Tropical Forest SoilTVLLRHVLIAFGEDVPAERALLFQRIEELTGAEASAFELGRRLREDHRPAELQRAFGNYLAAIAAVIRGLDAIVPKREWQRLKRSRD*
Ga0126372_1069319223300010360Tropical Forest SoilISSITALLRHFLIALGENADTDHSQVYQRVAELTGADASTFELGHALRENHPVTEIARAYGKYLAAIEVVVHSLDTLVPKREWQRVKRQ*
Ga0126372_1120645713300010360Tropical Forest SoilAKSISSVTVLLRHVLIAFGEDVPSDRNHLYRRIEELTGADGSAFELGHALRENHHTSEIPRSFGKYLEAISAVIQALDAIVPKREWQRLRKSRD*
Ga0126372_1178965613300010360Tropical Forest SoilRYAENEAQLREIYSQSISSVSTLLRHFLIAIGENSDLDHAAVYRRVEELTGAVANAFELGRQLRDNHPATEIVRSYGKYLEAIEAVIHSLDALVPKREWQRVKRH*
Ga0126372_1276987013300010360Tropical Forest SoilRHVLIAFGEEVPMDRNHLYRRIEELTGADASAFELGRALRENHAFAEIPRAFGKYLEAIAAVIHALDALVPKQEWQRLKKSRL*
Ga0126378_1154761923300010361Tropical Forest SoilVLLRHVLIAFGEELPAEKSGVYRRIEELTGADAAAFELGQALRGNHPSAELRRAFGKYLEAVEAVIRSLDAIVPKREWQRVKKHNF*
Ga0126381_10251941823300010376Tropical Forest SoilVHYSENEAQLREVYAKSISGLTVLLRHVLIALGEEVPAEKSGVYRRIEELTGADAAAFELGQALRGNHPSAELRRAFGKYLEAVEAVIRSLDAIVPKREWQRVKKQSF*
Ga0137391_1111100223300011270Vadose Zone SoilRHVLIALGEDVPPDNSAVYQRIEELTGASASAFELGRALRDNHAHSEITRAYGKYLEAVEFVIHALDALVPKHE*
Ga0137393_1003414553300011271Vadose Zone SoilALQKLRDHFLRASDDEQQLREVYGKSISSITVLLRHFLIALGEDVPPDKSAVYQRIEELTGASASAFELGRSLRDNHAHSEITRAYGKYLEAVEFVIHALDALVPKREWQRVKKQKF*
Ga0137364_1089948613300012198Vadose Zone SoilEIYEKSISGVSVLLRHVLITLGEDPPSEKNDVYQRIEELTGADAAVFQFGRALRDNHPAAEIPRAYGKYLEAIEFVIHALDALVPKREWQRVKRQHF*
Ga0137383_1137486013300012199Vadose Zone SoilIYEKSISGISVLLRHVLIALGEDPPSEKNDLYQRIEELTGADAAVFQFGRALRDNHPAAEITRAYGKYLEAIEFVIHALNALVPKREWQRVKRQNF*
Ga0137363_1010976613300012202Vadose Zone SoilALGEDVPSDKSAVYQRIEELTGAEASVFELGRALRDNHAHSEIIRAYGKYLAAVEFVIHALDALVPKQEWQRVKRQEF*
Ga0137363_1040690613300012202Vadose Zone SoilAHFLRASENEQELREIYEKSISGISVLLRHVLIALAEDPPSEKNDLYQRIEELTGADAAVFQFGRALRDNHPAAEITRAYGKYLEAIEFVIHALNALVPKREWQRVKRQNF*
Ga0137362_1022273533300012205Vadose Zone SoilVLLRHVLIALGEDPPSEKSDVYRRIEELSGADAAGFQFGRAVRDNHPAAEITRAYGKYLEAIEFVIHALDALVPKREWQRVKRQNF*
Ga0137372_1047964213300012350Vadose Zone SoilIYEKSISGISVLLRHVLIALGEDPPSEKSDVYRRIEELSGADAAVFQFGRALRDNHPAAEITRAYGKYLEAIEFVIDALDALVPKREWQRVKRQNF*
Ga0137366_1021711033300012354Vadose Zone SoilFLRASENEQELREIYEKSISGISVLLRHVLIALGEDPPSEKNDLYQRIEELTGADAAVFQFGRALRDNHPAAEITRAYGKYLEAIEFVIHALNALVPKREWQRVKRQNF*
Ga0137360_1155950513300012361Vadose Zone SoilASENEQELREIYEKSISGISVLLRHVLIALGEDPPSEKSDVYRRIEELSGADAAVFQFGRALRDNHPAAEITRAYGKYLEAIEFVIQALDALVPKREWQRVKRQNF*
Ga0137361_1065739113300012362Vadose Zone SoilKLRDHFLRASDDEHQLREIYGKSISSITVLLRHVLIALGEDSPSDKSAVYHRIEELTGAEASVFELGRALRDNHAHSEITRAYGKYLEAVEFVIHALDALVPKHEWQRVKRQKF*
Ga0137395_1027906913300012917Vadose Zone SoilRTALQKLRDHFLRASDDEQQLREVYGKSISSITVLLRHVLIALGEDVPPDNSAVYQRIEELTGAPASAFELGRALRDNHAHSEITRAYGKYLEAVEFVIHALDALVPKHEWQRVKKQKNPTGS*
Ga0137413_1044738023300012924Vadose Zone SoilYGRSISSITVLLRHVLITLGEEVPPEKSAVYQRIEELTGAPASTFELGRALRDNHAHSEITRAYGKYLEAVELVIHALDALVPKREWQRVKKQKF*
Ga0137404_1103182213300012929Vadose Zone SoilGQLREVYEQSISSITTLLRHFLIALGEEADTDHSRVYQRVAELTGADAATFELGRQLRENHSATEITRAYGKYLEAIETVIHSLDALVPKREWQRIRKQHS*
Ga0137404_1131371213300012929Vadose Zone SoilELRTALQKLRAHFLHSSDNEAQLREIYAQSISSISVLLRHFLIVLGEDSSLDKSALYSRIEELTGAEAGVFELGRQLRDNHPVTEIVRTYGKYLEAIEIVIHSLDALVPKREWQRVKKQDF*
Ga0137407_1082805423300012930Vadose Zone SoilASENEQELREIYEKSISSVSVLLRHVLIALGEDPPSEKNDVYRRIEELSGADAAVFQFGRALRDNHPAPEITRAYGKYLEAIEFVIHALDALVPKREWQRVKRQNF*
Ga0137410_1182442313300012944Vadose Zone SoilLRTHFLRAAENEQELREIYEKSISGISVLLRHVLIALGEDPPSEKSDVYRRIEELSGADAAVFQFGRALRDNHPAAEITRAYGKYLEAIEFVIHALDALVPKREWQRVKRQNF*
Ga0157375_1227707023300013308Miscanthus RhizosphereDLRALLQKLRVHFVHYSENEAQLREVYAKSISSMTVLLRHVLIAFGEDVPADRNHLYRRIEELTGADASAFELGRALRENHPSAEIPRAFGKYLEAIAAVIHALDAIVPKREWQRLRKARD*
Ga0137403_1052388523300015264Vadose Zone SoilLLRHFLIALGEEADTDHSRVYQRVAELTGADAATFELGRQLRENHSATEITRAYGKYLEAIETVIHSLDALVPKREWQRIRKQHS*
Ga0182034_1043724113300016371SoilIYAKSISSITVLLRHVLIALGEDSPNGNREIYQRIEELTGADAAAFELGRELRDNHPVSEITRAYGTYLEAVESVILALDALVPKREWQRVKSQNF
Ga0187821_1000211783300017936Freshwater SedimentVLLRHVLIAFGEDAPSEKAALYQRIEQLTAANAAAFEFGQALRHNHPSSEVPRDFGKYLEAIETVIRSLDTRIPKREWQRLRKQNF
Ga0066662_1301918413300018468Grasslands SoilSVLLRHVLIALGEDPPSEKNDLYQRIEELTGADAAVFQFGRALRDNHPAAEITRAYGKYLEAIEFVIHALNALVPKREWQRVKRQNF
Ga0066669_1119179113300018482Grasslands SoilSISVLLRHVLIALGEDPPAHKSEVYRRIEELTGAEASIFELGRALRDNHAHSEIARAFGKYLEAVEFVIHALDTLVPKREWQRVRRQNF
Ga0179590_105302323300020140Vadose Zone SoilLQKLRDHFLRASDDEHQLREIYGKSISSITVLLRHVLIALGEDVPPDKSVVYQRIEELTGAPASAFELGRALRDNHGHSEITRAYGKYLEAAEFVINALDALVPKREWQRIKKQKF
Ga0210407_1015818513300020579SoilNEQQLREIYGKSISSITVLLRHVLIALGEDCSSDKSAVYRRIEELTGAEASVFELGRALRDNHPHSEITRAFGKYLEALEFVIHALDALVPKHEWQRVKKQKF
Ga0210394_1113669223300021420SoilSISSISVLLRHFLIALGEEAPAHKSEVYKRVAELTGADAAVFDLGLELRDNHPVSEIARAYGKYLEAIEIVVHSLDALVPKREWQRVKRQPS
Ga0126371_1257622913300021560Tropical Forest SoilSSITALLRHFLIALGENADTDHAHVYQRVAELTGADASTFELGHSLRENHPLAEVARAYGKYLAAIETVVHSLDALVPKREWQRVKRH
Ga0126371_1313081313300021560Tropical Forest SoilLRIHFVHYSESEVQLREVYAKSISSMTVLLRHVLIAFGEEVPMDRNHLYRRIEELTGADASAFELGRALRENHAFAEIPRAFGKYLEAIAAVIHALDALVPKQEWQRLKKSRF
Ga0179589_1012434713300024288Vadose Zone SoilDAEHQLRETYCKSISSVTVLLRHVLIALGEDVPADKSAVYQRIEELTGAPASTFELGRALRDNHAHSEITRAYGKYLEAVELVIHALDALLPKREWQRVKKQKS
Ga0247668_108321023300024331SoilVHYSENDAQLREIYAKSISGMTVLLRHVLIALGEDVPADRSRLYQRIEELTGADAGVFELGRALRDNHPSAEIPRAFGQYLEATSAVIHALDAIVPKREWQRLKKAHS
Ga0247668_110217823300024331SoilRALLQKLRIHFVHYSENEAQLREIYAKSISGVTVLLRHVLIAFGEDVPADRDRLYQRVEELTGADAAAFELGRALRDNHPSAEISRSFGKYLEAIAAVILGLDTIIPKREWQRLKKAHL
Ga0207646_1063851023300025922Corn, Switchgrass And Miscanthus RhizosphereKLRDHFLRASGDEQQLRETYGKSISSITVLLRHVLIALGEDVPSDKSAVYQRIEELTGAEASVFELGRALRDNHAHSEIIRAYGKYLAAVEFVIHALDALVPKQEWQRVKRQEF
Ga0207687_1092595923300025927Miscanthus RhizosphereLRALLQKLRIHFVHYSENEAQLREVYAKSISSMTVLLRHVLIAFGEDVPADRTQVYRRIEELTGADASAFALGRALRDNHPSSEIIRAFGKYLEAVADVIHALEAIVPKREWQRLRSSPE
Ga0207641_1151118013300026088Switchgrass RhizosphereKLRVHFVHYSENEAQLREVYAKSISSMTVLLRHVLIAFGEDVPADRNHLYRRIEELTGADASAFELGRALRENHPSAEIPRAFGKYLEAIAAVIHALDAIVPKREWQRLRKARD
Ga0209240_125169913300026304Grasslands SoilLQKLRDHFLRSSDNEQQLREIYGKSISSITVLLRHVLIALGEDAPSDKSAVYRRIEELTGAEASVFELGRALRDNHAHPEIMRAYGKYLEAVEFAIHALDALVPKHEWQRVKRQKL
Ga0257150_104527613300026356SoilVLIALGEDVPADKSAVYQRIEELTGAPASTFELGRALRDNHAHSEITRAYGKYLEAVELVIHALDALLPKREWQRVKKQKS
Ga0257168_110148213300026514SoilKSISSITVLLRHVLIALGEDSPSDKSAVYHRIEELTGAEASVFELGRALRDNHAHSEITRAYGKYLEAVEFVIHALDALVPKHEWQRVKRQKF
Ga0209805_123336023300026542SoilQLCHIYGKSISSITVLLRHVLMALGEDAPPEKSKVYRRIEELTDAQAAVFELGRALRDNHPVAEITRAYGKYLEAIEIVIAALDALVPKSEWQRIRR
Ga0179587_1050514223300026557Vadose Zone SoilSITVLLRHVLIALGEDVPPDKSAVYQRIEELTGAPASAFELGRALRDNHGHSEITRAYGKYLEAAEFVINALDALVPKREWQRIKKQKF
Ga0179587_1096912723300026557Vadose Zone SoilLRAHFLHSSDNEAQLREIYAQSISSISVLLRHFLIVLGEDSSLDKSAIYHRIEELTGAEAEVFELGRQLRDNHPVTEIVRAYGKYLEAIEIVIHSLDALVPKREWQRVKKQDF
Ga0209622_107224523300027502Forest SoilSDNEQQLREIYGKSISSITVLLRHVLIALGEDSPSEKSAVFQRIEELTGAQASVFELGRALRDNHPHSEMARAYGKYLEAVELVIHALDALVPKHQWQRVKKPKV
Ga0209580_1062586013300027842Surface SoilYSRSISSVTVLLRHVLIAFGEDAPSEKAALYKRIEQLTAADARAFELGQALRHNHPSSEVARDFGKYLEAIETVIRSLDALIPKREWQRLRKQNF
Ga0209465_1009848833300027874Tropical Forest SoilVLLRHVLIAFGEDVPVDRNHLYRRIEELTGADASAFELGRALRENHAFAEIPRAFGKYLEAIAAVIHALDALVPKQEWQRLKKSRF
Ga0247663_106899013300028145SoilHFLHTFGHEQQLREVYAKSISSITVLLRHVLIALGEEVPFDKSGLYLRIEELTGANAAAFALGGELRDHHPVPELTRAYGKYLEAVESVIHALDALVPKHEWQRVKKQSF
Ga0268265_1156295223300028380Switchgrass RhizosphereDLRALLQKLRVHFVHYSENEAQLREVYAKSISSMTVLLRHVLIAFGEDVPADRNHLYRRIEELTGADASAFELGRALRENHPSAEIPRAFGKYLEAIAAVIHALDAIVPKREWQRLRKAR
Ga0170834_11279709823300031057Forest SoilRAHFLRASDDEHQLRQIYGKSISSITVLLRHVLIALGEDVPPDKSAVYQRIEELTGAPASAFELGRALRDNHGHSEITRAYGKYLEAAEFVINALDALVPKREWQRIKKQKF
Ga0310888_1101688323300031538SoilLREVYAKSISSMTVLLRHVLIAFGEDVPADRNHLYRRIEELTGADASAFELGRALRENHPSAEIPRAFGKYLEAIAAVIHALDAIVPKREWQRLRKARD
Ga0307474_1158440813300031718Hardwood Forest SoilEIYAQSISSISVLLRHFLIVLGEDSSLDKSALYRRIQELTGAEAAVFELGRQLRDNHPVTEIVRAYGKYLEAIEIVIHSLDALVPKREWQRVKKQGF
Ga0307469_1134657413300031720Hardwood Forest SoilLRHVLIALGEDPPSEKSDLYRRIEELSGADAAVFQFGRALRDNHPVAEITRAYGKYLEAIEFVIQALDALVPKREWQRVKRQNF
Ga0318500_1053236613300031724SoilYSENEAQLREIYAKSVSGLTVLLRHVLIALGEEVPAEKGSLYRRIEDLTGADAGAFELGHALRENHPSAELPRAFGRYLEAVAAVIRSLDAIVPKREWQRVKKQNF
Ga0307473_1035374013300031820Hardwood Forest SoilRASENEQELRGIYEKSISGISVLLRHVLIALGEDPPSEKSDVYRRIEELTGADAAVFQLGRALRDNHPVAEITRAYGKYLEGIEFVIQALDVLVPKREWQRVKRQNF
Ga0307478_1117437513300031823Hardwood Forest SoilELLDIGQNHKLLFGPDPIAGIAVPMNLHRVEIEHDLRSHLQRLRIHFVHYSENDGQLREIYSKSISSVTVLLRHVLIAFGEDVPTEKAALYQRIEQLTGADAGAFELGQALRHNHPSSEVPRAFGKYLEAIAAVVHSLDVLVPKREWQRIKKQNF
Ga0306923_1011261843300031910SoilRLEVEHGLRSLLQKLRIHFVHYAEDQAQLREIYAKSISGLTVLLRHVLIALGEQVPPEKSGVYRRIEELTGADAAAFEFGRALRDNHPSAELPRAFGKYLEALEAVIRSLDAIVPKREWQRVKSQNF
Ga0310910_1098588223300031946SoilLLQKLRIHFVHYAEDQAQLREIYAKSISGLTVLLRHVLIALGEQVPPEKSGVYRRIAELTGADAAAFEFGRALRDNHPSAELPRAFGKYLEALEAVIRSLDAIVPKREWQRVKSQNF
Ga0310909_1043893023300031947SoilIEVPMNLHRLEVEHGLRSLLQKLRIHFVHYAEDQAQLREIYAKSISGLTVLLRHVLIALGEQVPPEKSGVYRRIAELTGADAAAFEFGRALRDNHPSAELPRAFGKYLEALEAVIRSLDAIVPKREWQRVKSQNF
Ga0306926_1230679323300031954SoilEHGLRSLLQKLRIHFLHYCENEAQLREIYAKSISGLTVLLRHVLIVFGEDVPAERSDVYRRIEELTGADSGAFELGRALRDNHPAAELPRSFGKYLEAVEAVIRSLDAIIPKREWQRIRK
Ga0318530_1035426813300031959SoilIEVEHGLRSLLQKLRIHYLHYCENEAQLREIYAKSISGLTVLLRHVLIVLGEEVPAEKSAVYRRIEELTGADSAAFELGRALRDNHPATELPRSFGKYLEAVAAVIRALDAIAPKREWQRLKKQHF
Ga0306922_1029880743300032001SoilAQLREIYAKSISGLTVLLRHVLIVLGEEVPAEKSAVYRRIEELTGADSAAFELGRALRDNHPATELPRSFGKYLEAVAAVIRALDAIAPKREWQRLKKQHF
Ga0306922_1196361423300032001SoilAEDQAQLREIYAKSISGLTVLLRHVLIALGEQVPPEKSGVYRRIAELTGADAAAFEFGRALRDNHPSAELPRAFGKYLEALEAVIRSLDAIVPKREWQRVKSQNF
Ga0310906_1068120423300032013SoilHRALLQKLRVHFVHYSENEAQLREVYAKSISSMTVLLRHVLIAFGEDVPADRNHLYRRIEELTGADASAFELGRALRENHPSAEIPRAFGKYLEAIAAVIHALDAIVPKREWQRLRKARD
Ga0307471_10140828613300032180Hardwood Forest SoilHFLRASDKEQELREIYGKSISSITVLLRHVLIALGEDVPSDKSAVYQRIEELTGAEAFVFELGRALRENHAHSEITRAYGKYLEAVEFVINALHALVPKHEWQRVKRQEF
Ga0307471_10172030113300032180Hardwood Forest SoilEQLLREIYGKSISSITVLLRHVLIALGEDSPSDKSAVYQRIEELTGAEASVFELGRALRDNHPHSEIMRAYGKYLEAVEFVIHALDALVPKHEWQRVKKQKL
Ga0307472_10031848323300032205Hardwood Forest SoilISSITVLLRHVLIALGEDVPFDKSGLYLRIEELTGANAAAFALGGELRNHHPVPELTRAYGKYLEAVESVIHALDALVPKHEWQRVKKQSF

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.