Metagenome Family F103663

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103663
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	46 residues
Representative Sequence	MAHWMAEHEVLAAAIFVGLSLALIAIFAALEHRYKQQLTARRKDYFS
Number of Associated Samples	73
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	31.68 %
% of genes near scaffold ends (potentially truncated)	19.80 %
% of genes from short scaffolds (< 2000 bps)	79.21 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.436 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.842 % of family members)
Environment Ontology (ENVO)	Unclassified (32.673 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.475 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 60.00% β-sheet: 0.00% Coil/Unstructured: 40.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF03572	Peptidase_S41	6.93
PF14066	DUF4256	5.94
PF07517	SecA_DEAD	4.95
PF02517	Rce1-like	4.95
PF13517	FG-GAP_3	4.95
PF13180	PDZ_2	2.97
PF04237	YjbR	2.97
PF14582	Metallophos_3	0.99
PF13683	rve_3	0.99
PF02371	Transposase_20	0.99
PF00166	Cpn10	0.99
PF01527	HTH_Tnp_1	0.99
PF14022	DUF4238	0.99
PF00902	TatC	0.99
PF00903	Glyoxalase	0.99
PF01839	FG-GAP	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	6.93
COG0653	Preprotein translocase subunit SecA (ATPase, RNA helicase)	Intracellular trafficking, secretion, and vesicular transport [U]	4.95
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	4.95
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	4.95
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	2.97
COG0234	Co-chaperonin GroES (HSP10)	Posttranslational modification, protein turnover, chaperones [O]	0.99
COG0805	Twin-arginine protein secretion pathway component TatC	Intracellular trafficking, secretion, and vesicular transport [U]	0.99
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.44 %
Unclassified	root	N/A	43.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.44 %
Unclassified	root	N/A	43.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.44 %
Unclassified	root	N/A	43.56 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	30.69 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.81 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.81 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.90 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	4.95 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.81 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.91 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	4.95 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.81 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	4.95 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.98 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.99 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.81 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	4.95 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.99 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.99 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.56 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	18.81 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	4.95 %
Granulicella sp. L60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L60	0.99 %
Candidatus Koribacter versatilis Ellin345	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	0.99 %
Acidobacteriales bacterium 13_1_40CM_3_55_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352024\|deeps__Contig_107346	Not Available	714	Open in IMG/M
2199352024\|deeps__Contig_175120	Not Available	916	Open in IMG/M
3300002568\|C688J35102_120902059	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L60	2154	Open in IMG/M
3300003321\|soilH1_10260224	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300003324\|soilH2_10447776	All Organisms → cellular organisms → Bacteria	1425	Open in IMG/M
3300004479\|Ga0062595_100110917	All Organisms → cellular organisms → Bacteria	1489	Open in IMG/M
3300004479\|Ga0062595_100281132	Not Available	1106	Open in IMG/M
3300004479\|Ga0062595_101008111	Not Available	716	Open in IMG/M
3300005186\|Ga0066676_11158597	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_1_40CM_3_55_5	507	Open in IMG/M
3300005336\|Ga0070680_101608361	Not Available	563	Open in IMG/M
3300005338\|Ga0068868_100479747	Not Available	1086	Open in IMG/M
3300005345\|Ga0070692_10146490	Not Available	1341	Open in IMG/M
3300005345\|Ga0070692_10270192	Not Available	1026	Open in IMG/M
3300005434\|Ga0070709_10330831	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300005434\|Ga0070709_10970992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300005434\|Ga0070709_11125369	Not Available	629	Open in IMG/M
3300005435\|Ga0070714_101118905	Not Available	768	Open in IMG/M
3300005436\|Ga0070713_102087195	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300005437\|Ga0070710_10802049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300005439\|Ga0070711_100115118	Not Available	1980	Open in IMG/M
3300005458\|Ga0070681_10212900	All Organisms → cellular organisms → Bacteria	1849	Open in IMG/M
3300005530\|Ga0070679_101115389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300005533\|Ga0070734_10007785	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8512	Open in IMG/M
3300005533\|Ga0070734_10338865	Not Available	859	Open in IMG/M
3300005535\|Ga0070684_100180106	All Organisms → cellular organisms → Bacteria	1921	Open in IMG/M
3300005537\|Ga0070730_10078117	All Organisms → cellular organisms → Bacteria	2322	Open in IMG/M
3300005537\|Ga0070730_10717686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	633	Open in IMG/M
3300005539\|Ga0068853_100048630	All Organisms → cellular organisms → Bacteria	3643	Open in IMG/M
3300005542\|Ga0070732_10045946	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2517	Open in IMG/M
3300005542\|Ga0070732_10154937	All Organisms → cellular organisms → Bacteria	1364	Open in IMG/M
3300005542\|Ga0070732_10427944	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300005547\|Ga0070693_100066298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2113	Open in IMG/M
3300005568\|Ga0066703_10284278	Not Available	1002	Open in IMG/M
3300005575\|Ga0066702_10220562	Not Available	1153	Open in IMG/M
3300005575\|Ga0066702_10690592	Not Available	609	Open in IMG/M
3300005575\|Ga0066702_10921963	Not Available	521	Open in IMG/M
3300006028\|Ga0070717_10777459	Not Available	871	Open in IMG/M
3300006028\|Ga0070717_11357576	Not Available	646	Open in IMG/M
3300006175\|Ga0070712_100680614	Not Available	876	Open in IMG/M
3300007788\|Ga0099795_10120166	Not Available	1050	Open in IMG/M
3300009093\|Ga0105240_10163914	Not Available	2638	Open in IMG/M
3300009098\|Ga0105245_10014319	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6911	Open in IMG/M
3300009143\|Ga0099792_10041269	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2202	Open in IMG/M
3300009143\|Ga0099792_10110473	All Organisms → cellular organisms → Bacteria	1460	Open in IMG/M
3300009174\|Ga0105241_10709565	Not Available	919	Open in IMG/M
3300009545\|Ga0105237_10650122	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1061	Open in IMG/M
3300009551\|Ga0105238_10020903	All Organisms → cellular organisms → Bacteria	6668	Open in IMG/M
3300009551\|Ga0105238_11331788	Not Available	744	Open in IMG/M
3300010159\|Ga0099796_10187711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300010361\|Ga0126378_11647106	Not Available	729	Open in IMG/M
3300010373\|Ga0134128_10177693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	2402	Open in IMG/M
3300010373\|Ga0134128_10454502	Not Available	1429	Open in IMG/M
3300010373\|Ga0134128_10869761	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300010373\|Ga0134128_11406997	Not Available	768	Open in IMG/M
3300010375\|Ga0105239_10517133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	1358	Open in IMG/M
3300010375\|Ga0105239_12216741	Not Available	639	Open in IMG/M
3300010396\|Ga0134126_11923488	Not Available	647	Open in IMG/M
3300010396\|Ga0134126_12977775	Not Available	512	Open in IMG/M
3300010399\|Ga0134127_10447775	Not Available	1290	Open in IMG/M
3300011269\|Ga0137392_10619040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300011271\|Ga0137393_10657110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300012683\|Ga0137398_10075221	All Organisms → cellular organisms → Bacteria	2069	Open in IMG/M
3300012917\|Ga0137395_10121644	All Organisms → cellular organisms → Bacteria → Acidobacteria	1759	Open in IMG/M
3300012924\|Ga0137413_10420795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	965	Open in IMG/M
3300012930\|Ga0137407_10887130	Not Available	843	Open in IMG/M
3300012957\|Ga0164303_10695989	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	684	Open in IMG/M
3300012960\|Ga0164301_10269095	Not Available	1130	Open in IMG/M
3300012960\|Ga0164301_11148052	Not Available	621	Open in IMG/M
3300012971\|Ga0126369_10864557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	988	Open in IMG/M
3300012984\|Ga0164309_10459800	Not Available	964	Open in IMG/M
3300012986\|Ga0164304_10060303	All Organisms → cellular organisms → Bacteria	2109	Open in IMG/M
3300012986\|Ga0164304_10607807	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	817	Open in IMG/M
3300012986\|Ga0164304_11199512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300013296\|Ga0157374_12867850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300015242\|Ga0137412_10507873	Not Available	922	Open in IMG/M
3300015264\|Ga0137403_11146074	Not Available	623	Open in IMG/M
3300018468\|Ga0066662_10465366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis → Candidatus Koribacter versatilis Ellin345	1138	Open in IMG/M
3300020140\|Ga0179590_1051359	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300021170\|Ga0210400_10013624	All Organisms → cellular organisms → Bacteria	6477	Open in IMG/M
3300021170\|Ga0210400_10401711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300021560\|Ga0126371_10389973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1533	Open in IMG/M
3300024288\|Ga0179589_10135791	All Organisms → cellular organisms → Bacteria	1038	Open in IMG/M
3300025912\|Ga0207707_10386528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1203	Open in IMG/M
3300025912\|Ga0207707_10497566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1040	Open in IMG/M
3300025913\|Ga0207695_11582761	Not Available	536	Open in IMG/M
3300025921\|Ga0207652_11713370	Not Available	533	Open in IMG/M
3300025924\|Ga0207694_10012058	All Organisms → cellular organisms → Bacteria	6517	Open in IMG/M
3300025924\|Ga0207694_10105305	All Organisms → cellular organisms → Bacteria	2239	Open in IMG/M
3300025927\|Ga0207687_10012353	All Organisms → cellular organisms → Bacteria	5583	Open in IMG/M
3300025949\|Ga0207667_11913404	Not Available	555	Open in IMG/M
3300026041\|Ga0207639_11900796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	556	Open in IMG/M
3300027583\|Ga0209527_1108079	Not Available	623	Open in IMG/M
3300027738\|Ga0208989_10238665	Not Available	595	Open in IMG/M
3300027826\|Ga0209060_10005952	All Organisms → cellular organisms → Bacteria → Acidobacteria	8537	Open in IMG/M
3300027842\|Ga0209580_10004261	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6093	Open in IMG/M
3300027842\|Ga0209580_10389197	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300027903\|Ga0209488_10005003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	10239	Open in IMG/M
3300027903\|Ga0209488_10338266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300031122\|Ga0170822_15132768	Not Available	574	Open in IMG/M
3300031231\|Ga0170824_116501905	Not Available	1112	Open in IMG/M
3300031938\|Ga0308175_102318520	Not Available	602	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.17%
Host-Associated	Host-Associated	16.83%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.17%
Plants	Host-Associated → Plants	16.83%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.17%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.40%
Loam	Environmental → Terrestrial → Soil → Loam	22.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.87%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	19.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.94%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.98%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.88%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	9.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	9.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	6.93%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	6.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.98%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352024	Bare-fallow DEEP SOIL	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deeps_01906090	2199352024	Soil	MAHWMAEHEILAAVIFVGLSLALIAIFAALEHRYKQQLTARRKDYFS
deeps_03253200	2199352024	Soil	VMAHWMAEHEVLAAAIFVALSLALTAIFAALERHYQQQLAVRGKNDFS
C688J35102_1209020593	3300002568	Soil	MAHWMAEHEILSAVIFVGLSLALIAFFAALERRYKEQLTARRKDYFL*
soilH1_102602242	3300003321	Sugarcane Root And Bulk Soil	MAHWMAEHEILAAIIFVGLSLTLTAIFAALERRYKHELTARRKDNLS*
soilH2_104477762	3300003324	Sugarcane Root And Bulk Soil	MAHWMAEHEILAAIIFVGLSLALTAIFAALERRYKHELTARRKDNLS*
Ga0062595_1001109171	3300004479	Soil	MAHWMAQHEILAAVIFVGLSLALIAFFATLERRYKEHLMTRRKDYL*
Ga0062595_1002811321	3300004479	Soil	MAHWMAEHEVLAATIFVGLSLALTAIFAAMERRYKQQLTARRKNNFS*
Ga0062595_1010081111	3300004479	Soil	MAEHEVLAAAIFVGLSLALTAIFAALERRYKQQLTARRKDNFS*
Ga0066676_111585971	3300005186	Soil	MAEHEILSAVIFVGLSLALIAFFAALERRYKEQLTARRKD
Ga0070680_1016083611	3300005336	Corn Rhizosphere	MAHWMAEHEAFAAAIFVGLSLALIAIFAAMEHRYKQKLTARRKDYFS*
Ga0068868_1004797471	3300005338	Miscanthus Rhizosphere	MAQWMAEHEVLAAAFFVGLSVALIVIFAALERRYKEQLTARRKDRFS*
Ga0070692_101464901	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MAHWMAEHEVLAAAIFVGLSLALIALFSALERRYKEQLTSRRKNYFS*
Ga0070692_102701922	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	MAHWMAEHEAFAAAIFVGLSLALIAIFAALEHRYKQQLTARRKDYFT*
Ga0070709_103308312	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAHWMAEHEVLAAAIFVGLSLALIALFAALERRYKEQLTSRRKNDFF*
Ga0070709_109709922	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAHWMAEHEILAAAMFVGLSLALIALFAALERRYKEQLTSRRKNYFS*
Ga0070709_111253691	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAQWMAEHEIMAAAVFVGLSLALIAIFAALEHRYKEQLTARRKDYFS*
Ga0070714_1011189053	3300005435	Agricultural Soil	MAHWMAEHEVLAAAIFVGLSLALIALFAALERRYKEQLTSRRKNDFS*
Ga0070713_1020871951	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VLPFGMAHWMAEHEILAAAAFVGLSLALIAFFAALERRYKEQLTSRRKSYFS*
Ga0070710_108020491	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAHWMADHEVLAAALFVGLSLALIAFFAALERRYKEQLTSRRKNYFS*
Ga0070711_1001151181	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MAQWMAEHEVLAAAIFVGLSLALIAIFAALEHRYKEELTARRKDHFS*
Ga0070681_102129002	3300005458	Corn Rhizosphere	MAHWMAQHEVLAAAIFVGLSLALIALFAALERRYKEQLTSRRKSYFS*
Ga0070679_1011153892	3300005530	Corn Rhizosphere	MAHWMAEHEAFAAAIFVGLSLALIAIFAALEHRYKQQLTARRKDYFS*
Ga0070734_100077859	3300005533	Surface Soil	MAHWMAEHEVLAAAIFVALSFALTAFFAALERHYEQQLTSRRKNDFS*
Ga0070734_103388652	3300005533	Surface Soil	MAHWMAEHEIMAAVVFVGLSLALIAIFAALEHRYKQQLTARRKNYYS*
Ga0070684_1001801062	3300005535	Corn Rhizosphere	MAQWMAEHEVLAAAFFVGLSVALIVIFAALERRYKEQLTARRKDHFS*
Ga0070730_100781172	3300005537	Surface Soil	MAHWMAEHEVLAAAIFVALSFALTAFFAALERHYEQQFTSRRKNDFS*
Ga0070730_107176862	3300005537	Surface Soil	MAHWMAEHEVLAAAIFVGLSLALIAIFAALEHRYK
Ga0068853_1000486304	3300005539	Corn Rhizosphere	MAQWMAEHEVLAAAFFVGLSVALIVIFAALERRYKEQLTARRKDYFS*
Ga0070732_100459461	3300005542	Surface Soil	HTPYAYGMAHWMAEHEVLAAAIFVGLSLALTAFFSALERHYKQQLTSRRKNDFS*
Ga0070732_101549372	3300005542	Surface Soil	MAHWMAEHEVLAAAVFVAVSLALTAVFAALERHYKQQLTSRRKNNFS*
Ga0070732_104279442	3300005542	Surface Soil	MAHWMAEHEVLAAAVFVAVSLALTAIFAALERHYKQQLTSRRKNNFS*
Ga0070693_1000662982	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAQWMAEHEVLAAAFFVGLSLALIVIFAALERRYKEQLTARRKDHFS*
Ga0066703_102842782	3300005568	Soil	MAQWMAEHEVLAAVIFVGLSLALIAIFAALEHRYKQQLTTRRKDYFS*
Ga0066702_102205621	3300005575	Soil	MAQWMAEHEVLAAVIFVGLSLALIAIFAALEHRYKQQLTARREDYFS*
Ga0066702_106905922	3300005575	Soil	MAHWMAEHEVLAAAIFVGLSLGLIAIFAALEHRYKQQLTARRKDYFS*
Ga0066702_109219632	3300005575	Soil	MAHWMAEHEILAAAIFVGLSLALIAFFAALERRYKEQLASR
Ga0070717_107774591	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAHWMAEHEILAAAVFVGLSLALIALFAALERRYKEQLTSRRKNDFS*
Ga0070717_113575761	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	WMAEHEVLAAAIFVGLSLALIAIFAALEHRYKEELTARRKDHFS*
Ga0070712_1006806142	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MAEHEIMAAAVFVGLSLALIAIFAALEHRYKQQLTARRKDYFS*
Ga0099795_101201661	3300007788	Vadose Zone Soil	MNQHEILAAVIFVGLSLALISFFAALARRDKGQLTSRRKNY
Ga0105240_101639143	3300009093	Corn Rhizosphere	MAHWMAEHEVLAAAIFVGLSLALTAFFAVLERHYKQPLTSRRKNYFS*
Ga0105245_100143192	3300009098	Miscanthus Rhizosphere	MAHWMAEHEILAAAIFVGLSLALIGFFAALERRYKEQLTSRRKNYFS*
Ga0099792_100412693	3300009143	Vadose Zone Soil	MASWMNQHEILAAVIFVGLSLALIAFFAALERRYKGQLTSRRKNYFP*
Ga0099792_101104732	3300009143	Vadose Zone Soil	MAEHEVLAAGIFVGLSLALIALFAALEQRYKKQLTSRRKNYFS*
Ga0105241_107095652	3300009174	Corn Rhizosphere	MAEHEVLAAAIFVGLSLALTAIFAALERRYKQQLTARQKDNFS*
Ga0105237_106501222	3300009545	Corn Rhizosphere	FGMAHWMAQHEVLAAAIFVGLSLALIALFAALERRYKEQLTSRRKSYFS*
Ga0105238_100209031	3300009551	Corn Rhizosphere	MAQWMAEHEVLAAAFFVGLSLALIVIFAALERRYKGQLTARRKDHFS*
Ga0105238_113317882	3300009551	Corn Rhizosphere	AAFFVGLSVALIVIFAALERRYKEQLTARRKDHFS*
Ga0099796_101877112	3300010159	Vadose Zone Soil	MNQHEILAAVIFVGLSLALIAFFAALERRYKGQLTSRRKNYFP*
Ga0126378_116471061	3300010361	Tropical Forest Soil	MAQWMAEHEVLAAAVFVALSLAITAIFAALERRYGEQ
Ga0134128_101776933	3300010373	Terrestrial Soil	MAQWMAEHEVLAAALFVGLSLALIAVFAVLEHRYKDELTARRKDNFS*
Ga0134128_104545022	3300010373	Terrestrial Soil	MAHWMAEHEVLAAAIFVAISLALTAIFAALERHYQQQLAVRGKNDFS*
Ga0134128_108697611	3300010373	Terrestrial Soil	MAHWMAQHEILAAVIFVGLSLALIAFFATLERRYKEHLMTRRKD
Ga0134128_114069972	3300010373	Terrestrial Soil	EHEALAAAIFVALSLALIAVFAAVERHYKEQLTSSRKNYFS*
Ga0105239_105171332	3300010375	Corn Rhizosphere	MAHWMAKNEVLSAVVFVGLSLARIALFAALERRYKERLASRRKDYFS*
Ga0105239_122167412	3300010375	Corn Rhizosphere	MADWMAEHEVLAAAIFVGLSLALTAIFAALERRYKQQLTARRKDNFS*
Ga0134126_119234881	3300010396	Terrestrial Soil	MAQCMAEHEVLAAAIFVGLSLALIAIFAALEHRYKEELTARRKDHFS*
Ga0134126_129777752	3300010396	Terrestrial Soil	MAHWMAQHEILAAVIFVGLSLALIAFFATLERRYKEHMMTRRKDYL*
Ga0134127_104477753	3300010399	Terrestrial Soil	MAQWMAEHEVLAAAFFVGLSLALIVIFAALERRYKEQLTARRKDYFS*
Ga0137392_106190401	3300011269	Vadose Zone Soil	MASWMNQHEILAAVIFVGLSLALIAFFAALERRYKEQLTSRRKNYFP*
Ga0137393_106571102	3300011271	Vadose Zone Soil	MASWMNQHEILAAVIFVGLSLALIAFFAALERRYKEQLTSRRKNYFS*
Ga0137398_100752212	3300012683	Vadose Zone Soil	MSEHEVLAAAVFVGLSLALTVFFAFLERRYKQQLTGAAKIKLDK*
Ga0137395_101216442	3300012917	Vadose Zone Soil	MNQHEILAAVIFVGLSLALIAFFAALERRYKEQLTSRRKNYFS*
Ga0137413_104207952	3300012924	Vadose Zone Soil	MAHWMAEHETLAAAIFVGLSLALIAIFAALEHRYKQQLTARRKDYFS*
Ga0137407_108871302	3300012930	Vadose Zone Soil	MASWMNQHEILAAAISVGVSLALIAFFAALERRYKEQLTGRRKG*
Ga0164303_106959892	3300012957	Soil	MAHWMADHEILAAAIFVGLSLALIGFFAALERRYKEQLTSRRKNYFS*
Ga0164301_102690952	3300012960	Soil	MAHWMAEHEIMAAVVFVGLSLALIAIFAALEHRYKEQLTARRKDYFS*
Ga0164301_111480522	3300012960	Soil	MAQWMAEHEIMAAAVFVGLSLALIAIFASLEHRYKQQLTARRKDYFS*
Ga0126369_108645572	3300012971	Tropical Forest Soil	MAHWMAQHEVFAAAVFVALSLAITAIFAALERRYGEQITARRKDNYS*
Ga0164309_104598002	3300012984	Soil	EVLAAAIFVGLSLALIAIFAALEHRYKEELTARRKDHFS*
Ga0164304_100603031	3300012986	Soil	MAQWMAEHEIMAAVVFVGLSLALIAIFAALEHRYKEQLTARRKDYFS*
Ga0164304_106078072	3300012986	Soil	AGNQSILPSGMAHWMAEHEILAAAIFVGLSLALIGFFAALERRYKEQLTSRRKNYFS*
Ga0164304_111995121	3300012986	Soil	MAHWMAENEVLAAALFVALSLALTAFFAALERHYEQQLTSRRKNNFS*
Ga0157374_128678501	3300013296	Miscanthus Rhizosphere	WMAEHEVLAAAIFVGLSLALIALFSALERRYKEQLTSRRKNYFS*
Ga0137412_105078732	3300015242	Vadose Zone Soil	MNQHEVLAAAIFVGVSLALMAFFSALERRYKERLTSCRKNEIP*
Ga0137403_111460742	3300015264	Vadose Zone Soil	MNQHEILAAAVFVGLSLALIAFFAALERRYKEQLTGRRKD*
Ga0066662_104653661	3300018468	Grasslands Soil	MAHWMAEHEVLAAAIFVGLSLGLIAIFAALEHRYKQQLTARRKDYFS
Ga0179590_10513592	3300020140	Vadose Zone Soil	MNQHEVLAAAIFVGVSLALMAFFSALERRYKQQLTSCRKNEIP
Ga0210400_100136246	3300021170	Soil	MNQHEILAAALFVGLSLALTVFFAALERRYKQQLTSPRKNYFSE
Ga0210400_104017111	3300021170	Soil	MSQHEALAAVIFVGLSLALIAFFAALERRYKKQLTSPRKNYFSERAP
Ga0126371_103899732	3300021560	Tropical Forest Soil	MAQWMVEHEILAAAIFVGLSLALVAIFAALEHRYKKQLTARRKDHFS
Ga0179589_101357912	3300024288	Vadose Zone Soil	MNQHEVLAAAIFVGVSLALMAFFSALERRYKQQLTSSRKNEI
Ga0207707_103865282	3300025912	Corn Rhizosphere	MAHWMAEHEVLAAAIFVGLSLALIALFSALERRYKEQLTSRRKNYFS
Ga0207707_104975662	3300025912	Corn Rhizosphere	MAHWMAQHEVLAAAIFVGLSLALIALFAALERRYKEQLTSRRKSYFS
Ga0207695_115827611	3300025913	Corn Rhizosphere	MAHWMAQHEILAAVIFVGLSLALIAFFATLERRYKEHLMTRRKDYL
Ga0207652_117133701	3300025921	Corn Rhizosphere	MAEHEAFAAAIFVGLSLALIAIFAALEHRYKQQLTARRKDYFS
Ga0207694_100120583	3300025924	Corn Rhizosphere	MAHWMAEHEVLAAAIFVGLSLALTAFFAVLERHYKQPLTSRRKNYFS
Ga0207694_101053054	3300025924	Corn Rhizosphere	MAQWMAEHEVLAAAFFVGLSLALIVIFAALERRYKEQLTARRKDYFS
Ga0207687_100123531	3300025927	Miscanthus Rhizosphere	MAHWMAEHEILAAAIFVGLSLALIGFFAALERRYKEQLTSRRKNYFS
Ga0207667_119134041	3300025949	Corn Rhizosphere	FYAYVMAHWMAEHEVLAAAIFVAISLALTAIFAALERHYQQQLAVRGKNDFS
Ga0207639_119007961	3300026041	Corn Rhizosphere	MAEHEVLAAAIFVGLSLALIALFSALERRYKEQLTSRRKN
Ga0209527_11080792	3300027583	Forest Soil	MNQHEVLAAVIFVGLSLAITVLFSFLERRYQRKLTGRRQDKSHQQMG
Ga0208989_102386651	3300027738	Forest Soil	MTEHEVLAAVAFVGLSLALTVFFAALERRYKRELTDRSNKYTP
Ga0209060_100059522	3300027826	Surface Soil	MAHWMAEHEVLAAAIFVALSFALTAFFAALERHYEQQLTSRRKNDFS
Ga0209580_100042616	3300027842	Surface Soil	MAHWMAEHEVLAAAVFVAVSLALTAVFAALERHYKQQLTSRRKNNFS
Ga0209580_103891972	3300027842	Surface Soil	MAHWMAEHEVLAAAIFVGLSLALTAFFSALERHYKQQLTSRRKNDFS
Ga0209488_100050033	3300027903	Vadose Zone Soil	MASWMNQHEILAAVIFVGLSLALIAFFAALERRYKGQLTSRRKNYFP
Ga0209488_103382662	3300027903	Vadose Zone Soil	MAHWMTEHEVLAAGIFVGLSLALIALFAALEQRYKKQLTSRRKNYFS
Ga0170822_151327682	3300031122	Forest Soil	MAHWMVEHEVLAAAIFVGLSLALIAIFAALEHRYKQQLTARRKDYFS
Ga0170824_1165019051	3300031231	Forest Soil	MAHWMAEHEVLAAAIFVGLSLALIAIFAALEHRYKQQLTARRKDYFS
Ga0308175_1023185201	3300031938	Soil	MAEHEALAAAIFVALSLALIAIFAALERHYKQPLTSRRKNYFS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103663

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences