Metagenome Family F103733

Basic Information
Family ID	F103733
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	47 residues
Representative Sequence	IDFDVFNVLNAATPTAANFQSGPSFGYVTNVIPARIARLGVRFRF
Number of Associated Samples	91
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.99 %
% of genes from short scaffolds (< 2000 bps)	0.99 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Most Common Taxonomy
Group	Unclassified (99.010 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (14.852 % of family members)
Environment Ontology (ENVO)	Unclassified (23.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.485 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.59% β-sheet: 0.00% Coil/Unstructured: 90.41%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF09656	PGPGW	0.99
PF00507	Oxidored_q4	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0838	NADH:ubiquinone oxidoreductase subunit 3 (chain A)	Energy production and conversion [C]	0.99

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
All Organisms	root	All Organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
cellular organisms	root	All Organisms → cellular organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.99 %

Scaffold	Taxonomy	Length	IMG/M Link
3300005536\|Ga0070697_101955892	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.25%
Host-Associated	Host-Associated	24.75%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	72.28%
Plants	Host-Associated → Plants	24.75%
Aquatic	Environmental → Aquatic	2.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	71.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.94%
Freshwater	Environmental → Aquatic → Freshwater	1.98%
Sediment	Environmental → Aquatic → Sediment	0.99%
Floodplain	Environmental → Terrestrial → Floodplain	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.45%
Loam	Environmental → Terrestrial → Soil → Loam	14.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.95%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.98%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.99%
Lake	Environmental → Aquatic → Freshwater → Lake	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.73%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	14.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.95%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.99%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.99%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.98%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.99%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.99%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.99%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009662	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-060	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063454_1009555251	3300004081	Soil	RFEIDFDVFNVLNAATATGANFQSGPSFGFVTGVIPARIARLGARFRF*
Ga0062591_1024866411	3300004643	Soil	FDVFNVLNAATPTGANFQSGPSFGYVTGVIPARIARLGARFRF*
Ga0066673_105806642	3300005175	Soil	GAGTRLAIDFDVFNVFNAATATNANFQAGPSFGYITGVIPARIARLGARFRF*
Ga0066679_107285472	3300005176	Soil	FEVDVDVFNVLNAATPTGANFQSGPTFGYVTGVIPARIARLSGRFRF*
Ga0066684_110864152	3300005179	Soil	VFNALNAATPTGAQFQSGPSFGFVTGVIPARIARLGLRFRF*
Ga0066671_103528421	3300005184	Soil	LDIDFDVFNALNAATPTGAQFQSGPSFGFVTGVIPARIARLGLRFRF*
Ga0066675_110909932	3300005187	Soil	DVDVFNVLNAATPTAASFVTGPSFGFVSSVIPARIARLGVRFLF*
Ga0065705_110304201	3300005294	Switchgrass Rhizosphere	GGGRRLNFDVDVFNVLNAATPTAATFVTGPSFGYTSSVIPARIARLGVRFLF*
Ga0070690_1006381932	3300005330	Switchgrass Rhizosphere	LGGSRRFEIDFDVFNVLNAATPTGANFQSGPSFGYVTGVIPARIARLGARFRF*
Ga0070680_1004423501	3300005336	Corn Rhizosphere	SKDISLGGSRHLDIDFDVFNVLNAATPTAANFQSGPSFGYITGVLPARIARLGARFRF*
Ga0070673_1014185041	3300005364	Switchgrass Rhizosphere	LNIDVDVFNVLNAATPTAASFVTGPSFGFVSSVIPARIARLGLRFLF*
Ga0066681_104327922	3300005451	Soil	FNVLNAATPTNANFQSGPSFGYVTGVIPARIARLGVRFLF*
Ga0066687_109810842	3300005454	Soil	RRFEIDVDVFNVLNAAAPTGANFQSGPSFGFVTGVIPARIARLGARFRF*
Ga0070706_1018530462	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	IDFDVFNVLNAATPTGANFQTGPSFGFITGVIPARIARLGGRFRF*
Ga0070707_1023386201	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VFNVLNAATPTAASFVTGPSFGFVSSVIPARIARLGLRFLF*
Ga0073909_102065771	3300005526	Surface Soil	LKLGGSRRLNIDVDVFNVLNAATPTAATFVTGPSFGYTSSVIPARIARLGVRYVF*
Ga0070697_1019558922	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	SIGGGRRFEIDVDVFNVLNAATPTGANFQAGPSFGFVTGVIPARIARLGARFRF*
Ga0070672_1007244452	3300005543	Miscanthus Rhizosphere	TGRRLNIDVDVFNVLNAATPTAASFVTGPSFGFVSSVIPARIARLGLRFLF*
Ga0070695_1014854461	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VDVFNVLNAATPTNANFQSGPTFGYVTGVIPARIARLGVRFRF*
Ga0066707_108645281	3300005556	Soil	LNAATPTGAQFQSGPSFGFVTGVIPARIARLGLRFRF*
Ga0066708_106716881	3300005576	Soil	LDFDIFNVLNAATPTSANFQSGPTFGYVTNVIPARIARLGLRFRF*
Ga0070702_1015541921	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	SKEFKLAMGRLNIHVDVFNVLNAATPTAATFVTGPSFGYTTSVIPARIARLGLRYVF*
Ga0068859_1003923851	3300005617	Switchgrass Rhizosphere	IDVDVFNVLNAATPTAASFVTGPSFGFVSSVIPARIARLGLRFLF*
Ga0068859_1005944831	3300005617	Switchgrass Rhizosphere	VFNVLNAATPTNANFVTGPSFGFVSSVIPARIARLGLRFLF*
Ga0066905_1008549391	3300005713	Tropical Forest Soil	DFSLGAARRVDVDLDVFNVLNAATPTAANFQSGPSFGFVTGVIPARIARLGVRFRF*
Ga0066903_1015036122	3300005764	Tropical Forest Soil	GSKQLSMGGSRRLDLDFDLFNVLNAATATGATFASGPTFGFVTGVIPARIARLGVRFRF*
Ga0068858_1023346111	3300005842	Switchgrass Rhizosphere	ATPTNATFVTGPTFGYTSSVIPARIARLGVRFLF*
Ga0070716_1016216182	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	SKGFSLGADRRFEIDVDVFNVLNAATPTSANFQSGPSFGYITGVIPARIARLGVRFRF*
Ga0079222_104434642	3300006755	Agricultural Soil	GGGRRFEIDFDVFNVLNAATPTGANFQSGPSFGFVTGVIPARIARLGARFRF*
Ga0066665_100746781	3300006796	Soil	GGRRLDVDVDVFNVLNAATPTAANFQSGPSFGYVTNVIPARIARLGVRFRF*
Ga0075428_1006157591	3300006844	Populus Rhizosphere	MPYRGAAFVTGPSFGYTSSVIPARTARLGVRFLF*
Ga0075421_1019438782	3300006845	Populus Rhizosphere	IDLDVFNVLNAATPTRAQFQAGPSFGFVTSVLPARIARLGGRFRF*
Ga0075434_1003706192	3300006871	Populus Rhizosphere	GGGRRFEIDVDVFNVLNAATPTGANFQSGPSFGFVTGVIPARIARLGARFRF*
Ga0075434_1009015992	3300006871	Populus Rhizosphere	IDFDVFNVLNAATPTAANFQSGPSFGYVTNVIPARIARLGVRFRF*
Ga0075434_1017386722	3300006871	Populus Rhizosphere	RRLGIDFDVFNALNAATPTGATFASGPTFGYVTGVVPARIARLGARFTF*
Ga0075424_1008106921	3300006904	Populus Rhizosphere	DVFNVLNAATPTGANFQSGPSFGFVTGVIPARIARFGARLRF*
Ga0075424_1020868671	3300006904	Populus Rhizosphere	FDVFNALNAATPTGATFASGPTFGYVTGVVPARIARLGARFTF*
Ga0075424_1021723172	3300006904	Populus Rhizosphere	DFDVFNVLNAATPTAANFQSGPSFGYVTNVIPARIARLGVRFRF*
Ga0079219_112881351	3300006954	Agricultural Soil	AATPTAANFQSGPSFGFVTGVIPARIARLGARFRF*
Ga0075435_1016421031	3300007076	Populus Rhizosphere	VDVFNVLNAATPTSANFQSGPSFAYVTGVIPARIARLGARFRF*
Ga0066710_1004706261	3300009012	Grasslands Soil	RRLDIDFDVFNALNAATPTGAKFESGPSFGFVTGVIPARIARLGLRFRF
Ga0066710_1027668402	3300009012	Grasslands Soil	NAATPTSANFQSGPSFGYVTNVIPARIARLGVRFRF
Ga0099827_118295961	3300009090	Vadose Zone Soil	NVLNAATPTNANFQSGPSFGYVTNVIPARIARLGVRFRF*
Ga0079224_1003010994	3300009095	Agricultural Soil	MRGRTFTLVSVDVFNVVNTNAVTGAQFSSGPTFGYAQDVIPARIARIGVRFEF*
Ga0114129_113437942	3300009147	Populus Rhizosphere	DVFNVLNAATATAANFQAGPSFGYVTNVIPARIARLGVRFRF*
Ga0111538_133940611	3300009156	Populus Rhizosphere	AATPTSANFQAGPSFGYVTNVIPARIARLGVRFRF*
Ga0114970_103829182	3300009163	Freshwater Lake	RRLDIDLDVFNVLNAATPTAATFQAGPTFGYITGVIPARIARAGVRLRF*
Ga0105249_134656622	3300009553	Switchgrass Rhizosphere	VKLGSGRRLNIDVDVFNVLNAATPTAANFQTGPSFGYVTSVIPARIARLGVRFLF*
Ga0105856_12669771	3300009662	Permafrost Soil	DVFNVLNAATPTAANFVTGSAFGFVSSVIPARIARLGVRFLF*
Ga0126374_106052212	3300009792	Tropical Forest Soil	FNVLNAATPTAANFQSGPSFGYVTGVIPARIARLGARFRF*
Ga0134080_102910232	3300010333	Grasslands Soil	VDVDVDVFNVLNAATPTNANFQSGPSFGYVTGVIPARIARLGVRFLF*
Ga0134071_102738982	3300010336	Grasslands Soil	MRLGIDADVFNVLNAATPTNANFQSGPSFGYITGVIPARIARLGARFSF*
Ga0126378_109683142	3300010361	Tropical Forest Soil	ERWKAAIDLDVFNLLNEATPLGANWSSGPTFGYVTDVIPGRIARIGVKFEF*
Ga0134122_103802092	3300010400	Terrestrial Soil	GGRRFEIDFDLFNVLNAATPTGANFQSGPSFGFVTGVIPARIARLGARFRF*
Ga0137392_106281592	3300011269	Vadose Zone Soil	VFNVLNTNAPTAATFASGLTFGYVTGVIPARIARIAARFRF*
Ga0137393_116978552	3300011271	Vadose Zone Soil	DFDVFNVLNTNAPTAATFASGLTFGYVTGVIPARIARIAARFRF*
Ga0137388_112052832	3300012189	Vadose Zone Soil	NVLNAATPTNANFQSGPSFGYVTGVIPARIARLGVRFRF*
Ga0137374_109744942	3300012204	Vadose Zone Soil	LNAATPTAASFVTGPSFGFVSSVIPARIARLGLRFLF*
Ga0137377_100861362	3300012211	Vadose Zone Soil	VDVDIFNVLNAATPTQANFQAGPSFGYVTNVIPARIARLGVRFRF*
Ga0150985_1108130472	3300012212	Avena Fatua Rhizosphere	RRLGIDVDLFNALNVATPTAATFASGPTFGYVTDVVPGRIARIGGKLTF*
Ga0137370_107749812	3300012285	Vadose Zone Soil	RLDIDVDLFNALNAATPTGATFGAGPTFGYVNGVTPARIARLGLRFRF*
Ga0137384_109684931	3300012357	Vadose Zone Soil	KDFSLGGARRFEIDVDVFNVLNAATPTNANFQSGPSFGFITGVIPARIARLGARFRF*
Ga0150984_1169336211	3300012469	Avena Fatua Rhizosphere	VFNLLNAATPTGANFQSGPSFGYVTGVIPGRIARLGGRFRF*
Ga0150984_1221339441	3300012469	Avena Fatua Rhizosphere	TKGIAVGGSRRLGIDVDLFSALNLATPTNATFASGPTFGYVTDVVPGRIARIGGKLTF*
Ga0157288_101598162	3300012901	Soil	KLGGGRRLNIDVDVFNVLNAATPTAATFVTGPSFGYTSSVIPARIARLGVRFMF*
Ga0137394_106587422	3300012922	Vadose Zone Soil	DIDVDLFNVLNAATPTTANFQSGPSFGYVTNVIPARIARVGARFRF*
Ga0137394_109571052	3300012922	Vadose Zone Soil	RIDVDVDVFNVLNAATPTSANFQSGPSFGYVTNVIPARIARLGVRFRF*
Ga0137359_111830331	3300012923	Vadose Zone Soil	RAGKDFSLGGARRIDVDVDVFNVLNAATPTSANFQSGPSFGYVTNVIPARIARLGVRFRF
Ga0137359_117418091	3300012923	Vadose Zone Soil	RRFEIDVDVFNVLNAATPTGANFQAGPSFGFVTGVIPARIARLGARFRF*
Ga0137407_109630622	3300012930	Vadose Zone Soil	IDVDVFNVLNAATPTQANFQSGPSFGYVTGVIPARIARLGARFLF*
Ga0164303_111966032	3300012957	Soil	DVFNVLNAATPTNANFQSGPTFGYVTGVIPARIARLAVRFLF*
Ga0137420_14919188	3300015054	Vadose Zone Soil	LNAATPTLASFVTGPSFGFVSSVTPARIARLGLRFLF*
Ga0132255_1029472112	3300015374	Arabidopsis Rhizosphere	VFNVLNAATPTSANFQAGPSFGYVTNVIPARIARLGVRFRF*
Ga0182036_109389721	3300016270	Soil	AATPTAATFVTGPSFGYTTSVIPARIARLGVRYVF
Ga0182034_108586272	3300016371	Soil	FNVFNAATPTGANFQSGPTFGYVTGVIPARIARLGARFRF
Ga0184625_106300851	3300018081	Groundwater Sediment	SKDLKLGTGRRLNIDVDVFNVLNAATPTAASFVTGPSFGFVSSVIPARIARLGLRFLF
Ga0066667_113900761	3300018433	Grasslands Soil	IDLDVDVFNVLNAATPTSANFQAGPSFGYVTNVIPARIARLGGGFRF
Ga0066669_111568782	3300018482	Grasslands Soil	GAGTRLAIDFDVFNVFNAATPTNANFQAGPSFGYITGVIPARIARLGARFRF
Ga0210382_104217861	3300021080	Groundwater Sediment	DLFNVLNAATPTNATFVTGPSFGYTSSVIPARIARLGVRFVF
Ga0207653_103529081	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	DVFNVLNAATPTNANFQSGPSFGYVTGVIPARIARLGVRFRF
Ga0207688_101708362	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VFNLLNAATPTAATFVTGPSFGYTSSVIPARIARLGVRFLF
Ga0207652_109173752	3300025921	Corn Rhizosphere	RHLDIDFDVFNVLNAATPTAANFQSGPSFGYITGVLPARIARLGARFRF
Ga0207646_105141281	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	SAVDVFNVLNAATALSANFQSGPSFGYVTNVIPARIARLGARFRF
Ga0207690_111301751	3300025932	Corn Rhizosphere	NVLNAATPTAANFQSGPSFGYITGVLPARIARLGARFRF
Ga0207686_101123972	3300025934	Miscanthus Rhizosphere	IDVDVFNVLNAATPTAATFVTGPSFGYTTSVIPARIARLGLRYVF
Ga0207712_119292322	3300025961	Switchgrass Rhizosphere	VFNVLNAATPTAATFVTGPSFGYTSSVIPARIARLGVRFLF
Ga0209761_11547702	3300026313	Grasslands Soil	DFSLGSGRRIDVDFDIFNVLNAATPTSANFQSGPSFGYVTNVIPARIARLGVRFRF
Ga0209687_12816172	3300026322	Soil	DFSIGGGRRFEIDVDVFNVLNAAAPTGANFQSGPSFGFVTGVIPARIARLGARFRF
Ga0137415_112968091	3300028536	Vadose Zone Soil	DIDFDVFNALNAATPTGAQFQSGPSFGFVTGVIPARIARLGLRFRF
Ga0307282_106247802	3300028784	Soil	FNVLNAATPTAANFQSGPSFGFVSNVIPARIARLGVRFRF
Ga0307312_109301682	3300028828	Soil	LDVDVDIFNVLNAATPTAANFQSGPSFGFVSNVIPARIARLGVRFRF
Ga0318538_100927642	3300031546	Soil	MGRLSIDVDVFNVLNAATPTAATFVTGPSFGYTTSVIPARIARLGVRYVF
Ga0306919_114686361	3300031879	Soil	VDVFNVLNAATPTAATFVTGPSFGYTTSVIPARIARLGVRYVF
Ga0306925_119720991	3300031890	Soil	FGGDRRFDIDFDIFNVLNAATPTAANFQSGPSFGYVTGVIPARIARLGARFRF
Ga0310900_109875842	3300031908	Soil	ASKDLKLGTGRRLNIDVDVFNVLNAATPTAASFVTGPSFGFVSSVIPARIARLGLRFLF
Ga0306921_103445262	3300031912	Soil	IDLDVFNLLNEATPLGANWSSGPTFGYVTDVIPGRIARIGFKFEF
Ga0306921_105667231	3300031912	Soil	AGRRLEIDLDVFNVFNAATPTGANFQSGPTFGYVTGVIPARIARLGARFRF
Ga0318505_104350951	3300032060	Soil	NVLNAATPTAATFVTGPSFGYTTSVIPARIARLGVRYVF
Ga0307472_1014052342	3300032205	Hardwood Forest Soil	IDVDVLNVLNAATPTAATFVTGPSFGYTTSVIPARIARLGLRYVF
Ga0310914_118979102	3300033289	Soil	KATIDLDVFNLLNEATPLGANWSSGPTFGYVTDVIPGRIARIGFKFEF
Ga0364943_0426946_1_132	3300034354	Sediment	VDVFNVLNAATPTAASFVTGPSFGFVSSVIPARIARLGLRFMF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103733

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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