NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F103734

Metagenome Family F103734

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103734
Family Type Metagenome
Number of Sequences 101
Average Sequence Length 68 residues
Representative Sequence MAKRMPPEVLEYLRKLGKSYGKLGGKKAAENMTPEERSARAKKASLAAAKKRTADRLARERKARRPNN
Number of Associated Samples 89
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 52.53 %
% of genes near scaffold ends (potentially truncated) 31.68 %
% of genes from short scaffolds (< 2000 bps) 78.22 %
Associated GOLD sequencing projects 81
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (64.356 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil
(14.852 % of family members)
Environment Ontology (ENVO) Unclassified
(17.822 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(55.446 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 55.21%    β-sheet: 0.00%    Coil/Unstructured: 44.79%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF08401ArdcN 16.83
PF00589Phage_integrase 2.97
PF01381HTH_3 1.98
PF02566OsmC 1.98
PF07238PilZ 1.98
PF13408Zn_ribbon_recom 0.99
PF07995GSDH 0.99
PF16640Big_3_5 0.99
PF00196GerE 0.99
PF12728HTH_17 0.99
PF00326Peptidase_S9 0.99
PF01474DAHP_synth_2 0.99
PF03466LysR_substrate 0.99
PF05853BKACE 0.99
PF01850PIN 0.99
PF04542Sigma70_r2 0.99
PF03050DDE_Tnp_IS66 0.99
PF12704MacB_PCD 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG4227Antirestriction protein ArdCReplication, recombination and repair [L] 16.83
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 1.98
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 1.98
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.99
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.99
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.99
COG2133Glucose/arabinose dehydrogenase, beta-propeller foldCarbohydrate transport and metabolism [G] 0.99
COG32003-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase, class IIAmino acid transport and metabolism [E] 0.99
COG3246Uncharacterized conserved protein, DUF849 familyFunction unknown [S] 0.99
COG3436TransposaseMobilome: prophages, transposons [X] 0.99
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.99

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms65.35 %
UnclassifiedrootN/A34.65 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2035918004|FACENC_F56XM5W01AHF1WAll Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium518Open in IMG/M
3300000567|JGI12270J11330_10005006All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium9333Open in IMG/M
3300004092|Ga0062389_103776626Not Available568Open in IMG/M
3300005330|Ga0070690_100771867All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Caballeronia → Caballeronia megalochromosomata743Open in IMG/M
3300005332|Ga0066388_104852293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Amel2xE9684Open in IMG/M
3300005434|Ga0070709_11343634All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300005436|Ga0070713_101526017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Amel2xE9648Open in IMG/M
3300005445|Ga0070708_101522221All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium623Open in IMG/M
3300005445|Ga0070708_101727482Not Available581Open in IMG/M
3300005529|Ga0070741_10169306Not Available2166Open in IMG/M
3300005537|Ga0070730_10037591All Organisms → cellular organisms → Bacteria3593Open in IMG/M
3300005538|Ga0070731_10083340All Organisms → cellular organisms → Bacteria2120Open in IMG/M
3300005538|Ga0070731_10793795Not Available628Open in IMG/M
3300005610|Ga0070763_10739262All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300005712|Ga0070764_10891578All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus557Open in IMG/M
3300005764|Ga0066903_105264500All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus684Open in IMG/M
3300005843|Ga0068860_100180939All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2037Open in IMG/M
3300006028|Ga0070717_10220322All Organisms → cellular organisms → Bacteria1668Open in IMG/M
3300006059|Ga0075017_100007518All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae6903Open in IMG/M
3300006173|Ga0070716_101588871All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. Amel2xE9537Open in IMG/M
3300006755|Ga0079222_10029498All Organisms → cellular organisms → Bacteria2321Open in IMG/M
3300006794|Ga0066658_10647829All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300006806|Ga0079220_11117850All Organisms → cellular organisms → Bacteria640Open in IMG/M
3300009012|Ga0066710_102107427All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium829Open in IMG/M
3300009088|Ga0099830_11330071Not Available597Open in IMG/M
3300009089|Ga0099828_11562817All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium581Open in IMG/M
3300009090|Ga0099827_10170395All Organisms → cellular organisms → Bacteria1794Open in IMG/M
3300009176|Ga0105242_10260388All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1567Open in IMG/M
3300009521|Ga0116222_1117754Not Available1144Open in IMG/M
3300009524|Ga0116225_1000963All Organisms → cellular organisms → Bacteria21487Open in IMG/M
3300009545|Ga0105237_10292513All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1631Open in IMG/M
3300009616|Ga0116111_1080206Not Available861Open in IMG/M
3300009824|Ga0116219_10646483Not Available580Open in IMG/M
3300010046|Ga0126384_11721389Not Available593Open in IMG/M
3300010048|Ga0126373_12618374All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium562Open in IMG/M
3300010336|Ga0134071_10699479Not Available536Open in IMG/M
3300010358|Ga0126370_11208382Not Available703Open in IMG/M
3300010361|Ga0126378_12159189Not Available635Open in IMG/M
3300010362|Ga0126377_11927771All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium667Open in IMG/M
3300010362|Ga0126377_12441277Not Available599Open in IMG/M
3300010366|Ga0126379_13871853Not Available501Open in IMG/M
3300010376|Ga0126381_103243600All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300010379|Ga0136449_100285912All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3022Open in IMG/M
3300010379|Ga0136449_101014885All Organisms → cellular organisms → Bacteria1333Open in IMG/M
3300010379|Ga0136449_102613025All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300010379|Ga0136449_103598512Not Available588Open in IMG/M
3300010379|Ga0136449_103643293All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium583Open in IMG/M
3300010379|Ga0136449_104660698All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300011270|Ga0137391_10753962All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium805Open in IMG/M
3300011270|Ga0137391_11462126All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae529Open in IMG/M
3300011271|Ga0137393_10452838All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1100Open in IMG/M
3300012957|Ga0164303_11529818All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium505Open in IMG/M
3300013297|Ga0157378_10001236All Organisms → cellular organisms → Bacteria23120Open in IMG/M
3300013297|Ga0157378_10161413Not Available2096Open in IMG/M
3300014168|Ga0181534_10006457All Organisms → cellular organisms → Bacteria6532Open in IMG/M
3300014489|Ga0182018_10016929All Organisms → cellular organisms → Bacteria4926Open in IMG/M
3300015245|Ga0137409_11532252All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium516Open in IMG/M
3300015371|Ga0132258_12095231Not Available1422Open in IMG/M
3300015372|Ga0132256_103137298Not Available556Open in IMG/M
3300015374|Ga0132255_104236940Not Available608Open in IMG/M
3300016319|Ga0182033_11958498All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300016404|Ga0182037_11127239Not Available687Open in IMG/M
3300018007|Ga0187805_10600264Not Available520Open in IMG/M
3300018008|Ga0187888_1119485All Organisms → Viruses → Predicted Viral1105Open in IMG/M
3300018038|Ga0187855_10387199Not Available815Open in IMG/M
3300018468|Ga0066662_12664503All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300018482|Ga0066669_10135011All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1786Open in IMG/M
3300021178|Ga0210408_10109317All Organisms → cellular organisms → Bacteria2176Open in IMG/M
3300021180|Ga0210396_11771593Not Available500Open in IMG/M
3300021433|Ga0210391_10524384All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium930Open in IMG/M
3300025906|Ga0207699_10991469All Organisms → cellular organisms → Bacteria → Acidobacteria621Open in IMG/M
3300025916|Ga0207663_11591434All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium526Open in IMG/M
3300027570|Ga0208043_1151143Not Available605Open in IMG/M
3300027787|Ga0209074_10486603All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300027857|Ga0209166_10183304Not Available1131Open in IMG/M
3300027869|Ga0209579_10513642Not Available650Open in IMG/M
3300027889|Ga0209380_10063540All Organisms → cellular organisms → Bacteria → Proteobacteria2103Open in IMG/M
3300027905|Ga0209415_10815570Not Available648Open in IMG/M
3300027911|Ga0209698_10792060Not Available717Open in IMG/M
3300028381|Ga0268264_11079413Not Available811Open in IMG/M
3300028798|Ga0302222_10318106All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium607Open in IMG/M
3300029882|Ga0311368_10392654All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1023Open in IMG/M
3300029999|Ga0311339_10186190All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA32374Open in IMG/M
3300031231|Ga0170824_112327828Not Available700Open in IMG/M
3300031234|Ga0302325_12343272All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium643Open in IMG/M
3300031236|Ga0302324_100012358All Organisms → cellular organisms → Bacteria17420Open in IMG/M
3300031469|Ga0170819_10897667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300031708|Ga0310686_100084607All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium779Open in IMG/M
3300031716|Ga0310813_10100382All Organisms → cellular organisms → Bacteria2249Open in IMG/M
3300031720|Ga0307469_11260186Not Available701Open in IMG/M
3300031912|Ga0306921_11955840Not Available626Open in IMG/M
3300032160|Ga0311301_10369369All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2225Open in IMG/M
3300032160|Ga0311301_10750386All Organisms → cellular organisms → Bacteria1356Open in IMG/M
3300032160|Ga0311301_11029115All Organisms → cellular organisms → Bacteria1084Open in IMG/M
3300032174|Ga0307470_10195665All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1287Open in IMG/M
3300032205|Ga0307472_102014363All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium579Open in IMG/M
3300032261|Ga0306920_100608105All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin60761617Open in IMG/M
3300032770|Ga0335085_11009984Not Available898Open in IMG/M
3300032892|Ga0335081_10291640All Organisms → cellular organisms → Bacteria → Acidobacteria2168Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil14.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil7.92%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.92%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil6.93%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil5.94%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa4.95%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.97%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.97%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.97%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.97%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.98%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands1.98%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.98%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.98%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.98%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.98%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.98%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.98%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.99%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.99%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.99%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.99%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.99%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.99%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.99%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.99%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.99%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2035918004Soil microbial communities from sample at FACE Site 2 North Carolina CO2-EnvironmentalOpen in IMG/M
3300000567Peat soil microbial communities from Weissenstadt, Germany - SII-2010EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005537Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009167Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009524Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaGEnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009616Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018008Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40EnvironmentalOpen in IMG/M
3300018038Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027570Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027787Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028798Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_2EnvironmentalOpen in IMG/M
3300029882III_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029999I_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FACENCA_50278602035918004SoilTSQADCLTPVSCYHQTMPKRIPPDVLAYLRKVGQAYGSEKAAKNMTAEERSARAKKASDAAARKRTAARLARERAGRAKKSPKH
JGI12270J11330_10005006133300000567Peatlands SoilMATRMPKEVAEYLRKVGQAYGKLGGKAAARNMTPEERTARANKASQAAARKRTADRLARERAAKRN*
Ga0062389_10377662613300004092Bog Forest SoilMAKMPPEVLEYLRTIGKKYGKLGGKTSAESMTAAERSARAKKASLAAAKKRTAERLARERARRATKS*
Ga0070690_10077186713300005330Switchgrass RhizosphereMRSMAKRMPPEVLEYLKSMGKAYGKQGGKTAAQNMTAEERSARAKKASLAAARQRTAKRLAAASGKGVTKKPAKGKRARD*
Ga0066388_10485229313300005332Tropical Forest SoilMPKRMPPEVLAYLRAMGREYGKVGGKTAAKNLTAAQRSARARKASLAAAKKRTAERLTRERKAKR*
Ga0070709_1134363413300005434Corn, Switchgrass And Miscanthus RhizosphereMAKRIPPEVLEYLKTMGKAYGKLGGKTAAKNMTAAERRARAKKASIAAAKKRTTERLAREHAAKGKRSARAS*
Ga0070713_10152601713300005436Corn, Switchgrass And Miscanthus RhizosphereMAKRIPPEVLEYLKTMGKAYGKLGGKTAAKNMTAAERRARAKKASIAAAKKRTMERLAREHAAKGKRSARAS*
Ga0070708_10152222113300005445Corn, Switchgrass And Miscanthus RhizosphereMAKRMPPKVLEYLQTLGKRYGKLGGKMAAKNMTAQERSARAKKASIAAAKKRTEKRLAFESL
Ga0070708_10172748213300005445Corn, Switchgrass And Miscanthus RhizosphereRSMPKRMPPEVLEFLKGLGQQYGKLGGKKAARNMTPEERSARAKIASQAAARKRTAERLARERAKKSSKH*
Ga0070741_1016930633300005529Surface SoilMAKRIPPEALAYLKSLGKYGKLGGKKAAENMTPEERSERAKTASLAAAKKRTAERLARERKK*
Ga0070730_1003759133300005537Surface SoilMPPEVLEYLKTMGKAYGAFGGKTAAKNMTAEERKARAKKASLAAAGKRTTARLTRERAERAKKFPKN*
Ga0070731_1008334043300005538Surface SoilECLRTVGKAYGKLGGQTAARNLTAAERSARAKKASLAAAEQRTAKRLVKGIKREKKATRRK*
Ga0070731_1079379523300005538Surface SoilMATRMPREVAEYLRKIGQVYGKLGGKAAAKNMTPEERSARAKKASEAAAQKRTAQRLARERAKSAKRV*
Ga0070763_1073926213300005610SoilMAKIPPEVLEYLRTIGKKYGKLGGKTSAESMTAAERSARAKKASLAAAKKRTADRLARERTRRTKKS*
Ga0070764_1089157813300005712SoilMAKMPDEVLEYLRTMGKKYGKLGGKTSAKNLTAEERSARAKIGSLAAAKKRTAERLARQTGKGRIKTR*
Ga0066903_10526450013300005764Tropical Forest SoilMAKRIPAEVLEYLRGMGKAYGKLGGKKAARNMTPEERSARAKIASDAAARKRTAERLARERAAKAPRAKRPRKG*
Ga0068860_10018093953300005843Switchgrass RhizosphereVYAISMAKRMPPEVLAYLQRMGKEYGKLGGKASAKNMTPAQRSARAKKASLAAAKKRMAKRSK*
Ga0070717_1022032213300006028Corn, Switchgrass And Miscanthus RhizosphereMAKMPPEVLEYSKTMGKKYGKLGGKKSAASLTPEERSARAKKASLAAAKKRTAERLERE
Ga0075017_100007518123300006059WatershedsMAKMPPDVLEYLRAIGMKYGKLGGKTSAERLTPEERSARAKIASLAAAKKRTADRLERERKAKQTKKVTKP*
Ga0070716_10158887113300006173Corn, Switchgrass And Miscanthus RhizosphereMAKRIPPEVLEYLKTMGKAYGRLGGKTAAKNMTAAERRARAKKASIAAAKKRTTERLAREHAAKGKRSARAS*
Ga0079037_10041574913300006224Freshwater WetlandsMYDLGMRKRMPPEVLEYLKKMGKAYGGLGGKTAAQNMTPKQRSARAKKASLAAAKMRTAERLARLAKAKKNPGKKRSLGRQ*
Ga0079222_1002949833300006755Agricultural SoilMPKRMPPEVLEYLRSLGKKYGSQGGKTAAKNMTAEERLARASKASMAAAKKRTEKRLAAGAKRASRKIL*
Ga0066658_1064782913300006794SoilMAKRMPPGVLEYLRTMGKECGKLGGKTAAKNMTAAERKARAKKASDAAARKRTAARLARERAKKS
Ga0079220_1111785013300006806Agricultural SoilMPPEVLEYLRSLGKKYGSQGGKTAAKNMTAEERLARASKASMAAAKKRTEKRLAAGAKRASRKIL*
Ga0066710_10210742723300009012Grasslands SoilMAKRMPPEVLEYLQSVGKAYGKLGGKTAAKHMTADERSARAKKASMAAGKKRTERRLAAERATKHASKAAKEQ
Ga0099830_1133007123300009088Vadose Zone SoilLPYAIPILRKMGMAYGSQGGKKAAKNMTAEERSARAKKASLAAAKKRTAERLVRTALRAKRKGVTK*
Ga0099828_1156281723300009089Vadose Zone SoilMAKRMPPKVLEYLQTLGKRYGKLGGKTAAQNMTAQERSARAKKASISAAKKRTMERLAAASKRASKKPR*
Ga0099827_1017039533300009090Vadose Zone SoilLEYLRAIGKKYGQLGGKASAQSLTAVERSARAKKASLAAAKKRTAERLVREQKRKRAK*
Ga0113563_1356890513300009167Freshwater WetlandsMPPEVLEYLKKMGRAYGALGGKTAAQNMTPKQRSARAKKASLAAAKKRTAERLARLGKQSKTRAGGKKRS*
Ga0105242_1026038823300009176Miscanthus RhizosphereMAKRMPPEVLEYLQEIGRQYGKLGGKTAAKNLTAAERSARAKKASLAAAKKRTADRLERDSKRK*
Ga0116222_111775423300009521Peatlands SoilMPKEVAEYLRKVGQAYGKLGGKAAARNMTPEERTARANKASQAAARKRTADRLARERAAKRN*
Ga0116225_1000963163300009524Peatlands SoilMPKEVAEYLRKGGQAYGKLGGKAAARNMTPEERTARANKASQAAARKRTADRLARERAAKRN*
Ga0105237_1029251323300009545Corn RhizosphereMAIRMPKEAAEYLRKLGQAYGKLGGQTAAKNMTAEERSARAKKASTAAAAKRTDERLAAERARKRGKKGGR*
Ga0116111_108020613300009616PeatlandVYDETMAKRMPAEVLEYLRRMGKKYGSQGGKRSLETMTAEERSARAKIASLAAAKKRTADRLARERTRKRTPDRGKAK*
Ga0116219_1064648313300009824Peatlands SoilMPKRIPPEVLAYLRQMGKAYGSQGGKQAAKNMTAEERSARARKAAKAAAMKRTAKRL
Ga0126384_1172138913300010046Tropical Forest SoilMAKMPPEVLDYLQGLGKKFGSVGGKTAAKNMTAEERLARAKKASDAAARKRKAEGPARERAKRSTQR*
Ga0126373_1261837413300010048Tropical Forest SoilMSKRMPPEVLEYLRSMGKKYGAQGGKRSLATMTPEERSARAKKASLAAAKKRTAARLARERAKRSGR*
Ga0134071_1069947913300010336Grasslands SoilMPKRMPPKVLEYLRSVGQLYGKLGGQTAAKNMTAAERSARAKKAPIAAAKKRTAERLARKRATIRASNGRNPRLTRLDPD*
Ga0126370_1120838213300010358Tropical Forest SoilMARMPKEVAEYLRKLGQKYGKLGGQTAATNMTAEERSARAKKASDAAAKKRTASRLARGRATQSRKKH*
Ga0126378_1215918913300010361Tropical Forest SoilMIIGMAKRIPPEALAYLKSLGKYGKLGGKKAAENMTPEERSARAKKASLAAATKRTAERLERERRKR*
Ga0126377_1192777113300010362Tropical Forest SoilMSKRMPPEVLEYLRSMGKAYGKLGGKTAAKNMTPKERSARAKKASMAAAKKRTAKRLAASRRAGKPAK*
Ga0126377_1244127713300010362Tropical Forest SoilMAIRMPKEVREYLQKLGAKYGKLGGKKVARNMTPEERSARARKASRAAARKRTATRLGR
Ga0126379_1387185323300010366Tropical Forest SoilMSHKIPPEALAYLQSLGKKFGSLGGKTAAKNMTREERLARAKKASDAAARKLRAERLAREHGNSKKPK*
Ga0126381_10324360023300010376Tropical Forest SoilMTKRMPPEVLEYLRTMGKIYGRQGGKTAARNMTPEERSARAKKASKAAAKKRTAQRLARAAKKH
Ga0136449_10028591243300010379Peatlands SoilMPAEVLEYLREQGKKYGSVGGKKSARNMSPEDRSARAKKASEAAALRRTAARLERERAAKRRKH*
Ga0136449_10101488513300010379Peatlands SoilMAKMPDEVLEYLRSVGKKYGKLGGKTSAKNLTAEERSARAKKASLAAAKKRTADRLARAGGNGTTGKRAKKK*
Ga0136449_10261302513300010379Peatlands SoilMAKMPDEVLEYLRSVGKKYGKLGGKKSAASMTPEERSARAKKASLAAAKKRTADRLARAGGQGTT
Ga0136449_10359851223300010379Peatlands SoilMPKRIPPAVLRYLRKLGKTYGSQGGKKAAKNMTAEERWARAKKASMAAAKKRTVKRLARE
Ga0136449_10364329313300010379Peatlands SoilMANRMPPEVLEYLRSLGKKYGKRGGKTAAKNMTAAERLARAKKASMAAAKKRTAERLAR
Ga0136449_10466069813300010379Peatlands SoilPEVLAYLQNMGKTYGKLGGKTSAKNLTPEERSARAKIASDAAARKRTAERLARERQAKRK
Ga0137391_1075396223300011270Vadose Zone SoilMVKRMPPEALEYLKGLGQTYGKLGGKKAAKNMTPEERSARAKIASQAAARKRTAERLARERANKSSKH*
Ga0137391_1146212623300011270Vadose Zone SoilMAKRMPKEVAEYLRKVGQAYGKLGGKTAAKNMTAEERSARARKASIAASAKRTAKRIADERARAKKKR*
Ga0137393_1045283833300011271Vadose Zone SoilMSKRMPPEVLEYLKGLGQTYGKLGGKKAAKNMTPEERSARAKIASQAAARQRTAERLARERAKK
Ga0164303_1152981823300012957SoilMAKRMPPEVLEYFKGLGKYGKLGGKASALNLTPEERSARAKKASLAAAEKRTAKRL
Ga0157378_1000123633300013297Miscanthus RhizosphereMAKQMPPEVLEYLQEIGRQYGKLGGKTAAKNLSAAERSARAKKGSLAAAKKRTADRLARERQAAKRK*
Ga0157378_1016141323300013297Miscanthus RhizosphereMAKRMPPEVLEYLQEIGKQYGKLGGKTAAKNLTAAERSARAKKGSLAAAKKRTAERLARERQAAKRK*
Ga0181534_1000645733300014168BogMAKRMPPDVLEYLRAMGKTTGKLGGKTAARNMTPEERTARAKKASEAAARKRTAERLARERASKPAKRK*
Ga0182018_1001692963300014489PalsaMSMAKKMPREVLEYLRSAGKAYGKVGGKVAAQNMTPEERTARAKKASEAAARKRTAQRLVRERATKPAEHK*
Ga0137409_1153225213300015245Vadose Zone SoilMPPEAFEYRQSLGKKYGKLGGKTAAKNMTAEERSERAKKASLAAAMKRTAERLARERVAKRATKPRNQDEG
Ga0132258_1209523123300015371Arabidopsis RhizosphereMAIRMPKEVVAYLHKIGQEYGKLGGKKSAANMTPAQRKARATKASKAAAAKRTAARLERERQAREQR*
Ga0132256_10313729813300015372Arabidopsis RhizosphereMAIRMPKEVVAYLHKIGQEYGKLGGKKSAANMTPAQRKARAKKASKAAAAKRTAARLER
Ga0132255_10423694023300015374Arabidopsis RhizosphereMAIRMPKAVVAYLHKIGQEYGKLGGKKSAANMTPAQRKARAKKASKAAAAKRTAARLEREGMS
Ga0182033_1195849813300016319SoilMAKRMPPEVLEYLRKLGKSYGKLGGKKAAENMTPEERSARAKKASLAAAKKRTADRLARERKARRPNN
Ga0182037_1112723923300016404SoilVIAKRMPKEVAEYLRKLGQTYGKLGGKTAAKNMTAEERCARAKKTSDAAPAKRTAKRLARERRTRRSKRADP
Ga0187805_1060026413300018007Freshwater SedimentMLGYMVKMPAEVLEYLRAMGKKYGKLGGQTSAKNLTAAERSARAKKASLAAARRRTAERLERQRQAAKRK
Ga0187888_111948513300018008PeatlandMPSEVLEYLQSMGKTYGKIGGKVAARNMTPEERSARAKKASLVSARKRTVDRLARERARKRTADRGKAK
Ga0187855_1038719923300018038PeatlandMPKEVAVYLRKLGQEYGKLGGKTAAKNMTPEERTARAKKASEAAARKRTAQRLEREKAAKSKSS
Ga0066662_1266450313300018468Grasslands SoilMPQEVLEYLRSLGKAYGKLGGRTAARNMTPEERSARAKKASLAAAKKRTEQRLARLAAARAAKRPRKGK
Ga0066669_1013501123300018482Grasslands SoilMAKRMPPEVLEYLKTMGKAYGQLGGKTAAKNMTAAERKARAKKASMAAAKRRTAERLAREHEGKRGKKVSA
Ga0210408_1010931723300021178SoilMPPDVLEYLRSMGKKYGAEGGKRSLETMTAAERSARAKIASLAAAKKRTADRLARERQAKVSRRPPKRK
Ga0210396_1177159313300021180SoilAKMPAEVLEYLKRIGKKYGKLGGKTSAKNLTAAERSARAKIASLAAAKKRTAERIARERQATKRK
Ga0210391_1052438413300021433SoilMAKRMPPEVLEYLKGLGKTYGKLGGKTAAKNMTAAQRSARAKKASLAAAKKRTADRLARERKQKAR
Ga0207699_1099146923300025906Corn, Switchgrass And Miscanthus RhizosphereMAKRIPPEVLEYLKTMGKAYGKLGGKTAAKNMTAAERRARAKKASIAAAKKRTTERLAREHAAKGKRSARAS
Ga0207663_1159143413300025916Corn, Switchgrass And Miscanthus RhizosphereEVLAYLRKMGQAYGSQGGKKAAKNMTAAERSARAKKASFAAAWKRTAARLARERAERAKRSPKH
Ga0208043_115114313300027570Peatlands SoilIQFRQHLTPIRCYTLTMATRMPKEVAEYLRKVGQAYGKLGGKAAARNMTPEERTARANKASQAAARKRTADRLARERAAKRN
Ga0209074_1048660313300027787Agricultural SoilMPKRMPPEVLEYLRSLGKKYGSQGGKTAAKNMTAEERLARASKASMAAAKKRTEKRLAAGAKRASRKIL
Ga0209166_1018330423300027857Surface SoilMPPEVLEYLKTMGKAYGAFGGKTAAKNMTAEERKARAKKASLAAAGKRTTARLTRERAERAKKFPKN
Ga0209579_1051364213300027869Surface SoilMATRMPREVAEYLRKIGQVYGKLGGKAAAKNMTPEERSARAKKASEAAAQKRTAQRLARERAKSAKRV
Ga0209380_1006354013300027889SoilMAKRMPPEVLEYLRTMGKKYGSIGGKRSLKTMTAEERSARAKKASMAAAKKRTAER
Ga0209415_1081557013300027905Peatlands SoilMYHEGMAKRMPPEVLEYLRTMGRATGKLGGKTSAKNMTPEERSERARKASLAAAKKRTADRLARERAAKRTPERGKTK
Ga0209698_1079206013300027911WatershedsMPPDVLEYLRAIGMKYGKLGGKTSAERLTPEERSARAKIASLAAAKKRTADRLERERKAKQTKKAAKP
Ga0268264_1107941323300028381Switchgrass RhizosphereMAKRMPPEVLAYLQRMGKEYGKLGGKASAKNMTPAQRSARAKKASLAAAKKRMAKRSK
Ga0302222_1031810623300028798PalsaMPPEVLEYLRSMGRKYGSQGGKRSLETMTAAERSARAKKASDAAAKKRTAERLERERTAKGSKRK
Ga0311368_1039265423300029882PalsaMAKRMPPEVLEYLRSMGRKYGSQGGKRSLETMTAAERSARAKKASDAAAKKRTAERLERERTAKGSKRK
Ga0311339_1018619013300029999PalsaDGRMAKKMPPDVLEYLRSVGKAYGKVGGKAAARNMTPEERSARAKKASEAAARKRTAQRLAAERAAKPE
Ga0170824_11232782823300031231Forest SoilVSMAKRMPAEVLEYLREIGQKFGKQGGKKAAQNMTPEERSARAKIASLAAAKKRTAERLAREAKGTAKEK
Ga0302325_1234327213300031234PalsaMAKRMPPEVLEYLRSMGRKYGSQGGKRSLETMTAAERSARAKKASDAAAKKRTADRLA
Ga0302324_100012358143300031236PalsaMSMAKKMPREVLEYLRSAGKAYGKVGGKVAAQNMTPEERTARAKKASEAAARKRTAQRLVRERATKPAEHK
Ga0170819_1089766713300031469Forest SoilMPKRIPPEVLEYLRKLGKAYGSQGGKTAAKNMTAAERKARAKKASLAAARKRTAARLARERAKKSPKH
Ga0310686_10008460713300031708SoilMAKMPPEVLQYLQTIGKKYGKLGGKTSAGNLTAAERSARAKIASMAAAKKRTAERLERERKAAKRK
Ga0310813_1010038223300031716SoilMAKRIPPEVLAYLRKMGQAYGSQGGRIAAKNMTAAERQARAKKASLVAAQKRTAARLARERAERGRSTKR
Ga0307469_1126018623300031720Hardwood Forest SoilSIAQPAAKPPRCRNDPDRMPPEVFEYLKGLGQQYGKLGGKKAAKNMTPEERSARAKIASQAAARKRTAERLARERAKKSSKH
Ga0306921_1195584013300031912SoilMANRMPKEVAEYLQKLGQTYGKLGGKTAAENMTPEERSARAKKASEAAAKKRTAARLARERAASSRKRA
Ga0311301_1036936943300032160Peatlands SoilMPAEVLEYLREQGKKYGSVGGKKSARNMSPEDRSARAKKASEAAALRRTAARLERERAAKRRKH
Ga0311301_1075038643300032160Peatlands SoilMAKMPDEVLEYLRSVGKKYGKLGGKTSAKNLTAEERSARAKKASLAAAKKRTADRLARAGGNGTTGKRAKKK
Ga0311301_1102911513300032160Peatlands SoilMAKMPDEVLEYLRSVGKKYGKLGGKKSAASMTPEERSARAKKASLAAAKKRTADRLARAGGQGTTGKRAKKK
Ga0307470_1019566513300032174Hardwood Forest SoilMAKMPDEVLEYLRSVGKKYGKLGGKTSAKNLTAAERSARAKKASLAAAKKRTADRLEREGKKGN
Ga0307472_10201436313300032205Hardwood Forest SoilMRKRMPPEVLEYLQSVGKQYGKLGGKTAAKNMTAAERSARAKKASIAAAKKRTATRLAGERATKSITRK
Ga0306920_10060810523300032261SoilMAQKIPPEALAYLRGLGKKFGSLGGKTAARNMTPEERLARAKKASAAAARKRRVERLERERAKKSGKR
Ga0335085_1100998413300032770SoilMISIMSKRIPPEVLEYLRGLGKYGKLGGKAAAKNMTAAERSARAKKASLAAAKKRTAERLAREKRAKDGA
Ga0335081_1029164033300032892SoilMNGMAKMTAEVLEYLKAIGKKYGKLGGKTAAKNLTAAERSARAKKASLAAAKKRTAERLAREKRAKDRA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.