NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F103745

Metagenome / Metatranscriptome Family F103745

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F103745
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 97 residues
Representative Sequence VTENPSPVPPDPSSGRDVGKRLTGTAVGHIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADMIEQPPGR
Number of Associated Samples 77
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 69.00 %
% of genes near scaffold ends (potentially truncated) 41.58 %
% of genes from short scaffolds (< 2000 bps) 83.17 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (87.129 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(27.723 % of family members)
Environment Ontology (ENVO) Unclassified
(31.683 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(36.634 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 50.00%    β-sheet: 1.59%    Coil/Unstructured: 48.41%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF07992Pyr_redox_2 53.47
PF08031BBE 4.95
PF01638HxlR 2.97
PF13561adh_short_C2 1.98
PF13365Trypsin_2 1.98
PF01243Putative_PNPOx 1.98
PF00070Pyr_redox 0.99
PF12697Abhydrolase_6 0.99
PF00501AMP-binding 0.99
PF13302Acetyltransf_3 0.99
PF00723Glyco_hydro_15 0.99
PF06271RDD 0.99
PF04237YjbR 0.99

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 101 Family Scaffolds
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 4.95
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 2.97
COG1714Uncharacterized membrane protein YckC, RDD familyFunction unknown [S] 0.99
COG2315Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR familyTranscription [K] 0.99
COG3387Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 familyCarbohydrate transport and metabolism [G] 0.99


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms87.13 %
UnclassifiedrootN/A12.87 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005093|Ga0062594_100146501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1536Open in IMG/M
3300005329|Ga0070683_100221561All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1798Open in IMG/M
3300005330|Ga0070690_100199158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1393Open in IMG/M
3300005336|Ga0070680_101470678All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria590Open in IMG/M
3300005434|Ga0070709_10486978All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha935Open in IMG/M
3300005435|Ga0070714_100160685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2032Open in IMG/M
3300005435|Ga0070714_100613432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1045Open in IMG/M
3300005436|Ga0070713_100012643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia6202Open in IMG/M
3300005436|Ga0070713_100680338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia981Open in IMG/M
3300005436|Ga0070713_101090505All Organisms → cellular organisms → Bacteria → Terrabacteria group771Open in IMG/M
3300005439|Ga0070711_100022116All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4117Open in IMG/M
3300005439|Ga0070711_100756367All Organisms → cellular organisms → Bacteria → Terrabacteria group822Open in IMG/M
3300005458|Ga0070681_11580703All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria581Open in IMG/M
3300005548|Ga0070665_101156278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria785Open in IMG/M
3300005614|Ga0068856_100707742All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii1027Open in IMG/M
3300005764|Ga0066903_100583468All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1930Open in IMG/M
3300005764|Ga0066903_105593102All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300005841|Ga0068863_100915546All Organisms → cellular organisms → Bacteria878Open in IMG/M
3300006028|Ga0070717_10724920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia904Open in IMG/M
3300006028|Ga0070717_11351101Not Available647Open in IMG/M
3300006173|Ga0070716_101265422All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha595Open in IMG/M
3300006173|Ga0070716_101808265Not Available506Open in IMG/M
3300006175|Ga0070712_100035722All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3375Open in IMG/M
3300006175|Ga0070712_100823335All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria797Open in IMG/M
3300006175|Ga0070712_101863899All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia527Open in IMG/M
3300006806|Ga0079220_10354967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii934Open in IMG/M
3300006854|Ga0075425_100595457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1272Open in IMG/M
3300006854|Ga0075425_101070924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria919Open in IMG/M
3300009174|Ga0105241_11924667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea → Lentzea indica580Open in IMG/M
3300009545|Ga0105237_12175073Not Available564Open in IMG/M
3300010047|Ga0126382_10606374All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii902Open in IMG/M
3300010154|Ga0127503_11056781Not Available522Open in IMG/M
3300010358|Ga0126370_10940439All Organisms → cellular organisms → Bacteria → Terrabacteria group784Open in IMG/M
3300010360|Ga0126372_12888201Not Available532Open in IMG/M
3300010362|Ga0126377_11424108All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia766Open in IMG/M
3300010366|Ga0126379_13562101All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300010398|Ga0126383_10354858All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium1488Open in IMG/M
3300012987|Ga0164307_11066962Not Available661Open in IMG/M
3300012988|Ga0164306_11292903Not Available616Open in IMG/M
3300015371|Ga0132258_10205003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4786Open in IMG/M
3300016341|Ga0182035_10367402All Organisms → cellular organisms → Bacteria1200Open in IMG/M
3300016404|Ga0182037_10893706All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300016422|Ga0182039_11097257All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300016445|Ga0182038_10581221All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300017937|Ga0187809_10071288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1138Open in IMG/M
3300017970|Ga0187783_10150158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1716Open in IMG/M
3300018060|Ga0187765_10229955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1084Open in IMG/M
3300018085|Ga0187772_10033829All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3054Open in IMG/M
3300020581|Ga0210399_10048998All Organisms → cellular organisms → Bacteria3392Open in IMG/M
3300020581|Ga0210399_10613339All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia899Open in IMG/M
3300021560|Ga0126371_10091315All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3013Open in IMG/M
3300021560|Ga0126371_11454449All Organisms → cellular organisms → Bacteria815Open in IMG/M
3300021560|Ga0126371_11604324All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia777Open in IMG/M
3300021560|Ga0126371_11969387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium702Open in IMG/M
3300021560|Ga0126371_12447356All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300025905|Ga0207685_10213342All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300025915|Ga0207693_11037135All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300025928|Ga0207700_10025986All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4076Open in IMG/M
3300025928|Ga0207700_11903564All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300025929|Ga0207664_10030076All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4144Open in IMG/M
3300025939|Ga0207665_10206382All Organisms → cellular organisms → Bacteria1433Open in IMG/M
3300025939|Ga0207665_10790945All Organisms → cellular organisms → Bacteria749Open in IMG/M
3300026078|Ga0207702_10176576All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1963Open in IMG/M
3300026116|Ga0207674_10415791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1299Open in IMG/M
3300027855|Ga0209693_10489604All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea → Lentzea indica589Open in IMG/M
3300028379|Ga0268266_10393492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD00821309Open in IMG/M
3300029701|Ga0222748_1090767All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300031543|Ga0318516_10004045All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6437Open in IMG/M
3300031543|Ga0318516_10751397All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea → Lentzea indica552Open in IMG/M
3300031572|Ga0318515_10237242All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Cryobacterium978Open in IMG/M
3300031573|Ga0310915_10314891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1107Open in IMG/M
3300031681|Ga0318572_10127539All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1457Open in IMG/M
3300031708|Ga0310686_107962193All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300031713|Ga0318496_10185677All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300031713|Ga0318496_10501810Not Available671Open in IMG/M
3300031723|Ga0318493_10032970All Organisms → cellular organisms → Bacteria2367Open in IMG/M
3300031723|Ga0318493_10054841All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1898Open in IMG/M
3300031723|Ga0318493_10133137All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300031723|Ga0318493_10808299All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea → Lentzea indica528Open in IMG/M
3300031736|Ga0318501_10008655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3820Open in IMG/M
3300031751|Ga0318494_10316464Not Available901Open in IMG/M
3300031764|Ga0318535_10270179All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia761Open in IMG/M
3300031765|Ga0318554_10099035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1638Open in IMG/M
3300031819|Ga0318568_10916449Not Available542Open in IMG/M
3300031832|Ga0318499_10091944All Organisms → cellular organisms → Bacteria1169Open in IMG/M
3300031879|Ga0306919_10027707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3529Open in IMG/M
3300031890|Ga0306925_10383060All Organisms → cellular organisms → Bacteria1509Open in IMG/M
3300031945|Ga0310913_10280143All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300031981|Ga0318531_10377743All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia641Open in IMG/M
3300032009|Ga0318563_10506627All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300032041|Ga0318549_10005389All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4139Open in IMG/M
3300032067|Ga0318524_10135843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1237Open in IMG/M
3300032067|Ga0318524_10757658Not Available513Open in IMG/M
3300032068|Ga0318553_10169330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1135Open in IMG/M
3300032205|Ga0307472_101669225All Organisms → cellular organisms → Bacteria628Open in IMG/M
3300032261|Ga0306920_103013626All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300032783|Ga0335079_10230917Not Available2042Open in IMG/M
3300032828|Ga0335080_11266264All Organisms → cellular organisms → Bacteria738Open in IMG/M
3300032828|Ga0335080_12124791All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300033158|Ga0335077_12076623All Organisms → cellular organisms → Bacteria526Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil27.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere18.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil10.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.93%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.97%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.97%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.97%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil2.97%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.97%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.98%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.98%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.98%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.98%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.99%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.99%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.99%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.99%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.99%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.99%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.99%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.99%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031572Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031681Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031723Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031751Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24EnvironmentalOpen in IMG/M
3300031764Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031832Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032009Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19EnvironmentalOpen in IMG/M
3300032041Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032068Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062594_10014650123300005093SoilSPVPADPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSDGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIEQTGPRRPDGP*
Ga0070683_10022156113300005329Corn RhizosphereVTENSSPVPQEPPSRGRDVGKRLAGTTVGRLTDQARQTTGAARAGRVLNRDGEPGVLDLTPLRELLNEFVDELGQLRLRDRIAAALRQAADIIEQAPRKPDKS*
Ga0070690_10019915823300005330Switchgrass RhizosphereVTENSSPVPADPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSDGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIEQTGPRRPDGP*
Ga0070680_10147067813300005336Corn RhizosphereVTENSSPVPADPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSDGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAAL
Ga0070709_1048697823300005434Corn, Switchgrass And Miscanthus RhizosphereVTENSSPVPPDPPPSSMVVGKRLAGTTVGRLTDQARQTTGAARARRVLNSDGEPGVLDLTPLRQLLSEFMDELSQLRLRDRVAGALRQAADIIEQGPSKPDKS*
Ga0070714_10016068523300005435Agricultural SoilVTENSSPVPADPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKARRVLNSDGEPGVLDLTPVRELLAEFMDELSQLRLRDRIAAALRQAADIIEQGGPRRPDGP*
Ga0070714_10061343223300005435Agricultural SoilVTENSSPVPPDPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSEGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIEKAEPRRPDGP*
Ga0070713_10001264353300005436Corn, Switchgrass And Miscanthus RhizosphereVTENSSPVPADPPSSSRDVGKRLAGTTVGRLTDQARQTTGAAKARRVLNSDGEPGVLDLTPVRELLAEFMDELSQLRLRDRIAAALRQAADIIEQGGPRRPDGP*
Ga0070713_10068033813300005436Corn, Switchgrass And Miscanthus RhizosphereRLAGTTVGRLTDQARQTTGAAKAGRVLNSEGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIENAEPRRPDGP*
Ga0070713_10109050523300005436Corn, Switchgrass And Miscanthus RhizosphereVTENSSPVPPDPPSGSRDIGKRLAGTTVGRLTDQARQTTDAAKARRVLNSEGEPGVLDLTPMRELLAEFMNELSQLRLRDRIAAALRQAADVIEQGGPRRPEGP*
Ga0070711_10002211653300005439Corn, Switchgrass And Miscanthus RhizosphereLTENSSPVPPDPPAPSVEVGKRLAGTAVGRLADQARQTTDAAKARRVLNSDGEPGVLDLTPLRELLAEFMGELSQLRLRDRVAATLRQAADIIEQGPRRPDRS*
Ga0070711_10075636713300005439Corn, Switchgrass And Miscanthus RhizosphereVTENSSPVPADPPSSSRDVGKRLAGTTVGRLTDQARQTTGAAKARRVLNSDGEPGVLDLTPMRELLAEFMDELSQLRLRDRIAAALRQAADIIEQGGPRRPDGP*
Ga0070681_1158070313300005458Corn RhizosphereVTENSSPVPADPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSDGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADII
Ga0070665_10115627813300005548Switchgrass RhizosphereVTENSSPVPADPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSDGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIEQGPSKPDKS*
Ga0068856_10070774233300005614Corn RhizosphereSVTENSSPVPQEPPSRGRDVGKRLAGTTVGRLTDQARQTTGAARAGRVLNRDGEPGVLDLTPLRELLNEFVDELGQLRLRDRIAAALRQAADIIEQAPRKPDKS*
Ga0066903_10058346823300005764Tropical Forest SoilVTENTSPVPPDPPSSRDVGRRLAGTAVGRIADQARQTTDAAKAGRVVNSNGEPGMLDLTPLRELLAEFMDELSRLRLRDRVAAALRQAADIIEQPPGR*
Ga0066903_10559310213300005764Tropical Forest SoilVTENSSPVPPDLPSSSRDVGKRLAGTTVSRLTDQARQTTGAAKARRVLNSDGEPGVLDLTPMRELLAEFMDELNKLRLRDRIAAALRQAADVIEQGGPRRPDRS*
Ga0068863_10091554613300005841Switchgrass RhizosphereGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSDGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIEQTGPRRPDGP*
Ga0070717_1072492013300006028Corn, Switchgrass And Miscanthus RhizosphereSSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSEGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIENAEPRRPDGP*
Ga0070717_1135110123300006028Corn, Switchgrass And Miscanthus RhizosphereVTENSSPVPADPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKARRVLNSDGEPGVLDLTPMRELLAEFMDELSQLRLRDRIAAALRQAADIIEQGGPRRPDGP*
Ga0070716_10126542223300006173Corn, Switchgrass And Miscanthus RhizosphereMVVGKRLAGTTVGRLTDQARQTTGAARARRVLNSDGEPGVLDLTPLRQLLSEFMDELSQLRLRDRVAGALRQAADIIE
Ga0070716_10180826523300006173Corn, Switchgrass And Miscanthus RhizosphereLTENSSPVPPDPPAPSMEVGKRLAGTAVGRLADQARQTTDAAKARRVLNSDGEPGVLDLTPLRELLAEFMGELSQLRLRDRVAATLRQAADIIEQGPRRPDRS*
Ga0070712_10003572253300006175Corn, Switchgrass And Miscanthus RhizosphereMEVGKRLAGTAVGRLADQARQTTDAAKARRVLNSDGEPGVLDLTPLRELLAEFMGELSQLRLRDRVAATLRQAADIIEQGPRRPDRS*
Ga0070712_10082333523300006175Corn, Switchgrass And Miscanthus RhizosphereVTENSSPVPPDPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSEGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIENAEPRRPDGP*
Ga0070712_10186389913300006175Corn, Switchgrass And Miscanthus RhizosphereGSVTENSSPVPPDPPSSSRDVGKRLAGTAVGRLTDQARQTTSAAKARRVTNSDGEPGVLDLTPLRELLAELMDELSHLRLRDRIAAALRQAADIIEQDGPRRPDGP*
Ga0079220_1035496713300006806Agricultural SoilPPSGMVVGKRLAGATVGRLTDQARQTTGAARARRVLNSDGEPGVLDLTPLRELLSEFMGELSQLRLRDRIAGALRQAADIIEQAPRKTDKS*
Ga0075425_10059545733300006854Populus RhizosphereVTENSSPVPPDPPPSSRDVGKRLAGTAVGRLTDQARQTTGAAKARRVLNSDGEPGVLDLTPLRELLAEFVDELSHLRLRDRIAAALRQAADII
Ga0075425_10107092423300006854Populus RhizosphereVTENSSPVPPDPPSSSRDVGKRLAGTTVGRLTDQARQTTSAARARRVTNSDGEPGVLDLTPLRELLAELMDELSHLRLRDRIAAALRQAADIIEQDGPRRPDRP*
Ga0105241_1192466713300009174Corn RhizosphereVTENSSPVPPDPPSRSRDVGKRLAGTTVGRLTDQARQTTGAARARRVLNSDGEPGVLDLTPLRELLAEFMGELSQLRLRDRVAATLRQAADIIEQGPRRPDRS*
Ga0105237_1217507313300009545Corn RhizosphereMVVGKRLAGTTVGRLTDQARQTTGAARARRVLNSDGEPGVLDLTPLRQLLSEFMDELSQLRLRDRIAAALRQAADIIEQAPRKPDKS*
Ga0126382_1060637423300010047Tropical Forest SoilVTENSSPVPSDPPPSSRDVGKRLAGTTVGRLADQARQTTGAARARRVLNSDGEPGVLDLTPMRELLAEFMDELNQLRLRDRIAAALRQAADIIEQGGPRKPGKS*
Ga0127503_1105678113300010154SoilVTENSSPVPPDPPASSRDIGKRLAGTTVGRLGDQARQTTGAAKAGRVLNSDGEPGVLDLTPLRDLLAEFMDELSQLRLRDRVAAALRQAADIIEQAGPRRPDGP*
Ga0126370_1094043923300010358Tropical Forest SoilVTENSSPVPPDPPSSGRDVGKRLAGSTVGRITDQARQTTSAAMAGRVMNSNGEPGVLDLTPLRELLGEFMDELSQLRLRDRIAAALRQAADVIEQGGPRKPDKP*
Ga0126372_1288820113300010360Tropical Forest SoilVTENSSPVPPDPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKARRVLNSDGEPGVLDLTPMRELLAEFMDELNKLRLRDRIAAALRQAADIIEQPPRKPDKP*
Ga0126377_1142410823300010362Tropical Forest SoilSVTENSSPVPPDPPSSGRDVGKRLAGSTVGRLSDQARQTTSAAMAGRVVSSDGEPGVLDLTPLRELLAEFMNELSQLRVRDRIAAALRQAADVIEQGGPRKPDKP*
Ga0126379_1356210113300010366Tropical Forest SoilRDVGRRLAGTAVGRLTDQARQTSDAAKAGRVMNSDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIAQALRQAADIIEQKPGR*
Ga0126383_1035485823300010398Tropical Forest SoilMDVGRRLTGTAVGHIYDQARQTTTAAKAGRVVNTGGEPGMLDLTPLRELLAELMDELGRLRLRDRIARALRQAADIIEQPPGR*
Ga0164307_1106696213300012987SoilMVVGKRLAGTTVGRLTDQARQTTGAARARRVLNSDGEPGVLDLTPLRQLLSEFMDELSQLRLRDRVAGALRQAADIIEQGPSKPDKS*
Ga0164306_1129290323300012988SoilSVTENSSPVPPDPPSSSRDISKRLAGTTVGRLTDQARQTTGAAKAGRVLNSDGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIEQTGPRRPDGP*
Ga0132258_1020500313300015371Arabidopsis RhizosphereMVVGKRLAGATVGRLTDQARQTTGAARARRVLNSDGEPGVLDLTPLRELLSEFMGELSQLRLRDRIA
Ga0182035_1036740223300016341SoilVTENPSPVPPDPSSGMDVGRRLTGTAVGHIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADMIEQPPGR
Ga0182037_1089370623300016404SoilSPIPPDPSSGMDVGRRLTGTAVGRIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADMIEQPPGR
Ga0182039_1109725713300016422SoilTTDISRPAGRSAFRGANGGSVTENPSPVPPDPSSGMDVGRRLTGTAVGHIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADMIEQPPGR
Ga0182038_1058122123300016445SoilVTENPSPVPPDPSSGRDVGKRLTGTAVGHIYDQARQTTSAAKAGRVVNADGEPGMLDLTPMRELFAEFMDELAQLRLRDRIARALRQAADMIEQSGP
Ga0187809_1007128823300017937Freshwater SedimentVTENPLPDPPTGMDVGRRLTGTAVGRIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELFAEFVDELGQLRLRDRIARALRQAADIIEQAPGG
Ga0187783_1015015823300017970Tropical PeatlandVTSIRPVIAVSENPAPVPPDPPSGVDVGRLTGTAVGRIYDQARRTASAARAGRVTNTDGEPGVLDLTPMRELLAELMDELAQLRLRDRIANALRQAADIIDSQTPSR
Ga0187765_1022995523300018060Tropical PeatlandVTENPSPVPPDPSSGMDVGRRLTGTAVGRIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELFAEFVDELGQLRLRDRLARALRQAADMIEQTPGG
Ga0187772_1003382923300018085Tropical PeatlandVTENSSPVPPDPPPGGMDVGRLTGTAVGRLYDQARRTASAAKAGRVTNSDGEPGVLDLTPMRELLADLVDELAQLRLRDRIAHALRQAADIIDSQTPSR
Ga0210399_1004899843300020581SoilVTENISPVPPDPPSSRDVGRRLAGTAVGRIADQARQTTDAAKAGRMTNSDGEPGVLDLTPLRELLAEFVDELGKLRLRDRVAAALRQAADIIEQTGR
Ga0210399_1061333913300020581SoilVTENTSPVPPDPPPSSREVGRRLAGTAVGRIADQARQTSDAAKAGRMTNSDGEPGVLDLTPLRELLAEFVDELGKLRLRDRVAAALRQAADIIEQSGR
Ga0126371_1009131553300021560Tropical Forest SoilVTENTSPVPPDPPSSRDVGRRLAGTAVGRIADQARQTTDAAKAGRVVNSNGEPGMLDLTPLRELLAEFMDELSRLRLRDRVAAALRQAADIIEQPPGR
Ga0126371_1145444913300021560Tropical Forest SoilVTENPSPVPDPSSGRDAGRRLTGTAVGRIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPMRELFAEFMDELSQLRLRDRIAQALRQAADMIEQSGH
Ga0126371_1160432413300021560Tropical Forest SoilVTDNTSSAPPDPPPSSRDVGRRLAGTAVGRLTDQARQTSDAAKAGRVMNSDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIAQ
Ga0126371_1196938713300021560Tropical Forest SoilVTDSTPPVPPDPPSGMDVGRRLTGTAVGHIYDQARQTTSAAKAGRVVNTEGEPGMLDLTPLRELLAELMDELGRLRLRDRIARALRQAADIIEQAPGR
Ga0126371_1244735623300021560Tropical Forest SoilSRDVGKRLAGTTVSRLTDQARQTTGAAKARRVLNSDGEPGVLDLTPMRELLAEFVDELNKLRLRDRIAAALRQAADVIEQGGPRRPDRS
Ga0207685_1021334213300025905Corn, Switchgrass And Miscanthus RhizosphereVTENSSPVPPDPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSEGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIEQTGPRRPDGP
Ga0207693_1103713523300025915Corn, Switchgrass And Miscanthus RhizosphereVTENSSPVPPDPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSEGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIENAEPRRPDGP
Ga0207700_1002598653300025928Corn, Switchgrass And Miscanthus RhizosphereMEVGKRLAGTAVGRLADQARQTTDAAKARRVLNSDGEPGVLDLTPLRELLAEFMGELSQLRLRDRVAATLRQAADIIEQGPRRPDRS
Ga0207700_1190356413300025928Corn, Switchgrass And Miscanthus RhizosphereADPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSDGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIEQTGPRRPDGP
Ga0207664_1003007653300025929Agricultural SoilVTENSSPVPPDPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSEGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIEKAEPRRPDGP
Ga0207665_1020638223300025939Corn, Switchgrass And Miscanthus RhizosphereLAGTTVGRLTDQARQTTGAAKAGRVLNSDGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIEQTGPRRPDGP
Ga0207665_1079094523300025939Corn, Switchgrass And Miscanthus RhizosphereVTENSSPVPADPPSSSRDVGKRLAGTTVGRLTDQARQTTGAAKARRVLNSDGEPGVLDLTPLRELLAEFMGELSQLRLRDRVAATLRQAADIIEQGPRRPDRS
Ga0207702_1017657633300026078Corn RhizosphereVTENSSPVPQEPPSRGRDVGKRLAGTTVGRLTDQARQTTGAARAGRVLNRDGEPGVLDLTPLRELLNEFVDELGQLRLRDRIAAALRQAADIIEQAPRKPDKS
Ga0207674_1041579143300026116Corn RhizosphereVTENSSPVPQEPPSRGRDVGKRLAGTTVGRLTDQARQTTGAARAGRVLNRDGEPGVLDLTPLRELLNEFVDELGQLRLRDRIAAALRQAADIIEQPPGKPDKP
Ga0209693_1048960413300027855SoilAAGFPFRAVAGGSVTENISPVPPDPPSSRDVGRRLAGTAVGRIADQARQTTDAAKAGRMTNSDGEPGVLDLTPLRELLAEFVDELGKLRLRDRVAAALRQAADIIEQTGR
Ga0268266_1039349213300028379Switchgrass RhizosphereVTENSSPVPADPPSSSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSDGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQ
Ga0222748_109076713300029701SoilRRFAFRAAGFPFRAAAGGSVTENTSPVPPDPPSSRDVGRRLAGTAVGRIADQARQTTDAAKAGRMTNSDGEPGVLDLTPLRELLAEFVDELGKLRLRDRVAAALRQAADIIEQTGR
Ga0318516_1000404553300031543SoilVTENPSPVPPDPSSGRDVGKRLTGTAVGHIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADMIEQPPGR
Ga0318516_1075139723300031543SoilVTENTSPVSPDPPSSRDVGRRLAGTAVGRIADQARQTTDAAKAGRVVNTNGEPGMLDLTPLRELFAEFMDELGRLRLRDRVAAALRQAADMIEQPPGR
Ga0318515_1023724223300031572SoilVTENTSPVPPDPPPSSRDVGKRLAGTAVGRIADQARQTTDAAKAGRMTNSEGEPGVLDLTPLRELLAEFMDEISKLRLRDRVAAALRQAADMIEQTG
Ga0310915_1031489123300031573SoilVTENPSPVPPDPSSGRDVGKRLTGTAVGHIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADIIEETPGG
Ga0318572_1012753923300031681SoilVTENPSPVPPDPSSGRDVGKRLTGTAVGHIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADLIEQPPGR
Ga0310686_10796219313300031708SoilVTENSSPIPPDPPTGMDVGKRLTGTAVGRIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPMRELLADLADELGKLRLRDRIARALRQAADIIEQTPGG
Ga0318496_1018567723300031713SoilVTENPSPVPPDPSSGMDVGRRLTGTAVGHIYDQARQTTSAAKAGRVVNADGEPGMLDLTPMRELFAEFMDELAQLRLRDRIARALRQAADMIEQSGR
Ga0318496_1050181013300031713SoilVTENTSPVPPDPPPSSRDVGKRLAGTAVGRIADQARQTTDAAKAGRMTNSEGEPGVLDLTPLRELLAEFMDEISKLRLRDRVAAALRQAADMIEQPPGR
Ga0318493_1003297043300031723SoilVTENPSPIPPDPSSGMDVGRRLTGTAVGRIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRD
Ga0318493_1005484123300031723SoilVTENTSPVPPDPPPSSRDVGKRLAGTAVGRIADQARQTTDAAKAGRMTNSEGEPGVLDLTPLRELLAEFMDEISKLRLRDRVAAALRQAADMIEQTGR
Ga0318493_1013313713300031723SoilPSPVPPDPSSGMDVGRRLTGTAVGHIYDQARQTTSAAKAGRVVNADGEPGMLDLTPMRELFAEFMDELAQLRLRDRIARALRQAADMIEQSGR
Ga0318493_1080829923300031723SoilVTENTSPVSPDPPSSRDVGRRLAGTAVGRIADQARQTTDAAKAGRVVNTNGEPGMLDLTPLRELFAEFMDELSRLRLRDRVAAALRQAADMIEQPPGR
Ga0318501_1000865543300031736SoilVTENPSPVPPDPSSGMDVGRRLTGTAVGHIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADIIEETPGG
Ga0318494_1031646423300031751SoilVTENPSPVPPDPSSGMDVGRRLTGTAVGHIYDQARQTTSAAKAGRVVNADGEPGMLDLTPMRELFAEFMDELAQLRLRDR
Ga0318535_1027017923300031764SoilVTENPSPVPPDPSSGRDVGKRLTGTAVGHIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADMIE
Ga0318554_1009903523300031765SoilVTENTSPVPPDPPPSSRDVGKRLAGTAVGRIADQARQTTDAAKAGRMTNSDGEPGMLDLTPLRELLAEFMDEISKLRLRDRVAAALRQAADMIEQTGR
Ga0318509_1051891813300031768SoilRLTGTAVGHIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADMIEQPPGR
Ga0318568_1091644913300031819SoilVTENTSPVPPDPPPSSRDVGKRLAGTAVGRIADQARQTTDAAKAGRMTNSEGEPGVLDLTPLRELLAEFMDEISKLRLRDRVAAALRQAADMIE
Ga0318499_1009194423300031832SoilVTENPSPVPPDPSSGRDVGKRLTGTAVGHIYDQARQTTSAAKAGRVVNTDGDPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADMIEQPPGR
Ga0306919_1002770753300031879SoilKRLTGTAVGHIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADMIEQPPGR
Ga0306925_1038306013300031890SoilPPDPPPSSRDVGKRLAGTAVGRIADQARQTTDAAKAGRMTNSEGEPGVLDLTPLRELLAEFMDEISKLRLRDRVAAALRQAADMIEQTGR
Ga0310913_1028014313300031945SoilIPPDPSSGMDVGRRLTGTAVGRIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADMIEQPPGR
Ga0318531_1037774313300031981SoilMDVGRRLTGTAVGRIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADMIEQPPGR
Ga0318563_1050662723300032009SoilENPSPVPPDPSSGMDVGRRLTGTAVGHIYDQARQTTSAAKAGRVVNADGEPGMLDLTPMRELFAEFMDELAQLRLRDRIARALRQAADMIEQSGR
Ga0318549_1000538913300032041SoilVTENPSPVPPDPSSGRDVGKRLTGTAVGHIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADDDHLVPSAGHGAT
Ga0318524_1013584313300032067SoilVTENPSPVPPDPSSGMDVGRRLTGTAVGHIYDQARQTTSAAKAGRVVNADGEPGMLDLTPMRELFAEFMDELAQLRLRDRIARALRQAADMIEQS
Ga0318524_1075765823300032067SoilVTENTSPVSPDPPSSRDVGRRLAGTAVGRIADQARQTTDAAKAGRVVNTNGEPGMLDLTPLRELFAEFMDELSRLRLRDRVAAALRQAADM
Ga0318553_1016933033300032068SoilVTENPSPIPPDPSSGMDVGRRLTGTAVGRIYDQARQTTSAAKAGRVVNTDGEPGMLDLTPLRELLAEFMDELSQLRLRDRIARALRQAADIIEETPGG
Ga0307472_10166922523300032205Hardwood Forest SoilSRDIGKRLAGTTVGRLTDQARQTTGAAKAGRVLNSEGEPGVLDLTPLRELLAEFMDELSHLRLRDRIAAALRQAADIIEQTGPRRPDGP
Ga0306920_10301362613300032261SoilAFRGANGGSVTENPSPVPPDPSSGMDVGRRLTGTAVGHIYDQARQTTSAAKAGRVVNADGEPGMLDLTPMRELFAEFMDELAQLRLRDRIARALRQAADMIEQSGR
Ga0335079_1023091713300032783SoilVPFPFATSVEPVIAVSENPSPVPPDPPRSVDVGRLTGTAVGHIYDQARRTASAAKAGRVTNTDGEPGVMDLTPLRELLAELVDELAQLRLRDRIANALRQAADIIDSQAPSG
Ga0335080_1126626423300032828SoilVTENTPPVPPDPFSSMDVGRRLTGTAVGHIYDQARQTTNAAKAGRVVNADGEPGMLDLTPLRELLAELMDELGRLRLRDRVARALRQAADIIEQAPGR
Ga0335080_1212479123300032828SoilTENPSPVPPDPSSGMDVGRRLTGTAVGRIADQARQTTSAAKAGRMVNTDGEPGMLDLTPLRELFAEFMDELSQLRLRDRIARALRQAADLIEQPPGH
Ga0335077_1207662323300033158SoilVTENTPPVPPDPPSSMDVGRRLTGTAVGHIYDQARQTTNAAKAGRVVNADGEPGMLDLTPLRELLAELMDELGRLRLRDRVARALRQAADIIEQAPGR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.