Metagenome / Metatranscriptome Family F103762

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103762
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	47 residues
Representative Sequence	MILLITPSATGPQCAESLYAATGQETHWAQSLQEAATRLREQTFSAAVI
Number of Associated Samples	93
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.30 %
% of genes near scaffold ends (potentially truncated)	99.01 %
% of genes from short scaffolds (< 2000 bps)	92.08 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.208 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (7.921 % of family members)
Environment Ontology (ENVO)	Unclassified (19.802 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.525 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.57% β-sheet: 0.00% Coil/Unstructured: 71.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.53
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.53
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF02954	HTH_8	91.09
PF02518	HATPase_c	2.97
PF00158	Sigma54_activat	1.98
PF01790	LGT	0.99
PF03743	TrbI	0.99
PF13561	adh_short_C2	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	0.99
COG2948	Type IV secretory pathway, VirB10 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.21 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.21 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.21 %
Unclassified	root	N/A	20.79 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	75.25 %
Unclassified	root	N/A	20.79 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	49.50 %
Unclassified	root	N/A	20.79 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.87 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	49.50 %
Unclassified	root	N/A	20.79 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	12.87 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	49.50 %
Unclassified	root	N/A	20.79 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.87 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	49.50 %
Unclassified	root	N/A	20.79 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	1.98 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.99 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.99 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	49.50 %
Unclassified	root	N/A	20.79 %
Occallatibacter savannae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1.98 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.99 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664022\|INPgaii200_c0982487	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1157	Open in IMG/M
3300000567\|JGI12270J11330_10093003	Not Available	1355	Open in IMG/M
3300001174\|JGI12679J13547_1002561	Not Available	996	Open in IMG/M
3300001686\|C688J18823_10414605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	870	Open in IMG/M
3300002568\|C688J35102_119631205	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300004101\|Ga0058896_1362663	Not Available	1381	Open in IMG/M
3300005176\|Ga0066679_10524961	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300005177\|Ga0066690_10021369	All Organisms → cellular organisms → Bacteria → Acidobacteria	3612	Open in IMG/M
3300005179\|Ga0066684_10057934	All Organisms → cellular organisms → Bacteria	2248	Open in IMG/M
3300005533\|Ga0070734_10408666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300005542\|Ga0070732_10430093	Not Available	797	Open in IMG/M
3300005563\|Ga0068855_100314288	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1733	Open in IMG/M
3300005614\|Ga0068856_101989099	Not Available	592	Open in IMG/M
3300005874\|Ga0075288_1012038	Not Available	1161	Open in IMG/M
3300006086\|Ga0075019_10334773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	917	Open in IMG/M
3300006162\|Ga0075030_101175924	Not Available	603	Open in IMG/M
3300006173\|Ga0070716_100828023	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	719	Open in IMG/M
3300006175\|Ga0070712_101762614	Not Available	542	Open in IMG/M
3300007076\|Ga0075435_101596438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300009012\|Ga0066710_101581135	Not Available	1006	Open in IMG/M
3300009143\|Ga0099792_11095690	All Organisms → cellular organisms → Bacteria → Acidobacteria	536	Open in IMG/M
3300009522\|Ga0116218_1158231	Not Available	1028	Open in IMG/M
3300009616\|Ga0116111_1085668	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	820	Open in IMG/M
3300009623\|Ga0116133_1096351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300009635\|Ga0116117_1045847	Not Available	1076	Open in IMG/M
3300009698\|Ga0116216_10830716	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300009764\|Ga0116134_1263559	Not Available	594	Open in IMG/M
3300010360\|Ga0126372_12606649	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300010379\|Ga0136449_102604290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300011120\|Ga0150983_12499183	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300012206\|Ga0137380_10136198	All Organisms → cellular organisms → Bacteria	2241	Open in IMG/M
3300012357\|Ga0137384_11239963	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300012582\|Ga0137358_10808248	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300014159\|Ga0181530_10534455	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300014969\|Ga0157376_13139684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300015264\|Ga0137403_11127140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300016445\|Ga0182038_10710949	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300016750\|Ga0181505_10136996	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300017823\|Ga0187818_10060047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1636	Open in IMG/M
3300017928\|Ga0187806_1115190	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300017933\|Ga0187801_10171837	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	851	Open in IMG/M
3300017933\|Ga0187801_10230772	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300017933\|Ga0187801_10324461	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300017934\|Ga0187803_10197401	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	793	Open in IMG/M
3300017943\|Ga0187819_10853105	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300017966\|Ga0187776_10525914	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	813	Open in IMG/M
3300017970\|Ga0187783_10942707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	622	Open in IMG/M
3300017975\|Ga0187782_10002197	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	14333	Open in IMG/M
3300017995\|Ga0187816_10526558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300018016\|Ga0187880_1272520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	738	Open in IMG/M
3300018468\|Ga0066662_11322721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	740	Open in IMG/M
3300018468\|Ga0066662_12865479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300021180\|Ga0210396_10609942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	948	Open in IMG/M
3300021180\|Ga0210396_10894520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300021401\|Ga0210393_11034100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	664	Open in IMG/M
3300021401\|Ga0210393_11659905	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300021407\|Ga0210383_10675874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300021433\|Ga0210391_10526157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300021476\|Ga0187846_10257599	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300025412\|Ga0208194_1072663	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300025434\|Ga0208690_1025711	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300025922\|Ga0207646_11865048	Not Available	513	Open in IMG/M
3300025928\|Ga0207700_10177864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1779	Open in IMG/M
3300025929\|Ga0207664_11361783	Not Available	630	Open in IMG/M
3300025993\|Ga0208415_1032950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300026335\|Ga0209804_1112141	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter savannae	1244	Open in IMG/M
3300027045\|Ga0207726_1033251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	730	Open in IMG/M
3300027575\|Ga0209525_1059782	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300027616\|Ga0209106_1146799	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300027625\|Ga0208044_1090985	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300027629\|Ga0209422_1025054	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1478	Open in IMG/M
3300027821\|Ga0209811_10442848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300027826\|Ga0209060_10417130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300027842\|Ga0209580_10087753	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1494	Open in IMG/M
3300027842\|Ga0209580_10579658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300027857\|Ga0209166_10138527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1333	Open in IMG/M
3300027867\|Ga0209167_10433871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300027895\|Ga0209624_10055131	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2549	Open in IMG/M
3300027898\|Ga0209067_10382980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	785	Open in IMG/M
3300027905\|Ga0209415_10077194	All Organisms → cellular organisms → Bacteria → Acidobacteria	3880	Open in IMG/M
3300027905\|Ga0209415_10833718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300027911\|Ga0209698_11153352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300028759\|Ga0302224_10236080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300028776\|Ga0302303_10206223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300030503\|Ga0311370_10111185	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3853	Open in IMG/M
3300030520\|Ga0311372_11004371	Not Available	1101	Open in IMG/M
3300030580\|Ga0311355_11598058	All Organisms → cellular organisms → Bacteria → Acidobacteria	560	Open in IMG/M
3300030737\|Ga0302310_10198213	Not Available	1175	Open in IMG/M
3300030737\|Ga0302310_10558829	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300030969\|Ga0075394_11129040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300030991\|Ga0073994_12416087	Not Available	1298	Open in IMG/M
3300031057\|Ga0170834_105212935	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	900	Open in IMG/M
3300031241\|Ga0265325_10417493	Not Available	587	Open in IMG/M
3300031247\|Ga0265340_10043453	All Organisms → cellular organisms → Bacteria	2203	Open in IMG/M
3300031753\|Ga0307477_10103918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1975	Open in IMG/M
3300031823\|Ga0307478_10334097	Not Available	1246	Open in IMG/M
3300032160\|Ga0311301_11861685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300032770\|Ga0335085_12023188	Not Available	584	Open in IMG/M
3300032805\|Ga0335078_10890095	Not Available	1071	Open in IMG/M
3300032892\|Ga0335081_10448626	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1641	Open in IMG/M
3300032897\|Ga0335071_11324468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.06%
Host-Associated	Host-Associated	5.94%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	73.27%
Aquatic	Environmental → Aquatic	20.79%
Plants	Host-Associated → Plants	5.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	65.35%
Freshwater	Environmental → Aquatic → Freshwater	16.83%
Peat	Environmental → Terrestrial → Peat	6.93%
Sediment	Environmental → Aquatic → Sediment	3.96%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.98%
Cave	Environmental → Terrestrial → Cave	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.58%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	16.83%
Loam	Environmental → Terrestrial → Soil → Loam	14.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.91%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.98%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	11.88%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.91%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	7.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.93%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	5.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.97%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	7.92%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	7.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.92%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.93%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	6.93%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	5.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.95%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.97%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.97%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.98%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.99%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.99%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001174	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004101	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF228 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009635	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025434	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10 (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025993	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300027045	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 40 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027616	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028759	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030737	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N1_2	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_09824872	2228664022	Soil	MILLITPQSKGPEFAAALLAATSQEVHWAQTLREA
JGI12270J11330_100930032	3300000567	Peatlands Soil	MILLITPSASGPQCADSLRAATSRETHWAKTLQEGATRLREQTYSAA
JGI12679J13547_10025611	3300001174	Forest Soil	MILLITSSAKGPQCIDCLHAATGLETQWAQSLQEAATRLREQTYSAVVID
C688J18823_104146051	3300001686	Soil	MEEVMILLITPQSRGPEFASSLEAATSQETHWAQNLQEAATRLREQTY
C688J35102_1196312052	3300002568	Soil	MEEVMILLITPQSRGPEFASSLEAATSQETHWAQNLQEAATRLREQTYSAAV
Ga0058896_13626632	3300004101	Forest Soil	MILLITPSARGPQCADSLKAATGEETHWAQNAHAASTHLRQQS
Ga0066679_105249611	3300005176	Soil	MILLITPQSKGPEFAAALLAATSQETHWAQNLQEAATRLREQTYSAAIIDQFL
Ga0066690_100213691	3300005177	Soil	MILLITPQSKGPEFAAALLAATSQETHWAQNLQEAATRLR
Ga0066684_100579341	3300005179	Soil	MILLITPSSRGPECAACLTAETSQETHWAQSLQAAATHLREE
Ga0070734_104086661	3300005533	Surface Soil	MILLITPQARGPECAEALFAATSQEVHWAPSLKEAATRLRE
Ga0070732_104300931	3300005542	Surface Soil	MILLITSSARGQQCVDALKASTGKDTHWAQTLQEAASRLREQTY
Ga0068855_1003142881	3300005563	Corn Rhizosphere	MILLITPSSRGPECAACLTAETSQETHWAQSLQAAATRLREETYAVAVIDQLLLETE
Ga0068856_1019890992	3300005614	Corn Rhizosphere	MILLITPSARGPECTQCLFAETSQETHWAQSLQEGVTHLREQA
Ga0075288_10120382	3300005874	Rice Paddy Soil	MILLITPSARGPECTQCLFAETSQETHWAQSVQEGVTHLREQAYVVAVID
Ga0075019_103347733	3300006086	Watersheds	MILLITPQSKGPEFVAALFAATSQETHWAQNLQEAAT
Ga0075030_1011759242	3300006162	Watersheds	MILLITASARGQQCADSLQAATGEETHWAQNLQEAATRLREQTYTAAVID
Ga0070716_1008280231	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MILLITPQSKGPEFAAALLAATSQETHWAQNLQEAATHLREQTYSA
Ga0070712_1017626141	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MVKIMILLITPQSRGPEFADALLAATSQETHWAQNLQEASTRLREQTYSAA
Ga0075435_1015964381	3300007076	Populus Rhizosphere	MILLITPQSRGPELARLINEATSQETHWAQSVQQASTQLRENAYSAAVIDQFLL
Ga0066710_1015811352	3300009012	Grasslands Soil	MILLITPQSKGPEFAAALLAATSQETHWAQNLQEAATRLREQTYSAA
Ga0099792_110956902	3300009143	Vadose Zone Soil	MILLITPSARGQQCVEALKAATGRETHWAQNLPEAATRMRQQTYSAAVIDQFLVETEPEE
Ga0116218_11582311	3300009522	Peatlands Soil	MGKGMILLITSSASGPQCADSLYVATGQETHWAPNL
Ga0116111_10856682	3300009616	Peatland	MILLITSSASGPQCADALGAATGLETHWAHTLQEAATRLREQ
Ga0116133_10963512	3300009623	Peatland	MILLITPSAGGPQCAEALHAATSQDVHWAQTLQEGA
Ga0116117_10458471	3300009635	Peatland	MILLNTPSASGPQCAESLRAATGQETHWAQTLQEAASRLREQTYSAAVIDQ
Ga0116216_108307161	3300009698	Peatlands Soil	MILLITPSASGPQCADSLRAATSRETHWAKTLQEGATR
Ga0116134_12635592	3300009764	Peatland	MILLITPSANGPQCADSLRAATGRETHWAKSLQEAATRLR
Ga0126372_126066491	3300010360	Tropical Forest Soil	MILLITPQSKGPEFSDALFAATTQETHWARNLQQAATRLREQPYAVAVI
Ga0136449_1026042902	3300010379	Peatlands Soil	MGKGMILLITSSASGPKCAESLYVATGQETHWAPTLQAA
Ga0150983_124991832	3300011120	Forest Soil	MILLITSSASGPQCADSLLAATSQETHWAQTVQQAATRLREQTYTAAV
Ga0137380_101361981	3300012206	Vadose Zone Soil	MILLITSSSSGPQCADSLYAATGQETQWAHTLQEAATRLREQTYSAAVIDQFLLEND
Ga0137384_112399632	3300012357	Vadose Zone Soil	MILLITSSASGSQCADSLYSATGQKTDWAQSLQEGATHLREQAYSAAVI
Ga0137358_108082482	3300012582	Vadose Zone Soil	MILLITSSARGQQCADTLKVATGNDTHWAQNLQEATTRLREQTYSAAVIVQFILATEPEE
Ga0181530_105344551	3300014159	Bog	MILLITPSARGQQCAESLHSATGKETRWAQNLQQAVTLLREQAYSAAVIDQFLLETE
Ga0157376_131396841	3300014969	Miscanthus Rhizosphere	MILLITPSARGPECTQCLFAETSQETHWAQSLQEGVTHLREQAYAVA
Ga0137403_111271401	3300015264	Vadose Zone Soil	MILLITPSARGQQCVDALKVATGNDTHWAQTLQEAAG
Ga0182038_107109491	3300016445	Soil	MILLITPQSRGPELARLINEATSQETDWAQTVQQAATQLRENAYSAVVIDQFVLETEPDEGD
Ga0181505_101369962	3300016750	Peatland	MILLVTPSANGPQCVETLRAATGQETHWAKNLQEAATRLREQTYSAAVIDQFLLET
Ga0187818_100600472	3300017823	Freshwater Sediment	MILLITPSANGQQCAESLYAATGQDTHWAQTLQEGATRLREQ
Ga0187806_11151901	3300017928	Freshwater Sediment	MILLITPQSKGPEFAAALFAATSQETHWAQNLQEAARRLREQTY
Ga0187801_101718372	3300017933	Freshwater Sediment	MILLITPQSRGPECATALFAATSQETTWVSTLQEAATRLREQTY
Ga0187801_102307721	3300017933	Freshwater Sediment	MILLVTPSARGQQFADSLHAATGEETHWAETPQQAATRLREQTYSAAVIDQF
Ga0187801_103244612	3300017933	Freshwater Sediment	MILLITPSATGPQCAESLYAATGQETHWAQSLQEAATRLREQTFSAAVI
Ga0187803_101974012	3300017934	Freshwater Sediment	MILLITPSANGQQCAESLYAATGQDTHWAQTLQEGA
Ga0187819_108531051	3300017943	Freshwater Sediment	MILLITPSATGPQCAESLYAATGQETHWAQSLQEAATCLREQTFSAAVIDQF
Ga0187776_105259141	3300017966	Tropical Peatland	MILLITPSARGQQCADSLQAATGEETRWAQNLQEAATRLREGSYSA
Ga0187783_109427072	3300017970	Tropical Peatland	MGKGMILLITPLARGQECAQTLQAATGEETCWAKTLQEATTSLREQ
Ga0187782_100021971	3300017975	Tropical Peatland	MSMILLITPSARGQQCSESLHAATGEETHWAQKLQDAATRLRQDT
Ga0187816_105265581	3300017995	Freshwater Sediment	MILLITPSANGQQCAESLYAATGQDTHWAQTLQEG
Ga0187880_12725202	3300018016	Peatland	MILLITPSARGQQCAESLHSATGKETRWAQNLQQAVTLLREQAYSAAVIDQFLL
Ga0066662_113227212	3300018468	Grasslands Soil	MILVITSSASGRQCAEAIGAATGRVTQWASSLQQAVTSLREQTYSAAV
Ga0066662_128654792	3300018468	Grasslands Soil	MILLITPSASGAECAEALQAATSRETHWATTLQEAATRL
Ga0210396_106099421	3300021180	Soil	MILLITPSANGPQCAETLRTATGRETHWAKNLQEAAARLREQTYSAAVIDQFLL
Ga0210396_108945202	3300021180	Soil	MILLITSSASGPQCAESLGVATGQETHWAPTLQAAATRLREQTYSAAVI
Ga0210393_110341002	3300021401	Soil	MILLITPSANGPQCVEILRAATGRETHWAKNLHEAATRLREQTYSAAVIYQFLV
Ga0210393_116599052	3300021401	Soil	MILLITSSASGPQCAESLGVATGQETHLAPTLQAAA
Ga0210383_106758741	3300021407	Soil	MILLITSSATGTQCAESLHAATSQDVHWAQTPQDGAARLREQVYSVAVIDQFLLET
Ga0210391_105261571	3300021433	Soil	MILLITPSARGQQCADSLNVATGLSTHWAHNLQEAATRLREQTY
Ga0187846_102575991	3300021476	Biofilm	MILLITPSARGPECADSLQAATGRETHWAQTLQAAANR
Ga0208194_10726632	3300025412	Peatland	MRKGMILVITPSASGPQCCDSLHAATGQETYWAKTLQEASSRLREQTYSTAVIDQFLLET
Ga0208690_10257111	3300025434	Peatland	MILLNTPSASGPQCAESLRAATGQETHWAQTLQEAASRLREQTYSAAV
Ga0207646_118650482	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MILLITSSANGPQCADSLHAATGQETQWAQTLQEAATRLREQTYTAAV
Ga0207700_101778642	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MILLITPSSRGPECAACLTAETSQETHWALSLQAAATRLR
Ga0207664_113617832	3300025929	Agricultural Soil	MILLITPQSRGPELASLVQANTSQETQWAQTVQEAATRLRERPYSAAIIDQFLLET
Ga0208415_10329502	3300025993	Rice Paddy Soil	MILLITPSARGPECTQCLFAETSQETHWAQSVQEGVTHL
Ga0209804_11121411	3300026335	Soil	MILLITPQSKGPEFAAALLAATSQETHWAQNLQEAA
Ga0207726_10332512	3300027045	Tropical Forest Soil	MILLITPSASGLQCASSLLAATGRETHWAQTLHDAATRLREQLYSAAVIDQF
Ga0209525_10597822	3300027575	Forest Soil	MILLITPSARGQQCADSLNVATGLSTHWAHNLQEAATRLREQTYVAVVVD
Ga0209106_11467991	3300027616	Forest Soil	MILLITPSARGQQCVDTLQAATGRETHWAQNLAEAVTRLRQQTYSAAVIDQFLIETE
Ga0208044_10909852	3300027625	Peatlands Soil	MILLITPSASGPQCADSLRAATSRETHWAKTLQEGATRLREQTYSA
Ga0209422_10250543	3300027629	Forest Soil	MILLITSSAKGPQCIDCLHAATGLETHWAQSLQEAATRLREQTYSAVVIDQF
Ga0209811_104428482	3300027821	Surface Soil	MRAMEMVMILLITPQSKGPEFAAALLAATSQETHWAQSLQEAATRLREQTYSAAVIDQF
Ga0209060_104171301	3300027826	Surface Soil	MILLITSSASGPQCIESLHAATSQEIHWAHTLQEAAAHLRE
Ga0209580_100877532	3300027842	Surface Soil	MILLITSSARGPECVDSLRAATGLETHWAQSLQEAATRLREQTYSA
Ga0209580_105796581	3300027842	Surface Soil	MILLITSSAKGPQCVDSLRAATGLETHWAQSLQEAATRLREQTYSAVVIDQFLL
Ga0209166_101385271	3300027857	Surface Soil	MILLITSSARGQQCADSLHAATGQETHWAQSLQEGATRLREQTYSAAVIDQF
Ga0209167_104338711	3300027867	Surface Soil	MILLITPSVRGHECADALQLATGDETHWAHILQEAATRLREQNYTAVIIDQF
Ga0209624_100551311	3300027895	Forest Soil	MGMILLITSSANGPQCAESLRSATGLETHWAQTLQEAATRLREQTYSA
Ga0209067_103829801	3300027898	Watersheds	MILLITPQSKGPEFAGALFAATSQETHWAQNLQEAATRLREQTYSAAVIDQF
Ga0209415_100771941	3300027905	Peatlands Soil	MILLITSSASGPKCVESLYVATGQETHWAPTLQAAATRLR
Ga0209415_108337182	3300027905	Peatlands Soil	MGKGMILLITSSASGPKCAESLYVATGQETHWAPTLQAAATRLR
Ga0209698_111533521	3300027911	Watersheds	MILLITPSARGQQCADALNAATGLETQWAQNLQQAATRLREQTFIAVVIDQFL
Ga0302224_102360801	3300028759	Palsa	MILLNTPSSSGLQCAESLHAATGQETHWAKTLQEAATRLREHTYSAAVIDQFLLET
Ga0302303_102062231	3300028776	Palsa	MILLITPSARGQECADALQLATGDQTHWAHILQEAATRLREQNYSAVIIDQ
Ga0311370_101111855	3300030503	Palsa	MILLITPSARGQQCADSLNVATSLQTHWAQNLQEGVAR
Ga0311372_110043711	3300030520	Palsa	MILLITSSARGEDCSSAVHDATGQETQWVQSIGEAATRLR
Ga0311355_115980582	3300030580	Palsa	MILLITSSARGEDCSSAVHDATGQETQWVQSIGEAATRLREQTYSAAVIDQFL
Ga0302310_101982131	3300030737	Palsa	MILLNTPSSSGLQCAESLHAATGQETHWAKTLQEAATRLREHTYSAAVIDQF
Ga0302310_105588293	3300030737	Palsa	MGMILLITPSARGQQCADSLNVATSLQTHWAQNLQEGVARLREQTYTAAVIDQFLL
Ga0075394_111290401	3300030969	Soil	MILLITSSANGPQCADALHAATGQETQWVQSLQEASTRLREQTYTAAVIDQFLL
Ga0073994_124160872	3300030991	Soil	MILLITPSARGQQCVDTLQAATGRETHWAQNLAEAVTRLRQQTYSTAVIDQFLIETEPEK
Ga0170834_1052129352	3300031057	Forest Soil	MILLVTSSASGPQCVEALHAATGQETQWAQTLQEAATRLREQ
Ga0265325_104174931	3300031241	Rhizosphere	MILLITPSASGPKCAESLKAATGQETHWAQSLQEASTRLREQ
Ga0265340_100434533	3300031247	Rhizosphere	MILLITPSANGQQCADSLYAATGQETHWAQTLQAGSTRLREQTY
Ga0307477_101039182	3300031753	Hardwood Forest Soil	MSFTASACGQRCADSLQAATGKDTHWAQNLQEAATRLREQTYTARVID
Ga0307478_103340972	3300031823	Hardwood Forest Soil	MILLITSSANGPQCAESLHAATGQETHWAQTLQAAATRLREQTY
Ga0311301_118616852	3300032160	Peatlands Soil	MILLITASARGQQCADSLLAATGEDTHWAQNLQEAATRLREQTYTAAVID
Ga0335085_120231881	3300032770	Soil	MILLITPQSRGPELARLIHEATSQETHWVQSVQQAASQLRENAYSAAVIDQFLLETDPDESD
Ga0335078_108900951	3300032805	Soil	MILLITSSSVGFQCAETLYGETGQETHWAKSLQEAVTHLRERTY
Ga0335081_104486261	3300032892	Soil	MILLITSSATGAQCAEAIHAATSQETHWAKTLQEAATR
Ga0335071_113244681	3300032897	Soil	MILLITPSARGQQCADSLNAATGRETHWAQNLQEAATRLREQTYSAAVIDQFLLETEPEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103762

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences