Metagenome / Metatranscriptome Family F103768

Basic Information
Family ID	F103768
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	48 residues
Representative Sequence	IRPGGEIAYVSGTGAGKIAVLDLRSWKMQPPIDLTPGVDGLAWVGAAH
Number of Associated Samples	82
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.99 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Most Common Taxonomy
Group	Unclassified (99.010 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (41.584 % of family members)
Environment Ontology (ENVO)	Unclassified (41.584 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.574 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 23.68% Coil/Unstructured: 76.32%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF12850	Metallophos_2	36.63
PF07963	N_methyl	5.94
PF00034	Cytochrom_C	4.95
PF03551	PadR	2.97
PF07238	PilZ	1.98
PF12704	MacB_PCD	0.99
PF00596	Aldolase_II	0.99
PF07690	MFS_1	0.99
PF13544	Obsolete Pfam Family	0.99
PF13633	Obsolete Pfam Family	0.99
PF14117	DUF4287	0.99
PF01408	GFO_IDH_MocA	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.97
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.97
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.97

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
All Organisms	root	All Organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
cellular organisms	root	All Organisms → cellular organisms	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	99.01 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Scaffold	Taxonomy	Length	IMG/M Link
3300026332\|Ga0209803_1014693	All Organisms → cellular organisms → Bacteria → Acidobacteria	4009	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.09%
Aquatic	Environmental → Aquatic	8.91%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.09%
Thermal Springs	Environmental → Aquatic → Thermal Springs	3.96%
Freshwater	Environmental → Aquatic → Freshwater	2.97%
Sediment	Environmental → Aquatic → Sediment	1.98%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.17%
Loam	Environmental → Terrestrial → Soil → Loam	6.93%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	3.96%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.98%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.99%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.49%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.83%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.94%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	3.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.98%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.99%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.99%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	41.58%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.95%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	3.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.97%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.98%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.98%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.99%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.99%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459003	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004104	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004139	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027671	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032722	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18027	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4A_04041150	2170459003	Grass Soil	TGAGKIGVIDLRSWKMQLPIDLTPGVDGLAWLPASH
JGI1027J12803_1052253192	3300000955	Soil	PARSSEILIRPGGDIAYISGTGAGKIAVLDLHSWQMQPPIDLTPGVDGLAWILVAEGK*
JGI12053J15887_102663804	3300001661	Forest Soil	GTGAGRIAVLDLRSWEMQQPIELTPGVDGLAWIPATRSN*
JGI25382J43887_100891721	3300002908	Grasslands Soil	SGTGAGKIAVLDLRAWEMQQSIELTPGVDGLAWIPATHER*
JGI25390J43892_100855632	3300002911	Grasslands Soil	VSGTGAGKIAVLDLLSWKMEPPIDLTPGVDGMVWVGAPH*
Ga0062387_1006662391	3300004091	Bog Forest Soil	GSSEILVRPGGDIAYVSGTGAGKIAVLDLRSWEMQPTIDLTPGVDGLAWLPASH*
Ga0058891_10258392	3300004104	Forest Soil	LIRPGGDIAYVSGTGAGKIAVLDLRSWKMRPPIDLTPGVDGLAWLPASH*
Ga0058897_111615831	3300004139	Forest Soil	EIAYVSGTGAGKIAVLDLRAWKMQPPIDLTPGVDGLAWLPDSH*
Ga0066684_100891341	3300005179	Soil	ISDGASEILIRPGRDVAYLSGTGAGKIDVLDLHTWELQKPIELTAGVDGMSWLPGGAK*
Ga0066675_101348314	3300005187	Soil	RSSEILIRPDGNIAYVSGTGAGKIAVLDLLSWKLEPPIDLTPGVDGMVWVSASR*
Ga0066689_101695063	3300005447	Soil	TRSSEILIRPGGEIAYISGTGAGKIAVLDLRAWEMQQSIELTPGVDGLAWIPATHER*
Ga0066689_103036431	3300005447	Soil	RPDGNIAYVSGTGAGKIGVLDLLSWKLEPPIDLTPGVDGMVWVSASR*
Ga0066692_102030641	3300005555	Soil	NIAYVSGTGAGKIGVLDIRSWKLLPPIDLTPGVDGMVWVSASR*
Ga0066706_105215241	3300005598	Soil	EIAYVSGTGAGKIAVLDLRSWKLQPPIDLTQGVDGLAWVSAAH*
Ga0066652_1013140142	3300006046	Soil	GIAYVSGTGAGKIAVLDLLSWKMEPPIDLTPGVDGMVWVGAPH*
Ga0075030_1002657541	3300006162	Watersheds	IPERSSEILIRPSGDIAYVSGTGAGKIAVLDLHSWKMQPPIDLTPGVDGLAWLPASH*
Ga0070716_1006933642	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VPERSSEILIRPGGEIAYVSGTGAGKIAVLDLRSWIMQPPIDLTPGVDGLAWVPASH*
Ga0075021_105653392	3300006354	Watersheds	SGTGAGKIGVLDLRAWKMQPPIDLTPGVDGLAWLPVSH*
Ga0066658_106380482	3300006794	Soil	VEILIRPDGELAYVSGTGAGKIAVLDVRSWKLLPPIDLTPGVDGMVWVSASH*
Ga0073928_102288201	3300006893	Iron-Sulfur Acid Spring	TAFISCVSAGKIAVLDLRAWQLQQPIVLTPGVDGLAWMPVNTGDKQR*
Ga0073928_102993491	3300006893	Iron-Sulfur Acid Spring	TAFISCVSAGKIAVLDLRAWQLQQPIVLTPGVDGLAWMPVNPGNKQR*
Ga0099794_100237611	3300007265	Vadose Zone Soil	ILIRPGGEIAYVSGTGAGKIAVLDLRSWKMQPPIDLTPGVDGLAWVGAAH*
Ga0099829_112916301	3300009038	Vadose Zone Soil	PGGEMAYISGTGAGKIAILDLRSWETQQPIELTPGVDGLAWIPATRSN*
Ga0099830_103471541	3300009088	Vadose Zone Soil	AGEIAYVSGTGAGKIAVLDLRSWKMEPPIELTPGVDGLAWAHAPH*
Ga0099830_117469261	3300009088	Vadose Zone Soil	PDGEIAYVSGTGAGKIAVLDLRSWKMQQPIDLTPGVDGLAWVRTSH*
Ga0099828_106150821	3300009089	Vadose Zone Soil	VSGTGAGKIAVLDLRSWKMQQPIDLTPGVDGLAWASALR*
Ga0099827_107747021	3300009090	Vadose Zone Soil	SEILIRPGGDIAYISGTGDGKIAVLDLRSWNMQSPIELTPGVDGLAWVPVHQK*
Ga0134109_102156701	3300010320	Grasslands Soil	RSSEILIRPGGEIAYVSGTGAGRIAVLDLRSWIMQPPIDLTPGVDGLAWVAASH*
Ga0126376_123407002	3300010359	Tropical Forest Soil	EGASEILIRPGGDVAYISGTGEGKIDVLNLHSWELEKPIELTPGVDGLAWLPVGTK*
Ga0126372_112175662	3300010360	Tropical Forest Soil	RPGGDIAYISGTGAGKIDVLDLHTWELQKPIELTPGVDGLAWLPTEAK*
Ga0126379_123872572	3300010366	Tropical Forest Soil	SDGASEILIRPGGDIAYLSGTGAGKIEVLDLHTWELQKPIELTAGVDGMSWLPAGTR*
Ga0136449_1023943851	3300010379	Peatlands Soil	RPGGEMAYVSGTGAGKIAVLDLRSWEMQPPIDLTPGVDGLAWLPASH*
Ga0126383_130167552	3300010398	Tropical Forest Soil	SDGASEILVRPGGDLAYISGTGAGKIDVLELHTWELQKPIELTPGVDGLAWLPTNAK*
Ga0126383_134930681	3300010398	Tropical Forest Soil	PGGDVAYLSGTGAGKIDVLDLRTWQLGKPIELTPGVDGMSWLPAGAR*
Ga0150983_104432351	3300011120	Forest Soil	EILVQPGGEVAFVSGTKAGKIAVLNLHSWEMQEPIELTPGVDGLAWASSTPK*
Ga0150983_154885831	3300011120	Forest Soil	TGAGKIAVLDLRSWKMQPTIDLTPGVDGLAWLPASH*
Ga0137392_103361053	3300011269	Vadose Zone Soil	PGGDIAYISGTGDGKIAVLDLRSWNMQSPIELTPGVDGLAWMPIHQK*
Ga0137391_103086363	3300011270	Vadose Zone Soil	SLEIPERSSEILIRPGGEIAYVSGTGAGKIAVLDVRSWKMQPPIDLTPGVDGLAWVSAAH
Ga0137391_108887991	3300011270	Vadose Zone Soil	RPGGDIAYISGTGDGKIAVLDLRSWNMQSPIELTPGVDGLAWVPVHQK*
Ga0137393_102069681	3300011271	Vadose Zone Soil	RPGGKTAYISGTAAGKIAVLDLGTWEMQPPINLTPGVDGLAWASAAH*
Ga0137393_105575001	3300011271	Vadose Zone Soil	EIAYVSGTGAGKIAVLDLRSWKMQPPIDLTPGVDGLAWVGAAY*
Ga0137393_112746191	3300011271	Vadose Zone Soil	KSSEILIRPGGEIAYVSGTGAGKIAVLDLCSWKMQQPIDLTPGVDGLAWVPAPH*
Ga0137389_111378922	3300012096	Vadose Zone Soil	GGGKIAVLDLRSWKMQPPIDLTPGVDGLAWVRAAY*
Ga0137364_114019801	3300012198	Vadose Zone Soil	IAYVSGTGAGKIAVLDLRSWIMQPPIDLTPGVDGLAWVPASH*
Ga0137383_113231892	3300012199	Vadose Zone Soil	EILIRPGGDIAYISGTGDGKIAVLDLRSWNMQSPIELTPGVDGLAWVPVHQK*
Ga0137382_103434281	3300012200	Vadose Zone Soil	GTGAGKIAVLDLPSWTMQQPIELTPGVDGLAWVTAPH*
Ga0137399_106762241	3300012203	Vadose Zone Soil	LEVPERSSEILIRPGGEIAYVSGTGAGKIAVLDLRSWIMQPPIDLTPGVDGLAWVPASH*
Ga0137381_115829542	3300012207	Vadose Zone Soil	GGDIAYISGTGDGKIAVLDLRSWNMQSPIELTPGVDGLAWMPVHQK*
Ga0137379_117626191	3300012209	Vadose Zone Soil	KNSSEILIRPGGDIAYISGTGDGKIAVLDLRSWNMQSPIELTPGVDGLAWVPVHQK*
Ga0137370_108113631	3300012285	Vadose Zone Soil	RSSEILIRPGGEIAYVSGTGAGRIAVLDLRSWIMQPPIDLTPGVDGLAWVPASH*
Ga0137387_111951731	3300012349	Vadose Zone Soil	IAYISGTGDGKIAVLDLRSWNMQSPIELTPGVDGLAWVPIHQK*
Ga0137386_105267161	3300012351	Vadose Zone Soil	DGKIAVLDLRSWNMRSPIELTPGVDGLAWMPVHQK*
Ga0137386_105304551	3300012351	Vadose Zone Soil	IRPGGDIAYISGTGDGKIAVLDLRSWNMQSPIELTPGVDGLAWVPVHQK*
Ga0137385_113906402	3300012359	Vadose Zone Soil	EILIRPGGDIAYISGTGDGKIAVLDLRSWNMQSPIELTPGVDGLAWMPVHQK*
Ga0137361_100970366	3300012362	Vadose Zone Soil	PERSSEILIRPGGEIAYISGTGAGKIAVLDLRSWKMQPPIDLTPGVDGLAWVSAPH*
Ga0137361_110345191	3300012362	Vadose Zone Soil	DVKIAVLDLRSCNMQSPIELTPGVDGLAWVPVHQK*
Ga0137390_112411872	3300012363	Vadose Zone Soil	GDGKIAVLDLRSWNMQSPIELTPGVDGLAWVPVHQK*
Ga0137390_115136852	3300012363	Vadose Zone Soil	GKEIAYVSGTGAGKIAVLDLRSWKMLPPIDLTPGVDGLAWAPAPH*
Ga0137358_110338652	3300012582	Vadose Zone Soil	SEILIRPGGEIAYISGTGAGKIAVLDLRAWEMQQSIELTPGVDGLAWIPATRSN*
Ga0137358_110908611	3300012582	Vadose Zone Soil	IRPGGEIAYISGTGAGKIAVLDLRAWEMQQSIELTPGVDGLAWIPATHER*
Ga0137398_101093843	3300012683	Vadose Zone Soil	LIRPGGEIAYVSGTGAGKIAVLDLRSWKMQPPIDLTPGVDGLAWVGAAH*
Ga0137359_114333801	3300012923	Vadose Zone Soil	IRPGGEIAYISGTGAGKIAVLDLRAWEMQQSIELTPGVDGLAWIPATRSN*
Ga0137419_107343051	3300012925	Vadose Zone Soil	EILIRPGGEIAYISGTGAGKIAVLNLRAWEMQQSIELTPGVDGLAWIPATHER*
Ga0137419_108435891	3300012925	Vadose Zone Soil	EILIRPGGEIAYISGTGAGKIAVLNLRAWEMQQPIELTPGVDGLAWIPATRSN*
Ga0134079_106444761	3300014166	Grasslands Soil	GAGKIAMLDLRSWKLLPPIDLTPGVDGMVWVSASH*
Ga0134112_101274041	3300017656	Grasslands Soil	ILIRPDGEIAYVSGTGAGKIAALDLRSWKMQPPIDLTPGVDGMVWVGAPH
Ga0210407_100296297	3300020579	Soil	VGHDTGAGKIAVLDLRAWKMQPPIDLTPGVDGLAWLPDSH
Ga0210407_107552052	3300020579	Soil	SGTGAGRIAVLDLQSWEMETPIDLSPGVDGLAWVPSVQVN
Ga0210399_107382612	3300020581	Soil	IAYISGTGAGKIAVLDLRSWEMQQPIELTPGVDGLAWIAGTPK
Ga0210399_111154382	3300020581	Soil	EIAYVSGTGAGKIAVLDLQSWKMQLPIDLTPGVDSLAWAGASN
Ga0210404_106017592	3300021088	Soil	TGAGKIAVLDLRSWKMQQPIELTPGVDGLAWALAPH
Ga0210405_113155641	3300021171	Soil	CVGAGKIAVLDLRTWQLEQPIVLTPGVDGLAWAPATSADKTR
Ga0210386_110129522	3300021406	Soil	ILIRPGGDIAYISGTGAGKIAVLDLRSWEMQQPIELTPGVDGLAWIAGTPK
Ga0212123_100896555	3300022557	Iron-Sulfur Acid Spring	ATAFISCVSAGKIAVLDLRAWQLQQPIVLTPGVDGLAWMPVNTGDKQR
Ga0212123_102166323	3300022557	Iron-Sulfur Acid Spring	ATAFISCVSAGKIAVLDLRAWQLQQPIVLTPGVDGLAWMPVNPGNKQR
Ga0242665_101086041	3300022724	Soil	EIAYVSGTGAGKIGVLDLRAWKMQPPIDLTPGVDGLAWLPASH
Ga0137417_10908351	3300024330	Vadose Zone Soil	GRGNRLYVSGTGAGKIAVLDLRSWKMQQSIDLTPGVDGLAWATALH
Ga0209154_10067276	3300026317	Soil	GNIAYVSGTGAGKIAVLDLLSWKLEPPIDLTPGVDGMVWVSASR
Ga0209131_10075901	3300026320	Grasslands Soil	AYVSGTGAGKIAVLDLHSWKMQQPIDLTPGVDGLAWATAPSHKSW
Ga0209803_10146935	3300026332	Soil	GTGAGKIAVLDLLSWKMEPPIDLTPGVDGMVWVGAPH
Ga0209161_103038032	3300026548	Soil	DAPERSSEILVRPDGNIAYVSGTGAGKIAVLDLLSWKLEPPIDLTPGVDGMVWVSASH
Ga0209648_103624403	3300026551	Grasslands Soil	ERSSEILIRPGGEIAYVSATGAGKIAVLDLRSWKLQPPIDLTQGVDGLAWVSAAH
Ga0179593_12181532	3300026555	Vadose Zone Soil	LIRPGGEIAYVSGTGAGKIAVLDLRSWKMQPPIDLTPGVDGLAWVGAAH
Ga0179587_102375631	3300026557	Vadose Zone Soil	EIPERSSEILIRPGGEIAYVSGTGAGKIAVLDLRSWKMQPPIDLTPGVDGLAWVSAAH
Ga0209588_10077776	3300027671	Vadose Zone Soil	IRPGGEIAYVSGTGAGKIAVLDLRSWKMQPPIDLTPGVDGLAWVGAAH
Ga0209448_101408791	3300027783	Bog Forest Soil	GTGAGKIGVLDLRTWKMQPPIDLTPGVDGLAWLPASH
Ga0209180_103537072	3300027846	Vadose Zone Soil	DIAYVSGTGAGKIAVLDLHSWKMQPSIDLTPGVDGLSWATVPQ
Ga0209180_106075742	3300027846	Vadose Zone Soil	PGGEMAYISGTGAGKIAILDLRSWETQQPIELTPGVDGLAWIPATRSN
Ga0209693_102227442	3300027855	Soil	VPKRSSEILIRPGGDIAYISGTGAGKIAVLDLRSWEMQQPIELTPGVDGLAWIAGTPK
Ga0209283_104134122	3300027875	Vadose Zone Soil	GGEIAYVSGTGAGKIAVLDLRSWKMQQPIDLTPGVDGLAWASALR
Ga0209590_102323383	3300027882	Vadose Zone Soil	IRPGGDIAYISGTGDGKIAVLDLRSWNMQSPIELTPGVDGLAWVPVHQK
Ga0307468_1006014921	3300031740	Hardwood Forest Soil	ISGTGAGKVAVLDLRAWEMQQPIELTPGVDGLAWIPATGSN
Ga0307477_101449883	3300031753	Hardwood Forest Soil	VSGTGAGKIAVLDLRSWKMQPTIDLTPGVDGLSWATVPQ
Ga0307473_109471121	3300031820	Hardwood Forest Soil	PGGDIAYISGTGAGKIAVLDLRAWQMQPPIELTPGVDGLAWMPVSEGK
Ga0307473_113588661	3300031820	Hardwood Forest Soil	ELPVKSSEILIAPSGETAYISGTGAGKIAVLDLRSWEMQPPIELTPGVDGLAWISVPQGK
Ga0307479_114067251	3300031962	Hardwood Forest Soil	GGEIAYVSGTGAGKIAVLNLGSWKMLPPIDLTPGVDGLAWAPVSQ
Ga0311301_117183021	3300032160	Peatlands Soil	RPGGEMAYVSGTGAGKIAVLDLRSWEMQPPIDLTPGVDGLAWLPASH
Ga0307471_1038409362	3300032180	Hardwood Forest Soil	TRSSEILIRPGGDMAYISGTGAGKIAVLELRTWEMQQPIELTPGVDGLAWIPATHER
Ga0307471_1043436752	3300032180	Hardwood Forest Soil	AYVSGTGAGKIAVLDLHSWKMQPSIDLTPGVDGLAWATGPQ
Ga0316231_10339388	3300032722	Freshwater	AYVSCIGSGKIAVLDLKAWEMKPTIDLAPGVDGMAFSSQSH
Ga0335077_114476171	3300033158	Soil	APKNSSEILIRPGGDVAYVSGTGAGKIGVYDLHAWQALPPIELSPGVDGLAWLPATRN

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103768

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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