Metagenome / Metatranscriptome Family F103788

Basic Information
Family ID	F103788
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	103 residues
Representative Sequence	VDLLRNLFGNLTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSLEGVSTEIKREVHRSFEGTSPGGRRKKLVHCVQRAEGNVHRIERCTRRF
Number of Associated Samples	92
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.91 %
% of genes near scaffold ends (potentially truncated)	14.85 %
% of genes from short scaffolds (< 2000 bps)	50.50 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Most Common Taxonomy
Group	Bacteria (75.248 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.812 % of family members)
Environment Ontology (ENVO)	Unclassified (46.535 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.535 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 71.97% β-sheet: 0.00% Coil/Unstructured: 28.03%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF01966	HD	13.86
PF13280	WYL	13.86
PF02537	CRCB	4.95
PF01804	Penicil_amidase	3.96
PF01850	PIN	1.98
PF08924	DUF1906	1.98
PF04321	RmlD_sub_bind	1.98
PF02641	DUF190	1.98
PF13490	zf-HC2	1.98
PF01451	LMWPc	0.99
PF00230	MIP	0.99
PF00211	Guanylate_cyc	0.99
PF03176	MMPL	0.99
PF01471	PG_binding_1	0.99
PF08645	PNK3P	0.99
PF13641	Glyco_tranf_2_3	0.99
PF00809	Pterin_bind	0.99
PF02452	PemK_toxin	0.99
PF01965	DJ-1_PfpI	0.99
PF13823	ADH_N_assoc	0.99
PF01872	RibD_C	0.99
PF09594	GT87	0.99
PF01370	Epimerase	0.99
PF12833	HTH_18	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0239	Fluoride ion exporter CrcB/FEX, affects chromosome condensation	Cell cycle control, cell division, chromosome partitioning [D]	4.95
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	3.96
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	3.96
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	3.96
COG2366	Acyl-homoserine lactone (AHL) acylase PvdQ	Secondary metabolites biosynthesis, transport and catabolism [Q]	3.96
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	1.98
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.98
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	1.98
COG1090	NAD dependent epimerase/dehydratase family enzyme	General function prediction only [R]	1.98
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	1.98
COG1993	PII-like signaling protein	Signal transduction mechanisms [T]	1.98
COG0241	Histidinol phosphatase/D-glycero-mannoheptose bisphosphatephosphatase, HAD superfamily	Amino acid transport and metabolism [E]	0.99
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.99
COG0580	Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)	Carbohydrate transport and metabolism [G]	0.99
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.99
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.99
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.99
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.99
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.25 %
Unclassified	root	N/A	24.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.25 %
Unclassified	root	N/A	24.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.25 %
Unclassified	root	N/A	24.75 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	72.28 %
Unclassified	root	N/A	24.75 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	72.28 %
Unclassified	root	N/A	24.75 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	37.62 %
Unclassified	root	N/A	24.75 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	29.70 %
Unclassified	root	N/A	24.75 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	3.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.75 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	9.90 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	3.96 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.75 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	9.90 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	3.96 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.75 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	9.90 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	3.96 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2.97 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000858\|JGI10213J12805_10082092	Not Available	1969	Open in IMG/M
3300001213\|JGIcombinedJ13530_100996640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	646	Open in IMG/M
3300002568\|C688J35102_119638044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	737	Open in IMG/M
3300002568\|C688J35102_120316069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	986	Open in IMG/M
3300004071\|Ga0055486_10083860	Not Available	699	Open in IMG/M
3300004153\|Ga0063455_100090266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1223	Open in IMG/M
3300005329\|Ga0070683_100004207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11799	Open in IMG/M
3300005333\|Ga0070677_10000019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50177	Open in IMG/M
3300005337\|Ga0070682_100000038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	145670	Open in IMG/M
3300005340\|Ga0070689_100118796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2110	Open in IMG/M
3300005366\|Ga0070659_100038679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	3722	Open in IMG/M
3300005437\|Ga0070710_10452247	Not Available	871	Open in IMG/M
3300005539\|Ga0068853_100014050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6552	Open in IMG/M
3300005548\|Ga0070665_100000128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	142568	Open in IMG/M
3300005578\|Ga0068854_100052738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2918	Open in IMG/M
3300005587\|Ga0066654_10000010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26012	Open in IMG/M
3300005614\|Ga0068856_100044760	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4356	Open in IMG/M
3300005718\|Ga0068866_10289626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1018	Open in IMG/M
3300005719\|Ga0068861_100890966	Not Available	842	Open in IMG/M
3300005841\|Ga0068863_100000039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	161450	Open in IMG/M
3300006173\|Ga0070716_100206374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1310	Open in IMG/M
3300006604\|Ga0074060_10007090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4108	Open in IMG/M
3300006853\|Ga0075420_100343197	Not Available	1293	Open in IMG/M
3300006854\|Ga0075425_102568608	Not Available	563	Open in IMG/M
3300006871\|Ga0075434_101277025	Not Available	745	Open in IMG/M
3300006954\|Ga0079219_10000814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	7052	Open in IMG/M
3300009098\|Ga0105245_10000077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	101470	Open in IMG/M
3300009098\|Ga0105245_10000308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	46809	Open in IMG/M
3300009553\|Ga0105249_10000159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	82172	Open in IMG/M
3300009553\|Ga0105249_10272420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1687	Open in IMG/M
3300010042\|Ga0126314_10785059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	701	Open in IMG/M
3300010043\|Ga0126380_12199365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	510	Open in IMG/M
3300010362\|Ga0126377_10629218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1120	Open in IMG/M
3300010362\|Ga0126377_11054420	Not Available	881	Open in IMG/M
3300010375\|Ga0105239_10350514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1667	Open in IMG/M
3300011119\|Ga0105246_10414381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1122	Open in IMG/M
3300012903\|Ga0157289_10010450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1787	Open in IMG/M
3300012909\|Ga0157290_10116248	Not Available	812	Open in IMG/M
3300012912\|Ga0157306_10000020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	29303	Open in IMG/M
3300012915\|Ga0157302_10269266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	647	Open in IMG/M
3300012943\|Ga0164241_10000425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80859	Open in IMG/M
3300012943\|Ga0164241_10000629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	58072	Open in IMG/M
3300012955\|Ga0164298_10037164	Not Available	2242	Open in IMG/M
3300012960\|Ga0164301_10123099	Not Available	1536	Open in IMG/M
3300012984\|Ga0164309_10617073	Not Available	849	Open in IMG/M
3300012987\|Ga0164307_10490505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	926	Open in IMG/M
3300013306\|Ga0163162_10963884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	963	Open in IMG/M
3300013308\|Ga0157375_10216791	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2072	Open in IMG/M
3300014263\|Ga0075324_1010117	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1535	Open in IMG/M
3300014270\|Ga0075325_1003768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2411	Open in IMG/M
3300014323\|Ga0075356_1000453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7130	Open in IMG/M
3300014326\|Ga0157380_10000127	All Organisms → cellular organisms → Bacteria	41967	Open in IMG/M
3300014502\|Ga0182021_11705817	Not Available	758	Open in IMG/M
3300014968\|Ga0157379_10048211	Not Available	3802	Open in IMG/M
3300015067\|Ga0167640_100032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10437	Open in IMG/M
3300015068\|Ga0167645_100006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	40621	Open in IMG/M
3300015371\|Ga0132258_10081336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7556	Open in IMG/M
3300015371\|Ga0132258_13961840	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1005	Open in IMG/M
3300017792\|Ga0163161_10000192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	56160	Open in IMG/M
3300018429\|Ga0190272_10086618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1961	Open in IMG/M
3300018431\|Ga0066655_10834701	Not Available	627	Open in IMG/M
3300018433\|Ga0066667_10082370	Not Available	2078	Open in IMG/M
3300018476\|Ga0190274_12257952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	641	Open in IMG/M
3300019884\|Ga0193741_1044060	Not Available	1152	Open in IMG/M
3300020021\|Ga0193726_1138657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1069	Open in IMG/M
3300021339\|Ga0193706_1010281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	3239	Open in IMG/M
3300021403\|Ga0210397_11432822	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	536	Open in IMG/M
3300022870\|Ga0247782_1025484	Not Available	776	Open in IMG/M
3300022894\|Ga0247778_1040076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1162	Open in IMG/M
3300025898\|Ga0207692_10081751	Not Available	1729	Open in IMG/M
3300025927\|Ga0207687_10000012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	370729	Open in IMG/M
3300025927\|Ga0207687_10002237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13179	Open in IMG/M
3300025932\|Ga0207690_10053684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2706	Open in IMG/M
3300025934\|Ga0207686_10083227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	2094	Open in IMG/M
3300025936\|Ga0207670_10051624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	2762	Open in IMG/M
3300025939\|Ga0207665_10980250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	672	Open in IMG/M
3300025944\|Ga0207661_10000679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	22061	Open in IMG/M
3300025961\|Ga0207712_10000003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615314	Open in IMG/M
3300025961\|Ga0207712_10049644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2925	Open in IMG/M
3300025981\|Ga0207640_10123336	Not Available	1861	Open in IMG/M
3300026035\|Ga0207703_10000185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	72988	Open in IMG/M
3300026041\|Ga0207639_10005327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8686	Open in IMG/M
3300026046\|Ga0208780_1005580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1084	Open in IMG/M
3300026051\|Ga0208911_1001736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1907	Open in IMG/M
3300026070\|Ga0208423_1000593	Not Available	3743	Open in IMG/M
3300026078\|Ga0207702_10009682	All Organisms → cellular organisms → Bacteria	8091	Open in IMG/M
3300026088\|Ga0207641_10000072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	151067	Open in IMG/M
3300026308\|Ga0209265_1000067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	23146	Open in IMG/M
3300027383\|Ga0209213_1020008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1249	Open in IMG/M
3300027496\|Ga0208987_1002456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2906	Open in IMG/M
3300027524\|Ga0208998_1000560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4417	Open in IMG/M
3300027718\|Ga0209795_10240257	Not Available	507	Open in IMG/M
3300027775\|Ga0209177_10006863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2399	Open in IMG/M
3300028790\|Ga0307283_10027570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1245	Open in IMG/M
3300028802\|Ga0307503_10000055	All Organisms → cellular organisms → Bacteria	77229	Open in IMG/M
3300031200\|Ga0307496_10000013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10626	Open in IMG/M
3300031226\|Ga0307497_10546919	Not Available	578	Open in IMG/M
3300031740\|Ga0307468_100714378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	840	Open in IMG/M
3300031740\|Ga0307468_102123130	Not Available	541	Open in IMG/M
3300031908\|Ga0310900_11449534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	578	Open in IMG/M
3300034268\|Ga0372943_0592221	Not Available	728	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	63.37%
Host-Associated	Host-Associated	36.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.39%
Plants	Host-Associated → Plants	36.63%
Aquatic	Environmental → Aquatic	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	59.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	14.85%
Marine	Environmental → Aquatic → Marine	1.98%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.98%
Phylloplane	Host-Associated → Plants → Phylloplane	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.83%
Loam	Environmental → Terrestrial → Soil → Loam	14.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.96%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.83%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.87%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.91%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.95%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.96%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.96%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.97%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.98%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.98%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.99%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.99%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.99%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.99%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.81%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	5.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.96%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.97%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.97%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.97%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.98%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.98%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.98%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.98%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.99%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.99%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.99%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.99%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004071	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014323	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015067	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7A, Adjacent to main proglacial river, mid transect (Watson river))	Environmental	Open in IMG/M
3300015068	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8C, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300021339	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c1	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300022870	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L019-104C-5	Environmental	Open in IMG/M
3300022894	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L049-202B-5	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026046	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1 (SPAdes)	Environmental	Open in IMG/M
3300026051	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026070	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300027383	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027496	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027524	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027718	Agave microbial communities from Guanajuato, Mexico - Or.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10213J12805_100820922	3300000858	Soil	MDLLRNLFGSLTSGIIRLAVTAGVLFLAYLFILKPVLDTTNEAIRSSGLDQIGKSLEGVSKEIKRQVHRSFEATTPGARRRKLRRCIDSANGDVQRIERCARRF*
JGIcombinedJ13530_1009966402	3300001213	Wetland	MDLLRNLFGNLTSGAIRLAVAAGVLFLCYLFIVKPILKTTDEAFKSTGLDQIGKSLEGMSTQIKREVHHSFEVTKRQGANPQKLVHCVQRANGDVKRIERCTRRF*
C688J35102_1196380442	3300002568	Soil	MDLLRNLFGNLTSGIIRLAVAAGVLFLCYLFIVKPVLQTTNDAIHSSGLDQIGSSIEGVSKEIKREVHRSFETTKRHGGNPHKLIHCVKSANGDVKHIERCTRRF*
C688J35102_1203160692	3300002568	Soil	MDLLRNLFGNLTSGIIRLAVAAGVLFLCYLFIVKPVLKTTNDAIHSTGLDRIGKSIEGVSKEVRREVHRSFETTKRHGGNPHKLIHCVKTANGNVKRIERCTRRF*
Ga0055486_100838602	3300004071	Natural And Restored Wetlands	MDLLRNLFGNVTSGIIRLAVTAGILFLVYLFIVKPVLDTTTEAIHSTGLDRIGKSMEDVSKQVKREVHRSFEVTGPGAQRQKLLHCVQHSNGNVHRIERCT
Ga0063455_1000902662	3300004153	Soil	VDLLRNLFGSLTSGIIRLAVFAGMLLLVYLLIVKPVLKTTTDAIHSSGIDQIGRSLDGVSTEIKREVHRTFEGASPGGQRKKLVHCIQRASGNAHKIERCTRRF*
Ga0070683_1000042072	3300005329	Corn Rhizosphere	VDLLRNLFGNLTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSMEGVSKEIKREVHRTFEGAGPGGQRKKLVHCVQRANGNAHKIERCTRRF*
Ga0070677_1000001936	3300005333	Miscanthus Rhizosphere	VDLLRNLFGNVTSGIIRLAVTAGILFLVYLFIVKPVLDTTTDVIHQTGLDKVGDSLEGVSKEIKREVRHSFESSNPGAQRKRLVRCVQRANGNVHRIEACTQRF*
Ga0070682_10000003831	3300005337	Corn Rhizosphere	MDLLRNLFGNVTSGIIRLAVTAGVLFLVYLFILKPVLDTTTEVVHSTGLDQIGKSLDGVSKEIKREVHRSFEVTKQRGANPQKLVNCVQRANGDVKRIERCTRKF*
Ga0070689_1001187962	3300005340	Switchgrass Rhizosphere	MDLLRNLFGNVASGIIRLAVTAGVLFLCYLFIVKPVLKTTNDAIESSGLDQIGKSLEGMSMQVKREVHHSFEVTKRKGANPRKLVTCVKRADGDVQRIQRCTRRF*
Ga0070659_1000386792	3300005366	Corn Rhizosphere	MDLLRNLFGNVTSGIIRLAVTAGVLFLCYLFIVKPVLETTNDAIKSSGLDRIGKSLEGVSTTIKREVHRSFDATRPGNRRQRLVHCVKRADGDVHRIQRCTRRF*
Ga0070710_104522471	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VDLLRNLFGNLTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSMEGVSKEIKREVHRTFEGASPGGQRKKLVRCVQRAEGNAHRIERCTRRF*
Ga0068853_10001405010	3300005539	Corn Rhizosphere	VDLLRNLFGSLTSGIIRLAVFAGMLLLLYLLIVKPVLKTTTDAIHSSGIDQIGKSMEGVSTEIKREVHRTFEGASPGGQRKKLVHCIQRASGNAHRIERCTRRL*
Ga0070665_10000012851	3300005548	Switchgrass Rhizosphere	VDLLRNLFGNVTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDRIGKSLDGVSTEIKREVHRTFEGASPGGQRKKLVHCIQRAEGNAHRIERCTRRF*
Ga0068854_1000527383	3300005578	Corn Rhizosphere	VDLLRNLFGNVTSGIIRLAVTAGILFLVYLFIVKPVLDTTTDVIHQTGLDKVGNSLEGVSKEIKREVRHSFESSNPGAQRKRLVRCVQRANGNVHRIEACTQRF*
Ga0066654_1000001011	3300005587	Soil	VDLLRNLFGNVTSGIIRLAVFAGMLLLLYLLIVKPVLKTTTDAIHSTGLDQIGKSMEGVSTEIKREVHRTFEGASPGGQRNKLVHCVQHAEGNVHRIERCTRRF*
Ga0068856_1000447606	3300005614	Corn Rhizosphere	VDLLRNLFGSLTSGIIRLAVFAGMLLLVYFLIVKPVLKTTTDAIHSSGIDQIGKSLDGVSTEIKREVHRTFEGASPGSQRKKLVRCVRRASGNAHRIERCTRRF*
Ga0068866_102896262	3300005718	Miscanthus Rhizosphere	RNLFGNLTSGVIRLAVTAGVLFLCYLFIVKPVLKTTNDAIHSTGLDQIGKSIEGVSREVKREVHRSFETTKRHGGNPRKLIHCVKHENGDVKHIERCTRRF*
Ga0068861_1008909662	3300005719	Switchgrass Rhizosphere	MDLLRNLFGNVTSGIIRLAVTAGILFLVYLFILKPVLDTTTEVVHSTGLDQIGKSLEGMGTEIKREVHRSFEVTSPGRQREKLVHCVQRAEGNVHRIKVCTQRF*
Ga0068863_1000000399	3300005841	Switchgrass Rhizosphere	MDLLRNLFGNVTSGIIRLAVTAGVLFLAYLFIVKPVLDTTSDAIHQTGFDSIGKSIEGVSKEIRRQVHHSFETTKKHGGNPQKLVHCVQRANGDVKRIERCTRRF*
Ga0070716_1002063742	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MDLLRNLFGSLTSGIIRLAVAAGVLFLCYLFIVKPVLKTTNDAIHSTGLDQIGNSIEGVSKEVRREVHRSFETTKRHGGNPHKLIHCIKRSNGDVKHIERCTRRF*
Ga0074060_100070904	3300006604	Soil	VDLLRNLFGNVTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSMEGVSTEIKREVHRTFEGASPGGQRKKLVHCVQRAEGNVHKIERCTRRF*
Ga0075420_1003431972	3300006853	Populus Rhizosphere	MDLLRNLFGNLTSGIIRLAVAAGVLFCCYLFILKPVLDTTNNVIKSTGLDQIGESLEGMSKQIKREVHHSFEVTKRKGANPQKLVNCVKRANGDVKQIQRCTRRF*
Ga0075425_1025686081	3300006854	Populus Rhizosphere	MDLLRNLFGNLTSGIIRLAVTAGVLFLCYLFIVKPVLKTTNDAIHQTGFDSIGKSIEGVSKEIRREVHRSFETTKKHGGNPQKLVHCVQRANGDVQRIQRCTRRF*
Ga0075434_1012770252	3300006871	Populus Rhizosphere	VDLLRNLFGNVTSGIIRLAVTAGILFLVYLFIVKPVLDTTTDVIHSTGLDKVGDSLEGVSKEIKREVRHSFESSNPGAQRKRLVRCVQRADGNVHRIEACTQRF*
Ga0079219_100008144	3300006954	Agricultural Soil	MDLLRNLFGNLTSGVIRLAVTAGVLVLVYLLFLKPILKTTNDAIDKAGFDQIGKSIEGVSKEVQRQVHHSFHATGSAARRQRLVHCVKRANGDVQRIQRCTRQF*
Ga0105245_1000007785	3300009098	Miscanthus Rhizosphere	VDLLRNLFGNVTSGIIRLAVAAGILFLVYLFIVKPVLDTTTDAIHSTGLDKVGDSLEGVSREIKREVRHSFQSSNPGAQRKRLLHCVQRANGNVHRIEACTRRF*
Ga0105245_1000030839	3300009098	Miscanthus Rhizosphere	VDLLRNLFGSLTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSSGLDQIGKSMEGVSTEIKREVHRTFEGASPGGQRRKLVHCVQRAEGNVHRIERCTRRF*
Ga0105249_1000015939	3300009553	Switchgrass Rhizosphere	VDLLRNLFGNVTSGIIRLAVTAGVLFLVYLFIVKPVLDTTTDVIHSTGLDKVGDSLEGVSREIKREVRHSFQSSSPGAQRKRLVHCVQRADGNVHRIEACTQRF*
Ga0105249_102724202	3300009553	Switchgrass Rhizosphere	VDLLRNLFGNLTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSLEGVSTEIKREVHRSFEGTSPGGRRKKLVHCVQRAEGNVHRIERCTRRF*
Ga0126314_107850592	3300010042	Serpentine Soil	MDLLRNLFGSLTSGIIRLAVTAGVLFLCYLFIVKPVLKTTTDAIHETGFDRIGKSIEGVNKEIRREVHRSFQTTKRHGGNPQKLVHCIQRANGDVQRIQRCTRRF*
Ga0126380_121993652	3300010043	Tropical Forest Soil	VDLLRNLFGNVTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDKVGDSLEGVSKEIRHEVRHSFESTGPGAQRKRLVHCV
Ga0126377_106292182	3300010362	Tropical Forest Soil	VDLLRNLFGSLTSGVIRLAVMAGVLALVYLFIVKPVLKTTNDAIEKSGLNQIGKSIEGVSTEIQRQVHRSFKTAGPGAKRQKLVHCIQRANGDVHRIQRCARRF*
Ga0126377_110544201	3300010362	Tropical Forest Soil	MDLLRNLFGNVTSGIIRLAVTAGILFLAYLFIIKPVLKTTNDAIDKAGFDQIGKSIEGVSKEVQRQVHRSFKATGPTARRQKLVHCIQRANGDVNRIERCTRKF*
Ga0105239_103505142	3300010375	Corn Rhizosphere	MDLLRNLFGNLTSGIIRLAVTAGVLFLCYLFIVKPVLKTTNDAIHQTGFDSIGKSIEGVSKEIRREVHRSFETTKKHGGNPQKLVHCVQRANGDVKRIERCTRRF*
Ga0105246_104143811	3300011119	Miscanthus Rhizosphere	MDLLRNLFGNLTSGIIRLAVTAGVLFLCYLFIVKPVLKTTDEAIRSTGLDQIAKSLEGMSTKVNREVHHSFEVTKRKGANPRKLVTCVKRANGDVHRIQRCTRRF
Ga0157289_100104502	3300012903	Soil	MDLLRNLFGNVTSGIVRLAVTAGILFLVYLFILKPVLDTTTEVVHSTGLDRIGKSLEGMGTEIKREVHRSFEVTGPGAQRKKLVHCVQRANGDVKRIERCTRRF*
Ga0157290_101162481	3300012909	Soil	MDLLRNVFGNLTSGVIRLAVTAGILGLVYLFIVKPVLNTTEDAIHRTGFDSIGKSIEGVSKEIKRQVHRSFQATGPTARRQKLVHCIQRAEGDVQKIQRCTRRF*
Ga0157306_1000002019	3300012912	Soil	MDLLRNLFGNLTSGIIRLAVTAGVLFLVYLFLVKPVLDTTNEAIKSTGLDRIGKSLDDVGKQIKRQVHRSFEAAKPGAKRQRLVNCIQRAEGDVQRIQRCTRRF*
Ga0157302_102692662	3300012915	Soil	MDLLRNLFGNLTSGIIRLAVAAGVLFLCYLFIVKPVLKTTDDAIKSSGFDQIGKSIEGVSTEIRRQVHRSFETTKRHGGNPQKLVHCVQHANGDVKRIERCTRRF*
Ga0164241_1000042521	3300012943	Soil	MDILRNLFGNLTSGVIRLAVMAGVLFLCYLFIIKPVLDTTTEVIHSTGLDQIGKSLDDVSKQIKREVHHSFEATKPGAKRQRLVKCVQRANGDVQRIQRCTRRF*
Ga0164241_100006295	3300012943	Soil	MDLLRNLFGNLTSGIIRLAVAAGVLFACYLFILKPVLDTTTEVIHSTGLDRLGKSLEGMSKEVKREVHHSFEVTKQRGANPQKLVNCVQRANGDVQRIQRCTRRF*
Ga0164298_100371642	3300012955	Soil	MDLLRNLFGNVTSGIIRLAVTAGILFLVYLFILKPVLDTTTDVVHSTGLDQIGKSLEGMSTEIKREVHRSFEVTNPGGQRKKLVHCIQRAEGNVHRIERCTRRF*
Ga0164301_101230992	3300012960	Soil	MDLLRNLFGNLTSGIIRLAVAAGVLFLCYLFILKPVLDTTTEVIHSTGLDQLGKSLEGMSKEVKREVHHSFEVTKQRGANPQKLVRCVERANGDVQRIQRCTRRF*
Ga0164309_106170732	3300012984	Soil	GIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSLDGVGVEIKREVHRTFEGASPGGQRKKLVHCVQRANGNVHRIERCTRKF*
Ga0164307_104905051	3300012987	Soil	VDLLRNLFGNLTSGIILLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSLEGVSTEIKREVHRSFEVTSPGGQRKKLVHCVQRAEGNVHRIERCTRRF*
Ga0163162_109638842	3300013306	Switchgrass Rhizosphere	VDLLRNLFGNLTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSMEGVSTEIKREVHRSFEVTSPGGQRKKLVHCVQRANGNVHRIERCTKKF*
Ga0157375_102167911	3300013308	Miscanthus Rhizosphere	LLRNLFGSLTSGIIRLAVFAGMLLLIYLLIVKPVLKTTTDAIHSTGLDRIGKSLDGVSTEIKREVHRTFEGVSPGGQRKKLVHCIQRAEGNAHRIERCTRRF*
Ga0075324_10101172	3300014263	Natural And Restored Wetlands	VDLLRNLFGSVTSGIVRLAVTAGVLFLVYLFLVKPVLKTTNDAIEKSGFNQIGKSIEDVSKQVQRQVRRSFHATKPGARRRKLVRCVEHANGNVHRIQRCARKF*
Ga0075325_10037683	3300014270	Natural And Restored Wetlands	MDLLRNLFGNLTSGIIRLAVAAGVLFCCYLFILKPVLDTTNKAIESSGFDRIGKSLEGMSKSIKREVHHSFEVSKRKGANPQKLVNCVKRANGDVKQIQRCTRRF*
Ga0075356_10004539	3300014323	Natural And Restored Wetlands	MDLLRNLFGNLTSGIIRLAVAAGVLFLCYLFIVKPVLKTTDDAFHSSGLDQIGNSIEGVSKEIKREVHRSFEATKRHGNPNKLIHCIKHANGDVKHIERCTRRF*
Ga0157380_1000012735	3300014326	Switchgrass Rhizosphere	MDLLRNLFGNLTSGIIRLAVTAGVLFLCYLFIVKPVLKTTDEAFKSTGLDQIGKSLEGMSRQIKREVHRSFEVTKPGNRRQRLIHCVEEAEGNVHRLQRCTRRF*
Ga0182021_117058172	3300014502	Fen	VDLLRNLFGNLTSGIIRLAVFAGMLLLLYLLIVKPVLNKADEAFHSTGLDQIGKSMEGVSTEIKREVHRTFEGASPGGQRKKLVHCVQRAEGNAHRIERCTRRF*
Ga0157379_100482112	3300014968	Switchgrass Rhizosphere	VDLLRNLFGNVTSGIVRLAVTAGILFLVYLIIIKPVLDTTTDVIHSTGLDKVGDSLEGVSKEIKREVRHSFQSSSPGAQRKRLVHCVQRADGNVHRIEACTQRF*
Ga0167640_1000325	3300015067	Glacier Forefield Soil	VDLLRNLFGNVTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSLDGVSTEIKREVHRTFEGVSPGGQRKKLVHCIQRAEGNAHRIERCTRRF*
Ga0167645_10000633	3300015068	Glacier Forefield Soil	VDLLRNLFGNVTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSMEGVSTEIKREVHRTFEGVSPGGQRKKLVHCVQRADGNVHRIERCTRKF*
Ga0132258_100813368	3300015371	Arabidopsis Rhizosphere	MDLLRNLFGNLTSGIIRLAVTAGVLFLASLFIVKPVLDTTTDAIHSTGLDQVGKSLEGMSTEIKREVHRSFKTTKRHGGNPQKLVHCVQRANGDVQRIQRCTRRF*
Ga0132258_139618402	3300015371	Arabidopsis Rhizosphere	VDLLRNLFGNLTSGIIRLAVTAGVLFLCYLFIVKPVLKTTNDAIHQTGFDQIGKSIEGVSKQIKREVHRSFQVTKQRGANPQKLVHCIQRASGDVKRIERCTRRF*
Ga0163161_1000019232	3300017792	Switchgrass Rhizosphere	MFLLRTLFGGLTSGIIRLAVAAGVLFLCYLFIVKPVLKTTDDAIHSTGLDQIGNSIEGVSKEIKREVHRSFETTKRHGGNPNKLIHCVKHANGDVKRIERCTRRF
Ga0190272_100866182	3300018429	Soil	MDLLRNLFGNVTSGIIRLAVTAGILFLAYLFIVKPVLDTTNEAIHSTGLDKIGESLEGMSKQIKREVHRSFEVTGSAARKQKLVHCVKAANGNVQRIERCTRRF
Ga0066655_108347012	3300018431	Grasslands Soil	VDLLRNLFGNVTSGIIRLAVFAGMLLLLYLLIVKPVLKTTTDAIHSTGLDQIGKSMEGVSTEIKREVHRTFEGASPGAQRNKLVHGVQHAKR
Ga0066667_100823702	3300018433	Grasslands Soil	VDLLRNLFGSLTSGIIRLAVFAGMLLLLYFLIVKPVLKTTTDAIHSTGIDQIGKSLDGVSTEIKREVHRTFKGASPGGQRKKPVRCVQR
Ga0190274_122579522	3300018476	Soil	MDLLRNLFGNVTSGIIRLAVTAGILFLVYLFIIKPVLDTTTEAIHSTGLDQIGKSLEGMSTEIKREVHRSFEVTGSAARKQKLVRCVKAASGNVQRIERCTRRF
Ga0193741_10440601	3300019884	Soil	LLRNLFGNVTSGIIRLAVTAGVLFLCYLFIVKPVLDTTNEAIRSTGLDRIGKSLDDVGRQIKRQVHRSFEATKPGAKRQRLVECVKHADGDVKRIQRCTRRF
Ga0193726_11386571	3300020021	Soil	GIIRLAVAAGVLFLCYLFIVKPVLKTTDDAFKSSGIDQIGKSIEGVSTEIKREVHRSFEVTKHSGGGTHKLIHCIKQANGDVQRIQRCTRRF
Ga0193706_10102813	3300021339	Soil	MDLLRNLFGNVTSGIIRLAVTAGILFLVYLFILKPVLDTTTDAIHSTGLDRIGKSLEGMSTEIKHEVHHSFEATKQRGANPQKLIHCIRRANGDVKRIERCTWRF
Ga0210397_114328222	3300021403	Soil	VDLLRNLFGNVTSGIIRLAVFAGMLLLLYLLIVKPVLKTTTDAIHSTGLDQVGKSLEGVSSEIKREVHRTFEGASPGGQRKKLVRCVQRAE
Ga0247782_10254842	3300022870	Plant Litter	VDLLRNLFGNVTSGIIRLAVTAGILFLVYLFIVKPVLDTTTDVIHQTGLDKVGDSLEGVSKEIKREVRHSFESSNPGAQRKRLVRCVQRANGNVHRIEACTQRF
Ga0247778_10400761	3300022894	Plant Litter	MDLLRNLFGNLTSGIIRLAVTAGVLFLCYLFIVKPVLKTTNDAIESARLDRIGKSLEGVSTTIKREVHRSFDATRPGNRRQRLVHCVKRADGDVHRIQRCTRRF
Ga0207692_100817511	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VDLLRNLFGNLTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSMEGVSKEIKREVHRTFEGASPGGQRKKLVRCVQRAEGNAHRIERCTRRF
Ga0207687_10000012219	3300025927	Miscanthus Rhizosphere	VDLLRNLFGNVTSGIIRLAVAAGILFLVYLFIVKPVLDTTTDAIHSTGLDKVGDSLEGVSREIKREVRHSFQSSNPGAQRKRLLHCVQRANGNVHRIEACTRRF
Ga0207687_100022375	3300025927	Miscanthus Rhizosphere	VDLLRNLFGSLTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSSGLDQIGKSMEGVSTEIKREVHRTFEGASPGGQRRKLVHCVQRAEGNVHRIERCTRRF
Ga0207690_100536843	3300025932	Corn Rhizosphere	MDLLRNLFGNVTSGIIRLAVTAGVLFLCYLFIVKPVLETTNDAIKSSGLDRIGKSLEGVSTTIKREVHRSFDATRPGNRRQRLVHCVKRADGDVHRIQRCTRRF
Ga0207686_100832272	3300025934	Miscanthus Rhizosphere	VDLLRNLFGNLTSGIIRLAVFAGMLLLLYLLIVKPVLKTTTDAIHSTGLDQIGKSMEGVSKEIKREVHRTFEGASPGGQRKKLVRCVQRAEGNVHRIERCTRRF
Ga0207670_100516242	3300025936	Switchgrass Rhizosphere	MDLLRNLFGNVASGIIRLAVTAGVLFLCYLFIVKPVLKTTNDAIESSGLDQIGKSLEGMSMQVKREVHHSFEVTKRKGANPRKLVTCVKRADGDVQRIQRCTRRF
Ga0207665_109802502	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	AAGLLFLCYLFIVKPVLKTTNDAIHSTGLDQIGNSIEGVSKEVRREVHRSFETTKRHGGNPHKLIHCIKRSNGDVKHIERCTRRF
Ga0207661_100006792	3300025944	Corn Rhizosphere	VDLLRNLFGNLTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSMEGVSKEIKREVHRTFEGAGPGGQRKKLVHCVQRANGNAHKIERCTRRF
Ga0207712_10000003243	3300025961	Switchgrass Rhizosphere	VDLLRNLFGNVTSGIIRLAVTAGVLFLVYLFIVKPVLDTTTDVIHSTGLDKVGDSLEGVSREIKREVRHSFQSSSPGAQRKRLVHCVQRADGNVHRIEACTQRF
Ga0207712_100496442	3300025961	Switchgrass Rhizosphere	VDLLRNLFGNLTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSLEGVSTEIKREVHRSFEGTSPGGRRKKLVHCVQRAEGNVHRIERCTRRF
Ga0207640_101233362	3300025981	Corn Rhizosphere	VDLLRNLFGNVTSGIIRLAVTAGILFLVYLFIVKPVLDTTTDVIHQTGLDKVGNSLEGVSKEIKREVRHSFESSNPGAQRKRLVRCVQRANGNVHRIEACTQRF
Ga0207703_1000018511	3300026035	Switchgrass Rhizosphere	VDLLRNLFGNVTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDRIGKSLDGVSTEIKREVHRTFEGASPGGQRKKLVHCIQRAEGNAHRIERCTRRF
Ga0207639_100053273	3300026041	Corn Rhizosphere	VDLLRNLFGSLTSGIIRLAVFAGMLLLLYLLIVKPVLKTTTDAIHSSGIDQIGKSMEGVSTEIKREVHRTFEGASPGGQRKKLVHCIQRASGNAHRIERCTRRL
Ga0208780_10055802	3300026046	Natural And Restored Wetlands	VDLLRNLFGSVTSGIVRLAVTAGVLFLVYLFLVKPVLKTTNDAIEKSGFNQIGKSIEDVSKQVQRQVRRSFHATKPGARRRKLVRCVEHANGNVHRIQRCARKF
Ga0208911_10017362	3300026051	Natural And Restored Wetlands	MDLLRNLFGNLTSGIIRLAVAAGVLFCCYLFILKPVLDTTNKAIESSGFDRIGKSLEGMSKSIKREVHHSFEVSKRKGANPQKLVNCVKRANGDVKQIQRCTRRF
Ga0208423_10005932	3300026070	Natural And Restored Wetlands	MDLLRNLFGNLTSGIIRLAVAAGVLFLCYLFIVKPVLKTTDDAFHSSGLDQIGNSIEGVSKEIKREVHRSFEATKRHGNPNKLIHCIKHANGDVKHIERCTRRF
Ga0207702_100096826	3300026078	Corn Rhizosphere	VDLLRNLFGSLTSGIIRLAVFAGMLLLVYFLIVKPVLKTTTDAIHSSGIDQIGKSLDGVSTEIKREVHRTFEGASPGSQRKKLVRCVRRASGNAHRIERCTRRF
Ga0207641_1000007277	3300026088	Switchgrass Rhizosphere	MDLLRNLFGNVTSGIIRLAVTAGVLFLAYLFIVKPVLDTTSDAIHQTGFDSIGKSIEGVSKEIRRQVHHSFETTKKHGGNPQKLVHCVQRANGDVKRIERCTRRF
Ga0209265_100006724	3300026308	Soil	VDLLRNLFGNVTSGIIRLAVFAGMLLLLYLLIVKPVLKTTTDAIHSTGLDQIGKSMEGVSTEIKREVHRTFEGASPGGQRNKLVHCVQHAEGNVHRIERCTRRF
Ga0209213_10200082	3300027383	Forest Soil	MDLLRNLFGNLTSGIIRLAVTAGVLFLAYLFIVKPVLDKTDEAFHSTGFDQIGKSIEGVSKQIKREVHRSFEVTGSAARKQKLVHCVQHAGGDVQRIQRCTRRF
Ga0208987_10024562	3300027496	Forest Soil	VDLLRNLFGNVTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSLDGVSTEIKREVHRTFEGASPGGQRKKLVHCVQRANGNAHRIERCTRRF
Ga0208998_10005602	3300027524	Forest Soil	VDLLRNLFGNVTSGIVRLAVFAGMLLLLYFLIVKPVLKTTTDAIHSTGLDQIGKSLDGVSTEIKREVHRTFEGASPGGQRKKLVHCIQRAEGNAHRIERCTRRF
Ga0209795_102402571	3300027718	Agave	GIIRLAVFAGMLLLLYLLIVKPVLKTTTDAIHSTGLDQIGKSMEGVSTEIKREVHRTFEGASPGGQRKKLVHCVQRAEGNAHRIERCTRRF
Ga0209177_100068632	3300027775	Agricultural Soil	MDLLRNLFGNLTSGVIRLAVTAGVLVLVYLLFLKPILKTTNDAIDKAGFDQIGKSIEGVSKEVQRQVHHSFHATGSAARRQRLVHCVKRANGDVQRIQRCTRQF
Ga0307283_100275702	3300028790	Soil	VDLLRNLFGNLTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIHSTGLDQIGKSLEGMSTEIKREVHRSFEGASPGGQRKKLVHCIQRANGNAHRIERCTRRF
Ga0307503_100000553	3300028802	Soil	MDLLRNLFGNLTSGIIRLAVAAGVLFLCYLFIVKPVLKTTDDAIHSTGLDQIGKSIEGVSNEVKREVHSSFETTKRHGGNPHKLIHCIKIANGDVKHIERCTRRF
Ga0307496_100000132	3300031200	Soil	MDLLRNLFGNVTSGIIRLAVTAGILFLVYLFILKPVLDTTTDVIHSTGLDKIGKSLEGMSTEIKREVHHSFEVTKRRGANPQKLVYCVQRANGDVKRIERCTRKF
Ga0307497_105469191	3300031226	Soil	VDLLRNLFGNVTSGIIRLVVAAGVLGLCYLFIVKPVLKTTNDAIHQSGFDQIGNSIEGVSKEIKREVHRSFETTKKRGANPQWLVHC
Ga0307468_1007143782	3300031740	Hardwood Forest Soil	MDLLRNLFGNVTSGIIRLAVTAGILFLVYLFILKPVLDTTTEVVHSTGLDQIGKSLEGMSTEIKREVHHSFEVTGSAARQQKLVHCVQRADGNVHRIERCTRRF
Ga0307468_1021231302	3300031740	Hardwood Forest Soil	MDLLRNLFGNVTSGIIRLAVAAGVLFLCYLFIVKPVLKTTNDAIHSTGLDQIGKSIEGVSKEIKREVHRSFETTKRHGGNPNKLIHCVKRANG
Ga0310900_114495341	3300031908	Soil	MDLLRNLFGNVTSGIIRLAVTAGVLFLCYLFIVKPVLETTNDAIKSTGLDQIGKSLEGVSTTIKREVHHSFEATKPGNRRQKLVHCVQHANGNVHRIQRCTRRF
Ga0372943_0592221_237_551	3300034268	Soil	VDLLRNLFGNLTSGIIRLAVFAGMLLLLYLLIIKPVLKTTTDAIYSTGLDQIGKSMEGVSTEIKREVHRTFEGASPGGQRKKLVHCVQRANGNVHRIERCTRRF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103788

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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