Metagenome Family F103865

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F103865
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	90 residues
Representative Sequence	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGPPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLG
Number of Associated Samples	90
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.01 %
% of genes near scaffold ends (potentially truncated)	99.01 %
% of genes from short scaffolds (< 2000 bps)	97.03 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (70.297 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (12.871 % of family members)
Environment Ontology (ENVO)	Unclassified (45.545 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.356 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 41.90% β-sheet: 0.00% Coil/Unstructured: 58.10%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF08281	Sigma70_r4_2	93.07
PF03544	TonB_C	1.98
PF00491	Arginase	1.98
PF12704	MacB_PCD	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	1.98
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	1.98

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.30 %
Unclassified	root	N/A	29.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.30 %
Unclassified	root	N/A	29.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.30 %
Unclassified	root	N/A	29.70 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	60.40 %
Unclassified	root	N/A	29.70 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	60.40 %
Unclassified	root	N/A	29.70 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	48.51 %
Unclassified	root	N/A	29.70 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	9.90 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	48.51 %
Unclassified	root	N/A	29.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	9.90 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	48.51 %
Unclassified	root	N/A	29.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	9.90 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	44.55 %
Unclassified	root	N/A	29.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	9.90 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	3.96 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	44.55 %
Unclassified	root	N/A	29.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	9.90 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.96 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2067725004\|GPKC_F5V46DG02ETTOQ	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	504	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c2114324	Not Available	542	Open in IMG/M
3300004156\|Ga0062589_100744630	Not Available	878	Open in IMG/M
3300004157\|Ga0062590_100702809	Not Available	911	Open in IMG/M
3300004157\|Ga0062590_102249611	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	572	Open in IMG/M
3300004479\|Ga0062595_100499220	Not Available	913	Open in IMG/M
3300005093\|Ga0062594_102696909	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	550	Open in IMG/M
3300005290\|Ga0065712_10807947	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	510	Open in IMG/M
3300005294\|Ga0065705_10322213	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300005295\|Ga0065707_10344902	Not Available	927	Open in IMG/M
3300005295\|Ga0065707_10391489	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	864	Open in IMG/M
3300005328\|Ga0070676_10005450	All Organisms → cellular organisms → Bacteria	6779	Open in IMG/M
3300005334\|Ga0068869_101971644	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	524	Open in IMG/M
3300005337\|Ga0070682_101701858	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	548	Open in IMG/M
3300005344\|Ga0070661_100363745	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1137	Open in IMG/M
3300005366\|Ga0070659_101295640	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	646	Open in IMG/M
3300005434\|Ga0070709_11002957	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	664	Open in IMG/M
3300005437\|Ga0070710_10849991	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	655	Open in IMG/M
3300005438\|Ga0070701_10069091	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1884	Open in IMG/M
3300005444\|Ga0070694_100228369	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1399	Open in IMG/M
3300005455\|Ga0070663_101173099	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	674	Open in IMG/M
3300005456\|Ga0070678_100333476	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300005456\|Ga0070678_100658288	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	940	Open in IMG/M
3300005459\|Ga0068867_101985741	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	550	Open in IMG/M
3300005466\|Ga0070685_11340043	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	548	Open in IMG/M
3300005548\|Ga0070665_100997603	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	850	Open in IMG/M
3300005617\|Ga0068859_102171156	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	613	Open in IMG/M
3300005840\|Ga0068870_11279107	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005844\|Ga0068862_101363596	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	712	Open in IMG/M
3300006169\|Ga0082029_1126002	All Organisms → cellular organisms → Bacteria	1318	Open in IMG/M
3300006237\|Ga0097621_100491278	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1111	Open in IMG/M
3300006844\|Ga0075428_101242411	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	784	Open in IMG/M
3300006847\|Ga0075431_100534595	All Organisms → cellular organisms → Bacteria	1161	Open in IMG/M
3300006847\|Ga0075431_101630668	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	602	Open in IMG/M
3300006880\|Ga0075429_100831011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	809	Open in IMG/M
3300006969\|Ga0075419_10165845	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1450	Open in IMG/M
3300007004\|Ga0079218_10600851	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300009094\|Ga0111539_10226693	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300009098\|Ga0105245_12455837	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	574	Open in IMG/M
3300009101\|Ga0105247_11694469	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	522	Open in IMG/M
3300009147\|Ga0114129_11015541	Not Available	1044	Open in IMG/M
3300009147\|Ga0114129_13346209	Not Available	517	Open in IMG/M
3300009148\|Ga0105243_10843079	Not Available	907	Open in IMG/M
3300009148\|Ga0105243_12704963	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	536	Open in IMG/M
3300009156\|Ga0111538_12005769	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	728	Open in IMG/M
3300009789\|Ga0126307_11371667	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	573	Open in IMG/M
3300010038\|Ga0126315_10067591	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1982	Open in IMG/M
3300010042\|Ga0126314_11178060	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	572	Open in IMG/M
3300010045\|Ga0126311_11114952	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	649	Open in IMG/M
3300010403\|Ga0134123_12902061	Not Available	548	Open in IMG/M
3300012509\|Ga0157334_1010875	Not Available	857	Open in IMG/M
3300012519\|Ga0157352_1071558	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	562	Open in IMG/M
3300012896\|Ga0157303_10186555	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	587	Open in IMG/M
3300012904\|Ga0157282_10243392	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	605	Open in IMG/M
3300012971\|Ga0126369_13501869	Not Available	514	Open in IMG/M
3300013100\|Ga0157373_10256904	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300013100\|Ga0157373_11162972	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300013105\|Ga0157369_12058538	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	579	Open in IMG/M
3300013296\|Ga0157374_10529561	Not Available	1185	Open in IMG/M
3300013308\|Ga0157375_10744513	Not Available	1132	Open in IMG/M
3300014969\|Ga0157376_10852748	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	926	Open in IMG/M
3300015262\|Ga0182007_10096244	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	977	Open in IMG/M
3300015371\|Ga0132258_13928402	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1010	Open in IMG/M
3300015372\|Ga0132256_102329287	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	639	Open in IMG/M
3300015373\|Ga0132257_102556455	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	664	Open in IMG/M
3300015374\|Ga0132255_101782674	Not Available	935	Open in IMG/M
3300017792\|Ga0163161_10355271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1166	Open in IMG/M
3300019362\|Ga0173479_10209892	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	828	Open in IMG/M
3300025893\|Ga0207682_10324491	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	723	Open in IMG/M
3300025898\|Ga0207692_10301165	Not Available	976	Open in IMG/M
3300025899\|Ga0207642_10329510	Not Available	894	Open in IMG/M
3300025904\|Ga0207647_10249386	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1019	Open in IMG/M
3300025909\|Ga0207705_10876826	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	696	Open in IMG/M
3300025917\|Ga0207660_10507402	Not Available	979	Open in IMG/M
3300025919\|Ga0207657_10138208	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1992	Open in IMG/M
3300025932\|Ga0207690_11723017	Not Available	523	Open in IMG/M
3300025934\|Ga0207686_10073325	All Organisms → cellular organisms → Bacteria	2208	Open in IMG/M
3300025935\|Ga0207709_10514854	Not Available	936	Open in IMG/M
3300025935\|Ga0207709_10839118	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	744	Open in IMG/M
3300025937\|Ga0207669_10410323	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	1063	Open in IMG/M
3300025938\|Ga0207704_10958762	Not Available	722	Open in IMG/M
3300026075\|Ga0207708_11293650	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	639	Open in IMG/M
3300026121\|Ga0207683_10637069	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	987	Open in IMG/M
3300027637\|Ga0209818_1043643	Not Available	1065	Open in IMG/M
3300028589\|Ga0247818_10376075	Not Available	954	Open in IMG/M
3300028809\|Ga0247824_10326198	Not Available	870	Open in IMG/M
3300031847\|Ga0310907_10619633	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	591	Open in IMG/M
3300031858\|Ga0310892_10909167	Not Available	616	Open in IMG/M
3300031908\|Ga0310900_11186796	Not Available	634	Open in IMG/M
3300031996\|Ga0308176_12656001	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	533	Open in IMG/M
3300032002\|Ga0307416_101201870	Not Available	864	Open in IMG/M
3300032002\|Ga0307416_102380058	Not Available	629	Open in IMG/M
3300032012\|Ga0310902_10470045	Not Available	814	Open in IMG/M
3300032012\|Ga0310902_10525435	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	775	Open in IMG/M
3300032013\|Ga0310906_10355332	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	954	Open in IMG/M
3300032075\|Ga0310890_11740984	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	517	Open in IMG/M
3300032122\|Ga0310895_10084315	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1258	Open in IMG/M
3300032179\|Ga0310889_10142168	Not Available	1066	Open in IMG/M
3300032421\|Ga0310812_10266930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	756	Open in IMG/M
3300032421\|Ga0310812_10482679	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	558	Open in IMG/M
3300033551\|Ga0247830_10644659	Not Available	840	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.48%
Environmental	Environmental	47.52%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.48%
Terrestrial	Environmental → Terrestrial	47.52%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.52%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.84%
Roots	Host-Associated → Plants → Roots	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	24.75%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.89%
Loam	Environmental → Terrestrial → Soil → Loam	8.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.96%
Soil	Host-Associated → Plants → Rhizoplane → Soil	2.97%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	24.75%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.83%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	12.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.91%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	2.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.98%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	12.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.91%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.94%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.95%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.95%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.96%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.97%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	2.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.97%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.99%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.99%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2067725004	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012519	Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610	Environmental	Open in IMG/M
3300012896	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKC_07360010	2067725004	Soil	MKEDELDERTREALRGYRVPPEAPLDEMWDAIEQRHFGTPVVALADHVQARRRSVRRWRVGAPSWGILVAGMAAMLILGVGLGRVSRGVAPVVDPREGDYAW
ICChiseqgaiiDRAFT_21143241	3300000033	Soil	MDERTREALRGYRVPPPAPLDDMWDAIEQRHFGTPVXALADHPKAKARGKGIRRWFGPPSWAVVVAGMAATLMIGVSIGRMS
Ga0062589_1007446302	3300004156	Soil	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGGPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADNGREGHYDYWTANAEPYRQATTEYLGQTVA
Ga0062590_1007028091	3300004157	Soil	MTEDEMDERTREALRGYRVPPAPPLDAMWEAIEERHFGTPVVSLSGRADERGRAARRWRLGAPSWGVLVAGMAAALILGVLVGRGSRGIAPVTPPEGRYD
Ga0062590_1022496112	3300004157	Soil	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGAPVVALTDHGKSRDRVVRAERARRRWRFGAPSWAVLVAGMAAAMILGVGLGRMSRGIAPVVAGPPEG
Ga0062595_1004992202	3300004479	Soil	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGGPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGI
Ga0062594_1026969092	3300005093	Soil	MKEDELDERTREALRGYRVPPAPPLDAMWQRIEERHFGAPVVSLADRARSRPGRRWDLGSPSWGALIAAIAAALIIGVAIGRTSRGIVPVIADNGREGQY
Ga0065712_108079472	3300005290	Miscanthus Rhizosphere	MTEDEMDEGTREALRGYRVPPEPPLDEMWDAIEARHFGAPVVALTDRAPARGRSSRRWRLGAPSWRVLV
Ga0065705_103222131	3300005294	Switchgrass Rhizosphere	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGPPVVSLADRARSRPARGWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADNGREGHYDYWTANAEPYRQATTEYLGQTVALLTAL
Ga0065707_103449021	3300005295	Switchgrass Rhizosphere	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGAPVVALADHGKSRDRAVRAERAPRRWRLGAPSWGVLVAGMAAALILGVGL
Ga0065707_103914891	3300005295	Switchgrass Rhizosphere	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGPPVVSLADRVRSRPARRWTFGSPSWSVLTAGIAAALMLGVAI
Ga0070676_100054501	3300005328	Miscanthus Rhizosphere	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGGPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADNGRE
Ga0068869_1019716441	3300005334	Miscanthus Rhizosphere	MKENELDERTREALRGYRAPPAPPLEAMWQQIEERHFGAPVVSLADHARSRPRQRWAFGSPSWSVL
Ga0070682_1017018582	3300005337	Corn Rhizosphere	MKEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGPPVVSLADRARSRPARGWTFGSPSWSVLTAGIAAA
Ga0070661_1003637453	3300005344	Corn Rhizosphere	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGPPVVSLADRVRSRPARRWTFGSPSWSVLTAGIAAALMLGVA
Ga0070659_1012956401	3300005366	Corn Rhizosphere	MTDMTEDEMDERTREALRGYRVPPEAPLDAMWDAIEARHFGAPVVSLTDRAPTRGRTGRRWRLGAPSWGVLVVGMAA
Ga0070709_110029571	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKEDELDERTREALRGYRVPPSPPLDAMWERIEERHFGAPVVSLTDHARSRPRRRWAFGAPSWSI
Ga0070710_108499911	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKEDELDERTREALRGYRVPPSPPLDAMWERIEERHFGAPVVSLTNHARSRPRRRWAFGAPSWSIVIAGIA
Ga0070701_100690913	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGAPVVALADHGKSRDRAVRAERAPRRWRLGAPSWGVLVAGMAA
Ga0070694_1002283693	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGSPVVALTDHGKSRGRAVRAERAQRRWRFGAPSWGVLVAGMAAAMILGVGLGRVSRGIAPVVAGPPEGTY
Ga0070663_1011730991	3300005455	Corn Rhizosphere	MTEDEMDERTREALRGYRVPPEPPLDEMWDAIEARHFGAPVVALTDRAPARGRPSRRWRLGAPSWGVLVVGM
Ga0070678_1003334763	3300005456	Miscanthus Rhizosphere	MKEYELDERTREALRGYRVPPAPPLDAMWERIEERHFGAPVVALADHGRSRPQRRWAFGSPSWSVLV
Ga0070678_1006582882	3300005456	Miscanthus Rhizosphere	MTDMPEDEMDERTREALRGYRVPPEAPLDAMWDAIEARHFGAPVVSLTDRAPTRGRTGRRWRLGAPSWGVLVVGMAATLLVGVGVGRMSNS
Ga0068867_1019857411	3300005459	Miscanthus Rhizosphere	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGGPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAAL
Ga0070685_113400431	3300005466	Switchgrass Rhizosphere	MDEELDERTREALRGYRVPPEAPLDEMWEAIEERHFGPPVVALTDHGKSRDRVVRAERAQRRWRFGAPSWGVLVAGMAAAMILGVGLGRMSRGIAPVVAGPPEGTYDYWTANAEPYRD
Ga0070665_1009976032	3300005548	Switchgrass Rhizosphere	MKEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGAPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADNGRE
Ga0068859_1021711561	3300005617	Switchgrass Rhizosphere	MTEDEMDERTREALRGYRVPPEPPLDEMWDAIEARHFGAPVVALTDRAPARGRSSRRWRLGAPSWGVLV
Ga0068870_112791072	3300005840	Miscanthus Rhizosphere	MTDMTEDEMDERTREALRGYRVPPEAPLDEMWEAIEERHFGSPVVALTDHGKSRGRAVRRERAQRRWRFGAPSWAVLVAGMAAAMILGVGLGRMSRGIAPVVAGPPEGTYDYWTANAEPYRD
Ga0068862_1013635962	3300005844	Switchgrass Rhizosphere	MTEDEMDEGTREALRGYRVPPEPPLDEMWDAIEARHFGAPVVALTDRAPARGRSSRRWRLGAPSWGVLV
Ga0082029_11260021	3300006169	Termite Nest	MDDELDERTREALRGYRVPPEPPMDAMWEAIEERHFGPPVVAISSRTAASNDPDRVGRRRRLGAPTWGIVLAAVAASLLIG
Ga0097621_1004912782	3300006237	Miscanthus Rhizosphere	MTDMTEDEMDERTREALRGYRVPPEAPLDAMWDAIEARHFGAPVVSLTDRAPTRGRTGRRWRLGAPSWGVLVVGMAATLLVGIGVGRMSHSIAPVYTA
Ga0075428_1012424112	3300006844	Populus Rhizosphere	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGAPVVSLADRARSRPARRWTFGSPSWSVLTAGIAA
Ga0075431_1005345952	3300006847	Populus Rhizosphere	MHMDDELDERTREALRGYRVPPEPPLDEMWEAIEERHFGAPVVALDDHGKSRDRAGRADRARRRWRFGAPSWGVLVAGMAAALILGVGLGRMSRGIAPVVAGAPEGTYDYWTAN
Ga0075431_1016306681	3300006847	Populus Rhizosphere	MDDELDERTREALRGYRVPPEPPLDTMWDAIEERHFGAPVVAISSRTPASSGFDRVGRRRLGTPTWGI
Ga0075429_1008310111	3300006880	Populus Rhizosphere	MKEDELDERTREALRGYRVPPAPPLDAMWQDIEERHFGAPVVSLTDRPGSGDRAGRRWSLGSPSWGVLVSGIAAALIIGIGVGRMSRGIAPVVPDNGIEGTYTYWTANA
Ga0075419_101658453	3300006969	Populus Rhizosphere	MHMDDELDERTREALRGYRVPPEPPLDEMWEAIEERHFGAPVVALDDYGKSGDRAGRADRARRRWRFGAPSWGVLVAGMAAALILGVGLGRMSRG
Ga0079218_106008512	3300007004	Agricultural Soil	MDDELDERTREALRGYRVPPEPPLDEMWEAIEERHFGAPVVALADHEKSGDRAVRARRRWRLGAPSWSVLIAGMAAALILGVGLGRMSRGIAPVVAGPPEGT
Ga0111539_102266931	3300009094	Populus Rhizosphere	MKEDELDERTREALRGYRVPPAPPLDAMWQRIEERHFGAPVVSLADRARSRPGRRWALGSPSWGVLIAGIAAALIIGVAIGRTSRGIVPVIPDNGREGQYDY
Ga0105245_124558371	3300009098	Miscanthus Rhizosphere	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGAPVVALADHGKSRDRAVRAERAPRRWRLGAPSWGVLVAGMAAALNLGVGLGRVSRGIAPVVAGPPEGTYDYWTANAEPYR
Ga0105247_116944691	3300009101	Switchgrass Rhizosphere	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGAPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADNGREGH
Ga0114129_110155412	3300009147	Populus Rhizosphere	MHMDDELDERTREALRGYRVPPEPLLDEMWEAIEERHFGAPVVALADHGKSRDRTVRAERAHRRWRLG
Ga0114129_133462092	3300009147	Populus Rhizosphere	MTDEELDERTREALRGYRVPPPAPLDDMWDAIEERHFGSPVVAISSRAPLAERSDRAGRRRRLGSPTWAIVL
Ga0105243_108430791	3300009148	Miscanthus Rhizosphere	MKEDELDERTREALRGYRAPPAPPLDAMWRQIEERHFGAPVVSLADRARARPRWRWALGSPSWGVLVAGIAAALI
Ga0105243_127049632	3300009148	Miscanthus Rhizosphere	MDEELDERTREALRGYRVPPEAPLDEMWEAIEERHFGSPVVALTDHGKSRDRAVRAARAPRRWRFGAPSWGVLVAGMAAAMILGVGLG
Ga0111538_120057691	3300009156	Populus Rhizosphere	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGAPVVSLADRARSRPARRWTFGSPSW
Ga0126307_113716671	3300009789	Serpentine Soil	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGASVVALTDHGKSRDRAVRAERGQRRWRLSAPSWSVLVAGMAAAMVLGVGLGRMSRGIAPVVAGPPEGTYDYWTANAEPYRDATTQYLGETVALLASLPAAARDGQPDARFVTQAGELL
Ga0126315_100675913	3300010038	Serpentine Soil	MDDELDERTREALRGYRVPPEPPLDEMWEAIEERHFGALVVALTGHGKSRDRAVRAARAQRRWRFGAPSWGVLVAGMAAALILGVGLGRMSRGIAPVVAGPPEGTYDYWTADAEPYRDAT
Ga0126314_111780601	3300010042	Serpentine Soil	MTEDEMDERTREALRGYRVAPEPPLDEMWDAIEERHFGTSVVSLTGRANERGRAARAERRLRLGAPSWGVLVAGMAAMLILGIGVGRMSRGVAPVVATAPEGVYDYWTANAEPYRDATTEYLGQTVALLTALP
Ga0126311_111149522	3300010045	Serpentine Soil	MTDMTEDEMDERTREALRGYRVPPEAPLDAMWDAIEARHFGVPVVSLTDRAPARGRPPRRWRLGAPSWSVLVVGMAATLLVGVG
Ga0134123_129020612	3300010403	Terrestrial Soil	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGAPVVALTDHGKSRDRAVRAERAPRRWRLGAP
Ga0157334_10108751	3300012509	Soil	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGAPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAA
Ga0157352_10715582	3300012519	Unplanted Soil	MDMTEDEMDERTREALRGYRVPPEPPLDEMWDAIEARHFGAPVVALTDRAPARGRSSRRWRLGAPSWGVLVVGMAATLLL
Ga0157303_101865551	3300012896	Soil	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGPPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLG
Ga0157282_102433922	3300012904	Soil	MDEELDERTREALRGYRVPPEAPLEEMWEAIEERHFGTPVVSLSGRADERGRAARRWRLGAPSWGVLVAGMAAALILGVLVGRGSRGIAPVTPP
Ga0126369_135018692	3300012971	Tropical Forest Soil	MKEDELDERTREALRGYRVPPAPPLDAMWEQIEERHFGAPVVSLADHARSRPGRRWAFGSPSWGVLIAGIAAALVVGISVGRMSRGIVPVIADNGREGQYDYWTANAAPYRDTTTEYLGQTVALLTAL
Ga0157373_102569043	3300013100	Corn Rhizosphere	MKEDELDERTREALRGYRAPPAPPLDAMWRQIEERHFGAPVVSLADRARARPRWRWALDSPSWGVLVAGIAAA
Ga0157373_111629722	3300013100	Corn Rhizosphere	MMDDELDERTREALRGYRVPPSPPLDEMWDSIEERHFGAPVVALVDRASSRDRSRAWSRFGAPSWGVLVSSVAAALVIGVG
Ga0157369_120585381	3300013105	Corn Rhizosphere	MTEDEMDEGTREALRGYRVPPAPPLDAMWQQIEDRHFGPPVVSLADRVRSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADNGREGHYDYWT
Ga0157374_105295613	3300013296	Miscanthus Rhizosphere	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGAPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADNGR
Ga0157375_107445131	3300013308	Miscanthus Rhizosphere	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGAPVVALADHGKSRDRAVRAERAPRRWRLGAPSWGVLVAGMAAALILGVGLGRVSRGIAPVVAGPPEGTYDYWTANAEPYRDAT
Ga0157376_108527481	3300014969	Miscanthus Rhizosphere	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGAPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADNGREGHYDYWTANTEPYRQATTEYLGQTVA
Ga0182007_100962443	3300015262	Rhizosphere	MKEDDLDERTREALRGYRVPPAPPLDAMWQRIEERHFGAPVVSLADHARSRPGRRWGFGSPS
Ga0132258_139284022	3300015371	Arabidopsis Rhizosphere	MTDDELDERTREALRGYRVPPEPPLDDMWEAIEDRHFGAPVIALVDAASSRSRATSQSRFRSPSWGVLVASIA
Ga0132256_1023292871	3300015372	Arabidopsis Rhizosphere	MTDDELDERTREALRGYRVPPEPPLDDMWEAIEDRHFGAPVIALVDAASSRSRATSQSRFRSPSWGVLV
Ga0132257_1025564552	3300015373	Arabidopsis Rhizosphere	MTEDEMDERTREALRGYRVPPEPPLDEMWDAIETRHFGPAVVSLADRTPARGGAARRWRLGAPSWSVLVVGMAATLLLGIG
Ga0132255_1017826741	3300015374	Arabidopsis Rhizosphere	MTEDELDERTREALRGYRVPPAPSLDEMWQQIEERHFGAPVVSLVDRAQSRGGIARRRWFAAPSWGIVVAAIAASLILGVVVGRMSRGIAPVIADNGREGQDDYWTANAEPY
Ga0163161_103552711	3300017792	Switchgrass Rhizosphere	MKEDELDERTREALRGYRAPPAPPLDAMWRQIEERHFGAPVVSLADHARSRPRQRWAFGSPSWSVLIAGVAAAL
Ga0173479_102098921	3300019362	Soil	MTEDEMDERTREALRGYRVPPEPPLDEMWDAIEARHFGAPAVALTDRAPARGRSSRRWRLGAPSWGVLVVGMAAT
Ga0207682_103244911	3300025893	Miscanthus Rhizosphere	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGAPVVALADHGKSRDRAVRAERAPRRWRLGAPSWGVLVAGMAAALILGVGLGRVSRGI
Ga0207692_103011652	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKEDELDERTREALRGYRVPPSPPLDAMWERIEERHFGAPVVSLTNHARSRPRRRWAFGAPSWSIVIAGIAAALILGV
Ga0207642_103295101	3300025899	Miscanthus Rhizosphere	MKEDELDERTREALRGYRAPPAPPLDAMWRQIEERHFGAPVVSLADRARARARWRWALGSPSWGVLVAGIAAALIMGVAVG
Ga0207647_102493862	3300025904	Corn Rhizosphere	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGPPVVSLADRVRSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADNGRE
Ga0207705_108768262	3300025909	Corn Rhizosphere	MKEDELNERTREALRGYRVPPAPPLDAMWERIEERHFGAPVVSLADHARSRPRRRWAFGSPSWSVLVAGIAAA
Ga0207660_105074022	3300025917	Corn Rhizosphere	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGAPVVALADHGKSRDRAVRAERAPRRWRLGAPSWGVLVAGMAAALILGVGLGRVSRGIAPVVA
Ga0207657_101382083	3300025919	Corn Rhizosphere	MKEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGGPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADNGREGQYDYWTANAEPYRQATTEYLGQTVALLTA
Ga0207690_117230171	3300025932	Corn Rhizosphere	MTDMTEDEMDERTREALRGYRVPPEAPLDAMWDAIEARHFGAPVVSLTDRAPTRGRTGRRWRLGAPS
Ga0207686_100733251	3300025934	Miscanthus Rhizosphere	MKEDELDERTREALRGYRAPPAPPLDAMWRQIEERHFGAPVVSLADRARARPRWRWALGSPSWGVLVAGIAAA
Ga0207709_105148541	3300025935	Miscanthus Rhizosphere	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGSPVVALTDHGKSRDRAVRAARAPRRWRFGAPSWGVLVAGMAAAMI
Ga0207709_108391182	3300025935	Miscanthus Rhizosphere	MKEDELDERTREALRGYRAPPAPPLDAMWRQIEERHFGAPVVSLADRARARPRWRWALGSPSWGVLVA
Ga0207669_104103232	3300025937	Miscanthus Rhizosphere	MKEDELDERTTEALRGYRVPPAPPLDAMWQQIEERHFGAPVVSLADHARSRPERRRAFGSPSWSVLIAGIAAALIIGVA
Ga0207704_109587622	3300025938	Miscanthus Rhizosphere	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGAPVVALADHGKSRDRAVRAERAPRRWRLGAPSWGVLVAGMAAALILGVGLGRVSRGIAPVVAGPPEGTY
Ga0207708_112936501	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MKEDELDERTREALRGYRVPPAPPLDAMWQRIEERHFGAPVVSLADRARSRPGRRWDLGSPSWGALIAAIAAALIIGVAIGRTSRGI
Ga0207683_106370692	3300026121	Miscanthus Rhizosphere	MTEDEMDERTREALRGYRVPPEAPLDAMWDAIEARHFGAPVVSLTDRAPTRGRTGRRWRLGAPSWGVLVVGMAATLLVGVGVGRMSNSIAP
Ga0209818_10436433	3300027637	Agricultural Soil	MSENEMDERTREALRGYRAPPEPPLDEMWEAIEARHFGAPVVAISSRAARADRTGRVERHRRLAAPTWGIVLAAIAAALL
Ga0247818_103760752	3300028589	Soil	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGAPVVALADHGKSRDRAVRAERAPRRWRLGAPSWGVLVAGMAAALILGVGLGRVSRGIAPVVAGPPEGTYDYWTANAEPY
Ga0247824_103261981	3300028809	Soil	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGAPVVALADHGKSRDRAVRAERAPRRWRLGAPSWGVLVAGMAAALILGVGLGRVSRGIAPVVAGPPEGTYDYWTANAEPYRDATTEY
Ga0310907_106196331	3300031847	Soil	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGAPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADN
Ga0310892_109091672	3300031858	Soil	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGAPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIA
Ga0310900_111867961	3300031908	Soil	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGAPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADNGREGQYDYWTANAE
Ga0308176_126560011	3300031996	Soil	MNDDELDERTREALRGYRVPPEPPLDAMWEAIDERHFGAPVVSLVDHAEARGGRARRTRFGAPSWGVLVAGVAAALIIGVGIGR
Ga0307416_1012018701	3300032002	Rhizosphere	MSEDEMDEQTREALRGYRVSPTPPLEEMWENIESRHFGAPVISLDDRAAARGRAARRWRLGAPSWGVLVAGMAAMLVIGVGVGRMSRAVAPVVAGAREGTYDYWTANAE
Ga0307416_1023800582	3300032002	Rhizosphere	MTEDEMDERTREALRGYRVPPAAPLDEMWDAIEQRHFGTPVVALVDRAKARGEGRPEPRRRRFGAPSWT
Ga0310902_104700451	3300032012	Soil	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGAPVVALADHGKSRDRAVRAERAPRRWRLGAPSWGVLVAGMAAALILGVG
Ga0310902_105254351	3300032012	Soil	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGAPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADNGREGQY
Ga0310906_103553322	3300032013	Soil	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGAPVVSLADRARSRPARRWTFGSPSWSVLTAGIAAALMLGVAIGRTSRGIVPVIADNGREGQYDYWTAN
Ga0310890_117409842	3300032075	Soil	MDEELDERTREALRGYRVPPEAPLDEMWEAIEERHFGPPAVALNDHGKSRGRAVRAERAQRRWRFGAPSWGVLVAGMAAAMILGVGLGRMSRGIAP
Ga0310895_100843153	3300032122	Soil	MDDELDERTREALRGYRVPPEAPLDEMWEAIEERHFGAPVVALADHGKSRDRAVRAERAPRRWR
Ga0310889_101421683	3300032179	Soil	MTEEELDERTREALRGYRVPPAPPLDAMWQQIEDRHFGAPVVSLADRARSRPARRWTFGSPSWSVL
Ga0310812_102669301	3300032421	Soil	MTEDEMDERTREALRGYRVPPEAPLDAMWDAIEARHFGAPVVSLTDRAPASGRTGRRWRLGPPSWSVLVVGMAATLLVGIGVGRMSPSIAPIYTAQNTDEG
Ga0310812_104826791	3300032421	Soil	MKEYELDERIREALRGYRVPPAPPLDAMWERIEERHFGAPVVALADHGRSRPQRRRAFGSPSWSVLVAGIAAALILGIAVG
Ga0247830_106446592	3300033551	Soil	MDEELDERTREALRGYRVPPEAPLDEMWEAIEERHFGSPVVALTDHGKSRGRAVRAERARRRWRFGAPSWAVLVAGMAAAMILG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103865

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences