Metagenome / Metatranscriptome Family F103931

Basic Information
Family ID	F103931
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	93 residues
Representative Sequence	MLDPLTAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA
Number of Associated Samples	80
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.93 %
% of genes near scaffold ends (potentially truncated)	23.76 %
% of genes from short scaffolds (< 2000 bps)	97.03 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (73.267 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.772 % of family members)
Environment Ontology (ENVO)	Unclassified (28.713 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (73.267 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 84.95% β-sheet: 0.00% Coil/Unstructured: 15.05%
Feature Viewer

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Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF13467	RHH_4	14.85
PF10691	DUF2497	1.98
PF01522	Polysacc_deac_1	0.99
PF09335	SNARE_assoc	0.99
PF06411	HdeA	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.99
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.99
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.99
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.99

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.27 %
All Organisms	root	All Organisms	26.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.27 %
cellular organisms	root	All Organisms → cellular organisms	26.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.27 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	26.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.27 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	15.84 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.27 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.90 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.27 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.92 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.27 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.95 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.27 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.97 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.27 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	1.98 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.99 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	73.27 %
Bradyrhizobium jicamae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	1.98 %
Bradyrhizobium sp. JYMT SZCCT0428	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	0.99 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459002\|FZY7DQ102JBSK7	Not Available	518	Open in IMG/M
2189573000\|GPBTN7E02JBJ64	Not Available	501	Open in IMG/M
2189573003\|GZIR7W401A2OOX	Not Available	507	Open in IMG/M
2189573004\|GZGWRS401A5QK6	Not Available	515	Open in IMG/M
3300002245\|JGIcombinedJ26739_100399933	Not Available	1252	Open in IMG/M
3300005332\|Ga0066388_101803351	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300005335\|Ga0070666_11019280	Not Available	614	Open in IMG/M
3300005436\|Ga0070713_102492902	Not Available	500	Open in IMG/M
3300005437\|Ga0070710_10483276	Not Available	845	Open in IMG/M
3300005549\|Ga0070704_101433927	Not Available	634	Open in IMG/M
3300005764\|Ga0066903_103006420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	913	Open in IMG/M
3300005764\|Ga0066903_103522575	Not Available	843	Open in IMG/M
3300006163\|Ga0070715_10952314	Not Available	532	Open in IMG/M
3300006173\|Ga0070716_101760603	Not Available	512	Open in IMG/M
3300006871\|Ga0075434_101886038	Not Available	604	Open in IMG/M
3300009098\|Ga0105245_11982023	Not Available	636	Open in IMG/M
3300009148\|Ga0105243_12461079	Not Available	559	Open in IMG/M
3300009156\|Ga0111538_10490126	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300010043\|Ga0126380_10817975	Not Available	764	Open in IMG/M
3300010047\|Ga0126382_11203168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300010048\|Ga0126373_13221902	Not Available	508	Open in IMG/M
3300010371\|Ga0134125_10309229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1755	Open in IMG/M
3300010373\|Ga0134128_11384846	Not Available	775	Open in IMG/M
3300010376\|Ga0126381_103306978	Not Available	636	Open in IMG/M
3300010376\|Ga0126381_103559522	Not Available	611	Open in IMG/M
3300010376\|Ga0126381_103849929	Not Available	586	Open in IMG/M
3300010379\|Ga0136449_100274718	All Organisms → cellular organisms → Bacteria → Proteobacteria	3102	Open in IMG/M
3300010379\|Ga0136449_103868434	Not Available	562	Open in IMG/M
3300010398\|Ga0126383_10793958	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	1029	Open in IMG/M
3300010398\|Ga0126383_11796375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	702	Open in IMG/M
3300012180\|Ga0153974_1086292	Not Available	706	Open in IMG/M
3300012181\|Ga0153922_1154669	Not Available	538	Open in IMG/M
3300012957\|Ga0164303_10556886	Not Available	746	Open in IMG/M
3300012957\|Ga0164303_11065535	Not Available	581	Open in IMG/M
3300012960\|Ga0164301_11283612	Not Available	593	Open in IMG/M
3300012961\|Ga0164302_11023265	Not Available	646	Open in IMG/M
3300012984\|Ga0164309_10965703	Not Available	699	Open in IMG/M
3300012985\|Ga0164308_12110125	Not Available	525	Open in IMG/M
3300012988\|Ga0164306_11338619	Not Available	606	Open in IMG/M
3300013307\|Ga0157372_11129213	Not Available	906	Open in IMG/M
3300015371\|Ga0132258_10631395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae	2692	Open in IMG/M
3300016294\|Ga0182041_10949284	Not Available	775	Open in IMG/M
3300016341\|Ga0182035_11290101	Not Available	654	Open in IMG/M
3300016341\|Ga0182035_11398010	Not Available	628	Open in IMG/M
3300016371\|Ga0182034_10245957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1408	Open in IMG/M
3300016371\|Ga0182034_10686891	Not Available	869	Open in IMG/M
3300016387\|Ga0182040_11529157	Not Available	567	Open in IMG/M
3300016404\|Ga0182037_10885517	All Organisms → cellular organisms → Bacteria → Proteobacteria	773	Open in IMG/M
3300016422\|Ga0182039_11264803	Not Available	668	Open in IMG/M
3300016422\|Ga0182039_12101811	Not Available	520	Open in IMG/M
3300017822\|Ga0187802_10087761	All Organisms → cellular organisms → Bacteria → Proteobacteria	1164	Open in IMG/M
3300017933\|Ga0187801_10193812	All Organisms → cellular organisms → Bacteria → Proteobacteria	803	Open in IMG/M
3300017955\|Ga0187817_10103876	All Organisms → cellular organisms → Bacteria	1789	Open in IMG/M
3300017970\|Ga0187783_10903055	Not Available	637	Open in IMG/M
3300020579\|Ga0210407_11018005	Not Available	631	Open in IMG/M
3300020580\|Ga0210403_11099835	Not Available	617	Open in IMG/M
3300020582\|Ga0210395_10206905	All Organisms → cellular organisms → Bacteria	1472	Open in IMG/M
3300020582\|Ga0210395_11019391	Not Available	613	Open in IMG/M
3300020583\|Ga0210401_10400455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. JYMT SZCCT0428	1235	Open in IMG/M
3300020583\|Ga0210401_10594754	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300021171\|Ga0210405_10379382	Not Available	1114	Open in IMG/M
3300021180\|Ga0210396_10169086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1960	Open in IMG/M
3300021180\|Ga0210396_11385406	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300021401\|Ga0210393_11115450	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300021403\|Ga0210397_11009302	Not Available	646	Open in IMG/M
3300021404\|Ga0210389_10905068	Not Available	687	Open in IMG/M
3300021406\|Ga0210386_10989449	Not Available	718	Open in IMG/M
3300021474\|Ga0210390_10289415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1388	Open in IMG/M
3300021477\|Ga0210398_10851130	Not Available	733	Open in IMG/M
3300021559\|Ga0210409_11187002	Not Available	639	Open in IMG/M
3300021560\|Ga0126371_12352812	Not Available	644	Open in IMG/M
3300021560\|Ga0126371_12695221	Not Available	602	Open in IMG/M
3300021560\|Ga0126371_13767844	Not Available	511	Open in IMG/M
3300025898\|Ga0207692_10622769	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300025915\|Ga0207693_11092912	Not Available	606	Open in IMG/M
3300027895\|Ga0209624_10899343	Not Available	578	Open in IMG/M
3300027908\|Ga0209006_10551726	Not Available	956	Open in IMG/M
3300029636\|Ga0222749_10313078	Not Available	814	Open in IMG/M
3300031231\|Ga0170824_125517883	Not Available	608	Open in IMG/M
3300031573\|Ga0310915_10453154	Not Available	912	Open in IMG/M
3300031718\|Ga0307474_10363160	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300031719\|Ga0306917_11017932	Not Available	647	Open in IMG/M
3300031833\|Ga0310917_10857230	Not Available	612	Open in IMG/M
3300031879\|Ga0306919_10057721	All Organisms → cellular organisms → Bacteria → Proteobacteria	2599	Open in IMG/M
3300031890\|Ga0306925_11036755	Not Available	834	Open in IMG/M
3300031890\|Ga0306925_11042312	Not Available	831	Open in IMG/M
3300031910\|Ga0306923_11697773	Not Available	653	Open in IMG/M
3300031910\|Ga0306923_11912622	Not Available	605	Open in IMG/M
3300031912\|Ga0306921_10330478	Not Available	1784	Open in IMG/M
3300031945\|Ga0310913_10593452	Not Available	786	Open in IMG/M
3300031947\|Ga0310909_10946336	Not Available	706	Open in IMG/M
3300031947\|Ga0310909_11564344	All Organisms → cellular organisms → Bacteria → Proteobacteria	524	Open in IMG/M
3300031954\|Ga0306926_12352673	Not Available	589	Open in IMG/M
3300032059\|Ga0318533_11133986	Not Available	573	Open in IMG/M
3300032076\|Ga0306924_10446988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1477	Open in IMG/M
3300032076\|Ga0306924_11170972	Not Available	834	Open in IMG/M
3300032076\|Ga0306924_12015156	Not Available	595	Open in IMG/M
3300032160\|Ga0311301_12154615	Not Available	642	Open in IMG/M
3300032261\|Ga0306920_101815697	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300032261\|Ga0306920_102534094	Not Available	705	Open in IMG/M
3300032261\|Ga0306920_103886621	Not Available	545	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.09%
Host-Associated	Host-Associated	8.91%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.12%
Plants	Host-Associated → Plants	6.93%
Aquatic	Environmental → Aquatic	2.97%
Fungi	Host-Associated → Fungi	1.98%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.12%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.94%
Freshwater	Environmental → Aquatic → Freshwater	2.97%
Mycelium	Host-Associated → Fungi → Mycelium	1.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.26%
Loam	Environmental → Terrestrial → Soil → Loam	12.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.97%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	47.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.75%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.95%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.98%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.77%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.93%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.97%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.97%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.98%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.98%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.98%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.99%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459002	Grass soil microbial communities from Rothamsted Park, UK - March 2009 direct MP BIO 1O1 lysis 0-21 cm	Environmental	Open in IMG/M
2189573000	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)	Environmental	Open in IMG/M
2189573003	Grass soil microbial communities from Rothamsted Park, UK - FE2 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012180	Attine ant fungus gardens microbial communities from Georgia, USA - TSGA058 MetaG	Host-Associated	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E1_04910510	2170459002	Grass Soil	MLDPLTAAEIQTVRLKLLAFADRQSDQTVRSQCLAVDAKLAEVLEGDNPILRQVLANSVEQLEEALRWAARSTIEKATFYFLTGLRRRGSLSA
N55_08067010	2189573000	Grass Soil	MLDPLTAAEIQTVRPRLVAFANRHSDQTVRSQCLAVEAKLAEVLEGDDPIRRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA
FE2_02821980	2189573003	Grass Soil	MLDPLTTAEIQALRLKLQLFASRQSDATVRSQCLAVDTRLTEVLEGDDPILRQILANSVEQLEEAVRWATRSAIEKATMHFLTGFRR
FG2_06918740	2189573004	Grass Soil	RLKLVAFANRHGDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRSSLSA
JGIcombinedJ26739_1003999333	3300002245	Forest Soil	MLDPLTTAEIQALRLKLQLFASRQSDATVRSQCLAVDTKLAEALEGDDPILRQVLANSVEQLEEALRWAACSTIEKATMHFLTGLRRRGSLSA*
Ga0066388_1018033514	3300005332	Tropical Forest Soil	MLDPLIAAEIQTVRLKLVAFTDRQSDQTVRSQCLAVDARLAEVLEGDDPILRQVLANSVEQLEEALRWAARSTIEKATFH
Ga0070666_110192801	3300005335	Switchgrass Rhizosphere	MLDPLITAEIQTVRLKLVAFTDRQSDRTVRSQCLAVGARLAEVLEGDDPILRQALADSVEQLEEALRWAARSTIEKATFHFLTGLRHRGSLSAQGARRSLAVE*
Ga0070713_1024929021	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VATLLDPLTAAEIQTVRLKLVAFTDRQSDRTVRSRCLAVDAKLAEVLEGDDPILRQALADSVEQLEEALRWAARSTIEKATFHFLTGLRHRGSLSA*
Ga0070710_104832761	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MLDPLITAEIQTVRLKLVAFANRHGDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALPWAARSTIEKATFHFLTGLRRRGSLSA*
Ga0070704_1014339271	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MLDPLITAEIQTVRLKLVAFTDRQSDRTVRSQCLAVGARLAEVLEGDDPILRQALADSVEQLEEALRWAARSTIEKATFHFLTGLPSWQPLGLRSAAILGG*
Ga0066903_1030064202	3300005764	Tropical Forest Soil	MLDPLTAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARSRIEKATFHFLTGLRRLGSLSA*
Ga0066903_1035225751	3300005764	Tropical Forest Soil	MLDPLTAAEIQALRLKLQLFASRQTDATVRSQCHTVDTRLAEVLEGDDPVLRQILANSVEQLEEALRRSTIEKATVRFLTGLRRWGNTAP*
Ga0070715_109523141	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MLDPLITAEIQTVRLKLVAFTDRQSDRTVRSQCLAVGARLAEVLEGDDPILRQALADSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA*
Ga0070716_1017606031	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLDPLTAAEIQTVRLKLVAFANRHGDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA*
Ga0075434_1018860382	3300006871	Populus Rhizosphere	MGVSGLMLDPLITAEIQNVRLKLVAFTDRQSDRTVRSQCLAVGARLAEVLEGDDPILRQALADSVEQLEEALRWAARSTIEKATFHFLTGLPSWQPLGLRSAAILGG*
Ga0105245_119820231	3300009098	Miscanthus Rhizosphere	MLDPLITAEIQTVRLKLVAFTDRQSDRTVRSQCLAVDARLAEVLEGDDQTLRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRHRGSLSA*
Ga0105243_124610791	3300009148	Miscanthus Rhizosphere	MLDPLITAEIQTVRLKLVAFTDRQSDRTVRSRCLAVDARLAEVLEGDDPILRQALADSVEQLEEALRWAARSTIEKATFHFLTGLPSWQPL
Ga0111538_104901264	3300009156	Populus Rhizosphere	MLDSLTAAEIQAVRLKLQLFASRQTDAAVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARSTIEKATFHFLTGLRHRGSLSAQGARRSLAVE*
Ga0126380_108179752	3300010043	Tropical Forest Soil	MRDPLTAAEIQALRLKLQLVASQQTDQTVRTHCRAVDTKLAEILEGDDPILRQILANSVEELEEAVRWATRSTIEKATAQFLRGFRR*
Ga0126382_112031682	3300010047	Tropical Forest Soil	MLDPLTAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRRATRSTIEKATMQFLTGFRRRGSLSA*
Ga0126373_132219021	3300010048	Tropical Forest Soil	RRIPVFMLDPLTAAEIQALRLKLQLIASRQTDATVRSQCLAVDTRLAEVLEGDDPVLRQILANSVEQLEEALRWATRSTIEKATMQFLTGFRR*
Ga0134125_103092292	3300010371	Terrestrial Soil	MLDPLITAEIQTVRLRLVAFTDRQSDRTVRSQCLAVGARLAEVLEGDDPILRQALADSVEQLEEALRWAARSTIEKATFHFLTGLRHRGSLSAQGARRSLAVE*
Ga0134128_113848461	3300010373	Terrestrial Soil	MGVSGLMLDPLITAEIQNVRLKLVAFTDRQSDRTVRSQCLAVGARLAEVLEGDDPILRQALADSVEQLEEALRWAARSTIEKATFHFLTGLRHRGSLSAQGARRSLAVE*
Ga0126381_1033069782	3300010376	Tropical Forest Soil	MLDPLIAAEIQTVRLKLMAFTDRQSDQTVRSQCLAVDARLAEVLEGGDPILHRALANSVQQLEEALRWAARSTIEKATFHFLTGLRQRGSLSA*
Ga0126381_1035595221	3300010376	Tropical Forest Soil	MLDPLTAAEIQALRLKLQLFASRQTDATVRSQCHTVDTRLAEVLEGDDPVLRQILANSVEQLEEALRRSTIEKATVHFLTGLRRWGI*
Ga0126381_1038499291	3300010376	Tropical Forest Soil	MLDPLTSAEIQACRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWATRSTIEKATMQFLTGFRR*
Ga0136449_1002747185	3300010379	Peatlands Soil	LSLAARRSRSLMLDPLTAAEIQTVRLKLLAFADRQSDQTVRSQCLAVDAKLAEVLEGDDSILRQGLANSVERLEEALRWATHSTIEKATFHFLTGLRRRGSLSA*
Ga0136449_1038684341	3300010379	Peatlands Soil	MLDPLTTAEIQALRLKLQLFASRQSDATVRSQCLAVDTKLAEALEGDDPILRQVLANSVEQLEEALRWAARSTIEKATMHFLTGLRRRGSLSA*
Ga0126383_107939583	3300010398	Tropical Forest Soil	SSLMLDPLTAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRRSTIEKATVHFLTGLRRWGI*
Ga0126383_117963751	3300010398	Tropical Forest Soil	IQTLRLKLQLFASRQTDATVRSQCLAVDTKLAEVLEGDDPILRQVLANSVEQLEEALRRATRSTIEKATMQFLTGFRRRGSLSA*
Ga0153974_10862921	3300012180	Attine Ant Fungus Gardens	MLDPLTAAEIQTVRLKLLAFANRQSDQTVRSQCLAVDGKLAEVLEGDNPILRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRHGSLSA*
Ga0153922_11546692	3300012181	Attine Ant Fungus Gardens	MLDPLTAAEIQTVRLKLLAFADRQSDQTVRSRCLAVDAKLAEVLEEDDPILRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRDSLSA*
Ga0164303_105568861	3300012957	Soil	PLTAAEIQTVRLKLVAFTDRQSDRTVRSQYLAVDARLAEVLEGDDPILRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA*
Ga0164303_110655351	3300012957	Soil	MLDPLTAAEIQTVRLKLVAFANRHGDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALRWAARSTIEKATFYFLTGLRRRGSLSA*
Ga0164301_112836122	3300012960	Soil	MLDPLTAAEIQTVRLKLVAFANRHSDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA*
Ga0164302_110232652	3300012961	Soil	MLDPLTAAEIQTVRLKLVAFANRHSDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALPWAARSTIEKATFHLLTGLRRRGSLSA*
Ga0164309_109657031	3300012984	Soil	MLDPLTAAEIQTVRLKLLAFADRQSDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALPWAARSTIEKATFHFLTGLRRRGSLSA*
Ga0164308_121101251	3300012985	Soil	MLDPLTAAEIQTVRLKLVAFANRHSDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALPWAARSTIEKATFHFLTGLRRRGSLSA*
Ga0164306_113386191	3300012988	Soil	MLDPLTAAEIQTVRLKLLAFADRQSDQTVRSQCLGVDAKLAEVLEGDDPIRRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA*
Ga0157372_111292131	3300013307	Corn Rhizosphere	MGVSGLMLDPLITAEIQNVRLKLVAFTDRQSDRTVRSQCLAVDARLAEVLEGDDPILRQALADSVEQLEEALRWAARSTIEKATFHFLTGLRHRGSLSAQGARRSLAVE*
Ga0132258_106313956	3300015371	Arabidopsis Rhizosphere	MQDLLTAAEIQALRLKLLAFADQQSDQSVRFQCAELDARLAEALEGDDTILHQVLANSVERLEEALRRSTIEKATAHFLTGLRRRNGLSA*
Ga0182041_109492841	3300016294	Soil	MLDPPTAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARSRIEKATFHFLTGLRRLGNLSA
Ga0182035_112901012	3300016341	Soil	WASLNESDMMCWRITPPYSSLMLDPLTAAEIQALRLKLQLFASRQTDATVRSQCLDVDTRLAEVLERDDPILRQILADSVEQLEEVLRWAARSTIEKAVMHFLTGIRR
Ga0182035_113980101	3300016341	Soil	MLDPLTAAEIQTVRLKLMAFTDRQSDQTVRSQCLAVDARLAEVLEGDDPILHRVLANSVQQLEEALRWAARSTIEKATFHFLTGLRHRGSLSA
Ga0182034_102459572	3300016371	Soil	MLDPLTAAEIQTVRLKLLAFADRQSDQTVRSQCLAVDAKLAEVLEGDNPILRQILANSVEQLEEALRWAARSTIEKATMHFLTRLRR
Ga0182034_106868911	3300016371	Soil	MLDPLIAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEVLRWAARSRIEKATFHFLTGLRRLGNLSA
Ga0182040_115291571	3300016387	Soil	MKLFLTAAEIQSLRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARSRIEKATFHFLTGLRR
Ga0182037_108855171	3300016404	Soil	MLDPLTAAEIQSLRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARSRIEKATFHFLTGLRRLGNLSA
Ga0182039_112648032	3300016422	Soil	MLDPLTAVEIQAVRLKLQLFASQQTDQTVRSHCRAVDTKLAEILEGDDPILRQILANSVEELDEAVRWATRSTIEKATAQFLRGFRR
Ga0182039_121018111	3300016422	Soil	MLDPLTTAEIQALRLKLQLFASRQSDAAVRSQCLAVDTKLAEVLEGDDPILRQVLANSVEQLEEALRWAARSTTEKATFHFLTGLRHRGSLSA
Ga0187802_100877611	3300017822	Freshwater Sediment	MLDPLTAAEIQTVRLKLVAFANRHSDQTVRSQCLAVDAKLAEVLEGDDPIRRQALANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA
Ga0187801_101938121	3300017933	Freshwater Sediment	MLDPLTAAEIQTVRLKLVAFANRHGDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA
Ga0187817_101038763	3300017955	Freshwater Sediment	MLDPLTAAEIQTVRLKLVAFANRHSDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA
Ga0187783_109030552	3300017970	Tropical Peatland	MLDPPTTAEIQALSLKLQLFASRQTDPVVRSQCLAVDTRLAEVLEGDDPILRQVLANSVEQLEEALRSAASSTIEKATIHFLSGLRGRGSVSA
Ga0210407_110180051	3300020579	Soil	MLDPLTAIEIQTIRLKLLAFADRQSDQTVRSQCLAVDAKLAEVLEGDNPILRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA
Ga0210403_110998351	3300020580	Soil	MLDPLTAIEIQTIRLKLLAFADRQSDQTVRSQCLAVDAKLAEVLEGDNPILRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRG
Ga0210395_102069051	3300020582	Soil	MLDPLTAAEIQTVRLKLVAFANRHSDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALPWAARSTIEKATFHFLTGLRRRGSLSA
Ga0210395_110193911	3300020582	Soil	MLDPLTAAEIQALRLKLHLFISQQTDKAVRSQCFAVDAKLAELLEGDDPILRQVLANSVEQLEEALRWAARSTIEKATVHFLTGLRHHRF
Ga0210401_104004553	3300020583	Soil	MLDPLTAAEIQTVRLKLVAFTDRQSDRTVRSQCLAVDARLAEVLEGDDPILRQVLANSVEQLEEALRWAARSTIEK
Ga0210401_105947542	3300020583	Soil	MSAHFLSLAARRSRSLMLDPLTAAEIQTVRLKLLAFADRQSDQTVRSQCLAVDAKLAEVLEGDDSIFRQGLANSVERLEEALRWTTRSTIEKATFHFLTGLRRRGSLSA
Ga0210405_103793823	3300021171	Soil	AEIQTVRLKLLAFADRQSDQTVRSQCLAVDAKLAEVLEEDDPILRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRDSLSA
Ga0210396_101690862	3300021180	Soil	MLDPLTAAEIQTVRLKLLAFADRQSDQTVRSQCLAVDAKLAEVLEEDDPILRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRDSLSA
Ga0210396_113854061	3300021180	Soil	MSAHFLSLAARRSRSLMLDPLTAAEIQTVRLKLLAFADRQSDQTVRSQCLAVDAKLAEVLEGDDSIFRQGLANSVERLEEALRWTTRSTIE
Ga0210393_111154502	3300021401	Soil	PKLVAFANRHSDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSISA
Ga0210397_110093021	3300021403	Soil	MLDPLTAAEIQTVRLKLVAFANRHGDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALPWAARSTIEKATFHFLTGLRRRGSLSA
Ga0210389_109050681	3300021404	Soil	MLDPLTAAEIQTVRLKLVAFANRHSDQTVRSQGLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA
Ga0210386_109894492	3300021406	Soil	MLDPLTAAEIQTVRLKLLAFADRQSDQTVRSQCLAVDAKLAEVLEGDNPILRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA
Ga0210390_102894152	3300021474	Soil	MLDPLTAAEIQTVRLKLVAFANRHSDQTVRSQCLAVDAKLAEVLEGDDPILRQILANSVEQLEEALRWAARSTIEKATFHFLTGLRRRDSLSA
Ga0210398_108511302	3300021477	Soil	MLDPLTAAEIQALRLKLHLFISQQTDKAVRSQCFAVDAKLAELLEGDDPILRQVLANSVEQLEEALRWAARSTIEKAAVHFLTGLRHH
Ga0210409_111870022	3300021559	Soil	MLDPLTAAEIQTVRLKLVAFANRHGDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRG
Ga0126371_123528121	3300021560	Tropical Forest Soil	MLDPLTAAEIQALRLKLQLFASRQTDATVRSQCHTVDTRLAEVLEGDDPILRQVLANSVEQLEEALRRATRSTIEKATMQFLTGFRR
Ga0126371_126952211	3300021560	Tropical Forest Soil	MLDPLTAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARPTVEKAVMHFLTGLRR
Ga0126371_137678441	3300021560	Tropical Forest Soil	FWRRVLRVNECIPVFMLDPLTAAEIQALRLKLHLFASQQTDQTVRTHCRAVDTKLAEILKGDDPILRQILANSVEELEEAVRWATRSTIEKATVQFLTGFRR
Ga0207692_106227691	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MLDPLITAEIQTVRLKLVAFTDRQSDRTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALPWAARSTIEKATFHFLTGLRRRGSLSA
Ga0207693_110929121	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MLDPLITAEIQTVRLKLVAFTDRQSDRTVRSQCLAVGARLAEVLEGDDPILRQALADSVEQLEEALRWAARSTIEKATFHFLTGLRHRGSLSAQ
Ga0209624_108993431	3300027895	Forest Soil	MLDPLTTAEIQALRLKLQLFASRQSDATVRSQCLAVDTKLAEVLEGDDPIRRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGVSRLKERGDPWRLNDE
Ga0209006_105517261	3300027908	Forest Soil	MLDPLTTAEIQALRLKLQLFASRQSDATVRSQCLAVDTKLAEALEGDDPILRQVLANSVEQLEEALRWAACSTIEKATMHFLTGLRRRGSLSA
Ga0222749_103130781	3300029636	Soil	AYSGLMLDPLTAAEIQTVRQKLVAFANRHSDQTVRSQCLAVDAKLAEVLKGDDPIRRQGLANSVEQLEEALRWAARSTIEKATFHFLTALRRRGSLSA
Ga0170824_1255178832	3300031231	Forest Soil	MLDPLTAAEIQTVRLKLVAFANRHSDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVEQLEEALRWAARSTIEKATFHFLTGLGRRGSLSA
Ga0310915_104531542	3300031573	Soil	MLDPLIAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARSRIEKATFHFLTGLRRLGSLLA
Ga0307474_103631601	3300031718	Hardwood Forest Soil	MLDPLTAAEIQTVRLKLVAFANRHSDQTVRSQCLAVDAKLAEVLEGDDPIRRQVLANSVQQLEEALRWAARSTIEQATFQFLTGLRRRGSLSA
Ga0306917_110179322	3300031719	Soil	MLDPLTTAEIQTLRLKLQLFASRQTDATVRSQCLAVDTKLAEVLEGDDPILRQILANSVEQLEEALRWATRSTIEKATMQFLTGFRR
Ga0310917_108572302	3300031833	Soil	MLDPLTAAEIQALRLKLQLFASRQTDATVRFQCLAVDTRLAEVLEGDDPVLRQILANSVEQLEEALRWATRSTIEKATMQFLTGFRR
Ga0306919_100577212	3300031879	Soil	MLDPLIAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARSRIEKATFHFLTGLRRLGSLSA
Ga0306925_110367552	3300031890	Soil	MLDPLTAVEIQALRLKLQLFARRQTDATVRSQCHAVDRRLVEVLKGDDPILRQVLANSVEQLEEALRLAARSTIEKATMQFLTGFRR
Ga0306925_110423122	3300031890	Soil	MLDPPTAAEIQALRLKLQLFANRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARSRIEKATFHFLTGLRRLGSLSA
Ga0306923_116977731	3300031910	Soil	MLDPLTAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLADVLEGDDPILRQILANPVEQLEEGLRWAARSRIEKATFHFLTGLRRLGNLSA
Ga0306923_119126222	3300031910	Soil	MLDPLTAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDSILRQILANSVEQLEEALRWATRSTIEKATMQFLTGFRR
Ga0306921_103304782	3300031912	Soil	MLDALSTVEIQALRLKLQLFASWQTDQTVRLQCHAVDTRLAEILEGDDPILRQILANSVEELEEAVRWATRSTIEKATMQFLTGSRR
Ga0310913_105934521	3300031945	Soil	MLDPLTAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARSTIEKATFHFLTGLRRRGSLSA
Ga0310909_109463361	3300031947	Soil	MLDPLTAAEIQSLRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARSRIEKATFHFLTGLRRLGSLSA
Ga0310909_115643442	3300031947	Soil	MLDPLTAAEIQALRLKLQVFASRQTDATVRSQCLDVDTRLAEVLERDDPILRQILADSVEQLEEVLRWAARSTIEKAVMHFLTGIRR
Ga0306926_123526731	3300031954	Soil	MLDPLTAAEIQTVRLKLMAFTDRQSDQTVRSQCLAVDARLAEVLEGGDPILHRVLANSVQQLEEALRWAARSTIEKATFHFLTGLRHRGSLSA
Ga0318533_111339862	3300032059	Soil	MLDPLTAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEVLRWAARSRIEKATFHFLTGLRRLGSLSA
Ga0306924_104469883	3300032076	Soil	MLDPLTAAEIQTVRLKLLAFADRQSDQTVRSQCLAVDAKLAEVLEGDNPILHRVLANSVQQLEEALRWAARSTIEKAAFHFLTGLRHRGSLSAQGARRPCRLNEEAPTAKPPAM
Ga0306924_111709721	3300032076	Soil	MLDPLIAAEIQALRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARSRIEKATFHFLTGLRRLGNLSA
Ga0306924_120151561	3300032076	Soil	MLDPLTAVEIQALRLRLQLFASRQTDATVRSQCHAVDTRLAEVLEEDDPILCQILANSVEQLEEALRRSRIETATLHFLTRLRRWGHSAR
Ga0311301_121546152	3300032160	Peatlands Soil	LSLAARRSRSLMLDPLTAAEIQTVRLKLLAFADRQSDQTVRSQCLAVDAKLAEVLEGDDSILRQGLANSVERLEEALRWATHSTIEKATFHFLTGLRRRGSLSA
Ga0306920_1018156972	3300032261	Soil	MLDPLTAAEIQTVRLKLAAFADRQSDQTVRSQCLAVDARLAEVLEGGDPILHRALANSVQQLEEALRWAARSTIEKATFHFLTGLRHRGSLSA
Ga0306920_1025340942	3300032261	Soil	MLDPLTAAEIQSLRLKLQLFASRQTDATVRSQCLAVDTRLAEVLEGDDPILRQILANSVEQLEEALRWAARSTIEKATMHFLTGLRR
Ga0306920_1038866211	3300032261	Soil	LRLKLQLFARRQTDATVRSQCHAVDRRLVEVLKGDDPILRQVLANSVEQLEEALRRATRSTIEKATMQFLTGFRRRRSLSA

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103931

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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