Metagenome / Metatranscriptome Family F103935

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103935
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	164 residues
Representative Sequence	KWNQSYAWVKLPDVGNITVPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAQYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTSGLDTSTDTQ
Number of Associated Samples	93
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.00 %
% of genes near scaffold ends (potentially truncated)	96.04 %
% of genes from short scaffolds (< 2000 bps)	98.02 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.020 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.852 % of family members)
Environment Ontology (ENVO)	Unclassified (21.782 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.554 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.21% β-sheet: 21.66% Coil/Unstructured: 47.13%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00580	UvrD-helicase	10.89
PF01161	PBP	3.96
PF00296	Bac_luciferase	2.97
PF13561	adh_short_C2	0.99
PF13454	NAD_binding_9	0.99
PF13361	UvrD_C	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	10.89
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	10.89
COG3973	DNA helicase IV	Replication, recombination and repair [L]	10.89
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	3.96
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	2.97

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	98.02 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	97.03 %
Unclassified	root	N/A	1.98 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	97.03 %
Unclassified	root	N/A	1.98 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02QR635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300000443\|F12B_12398144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300004114\|Ga0062593_101789940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	674	Open in IMG/M
3300005340\|Ga0070689_100805924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	826	Open in IMG/M
3300005440\|Ga0070705_100228866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1292	Open in IMG/M
3300005455\|Ga0070663_100881050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300005529\|Ga0070741_10603340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	980	Open in IMG/M
3300005535\|Ga0070684_102020252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300005543\|Ga0070672_100769230	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	846	Open in IMG/M
3300005564\|Ga0070664_101983627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300005615\|Ga0070702_100534322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	867	Open in IMG/M
3300005618\|Ga0068864_100317277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1463	Open in IMG/M
3300005764\|Ga0066903_108068922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	540	Open in IMG/M
3300005841\|Ga0068863_101713497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300005985\|Ga0081539_10309455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300006031\|Ga0066651_10825988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300006034\|Ga0066656_11077577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	516	Open in IMG/M
3300006163\|Ga0070715_10873946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300006173\|Ga0070716_101521864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300006175\|Ga0070712_101608506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300006237\|Ga0097621_102289670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	517	Open in IMG/M
3300006846\|Ga0075430_101472772	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300006853\|Ga0075420_100190779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1791	Open in IMG/M
3300006969\|Ga0075419_10313821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1059	Open in IMG/M
3300009012\|Ga0066710_104438956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300009090\|Ga0099827_11341374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300009098\|Ga0105245_12031806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300009177\|Ga0105248_12928020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	544	Open in IMG/M
3300009792\|Ga0126374_10407311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	953	Open in IMG/M
3300010046\|Ga0126384_11029749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	751	Open in IMG/M
3300010359\|Ga0126376_11673079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	671	Open in IMG/M
3300010360\|Ga0126372_10431648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1214	Open in IMG/M
3300010361\|Ga0126378_12058053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	651	Open in IMG/M
3300010362\|Ga0126377_11735782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	699	Open in IMG/M
3300010362\|Ga0126377_12052693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	648	Open in IMG/M
3300010366\|Ga0126379_11425142	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	799	Open in IMG/M
3300010376\|Ga0126381_100219638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2554	Open in IMG/M
3300010376\|Ga0126381_102315754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	771	Open in IMG/M
3300010397\|Ga0134124_12367754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	572	Open in IMG/M
3300010398\|Ga0126383_10400410	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1409	Open in IMG/M
3300010398\|Ga0126383_10797560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1027	Open in IMG/M
3300010400\|Ga0134122_11286656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	738	Open in IMG/M
3300012212\|Ga0150985_112360926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300012930\|Ga0137407_12341778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	510	Open in IMG/M
3300012957\|Ga0164303_10517529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	768	Open in IMG/M
3300012958\|Ga0164299_11277097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	560	Open in IMG/M
3300012960\|Ga0164301_10742293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	744	Open in IMG/M
3300012961\|Ga0164302_11506442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	555	Open in IMG/M
3300012971\|Ga0126369_11566251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	749	Open in IMG/M
3300012971\|Ga0126369_12607730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	590	Open in IMG/M
3300012985\|Ga0164308_11534387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	613	Open in IMG/M
3300012985\|Ga0164308_11674931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300012986\|Ga0164304_10244376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1199	Open in IMG/M
3300014326\|Ga0157380_11750257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	680	Open in IMG/M
3300014745\|Ga0157377_10691964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300015195\|Ga0167658_1036729	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1262	Open in IMG/M
3300015372\|Ga0132256_100497231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1330	Open in IMG/M
3300015372\|Ga0132256_100984685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	959	Open in IMG/M
3300016357\|Ga0182032_12067644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300016371\|Ga0182034_10449085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1067	Open in IMG/M
3300016387\|Ga0182040_11297859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300016422\|Ga0182039_10954687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	767	Open in IMG/M
3300016422\|Ga0182039_12086694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300017792\|Ga0163161_11936408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300017947\|Ga0187785_10304737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	734	Open in IMG/M
3300017961\|Ga0187778_11283797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300018071\|Ga0184618_10140509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	980	Open in IMG/M
3300018429\|Ga0190272_12051612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300018476\|Ga0190274_11823137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	703	Open in IMG/M
3300021432\|Ga0210384_10747108	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	874	Open in IMG/M
3300025915\|Ga0207693_10933548	Not Available	665	Open in IMG/M
3300025918\|Ga0207662_11028107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300025936\|Ga0207670_10620282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	889	Open in IMG/M
3300025941\|Ga0207711_11649872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300026088\|Ga0207641_11659299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300026089\|Ga0207648_12178236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	515	Open in IMG/M
3300026095\|Ga0207676_12099344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300027874\|Ga0209465_10135197	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1220	Open in IMG/M
3300027880\|Ga0209481_10607487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	567	Open in IMG/M
3300027907\|Ga0207428_10979218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	595	Open in IMG/M
3300028592\|Ga0247822_11549050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	561	Open in IMG/M
3300028809\|Ga0247824_10266722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	954	Open in IMG/M
3300031093\|Ga0308197_10490279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300031543\|Ga0318516_10832994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300031562\|Ga0310886_10560824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	697	Open in IMG/M
3300031573\|Ga0310915_10495604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	868	Open in IMG/M
3300031744\|Ga0306918_10249993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1353	Open in IMG/M
3300031747\|Ga0318502_10268757	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	998	Open in IMG/M
3300031748\|Ga0318492_10217722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	981	Open in IMG/M
3300031779\|Ga0318566_10634721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	519	Open in IMG/M
3300031781\|Ga0318547_10719171	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	621	Open in IMG/M
3300031792\|Ga0318529_10296366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	753	Open in IMG/M
3300031798\|Ga0318523_10588557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	548	Open in IMG/M
3300031833\|Ga0310917_10269183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1149	Open in IMG/M
3300031947\|Ga0310909_10349392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1241	Open in IMG/M
3300031959\|Ga0318530_10275695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	694	Open in IMG/M
3300032025\|Ga0318507_10337909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300032059\|Ga0318533_11094162	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300032261\|Ga0306920_101669980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300033290\|Ga0318519_10628263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.24%
Host-Associated	Host-Associated	23.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.25%
Plants	Host-Associated → Plants	23.76%
Aquatic	Environmental → Aquatic	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.25%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.92%
Sediment	Environmental → Aquatic → Sediment	0.99%
Roots	Host-Associated → Plants → Roots	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.40%
Loam	Environmental → Terrestrial → Soil → Loam	12.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.93%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.95%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.77%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.90%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.95%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.97%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.97%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.98%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.99%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.99%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.99%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	7.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.95%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.98%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.98%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.98%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.99%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.99%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.99%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.99%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300000443	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.2B clc assemly	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_02219850	2070309004	Green-Waste Compost	MPAGAVYRYRATAAVRPTDCPSCRWDPFVERKWNQSYAWVKLPEVGNITVPDAYYDRFYTYAGAAPPNYPQACHVLEDAAATKEESELARVPMPGDAQYRYEAVSAPTQQCKSCTLEPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFYGYASAEPPNYAAACKVLVEA
F12B_123981441	3300000443	Soil	PIYDDCAYILSYAALEEEEVVRISMPASAVYRYQARTAVTPADCPSCRWDRFVERKWHQSYAWVKLPDIGNITVPNAYYERFYTYAGATPPNYPQACRVLEEAAAAGEERDLVRVAMPGDAEYRYEGGSAPTQECKSCTLQPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFYGYAS
Ga0062593_1017899401	3300004114	Soil	ATAKYRYTAKAAPKPSDCPDCQWQSFVERRWNQSFAWVKLPEVGNVTVPDAYYDRFYGYAGASPPNYPQACRVLQDAAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVMTTALDTSRGEDQ*
Ga0070689_1008059242	3300005340	Switchgrass Rhizosphere	TARYRYTAKAAPKPSDCPDCQWQSFVERKWNQSFAWVKLPEVGNVTVPDAYYDRFYGYAGASPPNYPQACRVLQDAAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTSRGGDDQ*
Ga0070705_1002288661	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	LPDVGNVTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDVQ*
Ga0070663_1008810502	3300005455	Corn Rhizosphere	TAKAAPKPSDCPDCQWQSFVERKWNQSFAWVKLPEVGNITVPDAYYDRFYGYAGASPPNYPQACKVLQDAAAVTDERDAPRMSMPSDASYRYEAEAVPTQECKSCTLQPFVDRKWNKEYVWVQVPQTGNVTVPEDAYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTSRGGDDQ*
Ga0070741_106033401	3300005529	Surface Soil	ALEEEEVVRISMPAQATYRYRASAPAKQECPACRWDRFVERRWNQSYSWVKLPDIGNVTVPDTYYDRFFKFAGANPPNYPQACQVLQEAAAGEAGEVERVSMPSGAGYRFEAEAAPAQECKSCTFEPFVDRKWNREFVWVEIPQTGNVTVPEDSYDSFYRYASADPPDYKAACKVLVEAAAADTVQTTALDNRRGLE*
Ga0070684_1020202521	3300005535	Corn Rhizosphere	WNQSFAWVKLPEVGNVTVPDAYYDRFYGYAGASPPNYPQACRVLQDAAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDAYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTRRGGDDQ*
Ga0070672_1007692302	3300005543	Miscanthus Rhizosphere	QSFAWVKLPDVGNVTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDVQ*
Ga0070664_1019836271	3300005564	Corn Rhizosphere	NVTVPDAYYDRFYGYAGASPPNYPQACRVLQDAAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTSRGGDDQ*
Ga0070702_1005343222	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	TAKYRYTAKAAPKPSDCPDCQWQSFVERRWNQSFAWVKLPEVGNVTVPDAYYDRFYGYAGASPPNYPQACRVLQDAAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTSRGGDDQ*
Ga0068864_1003172772	3300005618	Switchgrass Rhizosphere	LEEEEVVRVSMPATAKYRYTAKAAPKPSDCPDCQWQSFVERRWNQSFAWVKLPEVGNVTVPDAYYDRFYGYAGASPPNYPQACRVLQDAAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTSRGGDDQ*
Ga0066903_1080689221	3300005764	Tropical Forest Soil	FYTYAAATPPNYPQACRVLEDAAAAGQERELVRVTMPGDAEYRFEANSVPTQECKSCTLQPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSTDTQ*
Ga0068863_1017134971	3300005841	Switchgrass Rhizosphere	WDRFVERKWNQSFAWVKLPDVGNVTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDVQ*
Ga0081539_103094551	3300005985	Tabebuia Heterophylla Rhizosphere	SMPPSARYRYTARVPVKDDCPSCRWQRFVERRWNQSYGWVKIPDVGNVTVPDAYYERFYTFAGANPANYPQACRVLEEAASAKEESAVARVRMPDGTEYRYRADTAPTQECKSCTLEPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFYNYAGAEPPNYPAACKVLVEAAAADTVMTTALDTRRELE*
Ga0066651_108259881	3300006031	Soil	YDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDVQ*
Ga0066656_110775771	3300006034	Soil	ATTYRYQAKAAVAPADCPACRWDRFVERKWNQSFAWVKLPDVGNVTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAAD
Ga0070715_108739461	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	YYERFYTYAAAAPPNYPQACRVLEDAASAGEEREPARVTMPGDAEYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSTDTQ*
Ga0070716_1015218641	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFTGKMGTEPPNYSEACKVLVEAAAADSVVAMASPDLNRRL*
Ga0070712_1016085061	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VSMPAATTYRYQAKAAVAPADCPACRWDRFVERKWNQSFAWVKLPDVGNVTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDV
Ga0097621_1022896701	3300006237	Miscanthus Rhizosphere	QSYAWVKLPEVGNVSVPDAYYDRFYTYAGASPPNYPQACKVLEEAAATKEESELVRIGMPSDAGYRYEADVVPTQECKSCTLEPFVERKWNREFVWVQVPQTGNVTVPEDTYDRFYGYASAEPPNYPAACKVLVEAAAADTVMTTALDTRREP*
Ga0075430_1014727721	3300006846	Populus Rhizosphere	PAGAAYKYRAKAPIAAKPQDCPSCRWDRFVERKWNQSFSWVKIPEIGNVTVPDGHYDRFYGFAGANPPNYPQACQVLQEAASTKEEGEVVHMSMPAGTDYRFEAGGAPTSACKSCTMEPFVDRKWNREFVWVQVPEAGNVTVPEDYYDRFYSYASAEPPNYGAACRVLVEAAAADTVMTTALDNRR
Ga0075420_1001907792	3300006853	Populus Rhizosphere	NVTVPDGHYDRFYGFAGANPPNYPQACQVLQEAASTKEEGEVVHMSMPAGTDYRFEAGGAPTSACKSCTMEPFVDRKWNREFVWVQVPEAGNVTVPEDYYDRFYSYASAEPPNYGAACRVLVEAAAADTVMTTALDNRRGLEQ*
Ga0075419_103138211	3300006969	Populus Rhizosphere	KYRAKAPIAAKPQDCPSCRWDRFVERKWNQSFSWVKIPEIGNVTVPDGHYDRFYGFAGANPPNYPQACQVLQEAASTKEEGEVVHMSMPAGTDYRFEAGGAPTSACKSCTMEPFVDRKWNREFVWVQVPEAGNVTVPEDYYDRFYSYASAEPPNYGAACRVLVEAAAADTVMTTALDNRRGLEQ*
Ga0066710_1044389561	3300009012	Grasslands Soil	EDEYVRVSMPSATAYREQAKAAVAPADCPACRWDRFVERKWNQSFAWVKLPDIGNVTVPDAYYDRFYSYAGASPPNYPQACKVLEDAAATKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKV
Ga0099827_113413741	3300009090	Vadose Zone Soil	RYTAKAEVKSDCPSCRWDRFVERKWNQSYAWVKLPQVGNITVPEAYYDRFYTYAGANPPNYPQACQVLQDAAAVSGEREAVRVSMPSGTDYRYEAEVAPTQECKSCTLEPFVERKWNREYVWVQVPQTGNVTVPEDTYDRFYGYASAEPPNYPAACKVLVEAAAADTVMTTALDTRREE*
Ga0105245_120318061	3300009098	Miscanthus Rhizosphere	SFVERRWNQSFAWVKLPEVGNVTVPDAYYDRFYGYAGASPPNYPQACRVLQDAAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYHRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTSRGGDDQ*
Ga0105248_129280201	3300009177	Switchgrass Rhizosphere	RKWNQSFAWVKLPDVGNVTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDVQ*
Ga0126374_104073112	3300009792	Tropical Forest Soil	PSCRWDRFVERKWNQSYAWVKLPDVGNITVPDAYYERFYTYAAATPPNYPQACRVLEEAAAAGEERELARVTMPGDAEYRYEASSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSIDTQ*
Ga0126384_110297491	3300010046	Tropical Forest Soil	ADCPSCRWDRFVERKWNQSYAWVKLPELGNVTVPDAYYERFYTYAGATPPNYPQACQVLEEAAAAGEEREIARVTMPGDAEYRYEANSAPTQDCKSCTLQPFVERKWNREFVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTTGPDTNTDTQ*
Ga0126376_116730791	3300010359	Tropical Forest Soil	AYYERFYTYAAATPPNYPQACRVLEEAVAAGEEGESTRVTMPGDTEYRYEASSAPTQECKSCTLQPFVERKWNREFVWVQIPQTGNVTVPEDYYERFYGYASADPPNYAAACKVLVEAAAADTVMTTGLDTSTDTQ*
Ga0126372_104316481	3300010360	Tropical Forest Soil	ILSYAALEEEEVVRVSMPASAAYRYQARAPVAPADCPSCRWDRFVERKWNQSYAWVKLPDVGNITVPDDYYERFYTYAAATPPNYPQACRVLEDAAAAGEERELARVTMPGDAEYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSTDTQ*
Ga0126378_120580531	3300010361	Tropical Forest Soil	RFVERKWNQSYAWVKLPDVGNVTVPDAYYERFYTYAAATPPNYPQACRVLEEAAAAGEERESTHVTMPGDTEYRYEASSAPTQECKSCTLQPFVERKWNREFVWVQIPQTGNVTVPEDYYERFYGYASADPPNYAAACKVLVEAAAADTVMTTGLDTSTDTQ*
Ga0126377_117357821	3300010362	Tropical Forest Soil	NITVPDAYYERFYTYAAATPPNYPQACRVLEEAAAAGEERELARVTMPGDAEYRYEASSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTTGPDTNTDTQ*
Ga0126377_120526931	3300010362	Tropical Forest Soil	VKLPEVGNITVPDAYYDRFYTYAGATPPNYPQACHVLEDAAATKEESELARGPMPGDAQYRYEAVSAPTQQCKSCTLEPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSTDQQ*
Ga0126379_114251421	3300010366	Tropical Forest Soil	WILSYAALEEEEVVRVPMPAGAVYRYRATAAVRPTDCPSCRWDPFVERKWNQSYAWVKLPDVGNITVPDAYYERFYTYAAATPPNYPQACRVLEEAAAAGEERESARVTMPGDTEYRYEANSAPTQECKSCTLQPFVERKWNREFVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLTEAAAADTVMTTGLDTSTDTQ*
Ga0126381_1002196381	3300010376	Tropical Forest Soil	VRISMPVGASYRYRAAAPLAPADCPSCRWDRFVERTWNQSYAWVKLPDVGNVTVPDAYYERFYTYAAATPPNYPQACRVLEEAAAAGEERESTHVTMPGDTEYRYEASSAPTQECKSCTLQPFVERKWNREFVWVQIPQTGNVTVPEDYYERFYGYASADPPNYAAACKVLVEAAAADTVMTTGLDTSTDTQ*
Ga0126381_1023157543	3300010376	Tropical Forest Soil	PDAYYERFYTYAAATPPNYPQACRVLEDAAAAGEERELARVTMPGDAEYRYEANSAPTQDCKSCTLQPFVERKWNREFVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSSDTQ*
Ga0134124_123677541	3300010397	Terrestrial Soil	YGYAGANPPNYPQACKVLQDVAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTSRGGDDQ*
Ga0126383_104004101	3300010398	Tropical Forest Soil	PPNYPQACHVLEDAAATKEESELARGPMPGDAQYRYEAVSAPTQQCKSCTLEPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSTDQQ*
Ga0126383_107975602	3300010398	Tropical Forest Soil	YAALEEEEVVRVSMPAGAPYRYRAKAPSTPTDCPSCRWDRFVERKWNQSYAWVKLPDVGNITVPDAYYERFYTYAAATPPNYPQACRVLEDAAAAGEERELARVTMPGDAEYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSTDTQ*
Ga0134122_112866562	3300010400	Terrestrial Soil	CQWQSFVERRWNQSFAWVKLPEVGNVTVPDAYYDRFYGYAGASPPNYPQACRVLQDAAAVTDEKNAGRMSMPSDASYRHGAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDTYDRFYGYASAEPPNYPAACKVLVEAAAADTVMTTALDTRREE*
Ga0150985_1123609261	3300012212	Avena Fatua Rhizosphere	PVSPADCPACRWDRFVERKWNQSFAWVKLPDIGNVTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDVQ*
Ga0137407_123417781	3300012930	Vadose Zone Soil	QSYAWVKLPEVGNITVPDAYYDRFYTYAGANPPNYPQACKVLEDAAAVTDEKEAARISMPSDTEFRYEAANAPTQECKSCTLAPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASAETPNYPAACKVLVEAAAVDTVMTTSLDTSREEQ*
Ga0164303_105175291	3300012957	Soil	SPPNYPQACKVLQDAAAVTDERDGARMSMPSDASYRYEAEAVPTQECKSCTLQPFVDRKWNKEYVWVQVPQTGNVTVPEDAYDRFYGYASADPPNSPAACKVLVEAAAEDTVMITALDTRRGGDDQ*
Ga0164299_112770971	3300012958	Soil	RFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDVQ*
Ga0164301_107422931	3300012960	Soil	GVEFLTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDVQ*
Ga0164302_115064421	3300012961	Soil	NITVPDAYYDPFYGYAGASPPNYPQACKVLQDAAAVPDERDGARMSMPSDASYRYEAEAVPTQECKSCTLQPVVDRKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTRRGGDDQ*
Ga0126369_115662511	3300012971	Tropical Forest Soil	DCPSCRWDRFVERKWNQSYAWVKLPDVGNITVPDAYYERFYTYAAATPPNYPQACRVLEEAAAAGEERESARVTMPGDTEYRYEANSAPTQECKSCTLQPFVERKWNREFVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLTEAAAADTVMTTGLDTSTDTQ*
Ga0126369_126077301	3300012971	Tropical Forest Soil	FVERKWNQSYAWVKLPDIGNITVPDAYYERFYTYAGATPPNYPQACRVLEEAAAAGEERESTHVTMPGDTEYRYEASSAPTQECKSCTLQPFVERKWNREFVWVQIPQTGNVTVPEDYYERFYGYASADPPNYAAACKVLVEAAAADTVMTTGLDTSTDTQ*
Ga0164308_115343871	3300012985	Soil	YRYQAKAAVAPADCPACRWDRFVERKWNQSFAWVKLPDVGNVTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDVQ*
Ga0164308_116749311	3300012985	Soil	VWDDCSYILSYAALEEEDVVRVSMPATARYRYTAKAAPKPSDCPDCQWQSFVERKWNQSFAWVKLPEVGNITVPDAYYDRFYGYAGASPPNYPQACKVLQDAAAVTDERDAPRMSMPSDASYRYEAEAVPTQECKSCTLQPFVDRKWNKEYVWVKVPQTGNVTVPEDAYDRFYGYASADPPNYPAACKVLVEAAA
Ga0164304_102443762	3300012986	Soil	QSFAWVKLPQVGNITVPDAYYDRFYTYAGANPPNYPQACQVLTDAAAVTDERDAPRMSMPSDASYRYEAEAAPTQECKSCTLQPFVDRKWNKEYVWVQVPQTGNVTVPEDAYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTRRGGDDQ*
Ga0157380_117502571	3300014326	Switchgrass Rhizosphere	SMPAGAAYKYRAKAPIAAKPQDCPSCRWDRFVERKWNQSFSWVKIPEIGNVTVPDGHYDRFYGFAGANPPNYPQACQVLQEAASTKEEGEVVRMSMPAGTDYRFEAGGAPTSACKSCTMEPFVDRKWNREFVWVQVPEAGNVTVPEDYYDRFYSYASAEPPNYGAACRVLVEAAAADTVMTTALDNRRGLEQ*
Ga0157377_106919642	3300014745	Miscanthus Rhizosphere	VVRVSMPASAKYRYTAKAAPKPSDCPDCQWQSYVERKWNQSFAWVKLPEVGNVTVPDAYYDRFYGYAGASPPNYPQACRVLQDAAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTSRGGDDQ*
Ga0167658_10367292	3300015195	Glacier Forefield Soil	VERKWNQSFAWVKLPEVGNITVPDAYYDRFYTYAGAAPPNYPQACQVLTDAAAVTDEKDGGRVSMPPGTDYRYEAAVAPTQECKSCTLEPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYSYASAEPPNYPAACKVLVEAAAADTVMTTALDTRREE*
Ga0132256_1004972312	3300015372	Arabidopsis Rhizosphere	DCQWQSFVERRCNQSFAWVKLPEVGNVTVPDAYYDRFYGYAGASPPNYPQACRVLQDAAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTSRGGDDQ*
Ga0132256_1009846852	3300015372	Arabidopsis Rhizosphere	FVERKWNQSYAWVKLPDVGNVTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDVQ*
Ga0182032_120676441	3300016357	Soil	EVVRVSMPASAAYRYRATAPVTPPDCPSCRWDRFVERKWNQSYAWVKLPDVGNITVPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAQYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNY
Ga0182034_104490852	3300016371	Soil	YAALEEEEVVRVSMPANAAYRYQAKAPVAPADCPSCRWDRFVERKWNQSYAWVKLPDVGNITVPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAEYRYEANSAPTPECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTSGLDTSTDTQ
Ga0182034_110340581	3300016371	Soil	PPNYPQACHVLEDAAATKEESELARGPMPGDAQYRYEAVSAPTQQCKSCTLEPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSTDQQ
Ga0182040_112978591	3300016387	Soil	RKWNQSYAWVKLPDVGNITVPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEERAVARVTMPGDAQYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTSGLDTSTDTQ
Ga0182039_109546871	3300016422	Soil	KLPEVGNITVPDAYYDRFYTYAGATPPNYPQACHVLEDAAATKEESELARGPMPGDAQYRYEAVSAPTQECKSCTLEPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSTDQQ
Ga0182039_120866941	3300016422	Soil	ITVPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAEYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYSAACKVLVEAAAADTVMTTGLDTSTDTQ
Ga0163161_119364081	3300017792	Switchgrass Rhizosphere	EVGNVTVPDAYYDRFYGYAGANPPNYPQACQVLRDAAAVTDEKDAARISMPSDASYRYEADTAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVMTTALDTSRGDDQ
Ga0187785_103047372	3300017947	Tropical Peatland	AKAAPKPSDCPDCQWQSFVERRWNQSFAWVKLPEVGNVTVPDAYYDRFYGYAGASPPNYPQACRVLQDAAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTSRGGDDQ
Ga0187778_112837971	3300017961	Tropical Peatland	LPEVGNITVPDAYYDRFYGYAGANPPNYPQACKVLQDAAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTSRGGDDQ
Ga0184618_101405091	3300018071	Groundwater Sediment	KWNQSFAWVKLPQVGNITVPDAYYDRFYTYAGANPPNYPQACQVLTDAAAVTDEREAVRVSMPAGTDYRYEAGTAPTQECKSCTLEPFVERKWNRDFVWVQVPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVLTTALDTRREE
Ga0190272_120516121	3300018429	Soil	VVRVSMPASAKYRYTAKSEPKPADCPSCRWDRFVERKWNQSYSWVKLPQIGNITVPEAYYDRFYTYAGASPPNYPQACQVLQDASAVTDEREVSRVSMPSDAGYRYEADTAPTQECKSCTLEPFVERKWNKEYVWVQVPQTGNVTVPEDAYDRFYGYASAEPPNYPAACKVLVEAAAADTVMTTALDTRRGLE
Ga0190274_118231372	3300018476	Soil	GNITVPDAYYDRFYTYAGASPPNYPQACQVLTDAAAVTDERDAGRVSMPAGTDFRYEAPAAPTQECKSCTLEPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVMTTALDTSRGEDQ
Ga0210384_107471082	3300021432	Soil	PVTPADCPSCRWDRFVERKWNQSYAWVKLPDVGNITVPDDYYERFYTYAAAAPPNYPQACRVLEDAASAGEEREPARVTMPGDAEYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSTDTQ
Ga0207693_109335481	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VRVSMPAATTYRYQAKAAVAPADCPACRWDRFVERKWNQSFAWVKLPDVGNVTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDVQ
Ga0207662_110281072	3300025918	Switchgrass Rhizosphere	PPNYPQACQVLQDAAAVTDEKGAVRISMPSDASYRYEADTAPAQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTSRGGDDQ
Ga0207670_106202821	3300025936	Switchgrass Rhizosphere	NQSFAWVKLPEVGNVTVPDAYYDRFYGYAGASPPNYPQACRVLQDAAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASADPPNYPAACKVLVEAAAEDTVMTTALDTSRGGDDQ
Ga0207711_116498721	3300025941	Switchgrass Rhizosphere	AVAPADCPACRWDRFVERKWNQSFAWVKLPDVGNVTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDVQ
Ga0207641_116592991	3300026088	Switchgrass Rhizosphere	RWDRFVERKWNQSFAWVKLPDVGNVTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAADTVITTALDTRRDVQ
Ga0207648_121782361	3300026089	Miscanthus Rhizosphere	RKWNQSFAWVKLPDVGNVTVPDAYYDRFYSYAGANPPNYPQACKVLEDAAAAKEESELVRVSMPSNTDYRYEAEVVPTQECKSCALEPFVERKWNREFVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAADRGLQVEWETALETYRLDKGTAIATVRHA
Ga0207676_120993441	3300026095	Switchgrass Rhizosphere	LEEEEVVRVSMPATAKYRYTAKAAPKPSDCPDCQWQSFVERRWNQSFAWVKLPEVGNVTVPDAYYDRFYGYAGASPPNYPQACRVLQDAAAVTDEKNAGRMSMPSDASYRYEAEAAPTQECKSCTLQPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASADPPNYPAACKVLVEAAAEDTVM
Ga0209465_101351971	3300027874	Tropical Forest Soil	CAYILSYAALEEEEVVRVSMPVGVSYRYRAAAPLAPADCPSCRWDRFVERKWNQSYAWVKLPDVGNVTVPDAYYERFYTYAAATPPNYPQACRVLEEAAAAGEERESTRVTMPGDTEYRYEASSAPTQECKSCTLQPFVERKWNREFVWVQIPQTGNVTVPEDYYERFYGYASADPPNYAAACKVLTEAAAADTVMTTGLDTSTDTQ
Ga0209481_106074871	3300027880	Populus Rhizosphere	APIAAKPQDCPSCRWDRFVERKWNQSFSWVKIPEIGNVTVPDGHYDRFYGFAGANPPNYPQACQVLQEAASTKEEGEVVHMSMPAGTDYRFEAGGAPTSACKSCTMEPFVDRKWNREFVWVQVPEAGNVTVPEDYYDRFYSYASAEPPNYGAACRVLVEAAAADTVMTTALDNRRGLEQ
Ga0207428_109792182	3300027907	Populus Rhizosphere	TVPDGHYDRFYGFAGANPPNYPQACQVLQEAASTKEEGEVVHMSMPAGTDYRFEAGGAPTSACKSCTMEPFVDRKWNREFVWVQVPEAGNVTVPEDYYDRFYSYASAEPPNYGAACRVLVEAAAADTVMTTALDNRRGLEQ
Ga0247822_115490501	3300028592	Soil	WNQSFSWVKIPEIGNVTVPDGHYDRFYGFAGANPPNYPQACQVLQEAASTKEEGEVVRMSMPAGTDYRFEAGGAPTSACKSCTMEPFVDRKWNREFVWVQVPEAGNVTVPEDYYDRFYSYASAEPPNYGAACRVLVEAAAADTVMTTALDNRRGLEQ
Ga0247824_102667222	3300028809	Soil	TVPDGHYDRFYGFAGANPPNYPQACQVLQEAASTKEEGEVVRMSMPAGTDYRFEAGGAPTSACKSCTMEPFVDRKWNREFVWVQVPEAGNVTVPEDYYDRFYSYASAEPPNYGAACRVLVEAAAADTVMTTALDNRRGLEQ
Ga0308197_104902791	3300031093	Soil	SDCPSCQWDRFVERKWNQSYAWVKLPEVGNITVPDAYYDRFYTYAGANPPNYPQACKVLENAAAVTEEKEVARISMPSDTEFRYEAANKPTQECKSCTLEPFVERKWNKEYVWVQVPQTGNVTVPEDSYDRFYGYASAEPPNYPAACKVLVEAAAVDTVMTTSLDT
Ga0318516_108329941	3300031543	Soil	SYAWVKLPDVGNITVPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAQYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTSGLDTSTDTQ
Ga0310886_105608242	3300031562	Soil	SFSWVKIPEIGNVTVPDGHYDRFYGFAGANPPNYPQACQVLQEAASTKEEGEVVRMSMPAGTDYRFEAGGAPTSACKSCTMEPFVDRKWNREFVWVQVPEAGNVTVPEDYYDRFYSYASAEPPNYGAACRVLVEAAAADTVMTTALDNRRGLEQ
Ga0310915_104956041	3300031573	Soil	KWNQSYAWVKLPDVGNITVPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAQYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTSGLDTSTDTQ
Ga0306918_102499931	3300031744	Soil	VTPADCPSCRWDRFVERKWNQSYAWVKLPDVGNITVPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAEYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTSGLDTSTDTQ
Ga0318502_102687572	3300031747	Soil	PTDCPSCRWDPFVERKWNQSYAWVKLPEVGNITVPDAYYDRFYTYAGATPPNYPQACHVLEDAAATKEESELARGPMPGDAQYRYEAVSAPTQQCKSCTLEPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSTDQQ
Ga0318492_102177221	3300031748	Soil	AYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAEYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTSGLDTSTDTQ
Ga0318566_106347211	3300031779	Soil	AYYDRFYTYAGATPPNYPQACHVLEDAAATKEESELARGPMPGDAQYRYEAVSAPTQQCKSCTLEPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSTDQQ
Ga0318547_107191711	3300031781	Soil	SYAALEEEEVVRVPMPAGAVYRYRATAAVRPTDCPSCRWDPFVERKWNQSYAWVKLPEVGNITVPDAYYDRFYTYAGATPPNYPQACHVLEDAAATKEESELARGPMPGDAQYRYEAVSAPTQQCKSCTLEPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSTDQQ
Ga0318529_102963661	3300031792	Soil	KWNQSYAWVKLPDVGNITVPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAQYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYAGADPPNYAAACKVLVEAAAADTVMTSGLDTSTDTQ
Ga0318523_105885571	3300031798	Soil	PASAAYRYRATAPVTPADCPSCRWDRFVERKWNQSYAWVKLPEVGNITVPDAYYDRFYTYAGATPPNYPQACHVLEDAAATKEESELARGPMPGDAQYRYEAVSAPTQQCKSCTLEPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDT
Ga0310917_102691831	3300031833	Soil	ASAAYRYRATAPVTPPDCPSCRWDRFVERKWNQSYAWVKLPDVGNITVPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAQYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTSGLDTSTDTQ
Ga0310909_103493921	3300031947	Soil	YRATAPVTPPDCPSCRWDRFVERKWNQSYAWVKLPDVGNITVPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAQYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYAAACKVLVEAAAADTVMTSGLDTSTDTQ
Ga0318530_102756952	3300031959	Soil	VPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAQYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYSAACKVLVEAAAADTVMTSGLDTSTDTQ
Ga0318507_103379091	3300032025	Soil	SCRWDRFVERKWNQSYAWVKLPDVGNITVPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAQYRYEANSAPTQECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYSAACKVLVEAAAADTVMTSGLDTSTDTQ
Ga0318533_110941621	3300032059	Soil	EEEVVRISMPANAAYRYQAKAPVAPADCPSCRWDRFVERKWNQSYAWVKLPDVGNITVPDAYYERFYTYAAAAPPNYPQACRVLEDAAAAGEEREVARVTMPGDAEYRYEANSAPTPECKSCTLQPFVERKWNREYVWVQIPQTGNVTVPEDYYERFYGYASAEPPNYSAACKVLVEAAAADTVMTTGLDTGTD
Ga0306920_1016699801	3300032261	Soil	AYYERFYSYAGATPPNYPQACHTLEEAAAAKEESEVTRVTMPGDAVYRYEAAAAPSQECTSCSLQPFVERKWNREYVWVQIPQTGNVTVPEDSYDRFYGYASAEPPNYAAACKVLVDAAASDTVMTTGLDTGTGER
Ga0318519_106282631	3300033290	Soil	ITVPDAYYDRFYTYAGATPPNYPQACHVLEDAAATKEESELARGPMPGDAQYRYEAVSAPTQQCKSCTLEPFVERKWNREFVWVQIPQTGNVTVPEDYYDRFYGYASAEPPNYAAACKVLVEAAAADTVMTTGLDTSTDQQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103935

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences