Metagenome / Metatranscriptome Family F103953

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103953
Family Type	Metagenome / Metatranscriptome
Number of Sequences	101
Average Sequence Length	90 residues
Representative Sequence	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDASFVLTVKNANRHGRAYKQAGTATI
Number of Associated Samples	94
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.01 %
% of genes from short scaffolds (< 2000 bps)	94.06 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (63.366 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.822 % of family members)
Environment Ontology (ENVO)	Unclassified (32.673 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.584 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 22.12% β-sheet: 20.35% Coil/Unstructured: 57.52%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF00542	Ribosomal_L12	37.62
PF16320	Ribosomal_L12_N	26.73
PF00466	Ribosomal_L10	4.95
PF13424	TPR_12	1.98
PF13374	TPR_10	0.99
PF07883	Cupin_2	0.99
PF00486	Trans_reg_C	0.99
PF03946	Ribosomal_L11_N	0.99
PF00687	Ribosomal_L1	0.99
PF05437	AzlD	0.99
PF02518	HATPase_c	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0222	Ribosomal protein L7/L12	Translation, ribosomal structure and biogenesis [J]	37.62
COG0244	Ribosomal protein L10	Translation, ribosomal structure and biogenesis [J]	4.95
COG0080	Ribosomal protein L11	Translation, ribosomal structure and biogenesis [J]	0.99
COG0081	Ribosomal protein L1	Translation, ribosomal structure and biogenesis [J]	0.99

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.34 %
Unclassified	root	N/A	33.66 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.34 %
Unclassified	root	N/A	33.66 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	63.37 %
Unclassified	root	N/A	33.66 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	2.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	18.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	17.82 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	2.97 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	18.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	10.89 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	2.97 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.99 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.95 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	2.97 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.98 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.99 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.99 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.99 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	15.84 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	2.97 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.98 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.99 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.99 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.99 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.99 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.84 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	2.97 %
Nitratireductor	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor	1.98 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.99 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.99 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.99 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.99 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.84 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	2.97 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	1.98 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.99 %
Sphingomonas melonis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas melonis	0.99 %
Rikenellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae	0.99 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.99 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.84 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	2.97 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	1.98 %
Sphingomonas melonis TY	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas melonis → Sphingomonas melonis TY	0.99 %
Rikenella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Rikenella	0.99 %
Geobacter metallireducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter metallireducens	0.99 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.99 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.99 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.66 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	15.84 %
Symbiodinium microadriaticum	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	2.97 %
Nitratireductor pacificus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	1.98 %
Rikenella microfusus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Rikenella → Rikenella microfusus	0.99 %
Sphingomonas melonis TY	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas melonis → Sphingomonas melonis TY	0.99 %
Geobacter metallireducens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter metallireducens	0.99 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.99 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_10545061	Not Available	630	Open in IMG/M
3300001431\|F14TB_106829572	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → Geobacter metallireducens	511	Open in IMG/M
3300002568\|C688J35102_120297736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	975	Open in IMG/M
3300003321\|soilH1_10100936	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300003572\|Ga0007424J51698_1108440	Not Available	658	Open in IMG/M
3300003990\|Ga0055455_10008664	All Organisms → cellular organisms → Bacteria	2195	Open in IMG/M
3300004643\|Ga0062591_100751127	Not Available	891	Open in IMG/M
3300005165\|Ga0066869_10112085	All Organisms → cellular organisms → Bacteria → Proteobacteria	557	Open in IMG/M
3300005330\|Ga0070690_100124323	All Organisms → cellular organisms → Bacteria	1735	Open in IMG/M
3300005330\|Ga0070690_101188962	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300005355\|Ga0070671_100945416	Not Available	754	Open in IMG/M
3300005367\|Ga0070667_100671116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	958	Open in IMG/M
3300005434\|Ga0070709_10331545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1120	Open in IMG/M
3300005434\|Ga0070709_11669160	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300005435\|Ga0070714_100761393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	936	Open in IMG/M
3300005439\|Ga0070711_101086157	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300005466\|Ga0070685_10496658	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	863	Open in IMG/M
3300005539\|Ga0068853_101427404	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300005549\|Ga0070704_100565850	Not Available	995	Open in IMG/M
3300005563\|Ga0068855_102441278	Not Available	521	Open in IMG/M
3300005614\|Ga0068856_102193422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	561	Open in IMG/M
3300006046\|Ga0066652_101640508	Not Available	589	Open in IMG/M
3300006163\|Ga0070715_10514604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	687	Open in IMG/M
3300006605\|Ga0074057_11026022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Nitratireductor → Nitratireductor pacificus	512	Open in IMG/M
3300006755\|Ga0079222_11764210	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300006804\|Ga0079221_11527623	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300006854\|Ga0075425_100052756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4552	Open in IMG/M
3300006914\|Ga0075436_100370724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300009092\|Ga0105250_10288520	Not Available	707	Open in IMG/M
3300009093\|Ga0105240_10752479	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300009174\|Ga0105241_12242155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300010038\|Ga0126315_10189745	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	1234	Open in IMG/M
3300010303\|Ga0134082_10539371	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300010359\|Ga0126376_12427064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300010371\|Ga0134125_10727825	Not Available	1093	Open in IMG/M
3300010400\|Ga0134122_12891818	Not Available	534	Open in IMG/M
3300012201\|Ga0137365_11347376	Not Available	504	Open in IMG/M
3300012469\|Ga0150984_112754011	Not Available	715	Open in IMG/M
3300012898\|Ga0157293_10013217	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300012915\|Ga0157302_10042987	All Organisms → cellular organisms → Bacteria → Proteobacteria	1247	Open in IMG/M
3300012915\|Ga0157302_10451633	Not Available	543	Open in IMG/M
3300012957\|Ga0164303_10209476	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300012957\|Ga0164303_11311312	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300012984\|Ga0164309_11086912	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → Sphingomonas melonis → Sphingomonas melonis TY	664	Open in IMG/M
3300012985\|Ga0164308_10448757	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300013102\|Ga0157371_10137479	Not Available	1740	Open in IMG/M
3300013296\|Ga0157374_12257455	Not Available	571	Open in IMG/M
3300014157\|Ga0134078_10183756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	843	Open in IMG/M
3300017792\|Ga0163161_11845359	Not Available	538	Open in IMG/M
3300018032\|Ga0187788_10204767	Not Available	766	Open in IMG/M
3300018073\|Ga0184624_10231177	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	828	Open in IMG/M
3300018482\|Ga0066669_11582457	Not Available	598	Open in IMG/M
3300019255\|Ga0184643_1498455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1181	Open in IMG/M
3300019875\|Ga0193701_1012432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1697	Open in IMG/M
3300020062\|Ga0193724_1015843	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300021445\|Ga0182009_10332646	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → Symbiodinium microadriaticum	772	Open in IMG/M
3300021510\|Ga0222621_1039257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	983	Open in IMG/M
3300021951\|Ga0222624_1279593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1286	Open in IMG/M
3300022756\|Ga0222622_11196058	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300022898\|Ga0247745_1007752	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300023069\|Ga0247751_1038551	All Organisms → cellular organisms → Bacteria → Proteobacteria	785	Open in IMG/M
3300023071\|Ga0247752_1002118	All Organisms → cellular organisms → Bacteria	2596	Open in IMG/M
3300024186\|Ga0247688_1011843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1228	Open in IMG/M
3300024187\|Ga0247672_1016004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1190	Open in IMG/M
3300024279\|Ga0247692_1010343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1445	Open in IMG/M
3300025898\|Ga0207692_10439811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	819	Open in IMG/M
3300025903\|Ga0207680_11307022	Not Available	516	Open in IMG/M
3300025906\|Ga0207699_10109855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1765	Open in IMG/M
3300025908\|Ga0207643_10682776	Not Available	663	Open in IMG/M
3300025911\|Ga0207654_10072191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2054	Open in IMG/M
3300025911\|Ga0207654_11349013	Not Available	520	Open in IMG/M
3300025912\|Ga0207707_11584152	Not Available	516	Open in IMG/M
3300025916\|Ga0207663_10346838	All Organisms → cellular organisms → Bacteria	1123	Open in IMG/M
3300025923\|Ga0207681_10385603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1129	Open in IMG/M
3300025929\|Ga0207664_11208071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	674	Open in IMG/M
3300025931\|Ga0207644_10726890	All Organisms → cellular organisms → Bacteria → Proteobacteria	829	Open in IMG/M
3300025931\|Ga0207644_10888601	Not Available	747	Open in IMG/M
3300025935\|Ga0207709_10204540	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300025937\|Ga0207669_10663212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300025938\|Ga0207704_10192164	All Organisms → cellular organisms → Bacteria	1486	Open in IMG/M
3300025941\|Ga0207711_11221259	Not Available	693	Open in IMG/M
3300028065\|Ga0247685_1001045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	3926	Open in IMG/M
3300028145\|Ga0247663_1086673	Not Available	562	Open in IMG/M
3300028718\|Ga0307307_10028866	All Organisms → cellular organisms → Bacteria	1568	Open in IMG/M
3300028721\|Ga0307315_10206675	All Organisms → cellular organisms → Bacteria → Proteobacteria	609	Open in IMG/M
3300028790\|Ga0307283_10226741	Not Available	542	Open in IMG/M
3300028799\|Ga0307284_10032692	All Organisms → cellular organisms → Bacteria	1750	Open in IMG/M
3300028799\|Ga0307284_10247023	Not Available	709	Open in IMG/M
3300028807\|Ga0307305_10097897	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300031152\|Ga0307501_10116811	Not Available	692	Open in IMG/M
3300031938\|Ga0308175_100334292	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300031996\|Ga0308176_10321921	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300032075\|Ga0310890_11260302	Not Available	604	Open in IMG/M
3300032122\|Ga0310895_10739649	Not Available	514	Open in IMG/M
3300032174\|Ga0307470_11605093	Not Available	544	Open in IMG/M
3300032180\|Ga0307471_102484951	Not Available	655	Open in IMG/M
3300032205\|Ga0307472_102277986	Not Available	548	Open in IMG/M
3300032892\|Ga0335081_10549459	Not Available	1439	Open in IMG/M
3300033412\|Ga0310810_11494693	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Rikenellaceae → Rikenella → Rikenella microfusus	502	Open in IMG/M
3300033433\|Ga0326726_10649505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1016	Open in IMG/M
3300033475\|Ga0310811_10204981	All Organisms → cellular organisms → Bacteria	2401	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.26%
Host-Associated	Host-Associated	25.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.32%
Plants	Host-Associated → Plants	25.74%
Aquatic	Environmental → Aquatic	5.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.33%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.93%
Sediment	Environmental → Aquatic → Sediment	2.97%
Freshwater	Environmental → Aquatic → Freshwater	1.98%
Marine	Environmental → Aquatic → Marine	0.99%
Peat	Environmental → Terrestrial → Peat	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.50%
Loam	Environmental → Terrestrial → Soil → Loam	15.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.92%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.98%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.98%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.92%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.96%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.98%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.98%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.99%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.97%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.97%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.97%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.97%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.98%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.98%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.98%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.98%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.98%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.98%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.98%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.99%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.99%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.99%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.99%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.99%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.99%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.99%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003572	Grassland soil microbial communities from Hopland, California, USA - Sample H3_Bulk_40 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300020062	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300023069	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5	Environmental	Open in IMG/M
3300023071	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S019-104C-5	Environmental	Open in IMG/M
3300024186	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK29	Environmental	Open in IMG/M
3300024187	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK13	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028065	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK26	Environmental	Open in IMG/M
3300028145	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK04	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300031152	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_S	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_105450612	3300000891	Soil	MRLKILVLALVSALVAVSAAVAKDHPGKGPKPNHGCKPAVTVMLAGTLAADVDPQDGDTSFVL
F14TB_1068295721	3300001431	Soil	MRLKVLVYALVAALVAAPAAVAKDHPGKDHPSNKGKKPPISGANCKPAVTVMLSGVLGSDVDPADGDTSFVLTVKQSNKHGRTFKNAGSATILVGTGTKVRRQ
C688J35102_1202977361	3300002568	Soil	MRLKILVLALVASLVAVSAAVAKDHPGNGPKPKTGAGCKPSATVMLAGTLAADVDPEDGDTSFVLTVKRSNRHGRAYGQAGTATILVDSKTRVRREGAKTLGALAP
soilH1_101009361	3300003321	Sugarcane Root And Bulk Soil	MRFKFLALALVASLVAVSAATAKGKPSKTGENCRPKVTVMLAGVLAPDVDPQD
Ga0007424J51698_11084402	3300003572	Avena Fatua Rhizosphere	MRLKFLILALVVSLVGVSAAAAKRDPAKGKPPTTGVGCKPSVKVVLSGVLAADVDPADGDTSFVLIVKRSNKHGRAYKAVGTASVLVDAKT
Ga0055455_100086644	3300003990	Natural And Restored Wetlands	MRIKLFAFALLASLVAVSAAVAGGNPGKGKPSTRGGDCRPAHVILAGTLGADVDPADGDTSFVLTVKRANRFGRAYK
Ga0062591_1007511271	3300004643	Soil	MRLKILVLALVASLVTVSAAVAKDHPGKGPKPKTGQGCKPSVTVMLSGTLDASVDPQDGDASFVLTVKSSNRHGRAYKQAGTATVLVSAKTRVRREGAKTLGALAPNDRV
Ga0066869_101120851	3300005165	Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGHKPTTGTGCKPAVTVMLAGTLAADADPQDGDTSFVLTVKNANRHGRAYKEAGTATILVDSHTK
Ga0070690_1001243231	3300005330	Switchgrass Rhizosphere	MRFKILVLALASALVATSAAVAKDHPGNQSKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTVKS
Ga0070690_1011889622	3300005330	Switchgrass Rhizosphere	MRLKILVFALVASLVAVSAAVAKDHPGKGPKPKVGQGCKPSVTVMLSGTLAADVDPQDGDTSFVLTVKRSNRHGRAYKQAGTA
Ga0070671_1009454161	3300005355	Switchgrass Rhizosphere	MRFRILVLALVSALVAASAAVAKDHPGNGPKAKTGAGCRPAVTVMLAGTLAADVDPQDGDTSFVLTVQQSNRHGGAYKT
Ga0070667_1006711162	3300005367	Switchgrass Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDASFVLTVKNANRHGRAYKQAGTATILVDSHTKVRRQGAKTL
Ga0070709_103315452	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRFRILVLALVSALVATSAAVAKDHPGNQGKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTVKSSNRHGGAYKTAGTATILVDAKTKVRRQGAKNLGALA
Ga0070709_116691602	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGNGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVTQSNRHGNAYK
Ga0070714_1007613932	3300005435	Agricultural Soil	MRFRILVLALVSALVATSAAVAKDHPGNQGKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALT
Ga0070711_1010861572	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGNGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVTQSNRHGNA
Ga0070685_104966582	3300005466	Switchgrass Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAAGVDPQDGDASFVLTVKNANRHGRAYKQAGTATILVDSHTKVRRQGAKTLG
Ga0068853_1014274042	3300005539	Corn Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDASFVLTVKNANRHGRAYKQAGTATILVDSHTKVRRQGAKTLGALAPNDRVHVTGK
Ga0070704_1005658502	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRFRILVLALVSALVATSAAVAKDHPGNQGKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTVKSSNRHGGAYKTAGTATILVDAKTKVRRQGAKNLGA
Ga0068855_1024412781	3300005563	Corn Rhizosphere	MRLKILVLALISALVAVSAAVAKDHPGKGPKPNHGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVKHSNRHGRAYKATGTATILVDAK
Ga0068856_1021934221	3300005614	Corn Rhizosphere	MRLKILVLALVASLVAVSAAVAQDHPGKGPKPKTGVGCKPGVTVMLAGTLAPDVDPQDGDASFVLTVKQSNRHGRAYKQAGTATVLVDTHTRVRREGAKTLGALAPNDRVHVTA
Ga0066652_1016405082	3300006046	Soil	MRFKSLVFFLVAALIAVSAAFAQGNPGKGKGSAKPCKANVTVMLSGMLAADVDPQDGDSSFVLMVKHSNKHGRAYKTAGSATILVGTKTR
Ga0070715_105146041	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRFKILVLALASALVATSAAVAKDHPGNQSKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFAL
Ga0074057_110260221	3300006605	Soil	MRLKLLVFALVASLVAVSAAIAKDHPGNGKAPKSGHECRASVAVVLKGALAPDVDPADGDTSFAMLVKRANRHGRAYRKAGSATLAVDAKTRVNRRGAHNLGALGPNDRLL
Ga0079222_117642101	3300006755	Agricultural Soil	MRFKILALALVSALVMVSAAVAKDHPSNPGKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDTSFVLTVKQSNRHGRAYKTAGTATVGG
Ga0079221_115276232	3300006804	Agricultural Soil	MRLKILVFALVASLVAVSAAVAKDHPGKGPKPKVGQGCKPSVTVMLSGTLAADVDPQDGDTSFVLTVKRSNRHGRAYKQAGTATVLVDTKT
Ga0075425_1000527561	3300006854	Populus Rhizosphere	MRLKILVFALVASLVAVSAAVAKDHPGKGPKPKVGQGCKPSVTVMLSGTLAADVDPQDGDTSFVLTVKRSNRHGRAYKQAGTATVLVDTKTRVR
Ga0075436_1003707242	3300006914	Populus Rhizosphere	MRFRILVLALVSALVATSAAVAKDHPGKQGKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTVKSSNRHGGAY
Ga0105250_102885201	3300009092	Switchgrass Rhizosphere	MRLKILVLALVASLVAVTAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDASFVLTVKNANRHGRAYKQAGTATILVDSHTKVRRQGAKTLGALAPND
Ga0105240_107524791	3300009093	Corn Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAAGVDPQDGDASFVLTVKNANRHGRAYKQAG
Ga0105241_122421552	3300009174	Corn Rhizosphere	MRFRILVLALVSALVATSAAVAKDHPGNQGKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTV
Ga0126315_101897453	3300010038	Serpentine Soil	MRFKLLVLALVASLVAVSAATAKGKPSKTGANCRPAVTVMLAGVLAADVDPQDGDASFVLMVKSSNRHGRAYKQAGSATVLVDAKTRVRREGAKSLGALAPNDRVHVTAK
Ga0134082_105393712	3300010303	Grasslands Soil	MRLKLAFLPLVVALVAASAAVAKDHPGKNNPPSCKPSVTVMLKGVLAPGVDPADGDASFDLTV
Ga0126376_124270642	3300010359	Tropical Forest Soil	MRFRILVLALASALVATSAAVAKDHPGNHGKGHKPSTGAGCKPSVTVMLAGTLAATVDPQDGDTSFVLTVKSSNRHGRAYKTAGTATILVDARWLV
Ga0134125_107278251	3300010371	Terrestrial Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAAGVDPQDGDASFVLTVKNANRHGRAYK
Ga0134122_128918181	3300010400	Terrestrial Soil	MRFRILVLALVSALVATSAAVAKDHPGNQGKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTVKSSNRHGGAYKTAGTATILVDAKTKVRRQGAKNLGALAPNDRV
Ga0137365_113473762	3300012201	Vadose Zone Soil	MRLKLMVLALVASLVAVSAALAQGNPDKGSKPSCKANVTVMLSGVLASDVDPADGDASFVLTVKHANRHGRAYRTAGTANIMVVTKTRI
Ga0150984_1127540112	3300012469	Avena Fatua Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPSATVMLAGTLAADVDPEDGDTSFVLTVKRSNRHGRAYSQAGTATILVDSKTRVRREGAKTLGALAPNDRVHV
Ga0157293_100132173	3300012898	Soil	MRLKILVLALVSALVAVSAAVAKDHPGKGPKPNHGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVKHSNRHGRAYKATGTATILVDAKTHVRRQGAKTLGALAPNDRVHV
Ga0157302_100429873	3300012915	Soil	MRLKILVLALVSALVAVSAAVAKDHPGKGPKPNHGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVKHSNRHGRAYKATGTATILVDAKTHVRRQGAKTLGAL
Ga0157302_104516331	3300012915	Soil	MRLKILVLALVASLIAVSAAVAKDHPGKGPKLKTGASCKPAVAVMLAGTLAADVDPQDGDTSFVLTVMHANRHGGAYKQAGTATVLVDTHTRVRRQGAKTLGALAPN
Ga0164303_102094761	3300012957	Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAATVMLAGTLAADVDPQDGDTSFVLTVKHSNRHGRAYRQAGTAAILVD
Ga0164303_113113121	3300012957	Soil	MRLKILVLALVASLVAASAAVAKDHPGKGQKPKTGAGCKPAVTVMLAGTLAADVDPQDGDASFVLTVKNANR
Ga0164309_110869121	3300012984	Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGQKPTTGAGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVKNANRHGRAYK
Ga0164308_104487571	3300012985	Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGQKPKTGAGCKPAVTVMLAGTLAADVDPQDGDASFVLTVKNANRHGRAYKQ
Ga0157371_101374794	3300013102	Corn Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDASFVLTVKNANRHGRAYKQAGTATI
Ga0157374_122574552	3300013296	Miscanthus Rhizosphere	MRLKILVFALVASLVAVSAAVAKDHPGKGPKPKVGQGCKPSVTVMLSGTLAADVDPQDGDTSFVLTVKRSNRHGRAYKQAGTATVLVDT
Ga0134078_101837561	3300014157	Grasslands Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPSATVMLAGTLAADVDPQDGDTSFVLTVKKSNKHGRAYKQAGSATILVDAKTHVSRQGAHNLGALSPNDR
Ga0163161_118453591	3300017792	Switchgrass Rhizosphere	MRLKILVLALVSALVAVSAAVAKDHPGKGPKPNHGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVKHSNRHGHAYKAIGTATILVDAKTRVRRQG
Ga0187788_102047671	3300018032	Tropical Peatland	MRLKILILALVASLVAVSAAVAKDHPGKGNGPKSGHACKARVTVMLKGSLGPDVDPADGDTSFTMLVKRSNRHGRAYKKAGSATLSVDAKTRVNRLGAHNLGA
Ga0184624_102311771	3300018073	Groundwater Sediment	MRLKILVLALVASLVAVSAAVAKDHPGKGHKPKTGQGCKPSVTVMLAGVLDASVDPADGDTSFVLTVQRSNRHGRAYKQASTATILVDAKTRVRRQGEKTLGALAPNDRVHVT
Ga0066669_115824572	3300018482	Grasslands Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPSATVMLAGTLAADVDPQDGDTSFVLTVKRSNRRGRA
Ga0184643_14984553	3300019255	Groundwater Sediment	MRFKLLVLALVASLVAVSAATAKDHPGKGKPAKTGENCRPGVTVMLSGVLDPTVDPQDGDTSFVLTVKHSNRHGRAYKQAGSATINVDPKTKVRRQGAHNLGALAPNDRV
Ga0193701_10124321	3300019875	Soil	MRLKILVFALVASLVAVSAAVAKDHPGKGPKKPKTGHGCKPSVTVMLAGVLDASVDPADGDTSFVLTV
Ga0193724_10158433	3300020062	Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKMGAGCKPAATVMLAGTLAAEVDPQDGDTSFVLTVKRSNRHGRAYR
Ga0182009_103326462	3300021445	Soil	MRFRILVLALVSALVAASAAVAKDHPGNGPKAKTGAGCRPAVTVMLAGTLAADVDPQDGDTSFVLTVQQSNRHGRA
Ga0222621_10392571	3300021510	Groundwater Sediment	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPSVTVMLAGTLAADADPQDGDASFVLTVKRSNRQ
Ga0222624_12795931	3300021951	Groundwater Sediment	MRLKVLVLVLVASLVAVSAAVAKDHPGNKGKKPSATGAKCKPAVTVMLSGVLAADVDPADGDTSFVMVVKQSNKHGRTFKAAGSATVMVDAKTRIRRQGADNLGALA
Ga0222622_111960581	3300022756	Groundwater Sediment	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKMGAGCKPGVTVMLAGTLAADVDPQDGDASFVLTVKRSN
Ga0247745_10077521	3300022898	Soil	MRLKILVLALVSALVAVSAAVAKDHPGKGPKPNHGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVKHSNRH
Ga0247751_10385511	3300023069	Soil	MRLKILVLALVSALVAASAAVAKDHPGKGPKPNHGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVKHSNRHGRAYKATGTATILVDAKTRVRRQGAKTLGALAPNDRVHVMA
Ga0247752_10021185	3300023071	Soil	MRLKILVLALVSALVAVSAAVAKDHPGKGPKPNHGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVKHSNRHGRAYKATGTATILVDAKTHVRR
Ga0247688_10118433	3300024186	Soil	MRFKILVLALASALVATSAAVAKDHPGNQSKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTVKSSNRHGGAYKTAG
Ga0247672_10160041	3300024187	Soil	MRFKILVLALVSALVATSAAVAKDHPGNQGKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTIKSSNRHGGAYKTAGTATILVDAKTKVRRQGAKNLGALAPND
Ga0247692_10103431	3300024279	Soil	MRFKILVLALASALVATSAAVAKDHPGNQSKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTVKSSNRHGGAYKTA
Ga0207692_104398111	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRFKILVLALASALVATSAAVAKDHPGNQSKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTVKSSNRHG
Ga0207680_113070221	3300025903	Switchgrass Rhizosphere	MRFRILVLALVSALVATSAAVAKDHPGNQGKGHKPTTGAGCKASATVMLAGTLAADVDPQDGDSSFALTVKSSNRHGGAYKTAGTAT
Ga0207699_101098551	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MRFRILVLALVSALVATSAAVAKDHPGNQGKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTVKSSNRHGGAYKTAG
Ga0207643_106827762	3300025908	Miscanthus Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGNGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVTFTFSSR
Ga0207654_100721911	3300025911	Corn Rhizosphere	MRFRILVLALVSALVATSAAVAKDHPGNQGKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSF
Ga0207654_113490131	3300025911	Corn Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVKNANRHGRAYKQAGTATILVDSNT
Ga0207707_115841521	3300025912	Corn Rhizosphere	MRLKILVFALVASLVAVSAAVAKDHPGKGPKPKVGQGCKPSVTVMLSGTLAGDVDPQDGDTSFVLTVKRSNR
Ga0207663_103468381	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGKGQKPKTGAGCKPAVTVMLAGTLAAGVDPQDGDASFVLTVKNANRHGRAYKQAGTATILVDSHTKVRR
Ga0207681_103856031	3300025923	Switchgrass Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDASFVLTVKNANRHGRAYKQAGTATILVDSHTKV
Ga0207664_112080712	3300025929	Agricultural Soil	MRFKILVLALASALVATSAAVAKDHPGNQSKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTVKSSNRHGGAYKTAGTATILVDAKTKVRRQGAKNLGALAPN
Ga0207644_107268901	3300025931	Switchgrass Rhizosphere	MRLKILVFALIASLVAVSAAVAKDHPGKGPKPKVGQGCKPSVTVMLSGTLAADVDPQDGDTSFVLTVKGSNRHGRAYKQAGT
Ga0207644_108886012	3300025931	Switchgrass Rhizosphere	MRFRILVLALVSALVAASAAVAKDHPGNGPKAKTGAGCRPAVTVMLAGTLAADVDPQDGDTSFVLTVQQSNRHGGAYKTA
Ga0207709_102045403	3300025935	Miscanthus Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDASFVLTVKNANRHGRAYKQAGTATILVDSHTKVRRQGAKTLGALAPNDRVH
Ga0207669_106632121	3300025937	Miscanthus Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDASFVLTVKNANRHGRAYKQAGTATILVDSHTKVRRQGAW
Ga0207704_101921643	3300025938	Miscanthus Rhizosphere	MRLKVLVLVLVASLVAVSAAVAKDHPGNKGKKPPATGAKCKPAVTVMLSGVLGADVDPADGDMSFVMV
Ga0207711_112212591	3300025941	Switchgrass Rhizosphere	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDASFVLTVKNANRHGRAYKQAGTATILVDSHTKVRRQ
Ga0247685_10010451	3300028065	Soil	MRFKILVLALASALVATSAAVAKDHPGNQSKGHKPTTGASCKPSVTVMLAGTLAADVDPQDGDSSFALTVKSSNRHGGAYKTAGTATILVDAKTKVRRQGAKNLGALAPND
Ga0247663_10866732	3300028145	Soil	MRFKILVLALASALVATSAAVAKDHPGNQSKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTVKSSNRHGGAYKTAGTATILVDAKTKVRRQ
Ga0307307_100288661	3300028718	Soil	MRLKLMILALIASLVAVSAALAQGNPGKGKGSKPSCKANVTVMLSGVLASDVDPADGDASFVLTVKHANRHGRAYKTAGTANILVVTKTR
Ga0307315_102066751	3300028721	Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVKHSNRHGRAFRQAGTATI
Ga0307283_102267411	3300028790	Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPSVTVMLAGTLAADADPQDGDASFVLTVKRSNRHGRAYRQAGTA
Ga0307284_100326921	3300028799	Soil	MRLKILVFALVASLVAVSAAVAKDHPGKGPKKPKTGHGCKPSVTVMLAGVLDASVDPADGDTSFVL
Ga0307284_102470231	3300028799	Soil	MRFKLLVLALVASLVAVSAATAKDHPGKGKPAKTGENCRPAVTVMLSGVLDPTVDPQDGDTSFVLTVKHSNRHGRAYKQAGSATIMVGAKTRVRRQGAKNLGALAPN
Ga0307305_100978971	3300028807	Soil	MRFKLLVLALVASLVAVSAATAKDHPGKGKPAKTGENCRPGVTVMLSGVLDPTVDPQDGDTSFVLTVKHSNRHGRAYKQAGSATIMVGAKTRVRRQGAKNLGAL
Ga0307501_101168111	3300031152	Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAATVMLAGTLAADVDPQDGDTSFVLTVKR
Ga0308175_1003342923	3300031938	Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGQGCKPSVTVMLSGTLAADVDPQDGDTSFVLTVKASNRHGGAYKQAGAATVLVDAKTRVRREGAKTLGALAPNDR
Ga0308176_103219211	3300031996	Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGQGCKPSVTVMLSGTLAADVDPQDGDTSFVLTVKASNRHGGAYKQAGAATVLVDAKTRVRREGAKTLGALAPN
Ga0310890_112603022	3300032075	Soil	MRLKILVLALISALVAVSAAVAKDHPGKGPKPNHGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVKHSNRHGRAYKATGTATMLVDAKTRVRREGAKT
Ga0310895_107396491	3300032122	Soil	MRFRILVLALVSALVATSAAVAKDHPGNQGKGHKPTTGAGCKPSVTVMLAGTLAADVDPQDGDSSFALTVKSSNRHGRAYKTAGTATILVD
Ga0307470_116050932	3300032174	Hardwood Forest Soil	MRLKILVLALVSALVAVSAAVAKDHPGKGPKPNHGCKPAVTVMLAGTLAADVDPQDGDTSFVLTVKHSNRHGH
Ga0307471_1024849512	3300032180	Hardwood Forest Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDASFVLTVKNANRHGRAYKQAGTATILVDSNTKVRRQGAKTLGALAPNDR
Ga0307472_1022779861	3300032205	Hardwood Forest Soil	MRLKILVLALVASLVAVSAAVAKDHPGKGPKPKTGAGCKPAVTVMLAGTLAADVDPQDGDASFVLTVKNANRHGRAYKQAGTATILVDSHTKVRRQGAKTLGALAPND
Ga0335081_105494591	3300032892	Soil	MRLKFLILALVASLVAVSAAVAKDHPGNNGKGPNAGHACKARVTVMLVGSLAADVDPADGDTSFTMLVKRSNRHGRAYKKAGSATLTVDAKTRVNRLGAHNLGALAP
Ga0310810_114946931	3300033412	Soil	MRLKILVLALVASLVAVSAAVAQDHPGKGPKPKTGVGCKPGVTVMLAGTLAPDVDPQDGDASFVLTV
Ga0326726_106495051	3300033433	Peat Soil	MRLKFLILALVASLVAVSAAVAKDHPGKGPKSGQTCKARVAVVLKGSLGPDVDPADGDTSFVMLVKQSNRHGRAYKAAGSA
Ga0310811_102049815	3300033475	Soil	MRLKILVLALVASLVAVSAAVAQDHPGKGPKPKTGVGCKPGVTVMLAGTLAPDVDPQDGDTSFVLTVKQS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F103953

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences