Metagenome Family F103971

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F103971
Family Type	Metagenome
Number of Sequences	101
Average Sequence Length	101 residues
Representative Sequence	IREDVRDSLLRAQLEAHEAVHRAQAAAFPTCEAFMAELRTARRIIDVELPAYCAQWRVAVAQGAEPVETRREFAWRIAAQSGAMENRLDVLQRFERECGPV
Number of Associated Samples	90
Number of Associated Scaffolds	101

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.13 %
% of genes near scaffold ends (potentially truncated)	82.18 %
% of genes from short scaffolds (< 2000 bps)	90.10 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.84

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.040 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.871 % of family members)
Environment Ontology (ENVO)	Unclassified (23.762 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.574 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.57% β-sheet: 0.00% Coil/Unstructured: 36.43%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.84
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.84
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SCOP family	SCOP domain	Representative PDB	TM-score
f.61.1.1: Multidrug and toxic compound extrusion (MATE) transporters	d3mkua_	3mku	0.58267
d.58.29.0: automated matches	d2w01a_	2w01	0.57913
a.104.1.0: automated matches	d4r21a_	4r21	0.56899
c.37.1.1: Nucleotide and nucleoside kinases	d1gsia_	1gsi	0.56782
a.104.1.0: automated matches	d4dvqa_	4dvq	0.56701

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 101 Family Scaffolds
PF14014	DUF4230	12.87
PF03061	4HBT	4.95
PF01925	TauE	3.96
PF13023	HD_3	2.97
PF04542	Sigma70_r2	1.98
PF00392	GntR	1.98
PF12088	DUF3565	1.98
PF00873	ACR_tran	0.99
PF00293	NUDIX	0.99
PF14340	DUF4395	0.99
PF04343	DUF488	0.99
PF12680	SnoaL_2	0.99
PF13302	Acetyltransf_3	0.99
PF09844	DUF2071	0.99
PF08327	AHSA1	0.99
PF00005	ABC_tran	0.99
PF07929	PRiA4_ORF3	0.99
PF13414	TPR_11	0.99
PF12098	DUF3574	0.99
PF12681	Glyoxalase_2	0.99
PF06172	Cupin_5	0.99
PF07883	Cupin_2	0.99
PF09587	PGA_cap	0.99
PF12833	HTH_18	0.99

COG ID	Name	Functional Category	% Frequency in 101 Family Scaffolds
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	3.96
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	1.98
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	1.98
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	1.98
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	1.98
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	0.99
COG3542	Predicted sugar epimerase, cupin superfamily	General function prediction only [R]	0.99

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.04 %
Unclassified	root	N/A	3.96 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.04 %
Unclassified	root	N/A	3.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.04 %
Unclassified	root	N/A	3.96 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	72.28 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.96 %
Unclassified	root	N/A	3.96 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.99 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	72.28 %
Unclassified	root	N/A	3.96 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.99 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.99 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	72.28 %
Unclassified	root	N/A	3.96 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.99 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.99 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	72.28 %
Unclassified	root	N/A	3.96 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.99 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.99 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	71.29 %
Unclassified	root	N/A	3.96 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.99 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.99 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.99 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	71.29 %
Unclassified	root	N/A	3.96 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	0.99 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.99 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.99 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	71.29 %
Unclassified	root	N/A	3.96 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.99 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	0.99 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.99 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_9007020	All Organisms → cellular organisms → Bacteria	2608	Open in IMG/M
3300000890\|JGI11643J12802_11725415	All Organisms → cellular organisms → Bacteria	791	Open in IMG/M
3300000953\|JGI11615J12901_10322424	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	683	Open in IMG/M
3300003324\|soilH2_10234358	All Organisms → cellular organisms → Bacteria → Proteobacteria	4725	Open in IMG/M
3300003987\|Ga0055471_10043519	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300003992\|Ga0055470_10021870	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300004114\|Ga0062593_101397412	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	748	Open in IMG/M
3300004114\|Ga0062593_102287023	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	607	Open in IMG/M
3300005341\|Ga0070691_10538606	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	680	Open in IMG/M
3300005344\|Ga0070661_100470626	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1002	Open in IMG/M
3300005355\|Ga0070671_100789434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	826	Open in IMG/M
3300005436\|Ga0070713_100777003	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	917	Open in IMG/M
3300005436\|Ga0070713_101309623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	702	Open in IMG/M
3300005438\|Ga0070701_10301430	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	985	Open in IMG/M
3300005451\|Ga0066681_10427213	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	814	Open in IMG/M
3300005467\|Ga0070706_100434212	All Organisms → cellular organisms → Bacteria	1222	Open in IMG/M
3300005546\|Ga0070696_100111428	All Organisms → cellular organisms → Bacteria → Proteobacteria	1971	Open in IMG/M
3300005546\|Ga0070696_100827915	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	763	Open in IMG/M
3300005558\|Ga0066698_10734917	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	647	Open in IMG/M
3300005618\|Ga0068864_100180729	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1928	Open in IMG/M
3300005713\|Ga0066905_101603046	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300005719\|Ga0068861_100915479	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	831	Open in IMG/M
3300005843\|Ga0068860_102801700	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	505	Open in IMG/M
3300005873\|Ga0075287_1004071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1746	Open in IMG/M
3300005875\|Ga0075293_1013656	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	962	Open in IMG/M
3300005884\|Ga0075291_1037755	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	625	Open in IMG/M
3300005884\|Ga0075291_1063889	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	510	Open in IMG/M
3300006163\|Ga0070715_10235026	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	950	Open in IMG/M
3300006175\|Ga0070712_101860708	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	527	Open in IMG/M
3300006755\|Ga0079222_11309129	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	661	Open in IMG/M
3300006844\|Ga0075428_101766778	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	644	Open in IMG/M
3300006846\|Ga0075430_100434160	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1084	Open in IMG/M
3300006847\|Ga0075431_100630866	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1053	Open in IMG/M
3300006847\|Ga0075431_102135482	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	515	Open in IMG/M
3300006854\|Ga0075425_100025006	All Organisms → cellular organisms → Bacteria	6579	Open in IMG/M
3300006871\|Ga0075434_100028846	All Organisms → cellular organisms → Bacteria	5458	Open in IMG/M
3300006904\|Ga0075424_100436701	All Organisms → cellular organisms → Bacteria	1397	Open in IMG/M
3300006914\|Ga0075436_100624563	Not Available	795	Open in IMG/M
3300006954\|Ga0079219_12015333	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	549	Open in IMG/M
3300006954\|Ga0079219_12242427	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	527	Open in IMG/M
3300007004\|Ga0079218_13244624	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	550	Open in IMG/M
3300007076\|Ga0075435_100248798	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300007076\|Ga0075435_100828472	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	806	Open in IMG/M
3300009094\|Ga0111539_11255614	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	860	Open in IMG/M
3300009100\|Ga0075418_11532346	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	724	Open in IMG/M
3300009147\|Ga0114129_12252945	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	655	Open in IMG/M
3300010039\|Ga0126309_11161865	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	528	Open in IMG/M
3300010371\|Ga0134125_11389061	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300010371\|Ga0134125_12586698	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	552	Open in IMG/M
3300010397\|Ga0134124_11465916	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	710	Open in IMG/M
3300010401\|Ga0134121_10122105	All Organisms → cellular organisms → Bacteria	2201	Open in IMG/M
3300010999\|Ga0138505_100029871	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	738	Open in IMG/M
3300011444\|Ga0137463_1011280	All Organisms → cellular organisms → Bacteria	3071	Open in IMG/M
3300012093\|Ga0136632_10315392	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	703	Open in IMG/M
3300012187\|Ga0136622_10348198	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	621	Open in IMG/M
3300012355\|Ga0137369_10315937	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1153	Open in IMG/M
3300012910\|Ga0157308_10120566	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	800	Open in IMG/M
3300012944\|Ga0137410_10073153	All Organisms → cellular organisms → Bacteria → Proteobacteria	2489	Open in IMG/M
3300012955\|Ga0164298_10086712	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1621	Open in IMG/M
3300012955\|Ga0164298_10316441	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	973	Open in IMG/M
3300014310\|Ga0075331_1029243	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1220	Open in IMG/M
3300014325\|Ga0163163_12992447	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	527	Open in IMG/M
3300015371\|Ga0132258_12939427	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1183	Open in IMG/M
3300018075\|Ga0184632_10113318	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300018079\|Ga0184627_10500011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	627	Open in IMG/M
3300018422\|Ga0190265_12215210	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	652	Open in IMG/M
3300018429\|Ga0190272_13245011	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	507	Open in IMG/M
3300019789\|Ga0137408_1202941	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	865	Open in IMG/M
3300021080\|Ga0210382_10372898	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	631	Open in IMG/M
3300021081\|Ga0210379_10386075	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	618	Open in IMG/M
3300022694\|Ga0222623_10291617	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	627	Open in IMG/M
3300025537\|Ga0210061_1013350	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300025792\|Ga0210143_1018660	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300025796\|Ga0210113_1020043	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300025917\|Ga0207660_10633129	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	872	Open in IMG/M
3300025917\|Ga0207660_10900350	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	722	Open in IMG/M
3300025922\|Ga0207646_10973091	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	751	Open in IMG/M
3300025928\|Ga0207700_11148986	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	694	Open in IMG/M
3300025931\|Ga0207644_11835497	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	507	Open in IMG/M
3300025936\|Ga0207670_10595189	Not Available	907	Open in IMG/M
3300025959\|Ga0210116_1123471	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	514	Open in IMG/M
3300025996\|Ga0208777_1012592	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	717	Open in IMG/M
3300026004\|Ga0208416_1000397	All Organisms → cellular organisms → Bacteria	2689	Open in IMG/M
3300026067\|Ga0207678_10292865	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1398	Open in IMG/M
3300026067\|Ga0207678_10795773	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	835	Open in IMG/M
3300027787\|Ga0209074_10509904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	523	Open in IMG/M
3300028589\|Ga0247818_11296364	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	523	Open in IMG/M
3300028608\|Ga0247819_10464555	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	742	Open in IMG/M
3300028807\|Ga0307305_10534118	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	524	Open in IMG/M
3300028812\|Ga0247825_11047868	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	593	Open in IMG/M
3300030006\|Ga0299907_10936947	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	641	Open in IMG/M
3300030336\|Ga0247826_11596988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	531	Open in IMG/M
3300031548\|Ga0307408_100657564	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	938	Open in IMG/M
3300031852\|Ga0307410_10669282	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	872	Open in IMG/M
3300031940\|Ga0310901_10554989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	521	Open in IMG/M
3300031944\|Ga0310884_10564729	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	676	Open in IMG/M
3300032002\|Ga0307416_101231768	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	854	Open in IMG/M
3300033407\|Ga0214472_11758989	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	523	Open in IMG/M
3300034099\|Ga0373902_018060	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.28%
Host-Associated	Host-Associated	26.73%
Engineered	Engineered	0.99%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.42%
Plants	Host-Associated → Plants	26.73%
Aquatic	Environmental → Aquatic	13.86%
Bioremediation	Engineered → Bioremediation	0.99%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	57.43%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.78%
Marine	Environmental → Aquatic → Marine	5.94%
Freshwater	Environmental → Aquatic → Freshwater	3.96%
Sediment	Environmental → Aquatic → Sediment	3.96%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.96%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.99%
Roots	Host-Associated → Plants → Roots	0.99%
Metal	Engineered → Bioremediation → Metal	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.84%
Loam	Environmental → Terrestrial → Soil → Loam	14.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.92%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.94%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.98%
Ice	Environmental → Aquatic → Freshwater → Ice	1.98%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.99%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.99%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.84%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.86%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	7.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.92%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	5.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.94%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.94%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.95%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.98%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.98%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.99%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.99%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.99%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.99%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.99%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	0.99%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.87%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.93%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	5.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.94%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	5.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.95%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.96%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.96%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.97%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.98%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.98%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.98%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.98%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.98%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.99%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.99%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.99%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.99%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.99%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.99%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.99%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.99%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.99%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.99%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.99%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	0.99%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012187	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ448 (21.06)	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300014310	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025537	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025959	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025996	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301 (SPAdes)	Environmental	Open in IMG/M
3300026004	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302 (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033480	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D5_B	Environmental	Open in IMG/M
3300034099	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - B1A0.3	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_01144270	2088090015	Soil	VTRCDSGQVVSEIREDVRRSDLRAEVEAHEAVHRHQAAAYGGCEAFLASLTTARRIIESELPAYCAQWKVAVARGADSVATRLDYAWRISAQSGAMENRLDITRRFRDECG
JGI11643J12802_117254151	3300000890	Soil	VHRAQAAQFATCEDFTASLATARQIIEVELPAYCAQWRVAIAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK*
JGI11615J12901_103224241	3300000953	Soil	SFVLAQLEAHEAVHRAQASSFSSCDAFIASIRSARQVIDVELPAYCAQWKIAVAQGGDSVETRREYAWRISAQSGAMENRLDVLRRFRQECPLIVQ*
soilH2_102343581	3300003324	Sugarcane Root And Bulk Soil	PGITSCEGGQAVSRIRADVRDSLLRVQLEAHEAVHRAQAALFPSCEVFMAGLTTARRIIDVELPAYCAQWRVAVGQGAEPVETRREFAWRIAAQSG
Ga0055471_100435191	3300003987	Natural And Restored Wetlands	AEIEAHEAVHREQAAAHGTCEAFLATLTSARRIIDAELPAYCVQWKLLVARGADSAATRRELAWRIAAQSGAMENRLQIGQRFEEECR*
Ga0055470_100218702	3300003992	Natural And Restored Wetlands	VSRLRDDVRDPQLEAQVEAHEAVHRAQAETFASCEAFLASLTTARRIIDVELPAYCAQWRVAVGQGAEPAATRREYAWRIAAQSGAMENRLDIAHRFERECDRAPPGVR*
Ga0062593_1013974121	3300004114	Soil	GLTHCEAGRAVTRMRPDIRDTLLQAQLEAHEAVHRAQAAQFATCEDFTASLATARQIIEVELPAYCAQWRVAIAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK*
Ga0062593_1022870232	3300004114	Soil	QQLEAHEAVHRAQAAAFPTCEAFVAGLTSARRIIDVELPAYCAQWRVAVAQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFEHECEPLGEGP*
Ga0070691_105386062	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	GNAVTTFRPDVRDSLLVAEIEAHEAVHREQAAAQGNCDAFLATLTSARRIIDAELPAYCAQWRVLVARGADSAVTRREFAWRIAAQSGAMENRLQIAQQFEEECR*
Ga0070661_1004706261	3300005344	Corn Rhizosphere	DVRDSLLRLQLEAHEAVHRAQAAAFPTCEAFVAGLTSARRIIDVELPAYCAQWRVAVAQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFERECERDPVRAEGEPRRP*
Ga0070671_1007894341	3300005355	Switchgrass Rhizosphere	MLQAQLEAHEAVHRAQAAQFATCEHFTASLATARHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK*
Ga0070713_1007770032	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSRIREDVRDTLVRAQLEAHEAVHRAQAAAYPTCEAFIATLTTARQIIDVELPAYCAQWRVAVGQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFESECKLED*
Ga0070713_1013096232	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	LTRCEAGRPVTRLREDVRDTLLRAQLEAHEAVHRAQAEASGSCDAFLARIGSARQVIDVELPAYCAQWRVAVAQGAEPSATRLDYAWRIAAQSGAMENRLDILARFERECPLVPDRPAP*
Ga0070701_103014302	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	LLQAQLEAHEAVHRAQAAQFATCEHFTASLATARHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK*
Ga0066681_104272132	3300005451	Soil	VRDSLLRLQLEAHEAVHRAQAAAFPTCEAFVAGLTSARRIIDVELPAYCAQWRVAVAQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFERECELVPPHLE*
Ga0070663_1013161272	3300005455	Corn Rhizosphere	RDQATAFGSCERFLAGLTSARRIIDAELPAYCAQWRVAVEQGAVAGELRREFAWRIAAQSGAMENRLDIMHRFETECQPAPGPPT*
Ga0070706_1004342123	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	QAKAFATCEAFVAGLTSARRIIDVELPAYCAQWHVAVGQGADPVETRREFAWRIAAQSGAMENRLQVVQRFERECDLVPAPGVNNATARDRTP*
Ga0070696_1001114286	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	SDVQDTLLRAQLEAHEAVHRAQAAAYPTCEMFMAGLITARQIIDVELPAYCAQWRVAVGQGAEPVETRREFAWRIAAESGAMENRLDVVQRFERECELVPAHGASGASE*
Ga0070696_1008279151	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	GLTRCEGGRAVTRIRADVRDSLLQAQLEAHEAVHRAQAEAFPDCESFLGTLTSARRIIDVELPAYCAQWRVAVGQGADPAETRREYAWRIAAQSGAMENRLDVAQRFDRECPLSVSGSSGSAPRESGSTRN*
Ga0066698_107349172	3300005558	Soil	AHEAVHRAQAEAFPTCEAFLEKLTSARRIIDVELPAYCAQWRVAVSQGAPPAETRREFAWRIAAQSGAMENRLRVVQRFERECELESPPEGAH*
Ga0068864_1001807292	3300005618	Switchgrass Rhizosphere	ADVRDSLLRQQLEAHEAVHRAQAAAFPTCEAFVAGLTSARRIIDVELPAYCAQWRVAVAQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFEHECEPLGERP*
Ga0066905_1016030462	3300005713	Tropical Forest Soil	TCEAFTASLATARQIIDVEVPAYCAQWRVAVAQRVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFKLECPGTGG*
Ga0068861_1009154792	3300005719	Switchgrass Rhizosphere	MRPDIRDTLLQAQLEAHEAVHRAQAAQFATCEHFTASLATARHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK*
Ga0068860_1028017002	3300005843	Switchgrass Rhizosphere	LRAEIEAHEAVHRQQAAAFGGCEAFLASLTTARRIIESELPAYCAQWKVAVARGADSVATRLDYAWRISAQSGAMENRLDIARRFRDECG*
Ga0075287_10040711	3300005873	Rice Paddy Soil	AVHREQAAPFATCEAFVAGLTTARRIIDVELPAYCAQWRVAVEQGADSVETRRDLAWRIAAQSGAMENRLDVVQRFQRECELVPLPGRE*
Ga0075293_10136561	3300005875	Rice Paddy Soil	CESGRAVSRIRADIRDSLLRAQLEAHEAVHREQAAPFATCEAFVAGLTTARRIIDVELPAYCAQWRVAVEQGADSVETRRDLAWRIAAQSGAMENRLDVVQRFQRECELVPLPGRE*
Ga0075291_10377551	3300005884	Rice Paddy Soil	MTRCDSGQAVTELREDIRRSDLRPEIEAHEAVHRRQAEAYGGCENFLASLTTARRIIETELPAYCAQWKIAVARGADSSATRLDYAWRIAAQSGAMENRLDIARRFREECR*
Ga0075291_10638891	3300005884	Rice Paddy Soil	IREDVRDSLLRAQLEAHEAVHRAQAAAFPTCEAFMAELRTARRIIDVELPAYCAQWRVAVAQGAEPVETRREFAWRIAAQSGAMENRLDVLQRFERECGPV*
Ga0070715_102350262	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	VSRIREDVRDTLVRAQLAAHEAVHRAQAAAYPTCEAFIATLTTARQIIDVELPAYCAQWRVAVGQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFESECKLED*
Ga0070712_1018607082	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TRLREDVRDTLLRAQLEAHEAVHRAQAEESGSCDAFLARIGSARQVIDVELPAYCAQWRVAVAQGAEPSATRLDYAWRIAAQSGAMENRLDILARFERECPLVPDRPAP*
Ga0079222_113091291	3300006755	Agricultural Soil	RAVTRIRTDVRDSLLLAQLEAHEAVHRAQAAAYPTCQAFLAGLRTARQVIDVELPAYCAQWRVAVAQGAEPVETRREFSWRIAAQSGAMENRLQVVQRFESECAPAVPAGQSAGRATRPPAADEGR*
Ga0075428_1017667781	3300006844	Populus Rhizosphere	LRAEVEAHEAVHRQQAAAYGGCEAFLASLTTARRIIESELPAYCAQWKVAVARGADSVATRLDYAWRISAQSGAMENRLDIARRFRDECG*
Ga0075430_1004341601	3300006846	Populus Rhizosphere	RPDVRDSLLVAEIEAHEAVHREQAAAQGNCDAFLATLTSARRIIDAELPAYCAQWKVLVARGADSAVTRREFAWRIAAQSGAMENRLQIAQQFEEECR*
Ga0075431_1006308661	3300006847	Populus Rhizosphere	FVGLTHCDSGRAVTRMRADIRDTLVRAQLEAHEAVHRAQAGQFATCEAFTASLATARHIIDVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFKLECPGTGG*
Ga0075431_1021354821	3300006847	Populus Rhizosphere	EIEAHEAVHREQAAAQGNCDAFLATLTSARRIIDAELPAYCAQWKVLVARGADSAATRREFAWRIAAQSGAMENRLQIAQRFEEECR*
Ga0075425_1000250067	3300006854	Populus Rhizosphere	VTRLRPDVQDSLLREQLEAHEAVHRRQSEQFGSCEAFMASLRSARRIIEVELPAYCAQWRVAVRQRADSSSTRRDFAWRIAAQSGAMENRLEILQQLERECPLRPDQPPP*
Ga0075434_10002884611	3300006871	Populus Rhizosphere	FATCEHFTASLATARHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK*
Ga0075424_1004367011	3300006904	Populus Rhizosphere	AQLEAHEAVHRAQAAQFATCEHFTASLATARHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK*
Ga0075436_1006245632	3300006914	Populus Rhizosphere	AVHRAQAAQFATCEHFTASLATARHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK*
Ga0079219_120153331	3300006954	Agricultural Soil	QAAAYPTCQAFLAGLRTARQVIDVELPAYCAQWRVAVAQGAEPVETRREFSWRIAAQSGAMENRLQVVQRFESECAPAVPAGQSAGRATRPPAADEGR*
Ga0079219_122424271	3300006954	Agricultural Soil	RIRSDVQDTLLRAQLEAHEAVHRAQAAAYPTCEMFMAGLITARQIIDVELPAYCAQWRVAVGQGAEPVETRREFAWRIAAESGAMENRLDVVQRFERECELGPGHGASGASE*
Ga0079218_132446242	3300007004	Agricultural Soil	RCEAGTAVTNLRPDVRDSMLVEEVEAHEAVHRGQAAAHPTCEAFLATLTSALRIIDAELPAYCAQWKIAVARGADSVETRREYAWRIAAQSGAMENRLQVTQRFEAECR*
Ga0075435_1002487983	3300007076	Populus Rhizosphere	EAHEAVHRAQAGQFATCEAFTASLATARHIIDVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFKLECPGTGG*
Ga0075435_1008284722	3300007076	Populus Rhizosphere	QLEAHEAVHRAQAAQFATCEHFTASLATPRHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK*
Ga0111539_112556142	3300009094	Populus Rhizosphere	MRADIRDTLVRAQLEAHEAVHRAQAGQFATCEAFTASLATARHIIDVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFKLECPGTGG*
Ga0075418_115323461	3300009100	Populus Rhizosphere	VPAREAVHRAQAAQFATCEHFTASLATARHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK*
Ga0114129_122529452	3300009147	Populus Rhizosphere	VQDPLLRAQLEAHEAVHREQAQAFATCEAFVAGLTSARRIIDVELPAYCAQWRVAVGQGADPVETRREFAWRIAAQSGAMENRLQVVQRFERECDLVPAPG*
Ga0126309_111618652	3300010039	Serpentine Soil	CEGGQAVSRIRTDIRDSLLRAQLEAHEAVHRAQAAAFPSCEVFVAGLTSARQIIDIELPAYCAQWRVAVGQGAEPVETRRDFAWRIAAQSGAMENRLQVVQRFERECDLVSAQAGAP*
Ga0134125_113890611	3300010371	Terrestrial Soil	HEAVHRAQAAAYPTCEMFMAGLITARQIIDVELPAYCAQWRGAVGQGAEPVETRREFAWRIAAESGAMENRLDVVQRFERECELVPAHGASGASE*
Ga0134125_125866981	3300010371	Terrestrial Soil	AHEAVHRAQAEAFATCEGFLQGLTSARRIIDVELPAYCAQWRVAVSQGAPPAETRREFAWRIAAQSGAMVQRFERECDLVPPPEPAP*
Ga0134124_114659162	3300010397	Terrestrial Soil	RIRADVRDSLLRLQLEAHEAVHRAQAAAFPTCEAFVAGLTSARRIIDVELPAYCAQWRVAVAQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFEHECEPLGERP*
Ga0134121_101221052	3300010401	Terrestrial Soil	VHRAQAAQFATCEHFTASLATARHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK*
Ga0138505_1000298711	3300010999	Soil	AGQPGTELREDIRRSDLRAEIEAHEEVHRRQAAAYGGCEAFLASLTTARRIIDSELPAYCAQWKVAVTRGTDSSMTRLDYAWRIAAQSGAMENRLDIARRFRDECH*
Ga0137463_10112803	3300011444	Soil	VQDSLLRAQLEAHEAVHRAQAAAFPSCEAFVAGLTSARQIIDVELPAYCAQWRVAVGQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFERECDLVPARGRAP*
Ga0136632_103153921	3300012093	Polar Desert Sand	MAVTMVRADVRDSVALAEVEAHEEVHRRQAAEFPSCEAFLASIRTARRIIDVELPAYCAQWQLAVARGADSALTRREYAWRIAAQSGAMENRLSVAQRFEAECR*
Ga0136622_103481981	3300012187	Polar Desert Sand	RADVRDSVALAEVEAHEEVHRRQAAEFPSCEAFLASIRTARRIIDVELPAYCAQWQLAVARGADSALTRREYAWRIAAQSGAMENRLSVAQRFEAECR*
Ga0137369_103159371	3300012355	Vadose Zone Soil	GGLAVSRIRVGVQDSLLRAQLEAHEAVHRAQAAAFPSCEAFVAGLTSARQIIDIELPAYCAQWRVAVGQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFERECDLVPARARAP*
Ga0157308_101205662	3300012910	Soil	REDVRRSDLRAEVEAHEAVHRQQAAAYGGCEAFLASLTTARRIIESELPAYCAQWKVAVARGADSVATRLDYAWRISAQSGAMENRLDIARRFRDECG*
Ga0137410_100731535	3300012944	Vadose Zone Soil	VTRLRSDISDTLLLAQLRAHEAVHQPQARAFGSCREFLASLTTARRIIDVELPAYCAQWRVAGAQGADPAESRRDFAWRIAAQSGAMENRLQTTQRLERECPLVPSSPADSAAPGRGATGPHR*
Ga0164298_100867122	3300012955	Soil	REDVRDTLVRAQLEAHEAVHRAQAAAFPTCEAFVAGLTSARRIIDVELPAYCAQWRVAVAQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFERECERDPVPAEGEFRRRIRDWLKNRPG*
Ga0164298_103164411	3300012955	Soil	VSRIREDVRDTLVRAQLEAHEAVHRAQAAAYPTCEPFIATLTTARQIIDVELPAYCAQWRVAVGQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFESECKLED*
Ga0075331_10292432	3300014310	Natural And Restored Wetlands	EAGAAITTLRPDLRDSLMIAEIEAHEAVHREQAAAHGTCEAFLATLTSARRIIDAELPAYCVQWKLLVARGADSAATRRELAWRIAAQSGAMENRLQIGQRFEEECR*
Ga0163163_129924471	3300014325	Switchgrass Rhizosphere	DSLLRLQLEAHEAVHRAQAAAFPTCEAFVAGLTSARRIIDVELPAYCAQWRVAVAQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFEHECEPLGERP*
Ga0132258_129394272	3300015371	Arabidopsis Rhizosphere	VRAQLEAHEAVHRAQAGKFATCEAFTASLATARHIIDAELPAYCAQWRVAVAQGVDTIDLRRDYAWRIAAQSGAMENRLQVLQRFKLECPGAGG*
Ga0184632_101133183	3300018075	Groundwater Sediment	RPDVRDSMLVAEIEAHESVHREQAAAHESCDAFLATLTSARRIIDAELPAYCAQWKIAVTRGADSAITRREFAWRIAAQSGAMENRLQIAQRFEEECR
Ga0184627_105000111	3300018079	Groundwater Sediment	TRCEAGRAVTNLRPDVRDSMLVAEIEAHESVHREQAAAHQSCDAFLATLTSARRIIDAELPAYCAQWKVAVARGADSAITRREFAWRIAAQSGAMENRLQIAQRFEEECR
Ga0190265_122152101	3300018422	Soil	FLGVTRCEAGTAVTSLRPDVRDSMLVAEIEAHEAVHREQAAAHPTCEAFLATLTSALRIIDAELPAYCAQWKVAVARGADSAETRREYAWRIAAQSGAMENRLQVNQRFEAECR
Ga0190272_132450112	3300018429	Soil	HEAVHRAQAAAFPSCEAFVAGLTSARQIIDIELPAYCAQWRVAVGQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFERECDLVPAQAGAP
Ga0137408_12029411	3300019789	Vadose Zone Soil	PDLTDSALVAQVEAHGRVHRMQAAGYPSCQAFLATLRSARRIIEVELPAYCAQWHVAVGQGADPADTRRDYAWRLAAQSGAMENRLDILARLERECS
Ga0210382_103728982	3300021080	Groundwater Sediment	ADVQDSLLRAQLEAHEAVHRAQAAAFPSCEAFVAGLTSARRIIDIELPAYCAQWRVAVGQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFERECGLVPVRARAP
Ga0210379_103860751	3300021081	Groundwater Sediment	DVRDSMLVAEIEAHESVHREQAAAHGSCDAFLATLTSARRIIDAELPAYCAQWKVAVARGADSAITRREFAWRIAAQSGAMENRLQIAQRFEEECR
Ga0222623_102916171	3300022694	Groundwater Sediment	VQDSLLRAQLEAHEAVHRAQAAAFPSCEAFVAGLASARQIIDIELPAYCAQWRVAVGQGAEPVETRREFAWRIAAQSGAMENRLQVVQRFERECDLAPARARTP
Ga0210061_10133501	3300025537	Natural And Restored Wetlands	LRDSLMIAEIEAHEAVHREQAAAHGTCEAFLATLTSARRIIDAELPAYCVQWKLLVARGADSAATRRELAWRIAAQSGAMENRLQIGQRFEEECR
Ga0210143_10186603	3300025792	Natural And Restored Wetlands	DSLMVAEIEAHEAVHREQAAAHGTCEAFLATLTSARRIIDAELPAYCVQWKLLVARGADSAATRRELAWRIAAQSGAMENRLQIGQRFEEECR
Ga0210113_10200433	3300025796	Natural And Restored Wetlands	AGAAITTLRPDLRDSLMIAEIEAHEAVHREQAAAHGTCEAFLATLTSARRIIDAELPAYCVQWKLLVARGADSAATRRELAWRIAAQSGAMENRLQIGQRFEEECR
Ga0207660_106331292	3300025917	Corn Rhizosphere	RDTLLQAQLEAHEAVHRAQAAQFATCEHFTASLATARHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK
Ga0207660_109003502	3300025917	Corn Rhizosphere	RDSLLRAQLEAHEAVHLAQAAAFPSCEAFVGGLTSARRIIDIELPAYCAQWRVAVGQGAEPVETRRDFAWRIAAQSGAMENRLQVVQRFERECDLVPARARAP
Ga0207646_109730912	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MRPDIRDTLLQAQLEAHEAVHRAQAAQFATCEHFTASLATARHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK
Ga0207700_111489862	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	EAGRPVTRLREDVRDTLLRAQLEAHEAVHRAQAEASGSCDAFLARIGSARQVIDVELPAYCAQWRVAVAQGVEPSATRLDYAWRIAAQSGAMENRLDILARFERECPLVPDRPAP
Ga0207644_118354972	3300025931	Switchgrass Rhizosphere	MRPDIRDTMLQAQLEAHEAVHRAQAAQFATCEHFTASLATARHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK
Ga0207670_105951891	3300025936	Switchgrass Rhizosphere	EAVHRAQAAQFAACEHFTASLATARHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK
Ga0210116_11234712	3300025959	Natural And Restored Wetlands	REDVRSSSLREEIEAHEAVHRQQAATFPSCEAFLATLNTARRVIDSELPAYCAQWKVAVRAGADSAATRLEFAWRIAAQSGAMENRLDIAQRFRRECT
Ga0208777_10125921	3300025996	Rice Paddy Soil	AVHREQAAPFATCEAFVAGLTTARRIIDVELPAYCAQWRVAVEQGADSVETRRDLAWRIAAQSGAMENRLDVVQRFQRECELVPLPGRE
Ga0208416_10003973	3300026004	Rice Paddy Soil	IREDVRDSLLRAQLEAHEAVHRAQAAAFPTCEAFMAELRTARRIIDVELPAYCAQWRVAVAQGAEPVETRREFAWRIAAQSGAMENRLDVLQRFERECGPV
Ga0207678_102928653	3300026067	Corn Rhizosphere	GQVVTEIRDDVGRSELRAEIEAHEAVHRQQAAAFGGCEAFLASLTTARRIIESELPAYCAQWKVAVARGADSAATRLDYAWRISAQSGAMENRLDIARRFRDECG
Ga0207678_107957732	3300026067	Corn Rhizosphere	AQLEAHEAVHRAQAAQFATCEHFTASLATARHIIEVELPAYCAQWRVAVAQGVDTMDLRRDYAWRIAAQSGAMENRLQVLQRFQLECPGAGK
Ga0209074_105099041	3300027787	Agricultural Soil	RDSLLLAQLEAHEAVHRAQAAAYPTCQAFLAGLRTARQVIDVELPAYCAQWRVAVAQGAEPVETRREFSWRIAAQSGAMENRLQVVQRFESECAPAVPAGQSAGRATRPPAADEGR
Ga0247818_112963642	3300028589	Soil	GQVVSEIREDVRRSDLRAEVEAHEAVHRQQAAAYGGCEAFLASLTTARRIIESELPAYCAQWKVAVARGADSVATRLDYAWRISAQSGAMENRLDIARRFRDECG
Ga0247819_104645552	3300028608	Soil	LGVTNCEAGSAVTTFRPDVRDSLLVAEIEAHESIHREQAAAQGNCDAFLATLTSARRIIDAELPAYCAQWKMLVARGADSAATRREFAWRIAAQSGAMENRLQIAQRFEEECR
Ga0307305_105341181	3300028807	Soil	LTDSALVAQVEAHERVHRMQAAGFPSCQAFLAALRSARRIIEVELPAYCAQWHVAVGQGADPADTRREYAWRLAAQSGAMENRLDILARLERECS
Ga0247825_110478681	3300028812	Soil	SELRAEIEAHEAVHRQQAAAFGGCEAFLASLTTARRIIESELPAYCAQWKVAVARGADSAATRLDYAWRISAQSGAMENRLDIARRFRDECG
Ga0299907_109369472	3300030006	Soil	RPDVRDSMLVAEIEAHESVHRQQAAAYESCDAFLATLTSARRIIDAELPAYCAQWKVAVARGADSSITRREFAWRIAAQSGAMENRLQIAQRFEQECR
Ga0247826_115969882	3300030336	Soil	DLRAEIEAHEAVHRQQAAAFGGCEAFLASLTTARRIIESELPAYCAQWKVAVARGADPAATRLDYAWRISAQSGAMENRLDIARRFRDECG
Ga0307408_1006575641	3300031548	Rhizosphere	RPDVRDSMLVEEVEAHEAVHRGQAAAHPTCESFLATLTSALRIIDAELPAYCAQWKIAVARGADSAETRREYAWRIAAQSGAMENRLSVAQQFERECG
Ga0307410_106692821	3300031852	Rhizosphere	LAEVHAHEAVHRRQAAGYPSCEAFLASITTARRIIEVELPAYCAQWRIAVARGADSAVTRREYAWRIAAQSGAMENRLSVSQQFERECG
Ga0310901_105549891	3300031940	Soil	CEAGSAVTTLRPDVRDSLLVAEIEAHEAVHREQAAAQGNCDAFLATLTSARRIIDAELPAYCAQWKMLVARGADSAATRREFAWRIAAQSGAMENRLQIAQRFEEECR
Ga0310884_105647291	3300031944	Soil	SELRAEIEAHEAVHRQQAAAFGGCEAFLATLTTARRIIESELPAYCAQWKVAVARGADSVATRLDYAWRISAQSGAMENRLDIARRFRDECG
Ga0307416_1012317682	3300032002	Rhizosphere	IRDSLLLAEIGAHEEVHRRQAAEFASCEAFLASITTARRIIDIELPAYCAQWRLAVARGADSAVTRREYAWRIAAQSGAMENRLSVVQRFERECN
Ga0214472_117589891	3300033407	Soil	FLGVTRCAAGRAVTNLRPDVRDSMLVAEIEAHEAVHREQAAAHQSCDAFLATLTSARRIIDAELPAYCAQWKVAVARGADSAITRREFAWRIAAQSGAMENRLQIAQRFEEECR
Ga0316620_113881061	3300033480	Soil	RAQAARFPSCDAFMRSVSSARRIIDVELPAYCAQWRVAVRQGADPDSTRREFGWRIAAQSGAMENRLDIIERFQRECPAP
Ga0373902_018060_54_362	3300034099	Sediment Slurry	VRDSLLIAQLLAHEAVHRAQAARFPSCDAFMRSVNSARRIIDVELPAYCAQWRVAVRQGDDPDSTRREFGWRIAAQSGAMENRLDIIERFRRECPDPPGPDP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F103971

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences