NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F104067

Metagenome / Metatranscriptome Family F104067

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104067
Family Type Metagenome / Metatranscriptome
Number of Sequences 101
Average Sequence Length 63 residues
Representative Sequence MSMAELVLIYALNHGVWKMTDEGVPQICLSVPVEAPDGTSENFQGCTAVPEEILLEWLRTTYKQV
Number of Associated Samples 62
Number of Associated Scaffolds 101

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 76.24 %
% of genes near scaffold ends (potentially truncated) 27.72 %
% of genes from short scaffolds (< 2000 bps) 83.17 %
Associated GOLD sequencing projects 54
AlphaFold2 3D model prediction Yes
3D model pTM-score0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (61.386 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh
(42.574 % of family members)
Environment Ontology (ENVO) Unclassified
(50.495 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(73.267 % of family members)



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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.73%    β-sheet: 24.73%    Coil/Unstructured: 50.54%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.52
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 101 Family Scaffolds
PF16778Phage_tail_APC 7.92
PF13884Peptidase_S74 2.97
PF136402OG-FeII_Oxy_3 1.98
PF13730HTH_36 0.99



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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A61.39 %
All OrganismsrootAll Organisms38.61 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001419|JGI11705J14877_10154411Not Available620Open in IMG/M
3300005512|Ga0074648_1017866All Organisms → Viruses → Predicted Viral4126Open in IMG/M
3300005512|Ga0074648_1031778All Organisms → Viruses → Predicted Viral2638Open in IMG/M
3300005512|Ga0074648_1095459All Organisms → Viruses → Predicted Viral1062Open in IMG/M
3300005512|Ga0074648_1224724Not Available509Open in IMG/M
3300005588|Ga0070728_10318673Not Available837Open in IMG/M
3300005589|Ga0070729_10078258All Organisms → Viruses → Predicted Viral2068Open in IMG/M
3300006026|Ga0075478_10015539All Organisms → Viruses → Predicted Viral2583Open in IMG/M
3300006467|Ga0099972_10521900Not Available682Open in IMG/M
3300006467|Ga0099972_10525861Not Available615Open in IMG/M
3300006467|Ga0099972_11295202All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300006467|Ga0099972_11653668Not Available562Open in IMG/M
3300006467|Ga0099972_11761047Not Available661Open in IMG/M
3300006637|Ga0075461_10062224All Organisms → Viruses → Predicted Viral1200Open in IMG/M
3300006637|Ga0075461_10232836Not Available544Open in IMG/M
3300006802|Ga0070749_10093946All Organisms → Viruses → Predicted Viral1779Open in IMG/M
3300006802|Ga0070749_10306599All Organisms → cellular organisms → Bacteria889Open in IMG/M
3300006802|Ga0070749_10667839Not Available557Open in IMG/M
3300006802|Ga0070749_10709878Not Available537Open in IMG/M
3300006802|Ga0070749_10771234Not Available511Open in IMG/M
3300006810|Ga0070754_10336776Not Available670Open in IMG/M
3300006919|Ga0070746_10128889All Organisms → Viruses → Predicted Viral1244Open in IMG/M
3300006919|Ga0070746_10305939All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300007234|Ga0075460_10066719Not Available1330Open in IMG/M
3300007346|Ga0070753_1151970Not Available877Open in IMG/M
3300007538|Ga0099851_1224752Not Available677Open in IMG/M
3300007539|Ga0099849_1213634Not Available721Open in IMG/M
3300007960|Ga0099850_1068278All Organisms → Viruses → Predicted Viral1494Open in IMG/M
3300009000|Ga0102960_1327875Not Available540Open in IMG/M
3300009001|Ga0102963_1137482Not Available988Open in IMG/M
3300009001|Ga0102963_1354170Not Available576Open in IMG/M
3300009001|Ga0102963_1425971Not Available520Open in IMG/M
3300009027|Ga0102957_1070759All Organisms → Viruses → Predicted Viral1200Open in IMG/M
3300010296|Ga0129348_1284201Not Available553Open in IMG/M
3300010318|Ga0136656_1198895Not Available672Open in IMG/M
3300010389|Ga0136549_10097232All Organisms → Viruses → Predicted Viral1394Open in IMG/M
3300010392|Ga0118731_105407996Not Available930Open in IMG/M
3300010392|Ga0118731_113043650Not Available802Open in IMG/M
3300014042|Ga0117790_1016455All Organisms → Viruses → Predicted Viral1871Open in IMG/M
3300016723|Ga0182085_1158554Not Available1170Open in IMG/M
3300016723|Ga0182085_1178059Not Available652Open in IMG/M
3300016723|Ga0182085_1376809Not Available549Open in IMG/M
3300016723|Ga0182085_1386579All Organisms → Viruses → Predicted Viral1541Open in IMG/M
3300016758|Ga0182070_1195253Not Available616Open in IMG/M
3300016766|Ga0182091_1405857Not Available2105Open in IMG/M
3300016787|Ga0182080_1362422Not Available543Open in IMG/M
3300016787|Ga0182080_1435750All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium991Open in IMG/M
3300017949|Ga0181584_10156559All Organisms → Viruses → Predicted Viral1524Open in IMG/M
3300017950|Ga0181607_10060252All Organisms → cellular organisms → Bacteria2527Open in IMG/M
3300017950|Ga0181607_10064781All Organisms → Viruses → Predicted Viral2412Open in IMG/M
3300017950|Ga0181607_10077628All Organisms → Viruses → Predicted Viral2153Open in IMG/M
3300017950|Ga0181607_10232418All Organisms → Viruses → Predicted Viral1067Open in IMG/M
3300017950|Ga0181607_10413001Not Available734Open in IMG/M
3300017952|Ga0181583_10014607Not Available5719Open in IMG/M
3300017952|Ga0181583_10715536Not Available594Open in IMG/M
3300017956|Ga0181580_10282847All Organisms → Viruses → Predicted Viral1135Open in IMG/M
3300017958|Ga0181582_10388635Not Available891Open in IMG/M
3300017962|Ga0181581_10196266Not Available1338Open in IMG/M
3300017962|Ga0181581_10448395All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300017964|Ga0181589_10007865Not Available8511Open in IMG/M
3300017967|Ga0181590_11031761All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300017968|Ga0181587_10708954Not Available634Open in IMG/M
3300018036|Ga0181600_10027074Not Available3942Open in IMG/M
3300018036|Ga0181600_10067196All Organisms → Viruses → Predicted Viral2224Open in IMG/M
3300018036|Ga0181600_10190809All Organisms → Viruses → Predicted Viral1102Open in IMG/M
3300018041|Ga0181601_10259450Not Available984Open in IMG/M
3300018041|Ga0181601_10299799Not Available892Open in IMG/M
3300018041|Ga0181601_10434930All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300018048|Ga0181606_10169240All Organisms → Viruses → Predicted Viral1297Open in IMG/M
3300018048|Ga0181606_10451205Not Available679Open in IMG/M
3300018080|Ga0180433_10989615Not Available614Open in IMG/M
3300018421|Ga0181592_10741926All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300018421|Ga0181592_10742019Not Available652Open in IMG/M
3300018421|Ga0181592_11007017Not Available537Open in IMG/M
3300018421|Ga0181592_11049579Not Available523Open in IMG/M
3300018423|Ga0181593_10950112Not Available592Open in IMG/M
3300018424|Ga0181591_10746280Not Available684Open in IMG/M
3300019274|Ga0182073_1401329Not Available825Open in IMG/M
3300019277|Ga0182081_1213842Not Available984Open in IMG/M
3300019765|Ga0194024_1020577All Organisms → Viruses → Predicted Viral1408Open in IMG/M
3300019765|Ga0194024_1158489Not Available533Open in IMG/M
3300019937|Ga0194022_1037238Not Available640Open in IMG/M
3300020013|Ga0182086_1275550Not Available682Open in IMG/M
3300020178|Ga0181599_1199372Not Available805Open in IMG/M
3300021356|Ga0213858_10013129All Organisms → Viruses → Predicted Viral3917Open in IMG/M
3300021425|Ga0213866_10078039Not Available1832Open in IMG/M
3300021960|Ga0222715_10330938Not Available855Open in IMG/M
3300021964|Ga0222719_10026746All Organisms → Viruses → Predicted Viral4559Open in IMG/M
3300022167|Ga0212020_1085853Not Available527Open in IMG/M
3300022187|Ga0196899_1000175Not Available33740Open in IMG/M
3300022187|Ga0196899_1050991All Organisms → Viruses → Predicted Viral1358Open in IMG/M
3300022200|Ga0196901_1034657All Organisms → Viruses → Predicted Viral1955Open in IMG/M
3300022200|Ga0196901_1144966Not Available795Open in IMG/M
3300023116|Ga0255751_10232356All Organisms → Viruses → Predicted Viral1007Open in IMG/M
3300023116|Ga0255751_10307285Not Available825Open in IMG/M
3300025630|Ga0208004_1027253All Organisms → Viruses → Predicted Viral1710Open in IMG/M
3300025687|Ga0208019_1000765Not Available17392Open in IMG/M
3300025687|Ga0208019_1001783All Organisms → cellular organisms → Bacteria11201Open in IMG/M
3300025889|Ga0208644_1270156Not Available692Open in IMG/M
3300027828|Ga0209692_10075600All Organisms → Viruses → Predicted Viral1704Open in IMG/M
3300034374|Ga0348335_081299Not Available1091Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Salt MarshEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh42.57%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous25.74%
MarineEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine6.93%
Pond WaterEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water4.95%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment3.96%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater2.97%
Marine SedimentEnvironmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment2.97%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.98%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient1.98%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.98%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment0.99%
Hypersaline Lake SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment0.99%
Marine Methane Seep SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment0.99%
Epidermal MucusHost-Associated → Fish → Skin → Epidermal Mucus → Unclassified → Epidermal Mucus0.99%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001419Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)EnvironmentalOpen in IMG/M
3300005512Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_waterEnvironmentalOpen in IMG/M
3300005588Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.1EnvironmentalOpen in IMG/M
3300005589Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2EnvironmentalOpen in IMG/M
3300006026Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006467Coastal sediment microbial communities from Rhode Island, USA: Combined Assembly of Gp0121717, Gp0123912, Gp0123935EnvironmentalOpen in IMG/M
3300006637Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007234Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_<0.8_DNAEnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007539Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaGEnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300009000Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MGEnvironmentalOpen in IMG/M
3300009001Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MGEnvironmentalOpen in IMG/M
3300009027Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MGEnvironmentalOpen in IMG/M
3300010296Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNAEnvironmentalOpen in IMG/M
3300010318Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010389Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsfEnvironmentalOpen in IMG/M
3300010392Coastal sediment microbial communities from Rhode Island, USA. Combined Assembly of Gp0121717, Gp0123912, Gp0123935, Gp0139423, Gp0139424, Gp0139388, Gp0139387, Gp0139386, Gp0139385EnvironmentalOpen in IMG/M
3300014042Epidermal mucus viral and microbial communities from European eel in Spain - Ebro delta (0.22 um filter)Host-AssociatedOpen in IMG/M
3300016723Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041405ZT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016758Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071403BT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016766Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041409AS metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300016787Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071411AT metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017949Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017950Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017952Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017956Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017958Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017962Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017964Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017967Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300017968Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018036Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041406US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018041Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018048Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041412US metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018080Hypersaline lake sediment archaeal communities from the Salton Sea, California, USA - SS_1_D_1 metaGEnvironmentalOpen in IMG/M
3300018421Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018423Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300018424Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)EnvironmentalOpen in IMG/M
3300019274Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019277Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412AT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019765Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW13Sep16_MGEnvironmentalOpen in IMG/M
3300019937Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW29Aug16_MGEnvironmentalOpen in IMG/M
3300020013Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041406CT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020178Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041405US metaG (spades assembly)EnvironmentalOpen in IMG/M
3300021356Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO245EnvironmentalOpen in IMG/M
3300021425Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284EnvironmentalOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021964Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34DEnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300023116Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaGEnvironmentalOpen in IMG/M
3300025630Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_15_>0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027828Marine sediment microbial communities from the Atlantic coast under amendment with organic carbon and nitrate - tdDd47.2 (SPAdes)EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11705J14877_1015441113300001419Saline Water And SedimentMSMAEMVLIYALNHGVWKMTEEGVPQICLSVPVESSEGKTETFQGCTAVPEEILL
Ga0074648_101786663300005512Saline Water And SedimentMSMAELVLIYALNHGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTSVPEEILLEWLRTTYKQV*
Ga0074648_103177883300005512Saline Water And SedimentVSLSELVLIYALNHGVWKMTDEGVPQICLSVPVEAPDGTSENFQGCTAVPEEVLLEWLRTHYKEV*
Ga0074648_109545933300005512Saline Water And SedimentMSMAELVLIYALNHGVWKMTEEGVPQICLSVPVESSEGKTETFEGCTPVPEEILLEWLRTNYKQV*
Ga0074648_122472413300005512Saline Water And SedimentMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVEAPDGTSENFQGCTAVPEEILLEWLRTTYKQV*
Ga0070728_1031867333300005588Marine SedimentMAELVLIYALNNGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTPVPEEILLEWLRTTYKE
Ga0070729_1007825853300005589Marine SedimentMSMAELVLIYALNHGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTPVPEEILLEWLRTTYKEV*
Ga0075478_1001553943300006026AqueousMSMAEMVLIYALNNGVWKMTEEGVPQICLSVPTESSDGKPETFQGCTAVPDEILYRWLSETTIKV*
Ga0099972_1052190023300006467MarineMAELVLIYALNHGVWKMTDEGVPQICLSVPVEAPDGTSETFQGCTPVPEEILLEWLRTTYKQV*
Ga0099972_1052586133300006467MarineMAELVLIYALNNGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTAVPEEVLLEWLRTTYKEV*
Ga0099972_1129520223300006467MarineMGLSELVLIYALNHGVWKMTEEGVPQICLSVPVETPDGTSENFQGCTAVPEEVLLEWLRTNYKEV*
Ga0099972_1165366833300006467MarineMSMAELVLIYALNHGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTPVPEEILLEWLRTTYKE
Ga0099972_1176104723300006467MarineMGISELVLIYALNHATWSMNDKGIPQICLRVPVEASEGTSETFQGCTAVPEEILLKWLTEATVRV*
Ga0075461_1006222443300006637AqueousMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVESSEGKTENFQGCTAVPEEILLEWLRTTYKQV*
Ga0075461_1023283623300006637AqueousVDETLVSVAEMVLIYALNNGVWKMTADGVPQICLSVPVESSEGKTETFQGCTAVPEEMLLEWLNTAYVKV*
Ga0070749_1009394663300006802AqueousVSVAEMVLIYALNNGVWKMTADGVPQICLSVPVESSEGKTETFQGCTAVPEEMLLEWLNTAYVKV*
Ga0070749_1030659943300006802AqueousMNHGVWKMNDEGVPQICMSVPVEAPDGTSENFQGCTAVPEEILLEWLRTTYKQV*
Ga0070749_1066783923300006802AqueousMAELVLIYALNHGVWKMTEEGVPQICLSVPVESSEGKTENFQGCTAVPEEILLEWLRTTYKQV*
Ga0070749_1070987823300006802AqueousMGLSELVLIYAMNHGVWKMTEEGVPQICMSVPVEAPDGTSENFQGCTAVPEEILLEWLRTTYKQV*
Ga0070749_1077123423300006802AqueousMGLNELILIYAMNHGVWKMNDEGVPQICLSVPVESPEGTSETFQGCTAVPEEILLEWLRMTYKEV*
Ga0070754_1033677623300006810AqueousMAELVLIYALNNGVWKMTEEGVPQICLSVPVDSKDGKSETFQGCTSVPEEILYKWLLTTTVKV*
Ga0070746_1012888943300006919AqueousMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVESSEGKTENFQECTAVPEEILLEWLRTTYKQV*
Ga0070746_1030593913300006919AqueousMNHGVWKMTEEGVPQICMSVPVEAPDGTSENFQGCTAVPEEILLEWLRTNYKEV*
Ga0075460_1006671933300007234AqueousMGLSELVLIYAMNHGVWKMTEEGVPQICMSVPVEAPDGTSENFQGCTPVPEEMLLEWLRTTYKQV*
Ga0070753_115197043300007346AqueousMAELVLIYALNHGVWKMTDEGVPQICLSVPVEAPDGTSENFQGCTAVPEEILLEWLRTTYKQV*
Ga0099851_122475233300007538AqueousVSVAELVLIYALNNGVWKMTDEGVPQICLSVPVKENETFQGCTAVPEEILLEWLRTATIKA*
Ga0099849_121363443300007539AqueousMSMAEIVLIYALNHGVWKMTDEGVPQICLSVPVESSEGKTENFQGCTPVPEEILLEWL
Ga0099850_106827843300007960AqueousMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVESSEGTSETFQGCTAVPEEVLLEWLRTTYKEV*
Ga0102960_132787523300009000Pond WaterMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVEAPDGTSETFQGCTAVPEEILLEWLRTTYKEV*
Ga0102963_113748233300009001Pond WaterMAEMVLIYALNNAVWKMTEDGVPQICLSVPVEAPDGTSETFQGCTAAPEEVLLEWLRTHYTKV*
Ga0102963_135417023300009001Pond WaterMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVEAPDGTSENFQGCTAVPEEILLEWLRTTYKEV*
Ga0102963_142597123300009001Pond WaterMSMAELVLIYALNHGVWKMTDEGIPQICLSVPVEKEDGTSETFQGCTAVPEEILYKWLSDTTIKA*
Ga0102957_107075933300009027Pond WaterMAEMVLIYALNNAVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTAVPEEILLEWLRLTYKEV*
Ga0129348_128420123300010296Freshwater To Marine Saline GradientMSMAEIVLIYALNHGVWKMTDEGVPQICLSVPVESSEGKTENFQGCTPVPEEILLEWLKTNYTKV*
Ga0136656_119889523300010318Freshwater To Marine Saline GradientGVWKMTDEGVPQICLSVPVEAPDGTSENFQGCTPVPEEILLEWLRTTYKQV*
Ga0136549_1009723213300010389Marine Methane Seep SedimentAELVLIYALNHGVWKMTDEGVPQICLSVPVESSEGTSENFQGCTAVPEEILLEWLRTTYKQV*
Ga0118731_10540799633300010392MarineMSMAELVLIYALNNGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTPVPEEILLEWLRTTYKEV*
Ga0118731_11304365033300010392MarineMSMAELVLIYALNNGVWKMTDEGVPQICLSVPVEAPDGTSENFQGCTPVPEEILLE
Ga0117790_101645523300014042Epidermal MucusMAELVLIYALNHGVWKMTEEGVPQICLSVPVETPEGKTENFQGCTKVPEEILLEWLRTNYKEV*
Ga0182085_115855443300016723Salt MarshMSMAEIVLIYALNHGVWKMTDEGIPQICLSVPVEKEDGTSETFQGCTAVPEEILYKWLSDTTIK
Ga0182085_117805923300016723Salt MarshAELVLIYALNHGVWKMTEEGVPQICLSVPVESSEGKTENFQGCTPVPEEILLEWLRTTYKQV
Ga0182085_137680933300016723Salt MarshMSMAEIVLIYALNHGVWKMTDEGIPQICLSVPVEKEDGTSETFQGCTAVPEEILYKWLSDTTI
Ga0182085_138657943300016723Salt MarshMGRCVVYCRVDETMSMAELVLIYALNNGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTAVPEEVLLEWLKTNYKEV
Ga0182070_119525323300016758Salt MarshMSMAELVLIYALNNGVWKMTDEGVPQICLSVPVESSEGKTENFQGCTAVPEEIFLEWLRTTYKQV
Ga0182091_140585753300016766Salt MarshMSMAEMLLIYALNHGVWKMTDEGIPQICLSVPVEKEDGTSETFQGCTAVPEEILYKWLSDTTIKT
Ga0182080_136242213300016787Salt MarshMSITELVLIYALNHGVWKMTEEGIPQICLSVPVEAPDGTSENFQGCTAVPEEVLLEWLRLTYKEV
Ga0182080_143575033300016787Salt MarshMAEIVLIYALNHGVWKMTDEGIPQICLSVPVEKEDGTSETFQGCTAVPEEILYKWLSDTTIKT
Ga0181584_1015655943300017949Salt MarshMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVESSDGTSETFQGCTPVPEEILLEWLRTTYKQV
Ga0181607_1006025213300017950Salt MarshVSLSELVLIYALNHSVWKMTEEGVPQICLSVPVEKEDGTSETFQGCTAVPEEILYKWLSDTTIKT
Ga0181607_1006478113300017950Salt MarshMSMAEIVLIYALNHGVWKMTDEGIPQICLSVPVEKEDGTSETFQGCTAVPEEILYKW
Ga0181607_1007762823300017950Salt MarshMSMAELVLIYALNHGVWKMTEEGVPQICLSVPVESSEGKTENFQGCTPVPEEILLEWLRTTYKQV
Ga0181607_1023241823300017950Salt MarshMSMAELVLIYALNNGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTPVPEEILLEWLRTNYKEV
Ga0181607_1041300123300017950Salt MarshMSMAEMVLIYALNHGVWKMTDEGIPQICLSVPVEKEDGTSETFQGCTAVPEEILYKWLSDTTIKT
Ga0181583_1001460753300017952Salt MarshMSMAELVLIYALNNAVWKMTEEGVPQICLSVPTESSDGKPETFQGCTTVPDEILHRWLSETTIKV
Ga0181583_1071553623300017952Salt MarshMAEMVLIYALNNGVWKMTEDNVPQICLSVPVEENETFQGCTAVPEEILLEWLKHATIKA
Ga0181580_1028284723300017956Salt MarshMSMAELVLIYALNHGVWKMTDEGTPQICLSVPVEAPDGTSENFQGCTPVPEEILLEWLRTTYKQV
Ga0181582_1038863523300017958Salt MarshMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVESSEGKTETFQGCTPVPEEILLEWLRTTYKQV
Ga0181581_1019626633300017962Salt MarshMSMAELVLIYALNNAVWKMTEEGVPQICLSVPTESSDGKPETFQGCTAVPDEILHRWLSETTIKV
Ga0181581_1044839533300017962Salt MarshVSLSELVLIYALNHGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTAVPEEVLLEWLRLTYKEV
Ga0181589_10007865103300017964Salt MarshVSLSELVLIYALNHGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTAVPEEVLLEWLRTNYKEV
Ga0181590_1103176133300017967Salt MarshVGLNELILIYAMNHGVWKMNEEGVPQICMSVPVEAPDGTSENFQGCTAVPEEVLLEW
Ga0181587_1070895433300017968Salt MarshMSMAELVLIYALNHGVWKMTDEGTPQICLSVPVEAPDGTSENFQGCTPVPEEILLEWLRVTYKQV
Ga0181600_1002707473300018036Salt MarshMSMAEIVLIYALNHGVWKMTDEGIPQICLSVPVEKEDGTSETFQGCTAVPEEILYKWLSDTTIKT
Ga0181600_1006719643300018036Salt MarshMSVAELVLIYALNHGVWKMTEEGVPQICLSVPVESSEGKTENFQGCTPVPEEILLEWLRTTYKQV
Ga0181600_1019080943300018036Salt MarshMSMAELVLIYALNNGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTPVPEEILLEWLRTTYKQV
Ga0181601_1025945013300018041Salt MarshYAMNHGVWKMTDEGVPQICLSVPVEAPDGTSENFQGCTAVPEEILLEWLRLTYKEV
Ga0181601_1029979933300018041Salt MarshMSMAEIVLIYALNHGVWKMTDEGIPQICLSVPVEKEDGTLETFQGCTAVPEEILYKWLSDTTIKT
Ga0181601_1043493033300018041Salt MarshVSLSELVLIYALNHSVWKMTEEGVPQICLSVPVEKEDGTSETFQGCTAVPEEILYKWLSDTTIK
Ga0181606_1016924013300018048Salt MarshMSMAEMVLIYALNHGVWKMTDEGIPQICLSVPVEKEDGTSETFQGCTAVPEEILYKWL
Ga0181606_1045120523300018048Salt MarshMSMAEIVLIYALNHGVWKMTDEGIPQICLSVPVEKEDGTSETFQGCTAVPEEILYKWLSDTTIKV
Ga0180433_1098961533300018080Hypersaline Lake SedimentMSMAEIVLIYALNNAVWKMTEDNVPQICLSVPVETPEGKTENFQGCTAAPEEVLLE
Ga0181592_1074192613300018421Salt MarshVSLSELVLIYALNHGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTAVPEEILLEWL
Ga0181592_1074201923300018421Salt MarshMAELVLIYALNHGVWKMTDEGVPQICLSVPVESSDGTSETFQGCTPVPEEILLEWLRVTYKQV
Ga0181592_1100701733300018421Salt MarshMSMAELVLIYALNHGVWKMTDEGVPQICLSVPTESSEGKPETFQGCTAVPEEILLEWLRL
Ga0181592_1104957913300018421Salt MarshVGLNELILIYAMNHGVWKMNDEGVPQICMSVPVEAPDGTSENFQGCTPVPEEILLEWLR
Ga0181593_1095011223300018423Salt MarshMSMAELVLIYALNNAVWKMTEEGVPQICLIDPTESSDGKPETFQGCTAVPDEILHRWLSETTIKV
Ga0181591_1074628013300018424Salt MarshGIWYWYCRVDEAMSIAELVLIYALNHGVWKMTEEGVPQICLSVPVEKEDGTSETFQGCTAVPEEILYKWLSDTTIKT
Ga0182073_140132923300019274Salt MarshMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVESSDGTSETFQGCTPVPEEILLEWLRVTYKQV
Ga0182081_121384213300019277Salt MarshMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVESSEGKTENFQGCTAVPEEILLEWLRTTYKQV
Ga0194024_102057743300019765FreshwaterMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVEAPEGTSETFQGCTKVPEEILLEWLRTNYKQV
Ga0194024_115848913300019765FreshwaterMSMAEIVLIYALNHGVWKMTDEGIPQICLSVPVEKEDGKSETFQGCTAVPEEI
Ga0194022_103723823300019937FreshwaterMSMAELVLIYALNHGVWKMTEEGVPQICLSVPVEAPDGTTENFQGCTAVPEEILLEWLRTTYKQV
Ga0182086_127555013300020013Salt MarshMSMAEIVLIYALNHGVWKMTDEGIPQICLSVPVEKEDGTSETFQGCTAVPEEILYKWLS
Ga0181599_119937213300020178Salt MarshMSMAELVLIYALNNGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTPVPEEIL
Ga0213858_1001312973300021356SeawaterMAELVLIYALNHGVWKMTDEGVPQICLSVPVEAPDGTSENFQGCTPVPEEILLEWLRTTYKQV
Ga0213866_1007803913300021425SeawaterMSMAEMVLIYALNHGVWKMTEDNVPQICLSVPVEAPDGTSETFQGCTAVPEEMLL
Ga0222715_1033093813300021960Estuarine WaterMAELVLIYALNNGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTAVPEEVLLEWLRTNYKEV
Ga0222719_1002674633300021964Estuarine WaterMVLIYALNHGVWKMTDEGVPQICLSVPVESSEGKTETFQGCTAVPEEMLLEWLKTAYVKV
Ga0212020_108585323300022167AqueousVSVAEMVLIYALNNGVWKMTADGVPQICLSVPVESSEGKTETFQGCTAVPEEMLLEWLNTAYVKV
Ga0196899_100017553300022187AqueousMVLIYALNNGVWKMTADGVPQICLSVPVESSEGKTETFQGCTAVPEEMLLEWLNTAYVKV
Ga0196899_105099123300022187AqueousMSMAEMVLIYALNNGVWKMTEEGVPQICLSVPTESSDGKPETFQGCTAVPDEILYRWLSETTIKV
Ga0196901_103465743300022200AqueousVSVAELVLIYALNHGVWKMTEEGVPQICLSVPVKENETFQGCTAVPEEILLEWLRTATIK
Ga0196901_114496623300022200AqueousMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVETPEGKTENFQGCTAVPEEVLLEWLRTTYTKV
Ga0255751_1023235643300023116Salt MarshMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVEAPDGTSETFQGCTPVPEEILLEWLRTTYKQV
Ga0255751_1030728513300023116Salt MarshMSMAELVLIYALNHGVWKMTDEGVPQICLSVPVESSEGKTENFQGCTAVPEEILLEWLRTTY
Ga0208004_102725343300025630AqueousMSMAELVLIYALNHGVWKMNDEGVPQICMSVPVEAPDGTSENFQGCTAVPEEILLEWLRTTYKQV
Ga0208019_1000765143300025687AqueousVSVAELVLIYALNNGVWKMTEEGVPQICLSVPVKENETFQGCTAVPEEILLEWLRTATIK
Ga0208019_100178393300025687AqueousVSVAELVLIYALNHGVWKMTEEGVPQICLSVPVETPEGKTENFQGCTAVPEEVLLEWLRTTYTKV
Ga0208644_127015623300025889AqueousVGLNELILIYAMNHGVWKMNDEGVPQICMSVPVEAPDGTSENFQGCTAVPEEILLEWLRTTYKQV
Ga0209692_1007560053300027828Marine SedimentMSMAELVLIYALNHGVWKMTEEGVPQICLSVPVEAPDGTSENFQGCTPVPEEILLEWLRTTYKEV
Ga0348335_081299_757_9693300034374AqueousVDETIMSMAEMVLIYALNNGVWKMTEEGVPQICLSVPTESSDGKPETFQGCTAVPDEILYRWLSETTIKV


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