Metagenome Family F104236

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F104236
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	91 residues
Representative Sequence	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAAGDGAGPGPRVPEPREPADQSASSAARIAELTREVHELRTTVARLRGSAVPGLARSG
Number of Associated Samples	65
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.39 %
% of genes near scaffold ends (potentially truncated)	40.00 %
% of genes from short scaffolds (< 2000 bps)	87.00 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (65.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (51.000 % of family members)
Environment Ontology (ENVO)	Unclassified (62.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.62% β-sheet: 0.00% Coil/Unstructured: 56.38%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF02518	HATPase_c	12.00
PF13450	NAD_binding_8	10.00
PF17189	Glyco_hydro_30C	3.00
PF01593	Amino_oxidase	2.00
PF00486	Trans_reg_C	2.00
PF12680	SnoaL_2	2.00
PF01557	FAA_hydrolase	1.00
PF05593	RHS_repeat	1.00
PF13556	HTH_30	1.00
PF01425	Amidase	1.00
PF02055	Glyco_hydro_30	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	1.00
COG3209	Uncharacterized conserved protein RhaS, contains 28 RHS repeats	General function prediction only [R]	1.00
COG5520	O-Glycosyl hydrolase	Cell wall/membrane/envelope biogenesis [M]	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.00 %
Unclassified	root	N/A	35.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	54.00 %
Unclassified	root	N/A	35.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.00 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	52.00 %
Unclassified	root	N/A	35.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.00 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.00 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	49.00 %
Unclassified	root	N/A	35.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.00 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.00 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	6.00 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	6.00 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	1.00 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1.00 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	1.00 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	6.00 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	6.00 %
Synechococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae	1.00 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	1.00 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.00 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	1.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	6.00 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	6.00 %
Mesorhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium japonicum	1.00 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	1.00 %
Flavobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae	1.00 %
Synechococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	1.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	6.00 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	6.00 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	1.00 %
unclassified Synechococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus	1.00 %
Aquimarina	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aquimarina	1.00 %
Mesorhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium japonicum	1.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.00 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	6.00 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	6.00 %
Aquimarina atlantica	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aquimarina → Aquimarina atlantica	1.00 %
Synechococcus sp. PCC 7336	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. PCC 7336	1.00 %
Rhizobium leguminosarum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	1.00 %
Mesorhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium japonicum	1.00 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_100604994	All Organisms → cellular organisms → Bacteria	1718	Open in IMG/M
3300005332\|Ga0066388_101141532	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300005332\|Ga0066388_104339459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. PCC 7336	723	Open in IMG/M
3300005332\|Ga0066388_104466517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium leguminosarum	713	Open in IMG/M
3300005332\|Ga0066388_104583346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium japonicum	704	Open in IMG/M
3300005332\|Ga0066388_106408902	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Aquimarina → Aquimarina atlantica	593	Open in IMG/M
3300005435\|Ga0070714_100265372	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300005436\|Ga0070713_100011018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6563	Open in IMG/M
3300005764\|Ga0066903_100464642	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300005764\|Ga0066903_100485453	All Organisms → cellular organisms → Bacteria	2085	Open in IMG/M
3300005764\|Ga0066903_100664076	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300005764\|Ga0066903_101102578	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300009792\|Ga0126374_10410318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	950	Open in IMG/M
3300010043\|Ga0126380_11291984	Not Available	634	Open in IMG/M
3300010048\|Ga0126373_11267032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	803	Open in IMG/M
3300010048\|Ga0126373_11611664	Not Available	714	Open in IMG/M
3300010048\|Ga0126373_12089916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300010048\|Ga0126373_13168872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	512	Open in IMG/M
3300010358\|Ga0126370_10556666	Not Available	981	Open in IMG/M
3300010358\|Ga0126370_10943770	Not Available	783	Open in IMG/M
3300010361\|Ga0126378_11006543	Not Available	937	Open in IMG/M
3300010361\|Ga0126378_11724068	Not Available	712	Open in IMG/M
3300010361\|Ga0126378_12298346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300010361\|Ga0126378_13124574	Not Available	527	Open in IMG/M
3300010376\|Ga0126381_100480585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1748	Open in IMG/M
3300010376\|Ga0126381_101177495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1108	Open in IMG/M
3300010376\|Ga0126381_103116069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300010398\|Ga0126383_10002877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11247	Open in IMG/M
3300016270\|Ga0182036_11836086	Not Available	513	Open in IMG/M
3300016294\|Ga0182041_10891603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	799	Open in IMG/M
3300016387\|Ga0182040_11314618	Not Available	611	Open in IMG/M
3300016422\|Ga0182039_10296761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1337	Open in IMG/M
3300020581\|Ga0210399_11229314	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300021478\|Ga0210402_11580831	Not Available	583	Open in IMG/M
3300021560\|Ga0126371_10027507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	5293	Open in IMG/M
3300021560\|Ga0126371_10449109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1435	Open in IMG/M
3300021560\|Ga0126371_10802514	Not Available	1087	Open in IMG/M
3300021560\|Ga0126371_10908810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1024	Open in IMG/M
3300021560\|Ga0126371_11049439	Not Available	955	Open in IMG/M
3300021560\|Ga0126371_11898585	Not Available	715	Open in IMG/M
3300021560\|Ga0126371_11990278	Not Available	699	Open in IMG/M
3300031543\|Ga0318516_10046258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2357	Open in IMG/M
3300031544\|Ga0318534_10012110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	4370	Open in IMG/M
3300031572\|Ga0318515_10408585	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300031573\|Ga0310915_10918426	Not Available	613	Open in IMG/M
3300031640\|Ga0318555_10079223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1709	Open in IMG/M
3300031640\|Ga0318555_10273818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	913	Open in IMG/M
3300031679\|Ga0318561_10054869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2005	Open in IMG/M
3300031680\|Ga0318574_10245307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1035	Open in IMG/M
3300031680\|Ga0318574_10270988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	984	Open in IMG/M
3300031681\|Ga0318572_10148896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1351	Open in IMG/M
3300031681\|Ga0318572_10201238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1163	Open in IMG/M
3300031719\|Ga0306917_10043635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2975	Open in IMG/M
3300031723\|Ga0318493_10040412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2166	Open in IMG/M
3300031724\|Ga0318500_10333417	Not Available	747	Open in IMG/M
3300031744\|Ga0306918_10617707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	849	Open in IMG/M
3300031764\|Ga0318535_10561440	Not Available	506	Open in IMG/M
3300031765\|Ga0318554_10164323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1262	Open in IMG/M
3300031768\|Ga0318509_10192189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1134	Open in IMG/M
3300031770\|Ga0318521_10369247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	852	Open in IMG/M
3300031771\|Ga0318546_10801857	Not Available	663	Open in IMG/M
3300031778\|Ga0318498_10239314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	820	Open in IMG/M
3300031781\|Ga0318547_10462762	Not Available	782	Open in IMG/M
3300031782\|Ga0318552_10246001	Not Available	907	Open in IMG/M
3300031792\|Ga0318529_10072433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1522	Open in IMG/M
3300031794\|Ga0318503_10024197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1738	Open in IMG/M
3300031798\|Ga0318523_10437640	Not Available	649	Open in IMG/M
3300031799\|Ga0318565_10234954	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	891	Open in IMG/M
3300031805\|Ga0318497_10174345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1183	Open in IMG/M
3300031805\|Ga0318497_10375293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	795	Open in IMG/M
3300031819\|Ga0318568_10490976	Not Available	766	Open in IMG/M
3300031831\|Ga0318564_10200670	Not Available	888	Open in IMG/M
3300031835\|Ga0318517_10143871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1064	Open in IMG/M
3300031835\|Ga0318517_10156559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1020	Open in IMG/M
3300031846\|Ga0318512_10545231	Not Available	590	Open in IMG/M
3300031879\|Ga0306919_10406405	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1045	Open in IMG/M
3300031897\|Ga0318520_10136497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1410	Open in IMG/M
3300031910\|Ga0306923_10544375	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1309	Open in IMG/M
3300031910\|Ga0306923_11037777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	888	Open in IMG/M
3300031912\|Ga0306921_10180017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2478	Open in IMG/M
3300031912\|Ga0306921_10749700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1119	Open in IMG/M
3300032009\|Ga0318563_10342918	Not Available	808	Open in IMG/M
3300032010\|Ga0318569_10463817	Not Available	591	Open in IMG/M
3300032039\|Ga0318559_10130908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1131	Open in IMG/M
3300032043\|Ga0318556_10374432	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	745	Open in IMG/M
3300032043\|Ga0318556_10732507	Not Available	514	Open in IMG/M
3300032054\|Ga0318570_10147759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1050	Open in IMG/M
3300032054\|Ga0318570_10311627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	716	Open in IMG/M
3300032054\|Ga0318570_10473857	Not Available	571	Open in IMG/M
3300032060\|Ga0318505_10272376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	798	Open in IMG/M
3300032063\|Ga0318504_10041054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1899	Open in IMG/M
3300032068\|Ga0318553_10557963	Not Available	600	Open in IMG/M
3300032068\|Ga0318553_10738346	Not Available	515	Open in IMG/M
3300032076\|Ga0306924_10802518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1049	Open in IMG/M
3300032089\|Ga0318525_10408550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	696	Open in IMG/M
3300032180\|Ga0307471_102560488	Not Available	646	Open in IMG/M
3300032261\|Ga0306920_100961586	Not Available	1246	Open in IMG/M
3300033290\|Ga0318519_11012192	Not Available	516	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	88.00%
Loam	Environmental → Terrestrial → Soil → Loam	12.00%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	51.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	23.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.00%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1006049941	3300005332	Tropical Forest Soil	PLDSLYREVARIREIAERSGVASARPGPRIPEPREPADHSARSAARIAELTREVHELRATVARLRGSAVPGLARSG*
Ga0066388_1011415323	3300005332	Tropical Forest Soil	PYCGCPRESPLDSLYREVARIREIAERSGVASDSARRGPGVPEPRESADHSARSAARIVELTREVHELRATVARLRGSAVPGLARSG*
Ga0066388_1043394591	3300005332	Tropical Forest Soil	CPYCGCPRESPLDSLYREVARIREIAERSGAVGDSARPGPRVPEPREPADQGASSAARIAELTREVHELRATVARLRGSAVPGLARSG*
Ga0066388_1044665171	3300005332	Tropical Forest Soil	MTEPACCPYCGCPRESPLDLLYREVARIREIAERRDVASDSAQPGPRVPEPREPADQSARSAAQIAELTREVHELRATVARLRGSTVRPPASRKSGSDGGKSRPGQLRLSA*
Ga0066388_1045833461	3300005332	Tropical Forest Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAESRDGGPSVRAVAATGAGDQSAHSAARIAELTREVHELRATVARLRGSAIPGLARSA*
Ga0066388_1064089021	3300005332	Tropical Forest Soil	ESPLDSLYREVARIREIAERSGVASDSARSGPRVPEPREPADQSALNAARIAELTREVHELRATVARLRGSAVPGLARSG*
Ga0070714_1002653722	3300005435	Agricultural Soil	RAHPLAPGSVDRNPGVGMTEPACCPYCGCPRESPLDSLYREVARIREIAERSGMASDSARPDPRVPEPREPADQGAGSAARIAELTREVHELRATVARLRGSAVPA*
Ga0070713_1000110182	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAVGDSARPGPRVPEPREPADQGAGSAARIAELTREVHELRATVARLRGSAVPA*
Ga0066903_1004646421	3300005764	Tropical Forest Soil	RESPLDSLYREVARIREIAERSGVASARPGPRIPEPREPADHSARSAARIAELTREVHELRATVARLRGSAVPGLARSG*
Ga0066903_1004854534	3300005764	Tropical Forest Soil	MTEPARCPYCGCPRESPLDSLYREVARIREIAERSGVASDSARRGPGVPEPRESADHSARSAARIVELTREVHELRATVARLRGSAVPGLARSG*
Ga0066903_1006640762	3300005764	Tropical Forest Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSVGDSARPAPRVPEPREPADQGAGSASQSAGSATRNAGSAARIAELTHEVDELRATVARLRGSAVPGLARSG*
Ga0066903_1011025782	3300005764	Tropical Forest Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGVASDSARSGPRVQEPREPADQSALNAARIAELTREVHELRATVARLRGSAVPGLARSG*
Ga0126374_104103181	3300009792	Tropical Forest Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGVASDSARSGPRVPEPREPADQSALNAARIAELTREVHELRATVARLRGS
Ga0126380_112919841	3300010043	Tropical Forest Soil	MTEPARCPYCGCPRESPLDSLYREVARIREIAERSGVASARPGPRIPEPREPADHSARSAARIAELTREVHELRATVARLRGSAVPGLARSG*
Ga0126373_112670321	3300010048	Tropical Forest Soil	PRESPLDSLYREVARIREIAERSVGDSARPAPRVPEPREPADQGAGSAARIAELTREVHELRATVARLRGSAVPA*
Ga0126373_116116642	3300010048	Tropical Forest Soil	MTDATCCPYCGRPGDSALESLYREVARIREIAEGRDGGQSARPVARTAAPADAGDQSAHSAARIAELTREVHELRATVARLRGSAVPSLARSG*
Ga0126373_120899162	3300010048	Tropical Forest Soil	MTELARCPYCGCPRESPLDSLYREVARIREIAERSGAVGDSARPGPQVPEPREPQDQGASSAARIAELTREVHELRAT
Ga0126373_131688721	3300010048	Tropical Forest Soil	GVGMTELSHCPYCGCPRESPLDSLYREVARIREIAERSGAVGDSARPGPRVPEPREAAEQSASSAARIAELTREVHELRATVARLRGSALPGLARSG*
Ga0126370_105566661	3300010358	Tropical Forest Soil	PLDSLYREVARIREIAERSGVASARPGPRVPEPREPADQSARSAARIAELTREVHELRATVARLRGSAVRGLARSG*
Ga0126370_109437701	3300010358	Tropical Forest Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGVASDSARSGPRVPEPREPADQSALNAARIAELTREVHELRATVARLRGSAVPGLARSG*
Ga0126378_110065431	3300010361	Tropical Forest Soil	MTELARCPYCGCPRESPLDSLYREVARIREIAERSGAVGDSARPGPQVPEPREPQDQGASSAARIAELTREVHELRATVARLRGSAVLA*
Ga0126378_117240681	3300010361	Tropical Forest Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGVASDSARSGPRVPEPREPADQSALSAARIAELTREVHELRATVARLRGSAVPGLARSG*
Ga0126378_122983461	3300010361	Tropical Forest Soil	MTDATRCPHCGRPGDSVLESLYREVARIREIAESRDGGQNARPAPRALAAADAGDQSAHSAARIAELTREVHELRATVARLRGSAVPGLARSA
Ga0126378_131245741	3300010361	Tropical Forest Soil	MTDATRCPHCGRPGDSTLESLYREVARIREIAENRDGGQNARPAPRAVAAADVGDQSAHSAARIAELTREVHELRATVARLRGSAVPGLARSA*
Ga0126381_1004805852	3300010376	Tropical Forest Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSVGDSARPAPRVPEPREPADQGAGSAARIAELTREVHELRATVARLRGSALPGLAHSA*
Ga0126381_1011774952	3300010376	Tropical Forest Soil	MTDATRCPHCGRPGDSALESLYREVARIREIAESRNGGQNARPAPRAVAATDAGDQSAHSAARIAELTREVNELRVTVARLRGSAVPGLARSA*
Ga0126381_1031160691	3300010376	Tropical Forest Soil	MTELSHCPYCGCPRESPLDSLYREVARIREIAERSGAVGDSARPGPRVPEPREAAEQSASSAARIAELTREVHELRATVARLRGSALPGLARSG*
Ga0126383_100028774	3300010398	Tropical Forest Soil	MTEPARCPYCGCPRESPLDSLYREVARIREIAERSGVASDSARPGARVPEPREPADHSARSAARIAELTREVHELRATVARLRGSAVPGLARSG*
Ga0182036_118360861	3300016270	Soil	MTELARCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGARPGPQVPEPRDPADQGASSAARIAELTREVHELR
Ga0182041_108916032	3300016294	Soil	DSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0182040_113146181	3300016387	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGAGPGSRVPEPREPAEQSASSAARIAELTREVHELRTTVARLRGAALPAPARSA
Ga0182039_102967611	3300016422	Soil	SPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0210399_112293142	3300020581	Soil	MTEPARCPYCGCPRESPLDSLYREVARIREIAERTGVASDCARPGPRVPEPREPADQNAGSAARIAELTREVHELRATVARLRGSAVPGLARSG
Ga0210402_115808311	3300021478	Soil	MTEPACCPYCGCPRESPLDSVYREVARIREIAERRGAVGGSAGPGPRVPEPREPADQSASSAARIAELTREVHELRTTVARLRGSALPGLARSG
Ga0126371_100275071	3300021560	Tropical Forest Soil	PRESPLDSLYREVARIREIAERSGVASARPGPRIPEPREPADHSARSAARIAELTREVHELRATVARLRGSAVPGLARSG
Ga0126371_104491091	3300021560	Tropical Forest Soil	MTELARCPYCGCPGESPLDSLYREVARIREIAERSGAAGDSARPGPRVPEPREAADQGASSVARIAELTREVHELRATVARLRGSAVPGLARSG
Ga0126371_108025142	3300021560	Tropical Forest Soil	MTEPACCPYCGCPRESSLDALYREVARIREIAERSAAVGEDAGPGPRVPVPREPAEQSAGSAARIAELTREVHELRTTVARLRGSAVPGLARSS
Ga0126371_109088101	3300021560	Tropical Forest Soil	MTDATRCPHCGRPGDSALESLYREVARIREIAESRDGGQNARPAPRAVAAADVGDQSAHSAARIAELTREVHELRATVARLRGSAIPGLARSA
Ga0126371_110494392	3300021560	Tropical Forest Soil	MTELARCPYCGCPRESPLDSLYREVARIREIAERSGAVGDSARPGPQVPEPREPGDQGAGSAARIAELTREVHELRATVARLRGSALPGLAHSG
Ga0126371_118985851	3300021560	Tropical Forest Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGVASDSARSGPRVQEPREPADQSALNAARIAELTREVHELRATVARLRGSAVPGLARSG
Ga0126371_119902782	3300021560	Tropical Forest Soil	MTETTCCPYCGCPRESPLDSLYREVARIREIAERSGAGTGARPVPRTVDTGEPADQGVRSAARIAELTREVHELRVTVARLRGSAVPGLTRSG
Ga0318516_100462582	3300031543	Soil	MTETTCCPYCGCPRESPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0318534_100121104	3300031544	Soil	MTETTCCPYCGCPGESPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0318515_104085852	3300031572	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAAGDGAGPGPRVPEPREPADQSASSAARIAELTREVHELRTTVARLRGAALPAP
Ga0310915_109184261	3300031573	Soil	MTETTCCPYCGCPGESPLDSLYREVARIREIAERSGASDGARPVRRAEDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0318555_100792232	3300031640	Soil	MTETTCCPYCGCPRENPLDSLYREVARIREIAERSGASDGARPVPRAVDTGEPAEQGARITELTREVYELRATVARLRGSAVPGLARSG
Ga0318555_102738181	3300031640	Soil	MTDATRCPHCGRPGDSPLESLYREVARIREIAESRDGGQNARPVPRAVAAMDAGDQSAQSAARIAELTREVHELRATVARLRGSAVPGLARSA
Ga0318561_100548691	3300031679	Soil	MTETTCCPYCGCPGESPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLAGSR
Ga0318574_102453072	3300031680	Soil	MTETTCCPYCGCPGESPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLR
Ga0318574_102709881	3300031680	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAAGDGAGPGPRVPEPREPADQSASSAARIAELTREVHELRTTVARLRGSAVPGLARSG
Ga0318572_101488962	3300031681	Soil	MTETTCCPYCGCPGESPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHE
Ga0318572_102012381	3300031681	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGAGPGPRVPEPRDPAEQSPSSAARIAELTREVHELRTTVARLRGSSLPGLARSA
Ga0306917_100436352	3300031719	Soil	MTELARCPYCGCPRESPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0318493_100404122	3300031723	Soil	MTETTCCPYCGCPGESPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSG
Ga0318500_103334171	3300031724	Soil	MTETTCCPYCGCPRENPLDSLYREVARIREIAERSGASDGARPVPRAVDTGEPAEQGARIAELTREVYELRATVARLRGSAVPGLARSG
Ga0306918_106177071	3300031744	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAAGDGAGPGPRVPEPREPADQSASSAARIAELTREVHELRTTVARLRGSALPGLARSS
Ga0318502_106003841	3300031747	Soil	MDLGYNSLSVGCHRAYGARMTDVTCCPHCGRPGESVLDSLYREVARIRELAESRDGGQGTRPAAWAVAVNEAGDQSARSAAQIAQLTREVHELRATVARLRGAAVVGLAHSS
Ga0318535_105614401	3300031764	Soil	MTETTCCPYCGCPRENPLDSLYREVARIREIAERSGASDGARPVRRAVEAGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0318554_101643231	3300031765	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGAGPGSRVPEPREPAEQSASSAARIAELTREVHELRTTVARLRGSAVPGLAHSG
Ga0318509_101921892	3300031768	Soil	LYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0318521_103692471	3300031770	Soil	MTETTCCPYCGCPGESPLDSLYREVARIREIAERSGASDGARPVPRAVDTGEPAEQGARIAELTREVHELRATVARLRGSAVPGLARSG
Ga0318521_110493891	3300031770	Soil	VHMDLGYNSLSVGCHRAYGARMTDVTCCPHCGRPGESVLDSLYREVARIRELAESRDGGQGTRPAAWAVAVNEAGDQSARSAAQIAQLTREVHELRATVARLRGAAVVGLAHSS
Ga0318546_108018571	3300031771	Soil	PKESPLESLYREVARIREIAERQGTSGERALAAPQIAAAREPGDQSARSAARIDELTREVHELRTTVARLRGSAVPWDGGWPAPHASVSA
Ga0318498_102393141	3300031778	Soil	MTETTCCPYCGCPRENPLDSLYREVARIREIAERSGASDGARPVRRAEDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLAGSR
Ga0318547_104627621	3300031781	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGAGPGSRVPEPREPAEQSASSAARIAELTREVHELRTTVARLRGSAVPGLARSG
Ga0318552_102460012	3300031782	Soil	VGMTETTCCPYCGCPRENPLDSLYREVARIREIAERSGASDGARPVPRAVDTGEPAEQGARIAELTREVYELRATVARLRGSAVPGLARSG
Ga0318529_100724332	3300031792	Soil	MTETTCCPYCGCPGESPLDSLYREVARIREIAERSGASDGARPVRRAVEAGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0318503_100241972	3300031794	Soil	MTETTCCPYCGCPRENPLDSLYREVARIREIAERSGASDGARPVPRAVDTGEPAEQGARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0318523_104376401	3300031798	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGAGPGSRVPEPREPAEQSASSAARIAELTREVHELRATVARLRGSAVSGLARSG
Ga0318565_102349542	3300031799	Soil	MTETTCCPYCGCPGESPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVP
Ga0318497_101743451	3300031805	Soil	MTETTCCPYCGCPGESPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGL
Ga0318497_103752932	3300031805	Soil	MTDATRCPYCGHPGDSALESLYREVARIREIAESRDGGQSARPVARTAAPADAGDQSAHSAARIAELTREVHELRATVARLRGSAVPGLARSA
Ga0318568_104909761	3300031819	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGAGPGSRVPEPREPAEQSESSAARIAELTREVHELRTTVARLRGSAVPGL
Ga0318564_102006702	3300031831	Soil	MTETTCCPYCGCPRENPLDSLYREVARIREIAERSGASDGARPVPRAVDTGEPAEQGARIAELTREVHELRATVARLRGSAVPGLARSG
Ga0318517_101438711	3300031835	Soil	MTETTCCPYCGCPGESPLDSLYREVARIRELAERSGASDGARPVPRAVDTGEPAEQGARIAELTREVHELRATVARLRGSAVPGLARSG
Ga0318517_101565592	3300031835	Soil	REVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0318512_105452311	3300031846	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGARPGPQVPEPRDPADQGASSAARIAELTREVHELRTTVARLRGSAVSGLARSG
Ga0306919_104064051	3300031879	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAAGDGAGPGPRVPEPREPADQSASSAARIAELTREVHELRTTVARLRGSAVPGLAHSG
Ga0318520_101364971	3300031897	Soil	MTETTCCPYCGCPGESPLDSLYREVARIREIAERSGASDGARPVPRAVDTGEPAEQGARITELTREVYELRATVARLRGSAVPGLARSG
Ga0306923_105443751	3300031910	Soil	GPGVGMTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAAGDGAGPGPRVPEPREPADQSASSAARIAELTREVHELRTTVARLRGAALPAPARSA
Ga0306923_110377772	3300031910	Soil	ELARCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGARPGPQVPEPRDPADQGASSAARIAELTREVYELRATVARLRGSAVSGLARSG
Ga0306921_101800171	3300031912	Soil	TTCCPYCGCPGESPLDSLYREVARIREIAERSGASDGARPVPRAVDTGEPAEQGARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0306921_107497002	3300031912	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAAGDGAGPGPRVPEPREPADQSASSAARIAELTREVHELRTTVARLRGAALPAPARSA
Ga0318563_103429182	3300032009	Soil	PGESPLDSLYREVARIREIAERSGASDGARPVPRAVDTGEPAEQGARITELTREVYELRATVARLRGSAVPGLARSG
Ga0318569_104638172	3300032010	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGAGPGSRVPEPREPAEQSESSTARIAELTREVHELRTTVARLRGSALPGLARSG
Ga0318559_101309081	3300032039	Soil	MTETTCCPYCGCPRENPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSG
Ga0318556_103744321	3300032043	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGAGPGSRVPEPREPAEQSASSAARIAELTREVHELRTTVARLRGSALPGLARSG
Ga0318556_107325071	3300032043	Soil	PYCGRPGDSALESLYQEVARIREIAESRDGGQSARPVARTAAPADAGDQSAHSAARIAELTREVHELRATVARLRGSAVPGLARSA
Ga0318570_101477592	3300032054	Soil	MTETTCCPYCGCPRENPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLAGSR
Ga0318570_103116271	3300032054	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGAGPGSRVPEPREPAEQSASSAARIAELTREVHELRTTVARLRGSALPGLA
Ga0318570_104738571	3300032054	Soil	TDATRCPYCGHPGDSALESLYREVARIREIAESRDGGQSARPVARTAAPADAGDQSAHSAARIAELTREVHELRATVARLRGSAVPGLARSA
Ga0318505_102723762	3300032060	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAAGDGAGPGPRVPEPREPADQRASSAARIAELTREVHELRTTVARLRGSAVPGLARSS
Ga0318504_100410543	3300032063	Soil	MTETTCCPYCGCPRENPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0318553_105579631	3300032068	Soil	MTEPACCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGAGPGSRVPEPREPAEQSASSAARIAELTREVHELRTTVARLRGSALPGLARSS
Ga0318553_107383461	3300032068	Soil	PGFVDRCPGVGMTELARCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGARPGPQVPEPRDPADQGASSAARIAELTREVHELRTTVARLRGSAVSGLARSG
Ga0306924_108025181	3300032076	Soil	YCGCPGESPLDSLYREVARIREIAERSGASDGARPVRRAVDTGEPADQGARSAARIAELTREVHELRATVARLRGSAVPGLARSR
Ga0318525_104085502	3300032089	Soil	ACCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGAGPGSRVPEPREPAEQSASSAARIAELTREVHELRTTVARLRGSAVPGLARSG
Ga0307471_1025604881	3300032180	Hardwood Forest Soil	MTETTCCPYCGCPRESPLDSLYREVARIREIAERSGAVERARPGPRAVDTGEPADQSARSAARIAELTREVHELRATVARLRGSAVPGLARSG
Ga0306920_1009615862	3300032261	Soil	MTDATRCPYCGRPGDSALESLYQEVARIREIAESRDGGQSARPVARTAAPADAGDQSAHSAARIAELTREVHELRATVARLRGSAVPGLARSA
Ga0318519_110121922	3300033290	Soil	CARRRLSAARTRAHPLAPGFVDRCPGVGMTELARCPYCGCPRESPLDSLYREVARIREIAERSGAVGDGARPGPQVPEPRDPADQGASSAARIAELTREVYELRATVARLRGSAVSGLARSG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104236

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences