NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F104460

Metagenome Family F104460

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F104460
Family Type Metagenome
Number of Sequences 100
Average Sequence Length 48 residues
Representative Sequence LSQQVMIEALYQEIIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Number of Associated Samples 56
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 79.00 %
% of genes near scaffold ends (potentially truncated) 30.00 %
% of genes from short scaffolds (< 2000 bps) 82.00 %
Associated GOLD sequencing projects 54
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (37.000 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater
(24.000 % of family members)
Environment Ontology (ENVO) Unclassified
(57.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(67.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 83.67%    β-sheet: 0.00%    Coil/Unstructured: 16.33%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF09588YqaJ 44.00
PF13392HNH_3 19.00
PF00959Phage_lysozyme 3.00
PF05772NinB 1.00
PF13489Methyltransf_23 1.00
PF007253HCDH 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 1.00

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms63.00 %
UnclassifiedrootN/A37.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300005525|Ga0068877_10470618Not Available699Open in IMG/M
3300005527|Ga0068876_10058343All Organisms → Viruses → Predicted Viral2342Open in IMG/M
3300005527|Ga0068876_10112087All Organisms → Viruses → Predicted Viral1621Open in IMG/M
3300005527|Ga0068876_10143098Not Available1408Open in IMG/M
3300005527|Ga0068876_10269255Not Available973Open in IMG/M
3300005528|Ga0068872_10080474Not Available1975Open in IMG/M
3300005581|Ga0049081_10037537All Organisms → Viruses → Predicted Viral1841Open in IMG/M
3300005581|Ga0049081_10133036Not Available916Open in IMG/M
3300005581|Ga0049081_10221400All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage672Open in IMG/M
3300005662|Ga0078894_10181835All Organisms → Viruses → Predicted Viral1899Open in IMG/M
3300005758|Ga0078117_1093362All Organisms → Viruses → Predicted Viral2687Open in IMG/M
3300005805|Ga0079957_1034004All Organisms → Viruses → Predicted Viral3330Open in IMG/M
3300005805|Ga0079957_1129950All Organisms → Viruses → Predicted Viral1315Open in IMG/M
3300005805|Ga0079957_1286591All Organisms → cellular organisms → Bacteria747Open in IMG/M
3300007973|Ga0105746_1166916All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage746Open in IMG/M
3300008107|Ga0114340_1172156All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage768Open in IMG/M
3300008111|Ga0114344_1146613All Organisms → Viruses → Predicted Viral1275Open in IMG/M
3300008114|Ga0114347_1014952All Organisms → Viruses → Predicted Viral3777Open in IMG/M
3300008116|Ga0114350_1040221All Organisms → Viruses → Predicted Viral1776Open in IMG/M
3300008116|Ga0114350_1070811Not Available1190Open in IMG/M
3300008116|Ga0114350_1096116All Organisms → Viruses → Predicted Viral1578Open in IMG/M
3300008116|Ga0114350_1139990Not Available694Open in IMG/M
3300008120|Ga0114355_1085555All Organisms → Viruses → Predicted Viral2142Open in IMG/M
3300008262|Ga0114337_1188816Not Available852Open in IMG/M
3300008264|Ga0114353_1152613All Organisms → Viruses → Predicted Viral1158Open in IMG/M
3300008264|Ga0114353_1291038All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage686Open in IMG/M
3300008266|Ga0114363_1018827All Organisms → Viruses → Predicted Viral4575Open in IMG/M
3300008266|Ga0114363_1045761All Organisms → Viruses → Predicted Viral1765Open in IMG/M
3300008266|Ga0114363_1051604All Organisms → Viruses → Predicted Viral1634Open in IMG/M
3300008266|Ga0114363_1077057All Organisms → Viruses → Predicted Viral1252Open in IMG/M
3300008266|Ga0114363_1132757All Organisms → cellular organisms → Bacteria → FCB group849Open in IMG/M
3300008267|Ga0114364_1125815All Organisms → cellular organisms → Bacteria → FCB group752Open in IMG/M
3300008267|Ga0114364_1168996Not Available574Open in IMG/M
3300008448|Ga0114876_1036979All Organisms → Viruses → Predicted Viral2326Open in IMG/M
3300008448|Ga0114876_1077995Not Available1385Open in IMG/M
3300008448|Ga0114876_1184947Not Available721Open in IMG/M
3300008450|Ga0114880_1097151Not Available1146Open in IMG/M
3300008450|Ga0114880_1208585All Organisms → cellular organisms → Bacteria → FCB group647Open in IMG/M
3300008450|Ga0114880_1210127All Organisms → cellular organisms → Bacteria → FCB group643Open in IMG/M
3300010354|Ga0129333_10175994All Organisms → cellular organisms → Bacteria → Proteobacteria1955Open in IMG/M
3300010354|Ga0129333_10674527Not Available891Open in IMG/M
3300010354|Ga0129333_10828238Not Available787Open in IMG/M
(restricted) 3300013131|Ga0172373_10651253All Organisms → cellular organisms → Bacteria → FCB group625Open in IMG/M
(restricted) 3300013132|Ga0172372_10151583All Organisms → Viruses → Predicted Viral1834Open in IMG/M
(restricted) 3300013132|Ga0172372_10301628Not Available1140Open in IMG/M
(restricted) 3300014720|Ga0172376_10214130All Organisms → cellular organisms → Bacteria → FCB group1212Open in IMG/M
(restricted) 3300014720|Ga0172376_10686949All Organisms → cellular organisms → Bacteria → FCB group554Open in IMG/M
3300017707|Ga0181363_1021039Not Available1279Open in IMG/M
3300017747|Ga0181352_1042570All Organisms → Viruses → Predicted Viral1340Open in IMG/M
3300017747|Ga0181352_1065597All Organisms → Viruses → Predicted Viral1033Open in IMG/M
3300017747|Ga0181352_1203847Not Available508Open in IMG/M
3300017780|Ga0181346_1032382All Organisms → cellular organisms → Bacteria → Proteobacteria2162Open in IMG/M
3300017785|Ga0181355_1295091Not Available610Open in IMG/M
3300019784|Ga0181359_1122341All Organisms → cellular organisms → Bacteria → FCB group929Open in IMG/M
3300020048|Ga0207193_1493892All Organisms → cellular organisms → Bacteria → FCB group812Open in IMG/M
3300020151|Ga0211736_10026521Not Available1258Open in IMG/M
3300020151|Ga0211736_10026556Not Available1279Open in IMG/M
3300020159|Ga0211734_10459822All Organisms → cellular organisms → Bacteria → Proteobacteria1716Open in IMG/M
3300020161|Ga0211726_10530879Not Available529Open in IMG/M
3300021961|Ga0222714_10090608All Organisms → Viruses → Predicted Viral1964Open in IMG/M
3300022179|Ga0181353_1050290Not Available1092Open in IMG/M
3300022179|Ga0181353_1052860All Organisms → Viruses → Predicted Viral1060Open in IMG/M
3300022190|Ga0181354_1176237All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage653Open in IMG/M
3300024289|Ga0255147_1000102Not Available35523Open in IMG/M
3300027608|Ga0208974_1024502All Organisms → Viruses → Predicted Viral1855Open in IMG/M
3300027697|Ga0209033_1024894All Organisms → cellular organisms → Bacteria → Proteobacteria2373Open in IMG/M
3300027721|Ga0209492_1117726Not Available933Open in IMG/M
3300027764|Ga0209134_10067639All Organisms → Viruses → Predicted Viral1201Open in IMG/M
3300027785|Ga0209246_10109950All Organisms → Viruses → Predicted Viral1081Open in IMG/M
3300027793|Ga0209972_10062366All Organisms → Viruses → Predicted Viral1982Open in IMG/M
3300027816|Ga0209990_10430886All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage568Open in IMG/M
(restricted) 3300027977|Ga0247834_1093356Not Available1372Open in IMG/M
3300028025|Ga0247723_1098126All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage743Open in IMG/M
(restricted) 3300028559|Ga0247831_1161371Not Available877Open in IMG/M
(restricted) 3300028569|Ga0247843_1073242All Organisms → Viruses → Predicted Viral1707Open in IMG/M
3300031758|Ga0315907_10814583All Organisms → cellular organisms → Bacteria → FCB group695Open in IMG/M
3300031758|Ga0315907_10896292Not Available651Open in IMG/M
3300031784|Ga0315899_11590039All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage543Open in IMG/M
3300031787|Ga0315900_10034617Not Available5551Open in IMG/M
3300031787|Ga0315900_10056969All Organisms → Viruses → Predicted Viral4070Open in IMG/M
3300031787|Ga0315900_10115254Not Available2573Open in IMG/M
3300031787|Ga0315900_10168884All Organisms → Viruses → Predicted Viral1990Open in IMG/M
3300031787|Ga0315900_10202693All Organisms → Viruses → Predicted Viral1754Open in IMG/M
3300031787|Ga0315900_10404652All Organisms → Viruses → Predicted Viral1075Open in IMG/M
3300031787|Ga0315900_10613843Not Available792Open in IMG/M
3300031787|Ga0315900_10698148All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage719Open in IMG/M
3300031787|Ga0315900_10947623All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage572Open in IMG/M
3300031857|Ga0315909_10041984All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae4313Open in IMG/M
3300031857|Ga0315909_10048435All Organisms → Viruses → Predicted Viral3954Open in IMG/M
3300031857|Ga0315909_10135349All Organisms → cellular organisms → Bacteria → Proteobacteria2056Open in IMG/M
3300031857|Ga0315909_10353623Not Available1072Open in IMG/M
3300031857|Ga0315909_10594163Not Available741Open in IMG/M
3300031951|Ga0315904_10099350All Organisms → Viruses → Predicted Viral3064Open in IMG/M
3300031951|Ga0315904_10891433All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage719Open in IMG/M
3300031963|Ga0315901_11219493Not Available508Open in IMG/M
3300032093|Ga0315902_10419750Not Available1200Open in IMG/M
3300032116|Ga0315903_10252902All Organisms → Viruses → Predicted Viral1521Open in IMG/M
3300032116|Ga0315903_10595543Not Available850Open in IMG/M
3300032116|Ga0315903_10970846Not Available598Open in IMG/M
3300034106|Ga0335036_0013850Not Available6577Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater24.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake22.00%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton18.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater9.00%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake6.00%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic4.00%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater4.00%
LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake3.00%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient3.00%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.00%
Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Lake Water1.00%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment1.00%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater1.00%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water1.00%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water1.00%
Deep Subsurface SedimentEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface Sediment1.00%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300005525Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaGEnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005528Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaGEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005758Cyanobacteria communities in tropical freswater systems - freshwater lake in SingaporeEnvironmentalOpen in IMG/M
3300005805Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USAEnvironmentalOpen in IMG/M
3300007973Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460A_0.2umEnvironmentalOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008111Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-C-NAEnvironmentalOpen in IMG/M
3300008114Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-C-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008262Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NAEnvironmentalOpen in IMG/M
3300008264Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-53-LTREnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008267Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTREnvironmentalOpen in IMG/M
3300008448Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigsEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300013131 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10mEnvironmentalOpen in IMG/M
3300013132 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5mEnvironmentalOpen in IMG/M
3300014720 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_35mEnvironmentalOpen in IMG/M
3300017707Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MLB.S.NEnvironmentalOpen in IMG/M
3300017747Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.S.NEnvironmentalOpen in IMG/M
3300017780Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300017785Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.D.NEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020048Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915EnvironmentalOpen in IMG/M
3300020151Freshwater lake microbial communities from Lake Erken, Sweden - P4710_202 megahit1EnvironmentalOpen in IMG/M
3300020159Freshwater lake microbial communities from Lake Erken, Sweden - P4710_108 megahit1EnvironmentalOpen in IMG/M
3300020161Freshwater lake microbial communities from Lake Erken, Sweden - P4710_101 megahit1EnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300022179Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.NEnvironmentalOpen in IMG/M
3300022190Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.NEnvironmentalOpen in IMG/M
3300024289Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8hEnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027697Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027721Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027764Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MLB.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027785Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300027793Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027816Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027977 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_12mEnvironmentalOpen in IMG/M
3300028025Subsurface sediment microbial communities from gas well in West Virginia, United States - MSEEL Well Study Marcellus 5H_FCEnvironmentalOpen in IMG/M
3300028559 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_1mEnvironmentalOpen in IMG/M
3300028569 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2017_8mEnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031787Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA114EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032093Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA117EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300034106Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Ga0068877_1047061823300005525Freshwater LakeLSQQVMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKFQLLNNTEDEE*
Ga0068876_1005834333300005527Freshwater LakeVREDGRGLGIQDVGPGDEGLSQQVMIEALYQEIIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE*
Ga0068876_1011208713300005527Freshwater LakeLSQQVMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKFQLLNNTEEDE*
Ga0068876_1014309833300005527Freshwater LakeMGIQDVGSGDEGLSQQVMIEALYQEIVGVLGKFDEALPLASVVGVLEVIKFQLLNNTEEDE*
Ga0068876_1026925523300005527Freshwater LakeMIEALYQEIMGVLEKFDEALPLASVVGVLEVIKFQLLNNTEEDE*
Ga0068872_1008047433300005528Freshwater LakeLSQQVMIEALYQEIVGVLGKFDEALPLASVVGVLEVIKFQLLNNTEEDE*
Ga0049081_1003753763300005581Freshwater LenticMIEALYQEIMGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE*
Ga0049081_1013303633300005581Freshwater LenticLSQQVMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTEEDE*
Ga0049081_1022140013300005581Freshwater LenticYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE*
Ga0078894_1018183543300005662Freshwater LakeLSQQVMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE*
Ga0078117_109336233300005758Lake WaterMIEALYQEIMGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEEE*
Ga0079957_103400453300005805LakeMIEALYQEIVGVVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE*
Ga0079957_112995043300005805LakeMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE*
Ga0079957_128659133300005805LakeAGLSQQVMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDKE*ETDL*
Ga0105746_116691613300007973Estuary WaterQVMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE*
Ga0114340_117215623300008107Freshwater, PlanktonLSQQVMIEALYQEIMGVLEKFDEALPLASVVGVLEVIKFQLLNNTEEDE*
Ga0114344_114661333300008111Freshwater, PlanktonMSQQVMIEGLYKELIGVLEKFDEALPLASVVGVLEVIKYQLLNNTSEDEE*
Ga0114347_101495273300008114Freshwater, PlanktonLSQQVMIEALYQELVGVLGKFDEALPLASVVGVLEVIKYQLLNNTEEDE*
Ga0114350_104022123300008116Freshwater, PlanktonMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTEEDE*
Ga0114350_107081143300008116Freshwater, PlanktonEGLSQQVMIEALYQEIMGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE*
Ga0114350_109611643300008116Freshwater, PlanktonLSQQVMIEALYQEIMGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEEDE*
Ga0114350_113999033300008116Freshwater, PlanktonEGLSQQVMIEALYQEIMGVLEKFDEALPLASVVGVLEGIRYQLLNNTEEDE*
Ga0114355_108555533300008120Freshwater, PlanktonLSQQVMIEALYQEIMGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE*
Ga0114337_118881623300008262Freshwater, PlanktonMSQQVMIEGLYKELIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE*
Ga0114353_115261343300008264Freshwater, PlanktonIQDVGPGDEGLSQQVMIEALYQEIIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE*
Ga0114353_129103843300008264Freshwater, PlanktonIEALYQEIVGAVEKFDEALPLASVVGGLEVIKYQLLMNTEDEE*
Ga0114363_101882793300008266Freshwater, PlanktonLSQQVMIEALYQEIIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE*
Ga0114363_104576143300008266Freshwater, PlanktonLSQQVMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTSEDEE*
Ga0114363_105160453300008266Freshwater, PlanktonLSQQVMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTEDEE*
Ga0114363_107705733300008266Freshwater, PlanktonLSQQVMIEALYQEIVGVLGKFDEALPLASVVGVLEVIKFQLLNNTEDEE*
Ga0114363_113275733300008266Freshwater, PlanktonVSQQVMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEK*
Ga0114364_112581523300008267Freshwater, PlanktonLSQQVMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLINTEDEE*
Ga0114364_116899623300008267Freshwater, PlanktonLSQQVMIEGLYKELIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEDEE*
Ga0114876_103697963300008448Freshwater LakeMIEALYQEIVGVVEKFDEALPLASVVGVLEVIKYQLLMN
Ga0114876_107799523300008448Freshwater LakeMSQQVMIEALYQEIIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE*
Ga0114876_118494733300008448Freshwater LakeMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQL
Ga0114880_109715113300008450Freshwater LakeLYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTEDEE*
Ga0114880_120858513300008450Freshwater LakeMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLMAN
Ga0114880_121012713300008450Freshwater LakeLSQQVMIEALYQEIVGAVEKFDEALPLASVVGVLEVIK
Ga0129333_1017599433300010354Freshwater To Marine Saline GradientLSQQVMIEALYQEIIGVLGKFDEALPLASMVGVLEVIKYQLLNNTEEDE*
Ga0129333_1067452713300010354Freshwater To Marine Saline GradientQQVMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE*
Ga0129333_1082823813300010354Freshwater To Marine Saline GradientMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLM
(restricted) Ga0172373_1065125333300013131FreshwaterMSQQVMIEALYQEIVGVLEKFNDALPVSSVVGILEVIKYQILNNTEEEEE*
(restricted) Ga0172372_1015158323300013132FreshwaterMIEALYQEIVGVLEKFNDALPVSSVVGILEVIKYQILNNTEEEEE*
(restricted) Ga0172372_1030162833300013132FreshwaterMIEALYQEIVGVLEKFNDALPVSSVVGILEVIKYQILNNVEEEEE*
(restricted) Ga0172376_1021413033300014720FreshwaterMIEALYQEIVGVLEKFNDALPVSSVVGILEVIKYQLLNNTEEEEE*
(restricted) Ga0172376_1068694913300014720FreshwaterMSQQVMIEALYQEIVGVLEKFNDALPVSSVVGILEVIKYQL
Ga0181363_102103943300017707Freshwater LakeMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLMANTEDEE
Ga0181352_104257013300017747Freshwater LakeVREDGRGLGIQDFGPGDAGLSQQVMIEALYQEIVGAVEKFDEALPIASVVGVLEVIKYQLLMNTEDEE
Ga0181352_106559733300017747Freshwater LakeVRKDGRGLGIQDPSSGDAGLSQQVMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE
Ga0181352_120384713300017747Freshwater LakeLSQQVMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLMNTEDEE
Ga0181346_103238273300017780Freshwater LakeVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE
Ga0181355_129509123300017785Freshwater LakeMIEALYQEIVGAVEKFDEALPLASVVGVLEVNKYQLLMNTEDEE
Ga0181359_112234133300019784Freshwater LakeLSQQVMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0207193_149389223300020048Freshwater Lake SedimentXXXAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE
Ga0211736_1002652123300020151FreshwaterLSQQVMIEALYQEIIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0211736_1002655623300020151FreshwaterMIEALYQEIIGVLEKFDEALPLASVVGVLEVIKYQLLNNTSEEDE
Ga0211734_1045982233300020159FreshwaterMIEALYQEIMGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0211726_1053087913300020161FreshwaterMIEALYQEIMGVLEKFDEALPLASVVGVLEVIKFQLLNNTEEDE
Ga0222714_1009060833300021961Estuarine WaterMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0181353_105029033300022179Freshwater LakeLSQQVMIEALYQEIMGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0181353_105286033300022179Freshwater LakeLSQQVMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE
Ga0181354_117623743300022190Freshwater LakeELGAGDEGLSQQVMIEALYQEIIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0255147_1000102463300024289FreshwaterMSQQVMIEELTKEIYLAIEKFNEALPLASVVGVLEVIKYELILNIGDDDET
Ga0208974_102450233300027608Freshwater LenticLSQQVMIEALYQEIMGVLEKFDEALPLASVVGVLEVIKFQLLNNTEEDE
Ga0209033_102489413300027697Freshwater LakeYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE
Ga0209492_111772623300027721Freshwater SedimentVREDGRGLGIQDPSPGDAGLSQQVMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE
Ga0209134_1006763943300027764Freshwater LakeDAGLSQQVMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE
Ga0209246_1010995013300027785Freshwater LakeLSQQVMIEALYQEIVGVVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE
Ga0209972_1006236633300027793Freshwater LakeLSQQVMIEALYQEIVGVLGKFDEALPLASVVGVLEVIKFQLLNNTEEDE
Ga0209990_1043088613300027816Freshwater LakeMIEALYQEIVGVLGKFDEALPLASVVGVLEVIKFQLLNNTEEDE
(restricted) Ga0247834_109335643300027977FreshwaterMIEALYQEIIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0247723_109812613300028025Deep Subsurface SedimentALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE
(restricted) Ga0247831_116137143300028559FreshwaterAGDEGLSQQVMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTEEDE
(restricted) Ga0247843_107324243300028569FreshwaterLSQQVMIEALYQEIIGVLGKFDEALPLASVVGVLE
Ga0315907_1081458333300031758FreshwaterLSQQVMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKFQLLNNTEEDE
Ga0315907_1089629223300031758FreshwaterLSQQVMIEALYQEIMGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEEDE
Ga0315899_1159003923300031784FreshwaterLSQQVMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTEDEE
Ga0315900_10034617113300031787FreshwaterMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKFQLLNNTEEDE
Ga0315900_1005696933300031787FreshwaterMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTSEDEE
Ga0315900_1011525443300031787FreshwaterMGIQDVGSGDEGLSQQVMIEALYQEIVGVLGKFDEALPLASVVGVLEVIKFQLLNNTEDE
Ga0315900_1016888443300031787FreshwaterMSQQVMIEGLYKELIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0315900_1020269353300031787FreshwaterMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTEDEE
Ga0315900_1040465233300031787FreshwaterLSQQVMIEALYQEIMGVLEKFDEALPLASVVGVLEV
Ga0315900_1061384323300031787FreshwaterMSQQVMIEALYQEIIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0315900_1069814813300031787FreshwaterSGDEGLSQQVMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0315900_1094762313300031787FreshwaterGDEGLSQQVMIEALYQEIVGVLGKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0315909_1004198413300031857FreshwaterMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMN
Ga0315909_1004843553300031857FreshwaterMIEALYQEIVGVLGKFDEALPLASVVGVLEVIKFQLLNNTEDEE
Ga0315909_1013534973300031857FreshwaterVAVREDGRGLGIQDPSPGDEGLSQQVMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEE
Ga0315909_1035362323300031857FreshwaterMIEALYQELVGVLGKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0315909_1059416313300031857FreshwaterLMSQQVMIEALYQEIIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0315904_1009935053300031951FreshwaterVREDGRGLGIQDVGPGDEGLSQQVMIEALYQEIIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0315904_1089143313300031951FreshwaterEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0315901_1121949333300031963FreshwaterLMSQQVMIEGLYKELIGVLEKFDEALPLASVVGVLEVIKYQLLNNTE
Ga0315902_1041975013300032093FreshwaterEGLSQQVMIEALYQEIIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEEDE
Ga0315903_1025290213300032116FreshwaterLSQQVMIEALYQEIIGVLGKFDEALPLASVVGVLEVIKYQLLNNTSEDEE
Ga0315903_1059554323300032116FreshwaterMSQQVMIEGLYKELIGVLEKFDEALPLASVVGVLEVIKYQLLNNTEDEE
Ga0315903_1097084633300032116FreshwaterVSQQVMIEALYQEIVGAVEKFDEALPLASVVGVLEVIKYQLLMNTEDEK
Ga0335036_0013850_748_8823300034106FreshwaterMIEALYQEIIVVLGKFDEALPLASVVGVLEVIKYQLLNNTEEDE

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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