Metagenome Family F104539

Basic Information
Family ID	F104539
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	71 residues
Representative Sequence	MIHEGLLSERKADTGRALLVQLTAKGNKYREGLIKERRAAEDKLRKELTPGEKSTLIRLLQRVAELEI
Number of Associated Samples	86
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (19.000 % of family members)
Environment Ontology (ENVO)	Unclassified (36.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (74.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.54% β-sheet: 0.00% Coil/Unstructured: 36.46%
Feature Viewer

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Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF06245	DUF1015	11.00
PF07077	DUF1345	7.00
PF00990	GGDEF	7.00
PF05231	MASE1	6.00
PF01740	STAS	4.00
PF00881	Nitroreductase	4.00
PF05694	SBP56	3.00
PF02687	FtsX	3.00
PF14833	NAD_binding_11	2.00
PF12805	FUSC-like	2.00
PF07681	DoxX	2.00
PF07609	DUF1572	2.00
PF04551	GcpE	2.00
PF12704	MacB_PCD	2.00
PF12867	DinB_2	2.00
PF03551	PadR	1.00
PF13463	HTH_27	1.00
PF07676	PD40	1.00
PF00069	Pkinase	1.00
PF01266	DAO	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG4198	Uncharacterized conserved protein, DUF1015 family	Function unknown [S]	11.00
COG4291	Uncharacterized membrane protein	Function unknown [S]	7.00
COG0642	Signal transduction histidine kinase	Signal transduction mechanisms [T]	6.00
COG3447	Integral membrane sensor domain MASE1	Signal transduction mechanisms [T]	6.00
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	6.00
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	4.00
COG0821	4-hydroxy-3-methylbut-2-enyl diphosphate synthase IspG/GcpE	Lipid transport and metabolism [I]	2.00
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	2.00
COG4270	Uncharacterized membrane protein	Function unknown [S]	2.00
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.00
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.00
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.00

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.00%
Aquatic	Environmental → Aquatic	13.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.00%
Freshwater	Environmental → Aquatic → Freshwater	12.00%
Peat	Environmental → Terrestrial → Peat	2.00%
Sediment	Environmental → Aquatic → Sediment	1.00%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.00%
Loam	Environmental → Terrestrial → Soil → Loam	15.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	12.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.00%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.00%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.00%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.00%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.00%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	19.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.00%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	9.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.00%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.00%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.00%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.00%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	2.00%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.00%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.00%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.00%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.00%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.00%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	1.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.00%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001082	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O3	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300003220	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005944	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026217	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300027173	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF036 (SPAdes)	Environmental	Open in IMG/M
3300027288	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC (SPAdes)	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027701	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12664J13189_10061473	3300001082	Forest Soil	ERKADTGRALLVQLTAKGNKYRDGLIKERRAAEDKLRTELTPAQASDLIRLLKRVAELEI
JGI12269J14319_102555432	3300001356	Peatlands Soil	GFDRTVVHRAIKTMIQEGLLSERKAESGRALLVQLTTKGTKYREFLINERRAAEEKLRKALPPKEIATLLRLLKVIADLRI*
JGI12659J15293_100136421	3300001546	Forest Soil	LSERKADTGRALLVQLTAKGNKYRDGLIKERRAAEDKLRTELTPAQASDLIRLLKRVAELEI*
JGIcombinedJ26739_1012446531	3300002245	Forest Soil	SERKADTGRALLVQLTAKGNKYRDGLIKERRAAEDKLRTELTPAQASDLIRLLKRVAELEI*
JGI25381J37097_10184392	3300002557	Grasslands Soil	VLNQNQIATLLGFDRTVVHRVIRTLIQEGLASERRAESGRALLVRLTAKGNKYRERLIKERRAAEEKLREVLTLEEIASLLGLLKVVAELKL*
JGI26342J46808_10273942	3300003220	Bog Forest Soil	GAALNQNQIATMLGFDRTVVHRAIKTMIHEGMLSERKADTGRALLVQLTAKGNRYRERLVKERRAAEDKLRKELTPAQASTLIRLLKQIAELEF*
Ga0062385_109220562	3300004080	Bog Forest Soil	MIHEGLLSERKADTGRALLVQLTAKGNKYREGLIKERRAAEDKLRKELTPGEKSTLIRLLQRVAELEI*
Ga0062389_1006983071	3300004092	Bog Forest Soil	DTGRALLVQLTAKGNKYRDGLVKARRAAEDKLRKELTAGEASTLIGLLQRIAELEL*
Ga0062389_1045331572	3300004092	Bog Forest Soil	LSERKADTGRALLVQLTAKGNKYREGLVKERRAAEEKLRKELTPHEAAALIRLLQRVAELKF*
Ga0066869_100035282	3300005165	Soil	MLGFDRTVVHRAVKTMIHEGLLSERKADIGRALLVQLTAKGNKYRESLIKERRAAEEKLREQLSPTEIATLITLLKRVADLEF*
Ga0066679_107250062	3300005176	Soil	QNQVATLLGFDRTVVHRAIKTMIQEGLASEKRAQSGRALLVRLTAKGNKYRERLIKERRAADEKLLRMLLPVEIATLLRLLKAIAEVKF*
Ga0066671_102752801	3300005184	Soil	AVLNQNQIATLLGFDRTVVHRVIRTLIQEGLASERRAESGRALLVRLTAKGNKYRERLIKERRAAEEKLREVLTLEEIASLLGLLKVVAELKL*
Ga0070730_101417233	3300005537	Surface Soil	GMIKEGLLTERKADSGRALLLHLTAKGNEYRNHLIKERRAVDEKLRKVLKPNEISILIRLLDAAAALEI*
Ga0070731_104832771	3300005538	Surface Soil	ERKADSGRALLLHLTAKGNEYRNHLIKERRAVDEKLRKVLKPNEISVLIRLLDAAAALEI
Ga0066693_100000379	3300005566	Soil	MQEGLASERRAESGRALLVRLTAKGHKYRERLIKERRAAEEKLREVLTLEEIASLLGLLKVVAELKL*
Ga0070761_109960142	3300005591	Soil	RKAETGRALLVQLTKKGNKYRECLIKERRAAEDKLRKELTPAQASTLIQLLKQVAEVEI*
Ga0070764_100458452	3300005712	Soil	RALLVQLTAKGNKYREGLVRERRAAEDKLRKELTAGEAATLIRLLQRIAELEL*
Ga0066903_1014688642	3300005764	Tropical Forest Soil	FDRTVVHRAVKTMIQEGLLSERKAETGRALLVQLTAKGNRYRESLIKERRDAEEKLREQLTSDDTATLIQLLKRVSELEF*
Ga0066788_101288521	3300005944	Soil	DRTVVHRAIKSMIREGLASQKKAKSGKALLIQLTAKGNKYRERLIKERRAAEEKLRTELTSAERPNLLRLLKLVSELKF*
Ga0080026_100710521	3300005952	Permafrost Soil	MLNQNQIATLLGYDRTVVHRSIKTMIREGLLGEKKAVSGRALLVHLTAKGSAYRESQIKERRAADEKLRKKFKPTEISTLLRLLPEIASLEF*
Ga0075015_1003816502	3300006102	Watersheds	HRAIKTMIQEGLLTERKAESGRALLVQITAKGNKYREFLIKERRAAEEKLRKELPPGEIATLLRLLKVIAEVKF*
Ga0099791_100640253	3300007255	Vadose Zone Soil	SERKAESGRALLVQLTAKGNKYREFLIKERRAAEEKLRKELTPDESATLLRLLKVVAEVKF*
Ga0126380_103838222	3300010043	Tropical Forest Soil	TVVHRAVKAMIEEGLLSERKAERGRALLVQLTVKGNKYREFLIKERRALDDQIRKHFNLDEQATLVHLLKRLGELEL*
Ga0126380_118389322	3300010043	Tropical Forest Soil	ETGRALLVQLTAKGSKYREFLIKERRAAEEKLREQLTPDEVDALIHLLKRVAELEF*
Ga0134071_103072062	3300010336	Grasslands Soil	LSERKVESGRALLVQLTAKGNKYREFLIKERRAAEEKVRKELTADESATLLRLLKVVAEVKFS*
Ga0126377_133169082	3300010362	Tropical Forest Soil	GLLSERKAERGRALLVQLTVKGNKYREFLIKERRALDDQIRKHFNLEEQATLVHLLKRLGELEL*
Ga0136449_1002617471	3300010379	Peatlands Soil	TVVHRAIKTMIQEGLLSERKAESGRALLVQLTAKGNKYRERLIKERRAADEELRKLLTPEEMATLLRLLNVIAEVKF*
Ga0137383_101177731	3300012199	Vadose Zone Soil	TLIQEGLASERRAESGRALLVRLTAKGNKYRERLIKERRAAEEKLREVLTLEEIASLLGLLKVVAELKL*
Ga0137380_104811692	3300012206	Vadose Zone Soil	SERRAESGRALLVRLTAKGNKYRERLIKERRAAEEKLREVLTSEEIASLLGLLKVVAGLKL*
Ga0137377_118404042	3300012211	Vadose Zone Soil	VLNQNQIATLLGFDRTVVHRVIRTLIQEGLASERRAESGRALLVRLTAKGNKYRERLIKERRAAEEKLREVLTLEQIASLLGLLKVVAELKL*
Ga0137385_112300631	3300012359	Vadose Zone Soil	ERRAESGRALLVRLTAKGNKYRERLIKERRAAEEKLREVLTSEEIASLLGLLKVVAGLKL
Ga0137397_107905232	3300012685	Vadose Zone Soil	VVHRAAKTMIQEGLLSERKAESGRALLVQLTAKGNKYREFLIKERRAAEEKVRKELTPDESATLLRLLKVVAEVKF*
Ga0137395_100151651	3300012917	Vadose Zone Soil	ERRAESGRALLVRLTAKGNKYRERLIKERRAAEEKLREVLTSEEIASLLGLLKVVAELKL
Ga0137419_110157431	3300012925	Vadose Zone Soil	TVVHRAVKTMIQEGLLSERKAESGRALLVQLTAKGNKYREFLIKERRAAEEKLRKELSPEESATLLRLLKVVAEVKF*
Ga0137419_118512711	3300012925	Vadose Zone Soil	KTMIQEGLLSERKAESGRALLVQLTAKGNKYREFLIKQRRGAEEKLRKELTAEESATLLRLLKVVAGVKF*
Ga0137407_121428072	3300012930	Vadose Zone Soil	GFDRTVVHRAVKTMIQEGLLSERKAERGRALLVQLTAKGNKYRESLIKERRALDESLRERFTADEISTLLHLLKRTAELKF*
Ga0134081_104258191	3300014150	Grasslands Soil	MQEGLASERRAESGRALLVRLTAKGHKYRERLIKERRAAEEKLREVLTLEEIASLLGLLKVVAELQL*
Ga0134078_100414852	3300014157	Grasslands Soil	MQEGLASERRAESGRALLVRLTAKGNKYRERLIKERRAAEEKLREVLTLEEIASLLGLLKVVAELKL*
Ga0181529_100568391	3300014161	Bog	LSERKADTGRSLLVQLTAKGNKYREGLVKERRAAEAKLRKELTPGEASTLIRLLQRVADLQI*
Ga0137418_112175791	3300015241	Vadose Zone Soil	RAVKTMIQEGLLSERKADKGRSLLVQLTAKGNKYRESLIKERRALDELLRQQLSIDDVATLLRLLKRLAEMEI*
Ga0187818_102823801	3300017823	Freshwater Sediment	GLITEKKAKTGKAILVKLTAKGDKYRDVLIKERRAADEKLSKELTPEERSTLIRLLKLVAELEL
Ga0187785_106388811	3300017947	Tropical Peatland	RTVVHRAVRTMIEEGLVSERKAEKGRALLVQLTAKGNKYREGLIRERRLAEEKLREKLTADESTTLIRLLERVAEIEF
Ga0066669_105397662	3300018482	Grasslands Soil	MQEGLASERRAESGRALLVRLTAKGHKYRERLIKERRAAEEKLREVLTLEEIASLLGLLKVVAELKL
Ga0210401_100519091	3300020583	Soil	GRALLVQLTAKGNKYREGLVRERRAAEDKLRKELTAGEAATLIRLLQRIAELEL
Ga0210401_100925771	3300020583	Soil	LLVQLTAKGNHYREGLIKERRAAEDRLRKELTPRETSTLIRLLQRVADLEF
Ga0210406_106689301	3300021168	Soil	LGFDRTVVHRAIKGMIKEGLLTERKADFGRALLVHLTAKGNKYREYLIKERRVVDEKLHEVLKADEISTLIRLLDAAAALEI
Ga0210405_100622541	3300021171	Soil	NQIATTLGFDRTVVHRAIKTMIHEGLLSERKADTGRALLVQLTAKGNKYREGLVRERRAAEDKLRKELTAGEAATLIRLLQRIAELEL
Ga0210396_108742232	3300021180	Soil	VHRAIKGMIKEGLLTERKADSGRALLVHLTAKGNKYREYLIKERRAVDEKLRKVLKPDEISILIRLLDAAAALEI
Ga0210396_116929491	3300021180	Soil	AERKADTGRALLVQLTAKGNKYREGLVRERRAAEDKVRKELTAGEASTLIQLLQRIAELE
Ga0210388_100660673	3300021181	Soil	IREGLVSERKAATGRALLVQLTAKGNKYREGLVKERRAAEDKLRKELTAGEASTLIRLLQRIAELEL
Ga0210388_110109151	3300021181	Soil	MIHEGLLWERKADTGRALLVQLTAKGNHYREGLIKERRAAEDRLRKELTPRETSTLIRLLQRVADLEF
Ga0210387_100814401	3300021405	Soil	RAIKTMIREGLVSERKAATGRALLVQLTAKGNKYREGLVKERRAAEDKLRKELTAGEASTLIRLLQRIAELEL
Ga0210387_102563681	3300021405	Soil	VKTMIRDGLLSESKAPTGRALLVRLTAKGNKYRENLVRERRAVDEKLKKVLAPDETAELIRLLDVVAPLEF
Ga0210387_110307972	3300021405	Soil	RALLVQLTAKGNKYREGLVKERRAAEDKLRKELTPRETSTLIRLLQRVAELEI
Ga0210387_111385892	3300021405	Soil	KTMIHEGLLSERKADTGRALLVQLTAKGNKYREGLIKERRAAEDKLRKELTAREASTLIRLLKRVSELEV
Ga0210387_112424012	3300021405	Soil	LGFDRTVVHRAIKGMIKEGLLTERKADSGRALLVHLTAKGNKYREYLIKERRAVDEKLRKVLKPNEISILIRLLDIAAALEM
Ga0210383_113093941	3300021407	Soil	EGLLTERKADSGRALLVHLTAKGNKYREYLITERRAVDEKLRKVLKADEISILIRLLDAAAALEI
Ga0210384_112052431	3300021432	Soil	LGFDRTVVHRAIKTMIQEGLLSERKAESGRALLIQLTAKGNKYREFLIKERRAAEDKLRKKIPPSETATLLRLLKVIADLKIY
Ga0210390_110761312	3300021474	Soil	GRALLVQLTAKGNKYREGLIKERRAAEDKLRTELTPVQASTLIRLLKRVAELEI
Ga0210398_100895711	3300021477	Soil	ALLVQLTAKGNHYREGLIKERRAAEDRLRKELTPRETSTLIRLLQRVAELEF
Ga0210410_104147953	3300021479	Soil	DSGRALLLRLTAKGNKYREYLIKERRAVDEKLRKVLKPDEIAILIRLLDAAAALEI
Ga0210409_106629621	3300021559	Soil	TERKADSGRALLVHLTAKGNKYREYLIKERRVVDEKLRKVLKPDEISILIRLLDAAAALE
Ga0208194_10359181	3300025412	Peatland	IKAMIHEGLLSERKADTGRSLLVQLTAKGNKYREGLVKERRAAEAKLRKELTPGEASTLIRLLQRVADLQI
Ga0207700_103555733	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GFDRTVVHRAIKGMIKEGLLTERKADSGRALLLHLTAKGNKYREYLVKERRAVDEKLRKVLKPDEISILIRLLDAAAALEI
Ga0209871_10353221	3300026217	Permafrost Soil	MLNKNQIATLLGYDRTVVHRSIKTMIREGLLGEKKAVSGRALLVHLTAKGSAYRESQIKERRAADEKLRKKFKPTEISTLLRLLPEIASLEF
Ga0209350_10394852	3300026277	Grasslands Soil	VLNQNQIATLLGFDRTVVHRVIRTLIQEGLASERRAESGRALLVRLTAKGNKYRERLIKERRAAEEKLREVLTLEEIASLLGLLKVVAELKL
Ga0209236_10159984	3300026298	Grasslands Soil	RAVKTMIQEGLLSERKAESGRALLVQLTAKGNKYREFLIKERGAAEEKLRKELTPEENATLLRLLKVVAEVKF
Ga0209268_11545372	3300026314	Soil	IRTLIQEGLASERRAESGRALLVRLTAKGNKYRERLIKERRAAEEKLREVLTSEEIASLLGLLKVVAELQL
Ga0209471_12206221	3300026318	Soil	AALLGFDRTVVHRAIKTMIQEGLASEKRAQSGRALLVRLTAKGNKYRERLIKERRAADEKLLRMLLPVEIATLLRLLKAIAEVKF
Ga0209378_11964492	3300026528	Soil	RTLIQEGLASERRAESGRALLVRLTAKGNKYRERLIKERRAAEEKLREVLTSEEIASLLGLLKVVAELQL
Ga0208097_10269361	3300027173	Forest Soil	RAIKGMIKEGLLTERKADSGRALLLRLTAKGNKYREYLIKERRAVDEKLRKVLKPDEIVILIRLLDAAAALEI
Ga0208525_10101941	3300027288	Soil	MLGFDRTVVHRAVKTMIHEGLLSERKADIGRALLVQLTAKGNKYRESLIKERRAAEEKLREQLSPTEIATLITLLKRVADLEF
Ga0209329_10873871	3300027605	Forest Soil	MIKEGLLTERKADSGRALLLRLTAKGNKYREYLIKERRAVDERLRRVLKPDEITILIRLLDAAAALEI
Ga0209333_10838362	3300027676	Forest Soil	TMLGFDRTVVHRAIKTMIHEGLLSERKADTGRALLVQLTAKGNKYREGLIKERRAAEDKLRAELTPAQASTLIRLLKRVAELEI
Ga0209447_100036635	3300027701	Bog Forest Soil	NQIATMLGFDRTVVHRAIKTMIHEGLLSERKADTGRALLVQLTAKGNKYRDALVKERRAAEDKLRKELTAGEASTLIRLLQRIAELEL
Ga0209038_100050284	3300027737	Bog Forest Soil	ALLVQLTAKGNKYRDALVKERRAAEDKLRKELTAGEASTLIRLLQRIAELEL
Ga0209038_100075172	3300027737	Bog Forest Soil	LLSERKADTGRALLVQLTAKGNKYREGLIKERRAAEEKLRKELTSGEASTLIRLLQVITQLKI
Ga0209139_100569861	3300027795	Bog Forest Soil	IHEGLLSERKADTGRALLVQLTTKGNKYREGLVKERRAAEDKLRKELTAGEASTLIRLLQRIADLEL
Ga0209139_101601651	3300027795	Bog Forest Soil	EGLLIERKADSGRALLVRLTAKGNRYRDYLIKERRAVDEKLREKLTPREVTTLIRLLRVVAALEF
Ga0209274_107536372	3300027853	Soil	RKAETGRALLVQLTKKGNKYRECLIKERRAAEDKLRKELTPAQASTLIQLLKQVAEVEI
Ga0209579_100562453	3300027869	Surface Soil	EGLLTERKADSGRALLLHLTAKGNEYRNHLIKERRAVDEKLRKVLKPNEISVLIRLLDAAAALEI
Ga0209169_100446503	3300027879	Soil	RANKTMIHEGLLSERKADTGRALLVQLTAKGNHYREGLIKERRAAEDRLRKELTPRETSTLIRLLQRVADLEF
Ga0209169_104647651	3300027879	Soil	TGRALLVQLTAKGNKYREGLVRERRAAEDKLRKELTAGEAATLIRLLQRIAELEL
Ga0209624_110014332	3300027895	Forest Soil	KTMIYEGLLSERKADTGRALLVQLTAKGNKYREGLIKERRAAEDKLRKELTPAQACTLIRLLKRVAELEI
Ga0265353_10308182	3300028015	Soil	VVHRAIKTMIHEGLLSERRADTGRALLVQLTAKGNKYREGLIKERRAAEDKLRKKLTPAQASTLIRLLKQIA
Ga0209526_102169463	3300028047	Forest Soil	KTMIQEGLLSERKAESGRALLVQLTAKGNKYREFLIKERRAAEEKLRKELTPEESATLLRLLKVVAEVKF
Ga0311368_106649521	3300029882	Palsa	SGRGLLVHLTAKGNSYRETLIRERRAVDERLRKKLKPRETSTLLRLLEEVAALEF
Ga0311340_103319621	3300029943	Palsa	DRTVVHRSIKTMIREGLLSEKKAESGRGLLVHLTAKGNSYRETLIRERRAVDERLRKKLKPRETSTLLRLLEEVAALEF
Ga0310686_1109834561	3300031708	Soil	LLSERKADTGRALLVQLTAKGNKYREGLIKERRAAEDKLREELTPARASALIRLLKRVAELEI
Ga0310686_1159679991	3300031708	Soil	TVVHRAIKTMIHEGLLSERKADTGRALLVQLTAKGNKYREGLIKERRAAEDRLRKELTPRETSTLIRLLHRVAELEF
Ga0307476_109653112	3300031715	Hardwood Forest Soil	EGLLTERKADSGRALLVHLTAKGNKYREYLITERRAVDEKLRKVLKADGISILIRLLDAAAALEI
Ga0307474_103588861	3300031718	Hardwood Forest Soil	IKGMIKEGLLTERKADSGRALLLRLTAKGNKYREYLIKERRAVDEKLRKVLKPDEIAILIRLLDAAAALEI
Ga0307475_104543231	3300031754	Hardwood Forest Soil	DRTVVHRAIKGMSKEGLLTERKADSGRALLVHLTAKGNKYREYLIKERRAVDEKLRKVLKQDEISTLIRLLDVTAALEI
Ga0307478_109300221	3300031823	Hardwood Forest Soil	LLGFDRTVVHRAMKGMIKEGLLRERKADSGRALLVHLTAKGNKYREYLIKERRAVDEKLRQVLKRDEISTLIRLLDVAAAIEI
Ga0307470_105416582	3300032174	Hardwood Forest Soil	KLLGFDRTVVHRAIKGMIKEGLLTERKADSGRALLVHLTAKGNKYRDYLIKERRAVDEKLRKVLKPDEISTLIRLLDVAAALEI
Ga0348332_110989961	3300032515	Plant Litter	MIHEGLLSERKADTGRALLVQLTTKGNKYREGLIKERRAAEDKLRKELTPAQASTLIRLLKQIAELEI
Ga0335085_103302952	3300032770	Soil	MLGFDRTVVHRAVKTMIHEGLLSERKADIGRALLVQLTAKGNKYRESLIKERRAAEEKLREQLSPTEIATLVTLLKRVADLEF
Ga0335083_109847312	3300032954	Soil	TVVHRAVKTMIHEGLLSERKADIGRALLVQITAKGNKYRESLIKERRAAEERLREQLSSTEIATLITLLKRVADLEF
Ga0335084_101033723	3300033004	Soil	MLGFDRTVVHRAVKTMIHEGLLSERKADIGRALLVQLTAKGNKYRESLIKERRAAEERLREQLSSTEIATLITLLKRVADLEF
Ga0370515_0066454_1225_1527	3300034163	Untreated Peat Soil	MSTLRGGAALNQNQIATILGFDRTVVHRAIKTMIHEGLLSERKADTGRALLVQLTTKGNKYREGLVKERRAAEDKLRKELTAGEASTLIRLLQRIADLEL

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104539

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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