NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F104594

Metagenome / Metatranscriptome Family F104594

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F104594
Family Type Metagenome / Metatranscriptome
Number of Sequences 100
Average Sequence Length 76 residues
Representative Sequence EGERSYAELVDRPDDVGPDGYRFVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Number of Associated Samples 88
Number of Associated Scaffolds 100

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 99.00 %
% of genes from short scaffolds (< 2000 bps) 96.00 %
Associated GOLD sequencing projects 76
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (64.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(16.000 % of family members)
Environment Ontology (ENVO) Unclassified
(56.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(66.000 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 21.43%    β-sheet: 0.00%    Coil/Unstructured: 78.57%
Feature Viewer
Powered by Feature Viewer

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 100 Family Scaffolds
PF13365Trypsin_2 72.00
PF10988DUF2807 2.00
PF03631Virul_fac_BrkB 1.00
PF04391DUF533 1.00
PF01872RibD_C 1.00

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 100 Family Scaffolds
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 1.00
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 1.00
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 1.00
COG2979Uncharacterized membrane protein YebE, DUF533 familyFunction unknown [S] 1.00

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms64.00 %
UnclassifiedrootN/A36.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c0830300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1125Open in IMG/M
3300000891|JGI10214J12806_11334721All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei501Open in IMG/M
3300004114|Ga0062593_101015447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei852Open in IMG/M
3300005162|Ga0066814_10018542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei945Open in IMG/M
3300005329|Ga0070683_100204891All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1873Open in IMG/M
3300005334|Ga0068869_100964279Not Available741Open in IMG/M
3300005344|Ga0070661_100839191All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei756Open in IMG/M
3300005345|Ga0070692_11213370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei538Open in IMG/M
3300005366|Ga0070659_100982296All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta741Open in IMG/M
3300005367|Ga0070667_100231533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1647Open in IMG/M
3300005444|Ga0070694_101033943All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei683Open in IMG/M
3300005455|Ga0070663_100665282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei882Open in IMG/M
3300005458|Ga0070681_11712557Not Available555Open in IMG/M
3300005466|Ga0070685_10098128All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1784Open in IMG/M
3300005518|Ga0070699_100522144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1080Open in IMG/M
3300005530|Ga0070679_101218715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta698Open in IMG/M
3300005539|Ga0068853_100042624All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3881Open in IMG/M
3300005543|Ga0070672_100237707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1532Open in IMG/M
3300005546|Ga0070696_100222127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1418Open in IMG/M
3300005548|Ga0070665_100237406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1823Open in IMG/M
3300005549|Ga0070704_100575607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei987Open in IMG/M
3300005564|Ga0070664_100213352All Organisms → cellular organisms → Bacteria1725Open in IMG/M
3300005577|Ga0068857_101460415All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria666Open in IMG/M
3300005616|Ga0068852_100344575All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1453Open in IMG/M
3300005618|Ga0068864_100303459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei1495Open in IMG/M
3300005618|Ga0068864_101991471All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei587Open in IMG/M
3300005719|Ga0068861_100887154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei844Open in IMG/M
3300005842|Ga0068858_100742967Not Available956Open in IMG/M
3300005844|Ga0068862_100829610All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei905Open in IMG/M
3300005844|Ga0068862_102438611Not Available535Open in IMG/M
3300006880|Ga0075429_101896282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta516Open in IMG/M
3300009098|Ga0105245_10330776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1504Open in IMG/M
3300009156|Ga0111538_11717587All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta791Open in IMG/M
3300009162|Ga0075423_11295581All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta779Open in IMG/M
3300009162|Ga0075423_11851548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta651Open in IMG/M
3300009176|Ga0105242_10128152All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta2187Open in IMG/M
3300009176|Ga0105242_12627783Not Available553Open in IMG/M
3300009551|Ga0105238_10337474All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1495Open in IMG/M
3300009553|Ga0105249_11438939Not Available761Open in IMG/M
3300010371|Ga0134125_12519924All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae559Open in IMG/M
3300010373|Ga0134128_10254780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1969Open in IMG/M
3300010401|Ga0134121_13050633Not Available516Open in IMG/M
3300010403|Ga0134123_10102580All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta2280Open in IMG/M
3300012897|Ga0157285_10203607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta624Open in IMG/M
3300012907|Ga0157283_10300122Not Available557Open in IMG/M
3300012908|Ga0157286_10296799All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria589Open in IMG/M
3300012909|Ga0157290_10280362Not Available605Open in IMG/M
3300012915|Ga0157302_10023446All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1574Open in IMG/M
3300012961|Ga0164302_11818129Not Available515Open in IMG/M
3300013104|Ga0157370_10489403All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1130Open in IMG/M
3300013308|Ga0157375_10866417Not Available1049Open in IMG/M
3300014325|Ga0163163_12000516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria639Open in IMG/M
3300014969|Ga0157376_11946349Not Available625Open in IMG/M
3300015201|Ga0173478_10243674All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta782Open in IMG/M
3300017792|Ga0163161_10839642All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei774Open in IMG/M
3300017792|Ga0163161_12091342Not Available503Open in IMG/M
3300018469|Ga0190270_12265958Not Available604Open in IMG/M
3300020082|Ga0206353_11887389All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta630Open in IMG/M
3300025900|Ga0207710_10077358All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1537Open in IMG/M
3300025903|Ga0207680_11227674Not Available534Open in IMG/M
3300025908|Ga0207643_10779796Not Available619Open in IMG/M
3300025911|Ga0207654_10868989Not Available653Open in IMG/M
3300025912|Ga0207707_11119938Not Available641Open in IMG/M
3300025921|Ga0207652_10821987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta824Open in IMG/M
3300025923|Ga0207681_11845905Not Available504Open in IMG/M
3300025927|Ga0207687_10408829All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1118Open in IMG/M
3300025932|Ga0207690_11266187Not Available616Open in IMG/M
3300025938|Ga0207704_10364429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1129Open in IMG/M
3300025940|Ga0207691_11579927Not Available534Open in IMG/M
3300025945|Ga0207679_11065440All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta741Open in IMG/M
3300025945|Ga0207679_12071590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria517Open in IMG/M
3300025949|Ga0207667_10590574Not Available1120Open in IMG/M
3300025949|Ga0207667_11173416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta748Open in IMG/M
3300025961|Ga0207712_10717928Not Available873Open in IMG/M
3300025972|Ga0207668_11879448Not Available540Open in IMG/M
3300025986|Ga0207658_10224346All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1583Open in IMG/M
3300026089|Ga0207648_10291873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1460Open in IMG/M
3300026095|Ga0207676_12319641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria534Open in IMG/M
3300026116|Ga0207674_10864636Not Available872Open in IMG/M
3300026142|Ga0207698_10428338All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1271Open in IMG/M
3300028380|Ga0268265_12284335Not Available548Open in IMG/M
3300028589|Ga0247818_10581229Not Available769Open in IMG/M
3300028589|Ga0247818_10796814Not Available659Open in IMG/M
3300028590|Ga0247823_10525698Not Available892Open in IMG/M
3300028592|Ga0247822_11249250Not Available621Open in IMG/M
3300028809|Ga0247824_10934907Not Available544Open in IMG/M
3300028812|Ga0247825_10693817All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta732Open in IMG/M
3300030336|Ga0247826_10783957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta745Open in IMG/M
3300030336|Ga0247826_10825249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta727Open in IMG/M
3300030336|Ga0247826_11044024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium651Open in IMG/M
3300031547|Ga0310887_10653225All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta649Open in IMG/M
3300031562|Ga0310886_10216406Not Available1054Open in IMG/M
3300031562|Ga0310886_10236382All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1015Open in IMG/M
3300031716|Ga0310813_10420211All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1154Open in IMG/M
3300031995|Ga0307409_102189914Not Available582Open in IMG/M
3300032002|Ga0307416_100929825Not Available971Open in IMG/M
3300032075|Ga0310890_10157419All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta1510Open in IMG/M
3300033550|Ga0247829_11371996Not Available584Open in IMG/M
3300033551|Ga0247830_10025141All Organisms → cellular organisms → Bacteria3605Open in IMG/M
3300033551|Ga0247830_10541400Not Available918Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil16.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere8.00%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere7.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere7.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere6.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.00%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere5.00%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere4.00%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere4.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.00%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.00%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.00%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.00%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.00%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.00%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.00%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.00%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005162Soil and rhizosphere microbial communities from Laval, Canada - mgLABEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012907Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015201Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)EnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025903Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028590Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_083030012228664021SoilAAAPGDRSYAELVDRPDDVGPAGYRFSSDGQRALALALTRLLAEAGERSEEAETPVDRGSPRPEPVARIVPGD
JGI10214J12806_1133472123300000891SoilADDVGPDGYRFVSDGQRALAMTLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0062593_10101544723300004114SoilRADDVGPDGYRFVSDGQRALAMTLAELLAEAGDRSGTSDTPVDQGSPRPEPISRIVPGD*
Ga0066814_1001854213300005162SoilNHRWVRYRSALTALAEQLERFGSVWRETPEGERSYPELVDRADDVGPDGYRFVSDGQRALALTLTELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0070683_10020489133300005329Corn RhizosphereELVDRPDDVGPAGYRFSSDGQRALALALTRLLAEAGERSEEAETPVDRGSPRPEPVARIVPGD*
Ga0068869_10096427923300005334Miscanthus RhizosphereQLEQFEQAWRARPEGERSYAELVDRPDDVGPAGYRLSSDEQRALILAITEALAAAGARSAEGPGDVARGSPRPEPVARIMPSG*
Ga0070661_10083919123300005344Corn RhizosphereDDVGPDGYRFVSDGQRALAMTLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0070692_1121337013300005345Corn, Switchgrass And Miscanthus RhizosphereARPDGERSYPELVDRADEVGPDGYRFVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0070659_10098229623300005366Corn RhizosphereARPDGERSYPELVDRADDVGPDGYRFVSDGQRALGLSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0070667_10023153343300005367Switchgrass RhizosphereVDRPDDVGPDGYRFVSDGQRALALSLAELLSEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0070694_10103394323300005444Corn, Switchgrass And Miscanthus RhizosphereGERSYPELVDRADGVGPDGYRFVSDGQRALALTLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0070663_10066528213300005455Corn RhizosphereELVDRGGDVGPAGYRFASGGQRALALTLTELLAEAGSRSADAETPLDRGSPRPEAVARIVPGD*
Ga0070681_1171255713300005458Corn RhizosphereFERAWRSHSDGERSYAELVDRPADVGPAGYRLASAEQRALVLALTELLVAAGARSELGPGDVTLGSPRPEPVARIVPSD*
Ga0070685_1009812813300005466Switchgrass RhizosphereRGGDVGPAGYRFASGGQRALALTLTELLAEAGSRSADAETPLDRGSPRPEAVARIVPGD*
Ga0070699_10052214413300005518Corn, Switchgrass And Miscanthus RhizosphereDVGPDGYRFVSDGQRALALSLAGLLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0070679_10121871523300005530Corn RhizosphereYPELVDRADDVGPDGYRFVSDGQRALGLSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0068853_10004262413300005539Corn RhizosphereQLERFGSAWRARPDGERSYPELVDRADDVGPDGYRFVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0070672_10023770713300005543Miscanthus RhizosphereQFEQAWRARPEGERSYAELVDRPDDVGPAGYRLSSDEQRALILAITEALAAAGARSEEGPGDVARGSPRPEPVARIMPSG*
Ga0070696_10022212713300005546Corn, Switchgrass And Miscanthus RhizosphereVGPDGYRLVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVARIVPGE*
Ga0070665_10023740643300005548Switchgrass RhizosphereTAWRETPEGERSYAELVDRPDDVGPDGYRFVSDGQRGLALSLAGLLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0070704_10057560713300005549Corn, Switchgrass And Miscanthus RhizosphereTPDGERSYRELVDRGGDVGPAGYRFASGGQRALALTLTELLAEAGSRSADAETPLDRGSPRPEAVARIVPGD*
Ga0070664_10021335243300005564Corn RhizosphereDGERSYRELVDRGGDVGPAGYRFASGGQRALALTLTELLAEAGSRSADAETPLDRGSPRPEAVARIVPGD*
Ga0068857_10146041523300005577Corn RhizosphereQLEQFERAWQSHVGDERSYAELVDRSDDVGPAGYRVVSAEQRALLLALTELLAAAGARSEAGPVDVALGSPRPEPVARIVPSD*
Ga0068852_10034457523300005616Corn RhizosphereAWRARPEGERSYAELVDRPDDVGPAGYRLSSDEQRALILAVTEALAAAGARSEEGPGDVARGSPRPEPVARIMPSG*
Ga0068864_10030345933300005618Switchgrass RhizosphereEGERSYAELVDRPDDVGPDGYRFVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0068864_10199147113300005618Switchgrass RhizosphereRADDVGPDGYRLVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVARIVPGE*
Ga0068861_10088715413300005719Switchgrass RhizosphereVRYRSALTALAEQLERLGSAWRATPDGERSYPELVDRADDVGPDGYRFVSDGQRALAMTLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0068858_10074296713300005842Switchgrass RhizosphereAIAAQLEQFERAWQTHGDDERSYAELVDRPDDVGPAGYRLTSAEQRALLLALTELLAAAGARSEAGPGDVALGSPRPEPVARIVPSD*
Ga0068862_10082961023300005844Switchgrass RhizosphereRSYPELVDRADNVGPDGYRLVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVARIVPGE*
Ga0068862_10243861113300005844Switchgrass RhizosphereARQLEQFEQAWRARPEGERSYAELVDRPDDVGPAGYRLSSDEQRALILAVTEALAAAGARSEEGPGDVARGSPRPEPVARIMPSG*
Ga0075429_10189628213300006880Populus RhizosphereERSYPELVERPEDVGPAGYRLTSEAQRALALALTELLAEAGTRAGDDEASVTRGAPRPESVARIVPGD*
Ga0105245_1033077633300009098Miscanthus RhizosphereGERSYPELVDRADDVGPDGYRLVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVARIVPGE*
Ga0111538_1171758723300009156Populus RhizosphereARDVGPDGYRFVSDGQRALALTLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0075423_1129558123300009162Populus RhizosphereDVGPDGYRFVSDAQRALALSLAELLAEAGDRSETSDTPVGRGSPRPEPVSRIVPGE*
Ga0075423_1185154813300009162Populus RhizosphereRADDVGPDGYRFVSDGQRALGLSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0105242_1012815213300009176Miscanthus RhizosphereRPDDVGPDGYRFVSDGQRALALSLAELLSEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0105242_1262778313300009176Miscanthus RhizosphereQLEQFEQAWRARPEGERSYAELVDRPDDVGPAGYRLSSDEQRALILAVTEALAAAGARSEEGPGDVARGSPRPEPVARIMPSG*
Ga0105238_1033747433300009551Corn RhizosphereDGERSYAELVDRPDDVGPDGYRFVSDGQRALALSLAELLSEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0105249_1143893923300009553Switchgrass RhizospherePDDVGPAGYRFSSDGQRALALALTRLLAEAGERSDEAETPVDRGSPRPEPVARIVPGD*
Ga0134125_1251992413300010371Terrestrial SoilADDVGPDGYRLVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVARIVPGE*
Ga0134128_1025478053300010373Terrestrial SoilFGTAWRETLEGERSYAELVDRPDDLGPDGYRFVSDGQRALALSLAGLLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0134121_1305063323300010401Terrestrial SoilRLAEAWQETPDGERSYRELVDRGGDVGPAGYRFASGGQRALALTLTELLAEAGSRSADAETPLDRGSPRPEAVARIVPGD*
Ga0134123_1010258013300010403Terrestrial SoilAVAAIARQLEQFEQAWRARPEGERSYAELVDRPDDVGPAGYRLSSDEQRALILAVTEALAAAGARSAEGPGDVARGSPRPEPVARIMPSG*
Ga0157285_1020360723300012897SoilSAWRAKPNGERSYPELVDRADDVGPDSYRFVSDGQRALAMTLAELLAEAGDRSGTSDTPVDQGSPRPEPISRIVPGD*
Ga0157283_1030012223300012907SoilWGATPEGERSYPELVDRADDVGPDGYRFVSDGQSALALSLAELLAEAGDRSETSDTPVGRGSPRPEPVSRIVPGE*
Ga0157286_1029679913300012908SoilSAWRARPEGERSYPELVDRADDVGPDGYRLVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVARIVPGE*
Ga0157290_1028036213300012909SoilSAWRAAAPGDRSYAELVDRPDDVGPAGYRFSSDGQRALALALTRLLAEAGERSDEAETPVDRGSPRPEPVARIVPGD*
Ga0157302_1002344643300012915SoilERSYPELVDRADDVGPDGYRLVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVARIVPGE*
Ga0164302_1181812923300012961SoilAALAEQLERLAEAWQETPDGERSYRELVDRGGDVGPAGYRFASGGQRALALTLTELLAEAGSRSADAETPLDRGSPRPEAVARIVPGD*
Ga0157370_1048940313300013104Corn RhizosphereSALTALADQLERFGSAWRARPEGERSYPELVDRADDVGPDGYRLVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVARIVPGE*
Ga0157375_1086641723300013308Miscanthus RhizosphereSALTALAEQLERLGSAWRATPDGERSYPELVDRADDVGPDGYRFVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0163163_1200051613300014325Switchgrass RhizosphereHRWVRYRSALTALAEQLERFESAWRARPDGERSYPELVDRADDVGPDGYRLVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVARIVPGE*
Ga0157376_1194634913300014969Miscanthus RhizosphereERFGTAWRETPEGERSYAELVDRPDDVGPDGYRFVSDGQRGLALSLAGLLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD*
Ga0173478_1024367413300015201SoilAEQLERFGSAWRARPEGERSYPELVDRADDVGPDGYRFVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVARIVPGE*
Ga0163161_1083964213300017792Switchgrass RhizosphereHRWVRYRSALTALAEQLERFGSAWRARPEGERSYPELVDRADDVGPDGYRLVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVARIVPGE
Ga0163161_1209134213300017792Switchgrass RhizosphereLERLAEAWQETPDGERSYRELVDRGGDVGPAGYRFASGGQRALALTLTELLAEAGSRSADAETPLDRGSPRPEAVARIVPGD
Ga0190270_1226595813300018469SoilRELVDRGEDVGPAGYRLTSNAQRSLALSLTELLAEVGERSDEAETGVEHGAPRPQPIARIVPATDR
Ga0206353_1188738923300020082Corn, Switchgrass And Miscanthus RhizosphereDDVGPDGYRFVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0207710_1007735833300025900Switchgrass RhizosphereLERFGTAWRETPEGERSYAELVDRPDDVGPDGYRFVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0207680_1122767413300025903Switchgrass RhizosphereAWQETPDGERSYRELVDRGGDVGPAGYRFASGGQRALALTLTELLAEAGSRSADAEAPLDRGSPRPEAVARIVPGD
Ga0207643_1077979613300025908Miscanthus RhizosphereYRSALTALAEQLERLGSAWRATPDGERSYPELVDRADDVGPDGYRFVSDGQRALAMTLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0207654_1086898923300025911Corn RhizosphereIAAIAAQLEQFERAWQTHGDDERSYAELVDRPDDVGPAGYRLTSAEQRALLLALTELLAAAGARSEAGPVDVALGSPRPEPVARIVPSD
Ga0207707_1111993813300025912Corn RhizosphereRWVRYRSALTAIAAQLEQFERAWRSHSDGERSYAELVDRRADVGPAGYRLASAEQRALVLALTELLVAAGARSELGPGDVALGSPRPEPVARIVPSD
Ga0207652_1082198713300025921Corn RhizosphereRWVRYRSALTALAEQLERFGSAWRARPDGERSYPELVDRADDVGPDGYRFVSDGQRALGLSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0207681_1184590513300025923Switchgrass RhizosphereELVDRADDVGPDGYRFVSDGQRALGLSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0207687_1040882913300025927Miscanthus RhizosphereDAVGERSYPELVDRADGVGPDGYRFVSDGQRALALTLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0207690_1126618723300025932Corn RhizosphereEQFERAWQTHGDDERSYAELVDRPDDVGPAGYRLTSAEQRALLLALTELLAAAGARSEAGPGDVALGSPRPEPVARIVPSD
Ga0207704_1036442923300025938Miscanthus RhizosphereRYRSAVAAIARQLEQFEQAWRARPEGERSYAELVDRPDDVGPAGYRLSSDEQRALILAVTEALAAAGARSEEGPGDVARGSPRPEPVARIMPSG
Ga0207691_1157992713300025940Miscanthus RhizosphereQFEQAWRARPEGERSYAELVDRPDDVGPAGYRLSSDEQRALILAITEALAAAGARSEEGPGDVARGSPRPEPVARIMPSG
Ga0207679_1106544013300025945Corn RhizosphereAWQETPDGERSYRELVDRGGDVGPAGYRFASGGQRALALTLTELLAEAGSRSADAETPLDRGSPRPEAVARIVPGD
Ga0207679_1207159023300025945Corn RhizosphereWRARPEGERSYPELVDRADDVGPDGYRLVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVARIVPGE
Ga0207667_1059057413300025949Corn RhizosphereALTALAEQLERFGTAWRDTPEGERSYAELVDRPDDVGPDGYRFVSDGQRALALSLAELLSEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0207667_1117341613300025949Corn RhizosphereAELVDRPDDVGPAGYRFSSDGQRALALALTRLLAEAGERSEEAETPVDRGSPRPEPVARIVPGD
Ga0207712_1071792823300025961Switchgrass RhizosphereVGPAGYRFSSDGQRALALALTRLLAEAGERSDEAETPVDRGSPRPEPVARIVPGD
Ga0207668_1187944813300025972Switchgrass RhizosphereLAEAWQETPDGERSYRELVDRGGDVGPAGYRFASGGQRALALTLTELLAEAGSRSADAETPLDRGSPRPEAVARIVPGD
Ga0207658_1022434633300025986Switchgrass RhizosphereRWVRYRSALTALAEQLERFGTAWRETPEGERSYAELVDRPDDVGPDGYRFVSDGQRALALSLAGLLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0207648_1029187333300026089Miscanthus RhizosphereAELVDRPDDVGPDGYRFVSDGQRALALSLAGLLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0207676_1231964113300026095Switchgrass RhizosphereRWVRYRRALTALAEQLERFGRAWRARPEGERSYPELVDRADDVGPDGYRLVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVARIVPGE
Ga0207674_1086463623300026116Corn RhizosphereLEQFEQAWRARPEGERSYAELVDRPDDVGPAGYRLSSDEQRALILAITEALAAAGARSEEGPGDVARGSPRPEPVARIMPSG
Ga0207698_1042833813300026142Corn RhizosphereWRARPEGERSYAELVDRPDDVGPAGYRLSSDEQRALILAVTEALAAAGARSEEGPGDVARGSPRPEPVARIMPSG
Ga0268265_1228433523300028380Switchgrass RhizosphereRAPAPGDRSYAELVDRPDDVGPAGYRFSSDGQRALALALTRLFAEAGERSDEAETPVDRGSPRPEPVARIVPGD
Ga0247818_1058122923300028589SoilPELVQRPEDVGPAGYRLTSEAQRALALALTELLAEAGTRAGDDDASVTRGAPRPEPVARIVPGD
Ga0247818_1079681413300028589SoilWVRYRSAVAAIARQLEQFEQAWRARPEGERSYAELVDRPDDVGPAGYRLSSDEQRALILAVTEALAAAGARSEEGPGDVARGSPRPEPVARIMPSG
Ga0247823_1052569823300028590SoilSYAELVDRPDDVGPDGYRFVSDGQRALALSLAELLSEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0247822_1124925023300028592SoilAEQLERFDTAWRDTPDGERSYAELVDRPDDVGPDGYRFVSDGQRALALSLAELLSEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0247824_1093490713300028809SoilEQLERFGTAWRDTPEGERSYAELVDRPDDVGPDGYRFVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0247825_1069381713300028812SoilFGAAWNATPVGERSYPELVQRPEDVGPAGYRLTSEAQRALALALTELLAEAGTRAGDDDASVTRGAPRPEPVARIVPGD
Ga0247826_1078395723300030336SoilVRALTELLEEFGAAWNATPEGERSYPELVERPEDVGPAGYRLTSAAQRALALALTELLAEAGTRAGDDEASVTRGAPRPESVARIVPGD
Ga0247826_1082524923300030336SoilRPDGYRFVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0247826_1104402413300030336SoilLGEALAEQLERLAEAWQETPDGERSYRELVDRGGDVGPAGYRFASGGQRALALTLTELLAEAGSRSADAETPLDRGSPRPEAVARIVPGD
Ga0310887_1065322523300031547SoilSEDVGPAGYRLTSEAQRALALALTELLAEAGTRAGDEEASVTRGAPRPEPVARIVPGD
Ga0310886_1021640613300031562SoilEQFEQAWRARPEGERSYADLVDRPDDVGPAGYRLSSAEQRAPILAVTEALAVAGARSEEGPGDVARGSPRPEPVARIMPSG
Ga0310886_1023638213300031562SoilELVDRPDDVGPDGYRFVSDGQRALALSLAELLAEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0310813_1042021113300031716SoilIAAIAAQLEQFERAWQTHGDDERSYAELVDRPDDVGPAGYRRTSAEQRALLLALTELLAAAGARSEAGPGDVALGSPRPEPVARIVPSD
Ga0307409_10218991423300031995RhizosphereRSALAALTELLEEFGAAWNAAPEGERSYPELVQRSEDVGPAGYRLTSEAQRALALALTELLAEAGTRAGDDEASVTRGAPRPEPVARIVPGD
Ga0307416_10092982523300032002RhizosphereGSAWRETPDEERSYRELVDRARDVGPDGYRFVSDGQRALALTLAELLAEAGDRSETSDTPVDRGSPRPQPVSRIVPGE
Ga0310890_1015741933300032075SoilAKQLEQFEQAWRARPEGERSYAELVDRPDDVGPAGYRLSSDEQRALILAVTEALAAAGARSEEGPGDVARGSPRPEPVARIMPSG
Ga0247829_1137199613300033550SoilALADQLERFGTAWRDTPEGERSYAELVDRPDDVGPDGYRFVSDGQRALALSLAELLSEAGDRSETSDTPVDRGSPRPEPVSRIVPGD
Ga0247830_1002514113300033551SoilAWRARPEGERSYAELVDRPDDVGPAGYRLSSDEQRALILAVTEALAAAGARSAEGPGDVARGSPRPEPVARIMPSG
Ga0247830_1054140023300033551SoilRYDRGGDEGPAGYRFASGGQRALALTLTELLAEAGSRSADAETPLDRGSPRPEAVARIVPGD

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.