Metagenome Family F104609

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104609
Family Type	Metagenome
Number of Sequences	100
Average Sequence Length	97 residues
Representative Sequence	MTLVAGSLLVAPLTAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Number of Associated Samples	54
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	38.00 %
% of genes near scaffold ends (potentially truncated)	31.00 %
% of genes from short scaffolds (< 2000 bps)	76.00 %
Associated GOLD sequencing projects	50
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (82.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (51.000 % of family members)
Environment Ontology (ENVO)	Unclassified (75.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (79.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 3.19% β-sheet: 57.45% Coil/Unstructured: 39.36%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF12773	DZR	9.00
PF00496	SBP_bac_5	8.00
PF01717	Meth_synt_2	7.00
PF13191	AAA_16	5.00
PF09084	NMT1	5.00
PF02728	Cu_amine_oxidN3	4.00
PF01966	HD	3.00
PF04392	ABC_sub_bind	3.00
PF03712	Cu2_monoox_C	2.00
PF01063	Aminotran_4	2.00
PF07452	CHRD	2.00
PF13676	TIR_2	1.00
PF05988	DUF899	1.00
PF03243	MerB	1.00
PF04909	Amidohydro_2	1.00
PF02541	Ppx-GppA	1.00
PF00211	Guanylate_cyc	1.00
PF00528	BPD_transp_1	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	7.00
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	5.00
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	5.00
COG0115	Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase	Amino acid transport and metabolism [E]	4.00
COG3733	Cu2+-containing amine oxidase	Secondary metabolites biosynthesis, transport and catabolism [Q]	4.00
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	3.00
COG0248	Exopolyphosphatase/pppGpp-phosphohydrolase	Signal transduction mechanisms [T]	2.00
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.00
COG4312	Predicted dithiol-disulfide oxidoreductase, DUF899 family	General function prediction only [R]	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	82.00 %
Unclassified	root	N/A	18.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	82.00 %
Unclassified	root	N/A	18.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	82.00 %
Unclassified	root	N/A	18.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	39.00 %
Unclassified	root	N/A	18.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	39.00 %
Unclassified	root	N/A	18.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	39.00 %
Unclassified	root	N/A	18.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	32.00 %
Unclassified	root	N/A	18.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	32.00 %
Unclassified	root	N/A	18.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10155935	Not Available	547	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10119820	Not Available	550	Open in IMG/M
3300004267\|Ga0066396_10033856	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	757	Open in IMG/M
3300004268\|Ga0066398_10090481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300004281\|Ga0066397_10043127	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	785	Open in IMG/M
3300004281\|Ga0066397_10063771	Not Available	698	Open in IMG/M
3300004633\|Ga0066395_10048184	All Organisms → cellular organisms → Bacteria	1874	Open in IMG/M
3300004633\|Ga0066395_10063180	Not Available	1680	Open in IMG/M
3300004633\|Ga0066395_10197617	All Organisms → cellular organisms → Bacteria → Proteobacteria	1051	Open in IMG/M
3300005332\|Ga0066388_102475928	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	943	Open in IMG/M
3300005332\|Ga0066388_103611000	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	790	Open in IMG/M
3300005332\|Ga0066388_104816191	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	686	Open in IMG/M
3300005332\|Ga0066388_105968628	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005713\|Ga0066905_100064258	All Organisms → cellular organisms → Bacteria	2326	Open in IMG/M
3300005713\|Ga0066905_100233348	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1401	Open in IMG/M
3300005764\|Ga0066903_100196135	All Organisms → cellular organisms → Bacteria	3011	Open in IMG/M
3300005764\|Ga0066903_100762335	All Organisms → cellular organisms → Bacteria → Proteobacteria	1721	Open in IMG/M
3300005983\|Ga0081540_1040655	All Organisms → cellular organisms → Bacteria → Proteobacteria	2421	Open in IMG/M
3300006871\|Ga0075434_100078371	All Organisms → cellular organisms → Bacteria → Proteobacteria	3300	Open in IMG/M
3300006903\|Ga0075426_10921349	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300006904\|Ga0075424_100059469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3996	Open in IMG/M
3300007076\|Ga0075435_100172163	All Organisms → cellular organisms → Bacteria → Proteobacteria	1827	Open in IMG/M
3300009147\|Ga0114129_11454724	Not Available	844	Open in IMG/M
3300009162\|Ga0075423_11791651	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300009792\|Ga0126374_10007813	All Organisms → cellular organisms → Bacteria	3994	Open in IMG/M
3300009792\|Ga0126374_10222573	Not Available	1211	Open in IMG/M
3300010043\|Ga0126380_10031816	All Organisms → cellular organisms → Bacteria	2674	Open in IMG/M
3300010043\|Ga0126380_10053291	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2199	Open in IMG/M
3300010043\|Ga0126380_10708638	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300010046\|Ga0126384_10005756	All Organisms → cellular organisms → Bacteria	7575	Open in IMG/M
3300010046\|Ga0126384_10010622	All Organisms → cellular organisms → Bacteria → Proteobacteria	5718	Open in IMG/M
3300010046\|Ga0126384_10050974	All Organisms → cellular organisms → Bacteria	2855	Open in IMG/M
3300010046\|Ga0126384_10325560	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1272	Open in IMG/M
3300010046\|Ga0126384_10835153	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	827	Open in IMG/M
3300010046\|Ga0126384_11912787	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300010046\|Ga0126384_11912789	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	566	Open in IMG/M
3300010046\|Ga0126384_12442166	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300010047\|Ga0126382_10316343	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300010048\|Ga0126373_10042364	All Organisms → cellular organisms → Bacteria	4011	Open in IMG/M
3300010048\|Ga0126373_10048744	All Organisms → cellular organisms → Bacteria	3757	Open in IMG/M
3300010048\|Ga0126373_10895077	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	951	Open in IMG/M
3300010048\|Ga0126373_12390586	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300010358\|Ga0126370_10109205	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1934	Open in IMG/M
3300010359\|Ga0126376_10112002	All Organisms → cellular organisms → Bacteria	2107	Open in IMG/M
3300010359\|Ga0126376_10235181	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1547	Open in IMG/M
3300010359\|Ga0126376_10274019	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1451	Open in IMG/M
3300010359\|Ga0126376_10630875	All Organisms → cellular organisms → Bacteria	1019	Open in IMG/M
3300010359\|Ga0126376_11067173	Not Available	813	Open in IMG/M
3300010360\|Ga0126372_10053968	All Organisms → cellular organisms → Bacteria	2745	Open in IMG/M
3300010360\|Ga0126372_11457051	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	719	Open in IMG/M
3300010360\|Ga0126372_11699618	Not Available	672	Open in IMG/M
3300010361\|Ga0126378_10089914	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3000	Open in IMG/M
3300010362\|Ga0126377_10095846	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2696	Open in IMG/M
3300010362\|Ga0126377_10765921	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1022	Open in IMG/M
3300010366\|Ga0126379_10243937	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1764	Open in IMG/M
3300010366\|Ga0126379_10531953	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300010366\|Ga0126379_11290411	All Organisms → cellular organisms → Bacteria	836	Open in IMG/M
3300010376\|Ga0126381_100654544	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1499	Open in IMG/M
3300010376\|Ga0126381_102385007	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	759	Open in IMG/M
3300010376\|Ga0126381_102939043	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	678	Open in IMG/M
3300010398\|Ga0126383_10872213	All Organisms → cellular organisms → Bacteria	985	Open in IMG/M
3300010398\|Ga0126383_11396931	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300010398\|Ga0126383_12018072	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	664	Open in IMG/M
3300012948\|Ga0126375_10092918	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1763	Open in IMG/M
3300012948\|Ga0126375_10762777	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	761	Open in IMG/M
3300012948\|Ga0126375_10865784	Not Available	722	Open in IMG/M
3300012948\|Ga0126375_12085542	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300012971\|Ga0126369_10276233	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1668	Open in IMG/M
3300012971\|Ga0126369_10483718	All Organisms → cellular organisms → Bacteria	1293	Open in IMG/M
3300012971\|Ga0126369_10632863	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1142	Open in IMG/M
3300012971\|Ga0126369_12892795	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300016294\|Ga0182041_10522377	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1033	Open in IMG/M
3300016422\|Ga0182039_10392520	Not Available	1176	Open in IMG/M
3300021560\|Ga0126371_10671270	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1185	Open in IMG/M
3300021560\|Ga0126371_11794361	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	735	Open in IMG/M
3300021560\|Ga0126371_12072546	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300021560\|Ga0126371_12193973	Not Available	666	Open in IMG/M
3300027527\|Ga0209684_1005644	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2070	Open in IMG/M
3300027646\|Ga0209466_1002780	All Organisms → cellular organisms → Bacteria	3602	Open in IMG/M
3300027646\|Ga0209466_1134953	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	503	Open in IMG/M
3300027654\|Ga0209799_1000943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5573	Open in IMG/M
3300027654\|Ga0209799_1028392	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1237	Open in IMG/M
3300027874\|Ga0209465_10000582	All Organisms → cellular organisms → Bacteria	16796	Open in IMG/M
3300027874\|Ga0209465_10052324	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300031543\|Ga0318516_10075905	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1870	Open in IMG/M
3300031544\|Ga0318534_10084237	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1810	Open in IMG/M
3300031546\|Ga0318538_10067609	All Organisms → cellular organisms → Bacteria → Proteobacteria	1787	Open in IMG/M
3300031561\|Ga0318528_10029463	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2692	Open in IMG/M
3300031640\|Ga0318555_10383561	Not Available	761	Open in IMG/M
3300031681\|Ga0318572_10737931	Not Available	586	Open in IMG/M
3300031719\|Ga0306917_10052482	All Organisms → cellular organisms → Bacteria	2750	Open in IMG/M
3300031770\|Ga0318521_10921500	Not Available	534	Open in IMG/M
3300031793\|Ga0318548_10177007	All Organisms → cellular organisms → Bacteria	1044	Open in IMG/M
3300031798\|Ga0318523_10482529	Not Available	614	Open in IMG/M
3300031832\|Ga0318499_10163036	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	869	Open in IMG/M
3300031879\|Ga0306919_11012576	Not Available	635	Open in IMG/M
3300032039\|Ga0318559_10516598	Not Available	557	Open in IMG/M
3300032041\|Ga0318549_10498023	Not Available	548	Open in IMG/M
3300032770\|Ga0335085_10799330	All Organisms → cellular organisms → Bacteria → Proteobacteria	1038	Open in IMG/M
3300032782\|Ga0335082_10037672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5095	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.00%
Host-Associated	Host-Associated	7.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.00%
Plants	Host-Associated → Plants	7.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	69.00%
Loam	Environmental → Terrestrial → Soil → Loam	22.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.00%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	22.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	18.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	51.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	22.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.00%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.00%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004281	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005983	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_101559352	3300000597	Forest Soil	AEAQRLLYYEGTVQWIAGSTMVISTDEGWSLKIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP*
AF_2010_repII_A001DRAFT_101198201	3300000793	Forest Soil	EAQRLLYYEGTVQWIAGSTMVISTDEGWSLKIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP*
Ga0066396_100338562	3300004267	Tropical Forest Soil	MEAPEAAYGARRPLERRAFMTLVAGSLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP*
Ga0066398_100904812	3300004268	Tropical Forest Soil	MTLVAGSLLVAPLAAEAQRLIYYEGTVQWIAGSTMVITTDEGWSLRIDLTRVPLSEYSGLGLRDRIMVTGLLSADGNY
Ga0066397_100431272	3300004281	Tropical Forest Soil	MALLVGSVLAAPVDANAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQGLVLRDRVLVTGLLSQDGNYFIGRSIRRSRLDYQSP*
Ga0066397_100637712	3300004281	Tropical Forest Soil	MEAPEAAYGARRPLERRAFMTLVAASLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSDYSGLALRDRIIVTGRLSADGNYLIGQSIQRTRLDYQAP*
Ga0066395_100481841	3300004633	Tropical Forest Soil	LIYYEGTVQWIAGSTMVISTDDGWSLRVDLTRVPQSEYQSLALRDRVLVTGLLSQDGNYLIGRSIQRSRLDYQAP*
Ga0066395_100631803	3300004633	Tropical Forest Soil	MTLVAGSLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLKIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP*
Ga0066395_101976172	3300004633	Tropical Forest Soil	MDAAEAARGARRRVERRILMALLVGSLVAAPLDANAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQGLVLRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP*
Ga0066388_1024759282	3300005332	Tropical Forest Soil	MTLVAGSLLVAPLAAEAQRLLYYEGTVQWIAGSTMIITTDEGWSLRIDLAQVPLSDYSGLALRDRIIVTGLLSADGNYLIGRSIRRTRLDYQAP*
Ga0066388_1036110001	3300005332	Tropical Forest Soil	MEAPEAAYGARRPLERRAFMTLVAGSLLVAPLAAEAQRLLYYEGTVQWIAGSTMVIATDDGWSLRIDLTRVPLSEYSGLGLRDRIIVTGLLSADGNYLIGRSIQRTRLDYQAP*
Ga0066388_1048161912	3300005332	Tropical Forest Soil	MALLVGSLLAAPLDANAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQGLALRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP*
Ga0066388_1059686282	3300005332	Tropical Forest Soil	GSTMVITTDDGWSLRVDLTHVPQSEYQGLVLRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP*
Ga0066905_1000642583	3300005713	Tropical Forest Soil	MALVAGGLLVLPLEAEAQRLLYYEGTVQWIAGSTMVIATDDGWSLRVDLTRVPQSDYSGLGLRDRVIVTGLLSSDGNYLIGRSIQRTRLDYQAP*
Ga0066905_1002333482	3300005713	Tropical Forest Soil	MTLVAASLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSDYSGLALRDRIIVTGRLSADGNYLIGQSIQRTRLDYQAP*
Ga0066903_1001961353	3300005764	Tropical Forest Soil	MTTMAASLLAPLDARAQRLLFYEGTVQWIAGATMIVATDEGMSLRVDLTRVPQSEYSGLGLRSRIIVAGQLSPDGNYLIGRSIQRARLDFQAP*
Ga0066903_1007623352	3300005764	Tropical Forest Soil	MALLVGGLLAVPLDAGAQRLIYYEGTVQWIAGSTMVISTDDGWSLRVDLTRVPQSEYQSLALRDRVLVTGLLSQDGNYLIGRSIQRSRLDYQAP*
Ga0081540_10406552	3300005983	Tabebuia Heterophylla Rhizosphere	MALLVGSVLAAPVDANAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTRVPQSEYQALVLRDRVLVTGLLSQDGNYLVGRSIQRSRLDYQAP*
Ga0075434_1000783712	3300006871	Populus Rhizosphere	MAIVAGGLFAMSLDAEAQRLIYYTGTVQWIAGSTMIVATDEGWSLRVDLTRIPLSEYSGLTIRDRIIVTGLLSQDGNYLVGTSIQRARLDYQAP*
Ga0075426_109213492	3300006903	Populus Rhizosphere	PADAAPDARLYVDRRTFMAIVAGGLFAMSLDAEAQRLIYYTGTVQWIAGSTMIVATDEGLSLRVDLTRIPLSEYSGLTIRDRIIVTGLLSQDGNYLVGTSIQRARLDYQAP*
Ga0075424_1000594695	3300006904	Populus Rhizosphere	MAIVAGGLFAMSLDAEAQRLIYYTGTVQWIAGSTMIVATDEGLSLRVDLTRIPLSEYSGLTIRDRIIVTGLLSQDGNYLVGTSIQRARLDYQAP*
Ga0075435_1001721632	3300007076	Populus Rhizosphere	MAIVAGGLFAMSLDAEAQRLIYYTGTVQWIAGSTMIVATDEGLSLRVDLTRIPLSEYSGLTIRDRIIVTGLLSQDGNYLVGTSIQRARLEYQAP*
Ga0114129_114547242	3300009147	Populus Rhizosphere	LKPADAAPDARLYVDRRTFMAIVAGGLFAMSLDAEAQRLIYYTGTVQWIAGSTMIVATDEGLSLRVDLTRIPLSEYSGLTIRDRIIVTGLLSQDGNYLVGTSIQRARLDYQAP*
Ga0075423_117916512	3300009162	Populus Rhizosphere	LDAEAQRLIYYTGTVQWIAGSTMIVATDEGLSLRVDLTRIPLSEYSGLTIRDRIIVTGLLSQDGNYLVGTSIQRARLDYQAP*
Ga0126374_100078132	3300009792	Tropical Forest Soil	MALLVGSLLAVPLDASAQRLIYYEGTVQWIAGSTMVISTDDGWSLRVDLTRVPQSEYQSLALRDRVLVTGLLSQDGNYLIGRSIQRSRLDYQAP*
Ga0126374_102225732	3300009792	Tropical Forest Soil	MTTMAASLLAPLDARAQRLLYYEGTVQWIAGATMIVATDEGLSLRVDLTRVPQSEYAGLGLRSRIIVAGQLSPDGNYLIGRSIQRARLDFQAP*
Ga0126380_100318162	3300010043	Tropical Forest Soil	MTTMAASVLMVPLDARAQRLLYYEGTVQWIAGMTMIVATDEGFSLRVDLTGVHQSEYSGLALRSRIIVSGLLSPDGNYLIGRSIQRARLDYQAP*
Ga0126380_100532913	3300010043	Tropical Forest Soil	MALLVGSLLAVPLDAGAQRLIYYEGTVQWIAGSTMVISTDDGWSLRVDLTRVPQSEYQSLALRDRVLVTGLLSQDGNYLIGRSIQRSRLDYQAP*
Ga0126380_107086382	3300010043	Tropical Forest Soil	MTLVAGSLLVAPLAAEAQRLIYYEGTVQWIAGSTMVITTDEGWSLRIDLTRVPLSEYSGLGLRDRIMVTGLLSADSNYLIGRSIQRTRLDYQAP*
Ga0126384_100057565	3300010046	Tropical Forest Soil	VERRILMALLVGSLLAAPLDANAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQGLALRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP*
Ga0126384_100106222	3300010046	Tropical Forest Soil	MAASLLAPLDARAQRLLYYEGTVQWIAGATMIVATDEGLSLRVDLTRVPQSEYAGLGLRSRIIVAGQLSPDGNYLIGRSIQRARLDFQAP*
Ga0126384_100509742	3300010046	Tropical Forest Soil	MTLVAGSLLVAPLAAEAQRLIYYEGTVQWIAGSTMVITTDEGWSLRIDLTRVPLSEYSGLGLRDRIMVTGLLSADGNYLIGRSIQRTRLDYQAP*
Ga0126384_103255602	3300010046	Tropical Forest Soil	MEAPEAAHGARRHLKRRAFMILVAGGLLVAPLAAEAQRLLYYEGTVQWIAGSTMVIATDDGWSLRIDLTRIPLSEYSGLGLRDRIIVTGLLSADGNYLIGRSIQRTRLDYQAP*
Ga0126384_108351532	3300010046	Tropical Forest Soil	MLPLDAESQRLLYYEGTVQWIAGSTMVIATDDGWSLRVDLTRVPQSEYSGLGLRDRVIVTGLLSGDGNYLIGRSIQRTRLDYQAP*
Ga0126384_119127872	3300010046	Tropical Forest Soil	MTLVAGSLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLRRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP*
Ga0126384_119127892	3300010046	Tropical Forest Soil	MEAPEAAYGARRPLERRAFMTLVAASLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDDGWSLRIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP*
Ga0126384_124421661	3300010046	Tropical Forest Soil	MALLVGSVLAAPVDANAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTRVPQSEYQALVLRDRVLVTGLLSQDGNYFVGRSIQRSRLDYQAP*
Ga0126382_103163432	3300010047	Tropical Forest Soil	VERRILMALLVGSVLAAPVDANAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQGLVLRDRVLVTGLLSQDGNYFIGRSIRRSRLDYQSP*
Ga0126373_100423646	3300010048	Tropical Forest Soil	MEAPEAAYGARRPLERRAFMTLVAGSLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLKIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP*
Ga0126373_100487441	3300010048	Tropical Forest Soil	LVGSLLAVPLDAGAQRLIYYEGTVQWIAGSTMVISTDDGWSLRVDLTRVPQSEYQSLALRDRVLVTGLLSQDGNYLIGRSIQRSRLDYQAP*
Ga0126373_108950772	3300010048	Tropical Forest Soil	VAPLAAEAQRLLYYEGTVQWIAGSTMVIATDDGWSLRIDLTRVPLSEYSGLGLRDRIIVTGLLSADGNYLIGRSIQRTRLDYQAP*
Ga0126373_123905861	3300010048	Tropical Forest Soil	AQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQGLVLRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP*
Ga0126370_101092052	3300010358	Tropical Forest Soil	MTLVAGGLLVAPLAAEAQRLLYYEGTVQWIAGSTMVIATDDGWSLRIDLTRVPLSEYSGLGLRDRIIVTGLLSADGNYLIGRSIQRTRLDYQAP*
Ga0126376_101120022	3300010359	Tropical Forest Soil	MTLVVGGLLVAPLAAEAQRLLYYEGTVQWIAGSTMVIATDDGWSLRIDLTRVPLSEYSGLGLRDRIIVTGLLSADGNYLIGRSIQRTRLDYQAP*
Ga0126376_102351813	3300010359	Tropical Forest Soil	MTLVAASLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDDGWSLRIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP*
Ga0126376_102740191	3300010359	Tropical Forest Soil	VERRILMALLVGSLLAAPLDANAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTRVPQSEYQGLVLRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP*
Ga0126376_106308752	3300010359	Tropical Forest Soil	VERRILMALLVGGLLAAPLDANAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQGLVLRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP*
Ga0126376_110671732	3300010359	Tropical Forest Soil	RTFMTTMAASLLAPLDARAQRLLYREGTVQWIAGATMIVATDEGLSLRVDLTRVPQSEYAGLGLRSRIIVAGQLSPDGNYLIGRSIQRARLDFQAP*
Ga0126372_100539682	3300010360	Tropical Forest Soil	MAASLLAPLDARAQRLLYYEGTVQWIAGATMIVATDEGLSLRVDLTRVPQSEYSGLGLRSRIIVAGQLSPDGNYLIGRSIQRARLDFQAP*
Ga0126372_114570511	3300010360	Tropical Forest Soil	MDAAEAARGARRRVERRILMALLVGSLLAAPLDATAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQGLVLRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP*
Ga0126372_116996181	3300010360	Tropical Forest Soil	RVQSVSMEAPEAAYGARRPLERRAFMTLVAGSLLVAPLSAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLKIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP*
Ga0126378_100899142	3300010361	Tropical Forest Soil	VERRILMALLIGIVLAAPVDAYAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQALVLRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP*
Ga0126377_100958462	3300010362	Tropical Forest Soil	MEAPEAAYGARRPLERRAFMTLVAASLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP*
Ga0126377_107659212	3300010362	Tropical Forest Soil	MEAPEAAHGARRPLGRRAFMTLVAGSLLVAPLAAEAQRLIYYEGTVQWIAGSTMVITTDEGWSLRIDLTRVPLSEYSGLGLRDRIMVTGLLSADGNYLIGRSIQRTRLDYQAP*
Ga0126379_102439372	3300010366	Tropical Forest Soil	MEAPEAAYGARRPLERRAFMTLVAASLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLKIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP*
Ga0126379_105319532	3300010366	Tropical Forest Soil	MAASLLAPLDARAQRLLFYEGTVQWIAGATMIVATDEGLSLRVDLTRVPQSEYAGLGLRSRIIVAGQLSPDGNYLIGRSIQRARLDFQAP*
Ga0126379_112904111	3300010366	Tropical Forest Soil	VERRILMALLIGSVLAAPVDAYAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQALVLRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP*
Ga0126381_1006545443	3300010376	Tropical Forest Soil	MTLVAGGLLVAPLAAEAQRLLYYEGTVQWIAGSTMVIATDDGWSLRIDLTRIPLSEYSGLGLRDRIIVTGLLSADGNYLIGRSIQRTRLDYQAP*
Ga0126381_1023850072	3300010376	Tropical Forest Soil	MEAPEAAHGARRSLERRVFMTLVAGSLLVSPLAAEAQRLLYYEGTIQWIAGSTMIITTDEGWSLRIDLAQVPLSDYSGLTLRDRIIVTGLLSADGNYLIGRSIRRTRLDYQAP*
Ga0126381_1029390431	3300010376	Tropical Forest Soil	VERRILMALLIGIVLAAPVDAYAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQALVLRDRVLVTGLLSQDGNYLIGRSIQRSRLDYQA
Ga0126383_108722134	3300010398	Tropical Forest Soil	MTLVAGSLLVSPLAAEAQRLLYYEGTIQWIAGSTMIITTDEGWSLRIDLAQVPLSDYSGLTLRDRIIVTGLLSADGNYLIGRSIRRTRLDYQAP*
Ga0126383_113969311	3300010398	Tropical Forest Soil	MVLLVGSVLAAPVDASAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTRVPQSEYQGLALRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP*
Ga0126383_120180721	3300010398	Tropical Forest Soil	MEAPAAAHGARRHLERRAFMILVAGGLLVAPLAAEAQRLLYYEGTVQWIAGSTMVIATDDGWSLRIDLTRVPLSEYSGLGLRDRIIVTGLLSADGNYLIGRSIQRTRLDYQAP*
Ga0126375_100929182	3300012948	Tropical Forest Soil	MTLAAGSLLVAALAAEAQRLLYYEGTVQWIAASTMVITTDEGWSLRIDLTKVPLSDYSGLGLRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP*
Ga0126375_107627772	3300012948	Tropical Forest Soil	VERRTFVALLVGSVLAAPVGANAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTRVPQSEYQALVLRDRVLVTGLLSQDGNYLVGRSIQRSRLDYQAP*
Ga0126375_108657842	3300012948	Tropical Forest Soil	LNRADAAPDARLYVDRRAFMAIVAGGLLAMSLDAEAQRLLYYTGTVQWIAGSTMIVATDEGWSLRVDLTRVPLSEYSGLTIRDRIIVTGLLSQDGNYLVGTSIQRARLDYQAP*
Ga0126375_120855421	3300012948	Tropical Forest Soil	QRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTRVPQSEYQGLALRDRVLVTGLLSQDGNYFVGRSIQRSRLDYQAP*
Ga0126369_102762332	3300012971	Tropical Forest Soil	MEAPEAAHGARRHLERRAFMTLVAGGLLVAPLAAEAQRLLYYEGTVQWIAGSTMVIATDDGWSLRIDLTRVPLSEYSGLGLRDRIIVTGLLSADGNYLIGRSIQRTRLDYQAP*
Ga0126369_104837182	3300012971	Tropical Forest Soil	MAASLLAPLDARAQRLLFYEGTVQWIAGATMIVATDEGMSLRVDLTRVPQSEYSGLGLRSRIIVAGQLSPDGNYLIGRSIQRARLDFQAP*
Ga0126369_106328631	3300012971	Tropical Forest Soil	VAASLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLKIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP*
Ga0126369_128927951	3300012971	Tropical Forest Soil	GSVLAAPVDAYAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQALVLRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP*
Ga0182041_105223772	3300016294	Soil	MTLVAGSLLVAPLTAEAQRLLYYEGTVQWIAGSTMVISTVEGWSLRIDLTRVPLSAYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0182039_103925203	3300016422	Soil	QRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSAYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0126371_106712702	3300021560	Tropical Forest Soil	MTLVAGGLLVAPLAAEAQRLLYYEGTVQWIAGSTMVIATDDGWSLRIDLTRVPLSEYSGLGLRDRIIVTGLLSADGNYLIGRSIQRTRLDYQAP
Ga0126371_117943611	3300021560	Tropical Forest Soil	MALLVGSLLAAPLDANAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQGLVLRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP
Ga0126371_120725461	3300021560	Tropical Forest Soil	TLVAGGLLVAPLAAEGQRLLYYEGTVQWIAGSTMVIATDEGWSLRIDLTRVPLSDYAGLGLRDRIIVTGLLSADGNYLIGRSIQRTRLDYQAP
Ga0126371_121939732	3300021560	Tropical Forest Soil	MTLVAGSLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLKIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIRRTRLDYQAP
Ga0209684_10056443	3300027527	Tropical Forest Soil	MDAAEAARGARRRVERRILMALLVGSLLAAPLDATAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQGLVLRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP
Ga0209466_10027805	3300027646	Tropical Forest Soil	MTLVAASLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSDYSGLALRDRIIVTGRLSADGNYLIGQSIQRTRLDYQAP
Ga0209466_11349532	3300027646	Tropical Forest Soil	AGGLLVLPLEAEAQRLLYYEGTVQWIAGSTMVIATDDGWSLRVDLTRVPQSDYSGLGLRDRVIVTGLLSSDGNYLIGRSIQRTRLDYQAP
Ga0209799_10009433	3300027654	Tropical Forest Soil	MTLVAASLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLRRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0209799_10283922	3300027654	Tropical Forest Soil	MALLVGSVLAAPVDANAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTHVPQSEYQGLVLRDRVLVTGLLSQDGNYFIGRSIQRSRLDYQAP
Ga0209465_1000058215	3300027874	Tropical Forest Soil	MTLVAGSLLVAPLAAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLKIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0209465_100523242	3300027874	Tropical Forest Soil	MALLVGSLVAAPLDANAQRLIYYEGTVQWIAGSTMVITTDDGWSLRVDLTRVPQSEYQALVLRDRVLVTGLLSQDGNYLVGRSIQRSRLDYQAP
Ga0318516_100759053	3300031543	Soil	MTLVAGSLLVAPLTAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0318534_100842373	3300031544	Soil	MTLVAGSLLVAPLTAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSAYSGLALRDRIIVTGLLSADG
Ga0318538_100676093	3300031546	Soil	TAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSAYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0318528_100294632	3300031561	Soil	MTLVAGSLLVAPLTAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSAYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0318555_103835611	3300031640	Soil	MEAPEAAYGARRPLERRAFMTLVAGSLLVAPLTAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSAYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0318572_107379311	3300031681	Soil	LYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSAYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0306917_100524825	3300031719	Soil	MTLVAGSLLVAPLTAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSAYSGLALRDRIIVTGLLSADGKYLIGQSIQRTRL
Ga0318521_109215001	3300031770	Soil	RRVQSVSMEAPEAAYGARRPLERRAFMTLVAGSLLVAPLTAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0318548_101770071	3300031793	Soil	AEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSDYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0318523_104825291	3300031798	Soil	PLERRAFMTLVAGSLLVAPLTAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSAYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0318499_101630361	3300031832	Soil	MTLVAGSLLVAPLTAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSAYSGLALRDRIIVTGLLSADGN
Ga0306919_110125762	3300031879	Soil	RRVQSVSMEAPEAAYGARRPLERRAFMTLVAGSLLVAPLTAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSAYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0318559_105165981	3300032039	Soil	LVAGSLLVAPLTAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSAYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0318549_104980231	3300032041	Soil	EAPEAAYGARRPLERRAFMTLVAGSLLVAPLTAEAQRLLYYEGTVQWIAGSTMVISTDEGWSLRIDLTRVPLSAYSGLALRDRIIVTGLLSADGNYLIGQSIQRTRLDYQAP
Ga0335085_107993302	3300032770	Soil	MAVVAGALLGMSRNAEGQRLLYVGTVQWIAGSTMILATDEGWSLRVDLTRVPQSEYSGLTIRDRVAVIGLLSADGNYLIGTSIQRARLDFQAP
Ga0335082_100376725	3300032782	Soil	MLARYPPQAYDGCAVNPEHRAFGARRRLERRTFLAMVAGGLLAMSSDAEGQRLLYYAGTVQWIAGSTMVVATDEGWSLRVDLTRVPLSDYSGLTIRDRVMVIGLLSQDGNYLVGTSIQRARLDFQAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F104609

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences