Metagenome / Metatranscriptome Family F104611

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F104611
Family Type	Metagenome / Metatranscriptome
Number of Sequences	100
Average Sequence Length	106 residues
Representative Sequence	MKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQGGPQ
Number of Associated Samples	75
Number of Associated Scaffolds	100

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.00 %
% of genes near scaffold ends (potentially truncated)	40.00 %
% of genes from short scaffolds (< 2000 bps)	83.00 %
Associated GOLD sequencing projects	67
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (54.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (64.000 % of family members)
Environment Ontology (ENVO)	Unclassified (65.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (100.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 62.39% β-sheet: 0.92% Coil/Unstructured: 36.70%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 100 Family Scaffolds
PF14342	DUF4396	26.00
PF00669	Flagellin_N	15.00
PF00700	Flagellin_C	11.00
PF08669	GCV_T_C	6.00
PF03061	4HBT	4.00
PF04134	DCC1-like	1.00
PF01322	Cytochrom_C_2	1.00
PF06240	COXG	1.00

COG ID	Name	Functional Category	% Frequency in 100 Family Scaffolds
COG1344	Flagellin and related hook-associated protein FlgL	Cell motility [N]	26.00
COG3011	Predicted thiol-disulfide oxidoreductase YuxK, DCC family	General function prediction only [R]	1.00
COG3427	Carbon monoxide dehydrogenase subunit CoxG	Energy production and conversion [C]	1.00
COG3909	Cytochrome c556	Energy production and conversion [C]	1.00

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.00 %
All Organisms	root	All Organisms	46.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.00 %
cellular organisms	root	All Organisms → cellular organisms	46.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.00 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	32.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.00 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.00 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.00 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	21.00 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	54.00 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	21.00 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	1.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002040\|GOScombined01_103751787	Not Available	711	Open in IMG/M
3300004369\|Ga0065726_10439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	62425	Open in IMG/M
3300005934\|Ga0066377_10212111	Not Available	596	Open in IMG/M
3300005971\|Ga0066370_10218004	Not Available	670	Open in IMG/M
3300006869\|Ga0075477_10222528	Not Available	767	Open in IMG/M
3300006870\|Ga0075479_10175046	Not Available	869	Open in IMG/M
3300006874\|Ga0075475_10280719	Not Available	692	Open in IMG/M
3300007113\|Ga0101666_1046990	Not Available	794	Open in IMG/M
3300007114\|Ga0101668_1081272	Not Available	690	Open in IMG/M
3300007116\|Ga0101667_1045763	Not Available	779	Open in IMG/M
3300008012\|Ga0075480_10243462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	933	Open in IMG/M
3300008012\|Ga0075480_10520695	Not Available	570	Open in IMG/M
3300010297\|Ga0129345_1097293	Not Available	1092	Open in IMG/M
3300010299\|Ga0129342_1335098	Not Available	517	Open in IMG/M
3300012528\|Ga0129352_10197523	All Organisms → cellular organisms → Bacteria → Proteobacteria	1287	Open in IMG/M
3300012919\|Ga0160422_10088732	Not Available	1815	Open in IMG/M
3300012920\|Ga0160423_10419271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	914	Open in IMG/M
3300012920\|Ga0160423_10991407	Not Available	563	Open in IMG/M
3300012920\|Ga0160423_10994966	Not Available	561	Open in IMG/M
3300012928\|Ga0163110_10742706	Not Available	768	Open in IMG/M
3300012936\|Ga0163109_10667122	Not Available	761	Open in IMG/M
3300012936\|Ga0163109_10675838	Not Available	755	Open in IMG/M
3300012954\|Ga0163111_10725550	Not Available	940	Open in IMG/M
3300016791\|Ga0182095_1305682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	908	Open in IMG/M
3300017818\|Ga0181565_10646718	Not Available	675	Open in IMG/M
3300017824\|Ga0181552_10081979	All Organisms → cellular organisms → Bacteria → Proteobacteria	1822	Open in IMG/M
3300017949\|Ga0181584_10114118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1838	Open in IMG/M
3300017949\|Ga0181584_10147306	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1581	Open in IMG/M
3300017950\|Ga0181607_10011344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7140	Open in IMG/M
3300017950\|Ga0181607_10106824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1759	Open in IMG/M
3300017951\|Ga0181577_10264783	Not Available	1126	Open in IMG/M
3300017951\|Ga0181577_10382010	Not Available	899	Open in IMG/M
3300017951\|Ga0181577_10506248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	755	Open in IMG/M
3300017952\|Ga0181583_10047955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3027	Open in IMG/M
3300017952\|Ga0181583_10258316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1121	Open in IMG/M
3300017952\|Ga0181583_10930754	Not Available	504	Open in IMG/M
3300017956\|Ga0181580_10022471	All Organisms → cellular organisms → Bacteria	4940	Open in IMG/M
3300017956\|Ga0181580_10073748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2537	Open in IMG/M
3300017957\|Ga0181571_10213987	All Organisms → cellular organisms → Bacteria → Proteobacteria	1244	Open in IMG/M
3300017957\|Ga0181571_10510840	Not Available	733	Open in IMG/M
3300017958\|Ga0181582_10077811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2436	Open in IMG/M
3300017962\|Ga0181581_10313782	Not Available	1004	Open in IMG/M
3300017964\|Ga0181589_10164619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1563	Open in IMG/M
3300017964\|Ga0181589_10243135	Not Available	1234	Open in IMG/M
3300017967\|Ga0181590_10091276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	2390	Open in IMG/M
3300017967\|Ga0181590_10175463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1625	Open in IMG/M
3300017968\|Ga0181587_10047512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3192	Open in IMG/M
3300017969\|Ga0181585_10013895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6687	Open in IMG/M
3300017969\|Ga0181585_10074343	All Organisms → cellular organisms → Bacteria	2596	Open in IMG/M
3300017985\|Ga0181576_10163362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1472	Open in IMG/M
3300017986\|Ga0181569_10546453	Not Available	779	Open in IMG/M
3300018041\|Ga0181601_10032521	All Organisms → cellular organisms → Bacteria → Proteobacteria	3847	Open in IMG/M
3300018410\|Ga0181561_10133529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1296	Open in IMG/M
3300018413\|Ga0181560_10090026	All Organisms → cellular organisms → Bacteria → Proteobacteria	1666	Open in IMG/M
3300018413\|Ga0181560_10434313	Not Available	600	Open in IMG/M
3300018413\|Ga0181560_10515888	Not Available	543	Open in IMG/M
3300018415\|Ga0181559_10081220	All Organisms → cellular organisms → Bacteria → Proteobacteria	2039	Open in IMG/M
3300018415\|Ga0181559_10727487	Not Available	531	Open in IMG/M
3300018417\|Ga0181558_10216780	Not Available	1087	Open in IMG/M
3300018418\|Ga0181567_10511717	Not Available	784	Open in IMG/M
3300018418\|Ga0181567_11012843	Not Available	518	Open in IMG/M
3300018421\|Ga0181592_10029409	All Organisms → cellular organisms → Bacteria → Proteobacteria	4455	Open in IMG/M
3300018421\|Ga0181592_10202601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1482	Open in IMG/M
3300018421\|Ga0181592_10549624	Not Available	791	Open in IMG/M
3300018424\|Ga0181591_10052797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	3407	Open in IMG/M
3300018424\|Ga0181591_10278479	Not Available	1283	Open in IMG/M
3300018426\|Ga0181566_10198843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1484	Open in IMG/M
3300018426\|Ga0181566_10242635	All Organisms → cellular organisms → Bacteria → Proteobacteria	1319	Open in IMG/M
3300018426\|Ga0181566_10977630	Not Available	571	Open in IMG/M
3300018428\|Ga0181568_10866308	Not Available	695	Open in IMG/M
3300018876\|Ga0181564_10295298	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	906	Open in IMG/M
3300019253\|Ga0182064_1388177	Not Available	521	Open in IMG/M
3300019262\|Ga0182066_1552944	Not Available	1010	Open in IMG/M
3300019283\|Ga0182058_1370311	Not Available	547	Open in IMG/M
3300019459\|Ga0181562_10125465	All Organisms → cellular organisms → Bacteria → Proteobacteria	1424	Open in IMG/M
3300020056\|Ga0181574_10702885	Not Available	528	Open in IMG/M
3300020207\|Ga0181570_10102639	Not Available	1617	Open in IMG/M
3300020378\|Ga0211527_10198837	Not Available	560	Open in IMG/M
3300020391\|Ga0211675_10143766	Not Available	1067	Open in IMG/M
3300020392\|Ga0211666_10351743	Not Available	545	Open in IMG/M
3300020397\|Ga0211583_10052503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1592	Open in IMG/M
3300020403\|Ga0211532_10148804	Not Available	962	Open in IMG/M
3300020403\|Ga0211532_10239149	Not Available	713	Open in IMG/M
3300020406\|Ga0211668_10158145	Not Available	913	Open in IMG/M
3300020408\|Ga0211651_10118473	Not Available	1079	Open in IMG/M
3300020414\|Ga0211523_10053740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1729	Open in IMG/M
3300020439\|Ga0211558_10051091	All Organisms → cellular organisms → Bacteria → Proteobacteria	2064	Open in IMG/M
3300020601\|Ga0181557_1051537	All Organisms → cellular organisms → Bacteria → Proteobacteria	2311	Open in IMG/M
3300020810\|Ga0181598_1186745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	805	Open in IMG/M
3300021379\|Ga0213864_10031446	All Organisms → cellular organisms → Bacteria	2477	Open in IMG/M
3300022921\|Ga0255765_1100485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1497	Open in IMG/M
3300022934\|Ga0255781_10406136	Not Available	576	Open in IMG/M
3300022939\|Ga0255754_10241945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	883	Open in IMG/M
3300023105\|Ga0255782_10385804	Not Available	630	Open in IMG/M
3300023108\|Ga0255784_10474728	Not Available	576	Open in IMG/M
3300023117\|Ga0255757_10149626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1306	Open in IMG/M
3300023119\|Ga0255762_10124866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1507	Open in IMG/M
3300023172\|Ga0255766_10156558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1294	Open in IMG/M
3300025840\|Ga0208917_1189001	Not Available	692	Open in IMG/M
3300027830\|Ga0209359_10586366	Not Available	514	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	99.00%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.00%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	65.00%
Oceanic	Environmental → Aquatic → Marine → Oceanic	11.00%
Coastal	Environmental → Aquatic → Marine → Coastal	10.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.00%
Volcanic	Environmental → Aquatic → Marine → Volcanic	3.00%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	1.00%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	64.00%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	10.00%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.00%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	8.00%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	3.00%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	3.00%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.00%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.00%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	64.00%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	10.00%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	7.00%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	7.00%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.00%
Volcanic Co2 Seep Seawater	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater	3.00%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.00%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	1.00%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.00%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.00%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline	1.00%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300004369	Saline microbial communities from the South Caspian sea - cas-15	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300005971	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_SurfaceA_ad_5m_LV_A	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300007113	Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble' site, Water-is	Environmental	Open in IMG/M
3300007114	Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble', waterEBis4	Environmental	Open in IMG/M
3300007116	Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble' site, waterEBis3	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300012528	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300016791	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 041412BS metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017950	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041413US metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017957	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101407AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017985	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017986	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018041	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG (megahit assembly)	Environmental	Open in IMG/M
3300018410	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011510BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018415	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011508AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018417	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011507BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018418	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019253	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101410AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019262	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101412AT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019283	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 101404CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019459	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011511BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020207	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101406AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020378	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556006-ERR599102)	Environmental	Open in IMG/M
3300020391	Marine microbial communities from Tara Oceans - TARA_B100000989 (ERX556130-ERR598967)	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020397	Marine microbial communities from Tara Oceans - TARA_B100000123 (ERX556052-ERR599075)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020406	Marine microbial communities from Tara Oceans - TARA_B100000886 (ERX555926-ERR599024)	Environmental	Open in IMG/M
3300020408	Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020439	Marine microbial communities from Tara Oceans - TARA_B100001939 (ERX556062-ERR599029)	Environmental	Open in IMG/M
3300020601	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011506CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020810	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041404US metaG (spades assembly)	Environmental	Open in IMG/M
3300021379	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO247	Environmental	Open in IMG/M
3300022921	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG	Environmental	Open in IMG/M
3300022934	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG	Environmental	Open in IMG/M
3300022939	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101412BT metaG	Environmental	Open in IMG/M
3300023105	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101408AT metaG	Environmental	Open in IMG/M
3300023108	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101403AT metaG	Environmental	Open in IMG/M
3300023117	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG	Environmental	Open in IMG/M
3300023119	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG	Environmental	Open in IMG/M
3300023172	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG	Environmental	Open in IMG/M
3300025840	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027830	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GOScombined01_1037517871	3300002040	Marine	MLIFINASEAQAWTKYGGDTSCKRILANDNDEAFTERVKGWTFGYISALNEIMRQRFKTPPENELIWQAIKEFCADNLDSSHYVASATIYIELLRDQGGPQ*
Ga0065726_1043945	3300004369	Saline	MKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPL*
Ga0066377_102121111	3300005934	Marine	MMKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATI
Ga0066370_102180041	3300005971	Marine	GVFLARQSLLIANNQTEIIVMRTYYLPLIILLIAISEAQAWTKYGGDANCKIIVENSNDEIFTERAKGWTFGYISALNEMMQQRFQEAPEEELIWQAVKKFCADNPDASHYVASARIYIEVLRDQGGPQ*
Ga0075477_102225281	3300006869	Aqueous	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIEVLRNQGGPQ*
Ga0075479_101750462	3300006870	Aqueous	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEYCADNPDANHYVASASIYIEVLRNQGGPQ*
Ga0075475_102807191	3300006874	Aqueous	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEIMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIEVLRNQGGPQ*
Ga0101666_10469901	3300007113	Volcanic Co2 Seep Seawater	MKTYYLPLIMLLAVNNDAQAWTKYGGDATCKTIQANVNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASANIYIELLRDQGGPQ*
Ga0101668_10812722	3300007114	Volcanic Co2 Seep Seawater	MTKIVYLPFVLMLIAATEIQAWTKYGGDVTCKTILANNNDEAFTERAKGWTFGYISALNEIMRQRFETPLKEELIWQALKEFCADNQNSSHYVASANIYIELLRDQGGPQ*
Ga0101667_10457631	3300007116	Volcanic Co2 Seep Seawater	MMNRVYIPLMLMLITASEVQAWTKYGGDATCKTIQANVKDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYVELLRDQGGPQ*
Ga0075480_102434622	3300008012	Aqueous	VLFWRAKPHFIANNQTETKVMKRYYLLLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ*
Ga0075480_105206952	3300008012	Aqueous	MLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQGGPQ*
Ga0129345_10972932	3300010297	Freshwater To Marine Saline Gradient	VLFWRAKPHFIANNQTETKVMKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ*
Ga0129342_13350981	3300010299	Freshwater To Marine Saline Gradient	IMLLIATSEAQAWTKYGGDANCKTIVASDNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ*
Ga0129352_101975233	3300012528	Aqueous	FWRAKPHFIANNQTETKVMKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ*
Ga0160422_100887323	3300012919	Seawater	MLIFINASEAQAWTKYGGDTSCKRILANDNDEAFTERAKGWTFGYISALNEIMRQRFKTPPENELIWQAIKEFCADNLDSSHYVASATIYIELLRDQGGPQ*
Ga0160423_104192712	3300012920	Surface Seawater	MLMLITTSEVQAWTKYGGDANCKSILANDSDEAFSERAKGWTFGYISALNEMMRQRFETPPHDELIWQAVKEFCADNPDASHYVAS
Ga0160423_109914072	3300012920	Surface Seawater	MKTYYLPFIILLIVNNEAKAWTKYGGDASCKTLQANVNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYEASATIYIELLRDQGGPQ*
Ga0160423_109949663	3300012920	Surface Seawater	MMKRVYIPLMLMLITASEVQAWTKYGGDASCKSILANDNDEANSERAKGWTFGYISALNEMMRQRFETPPHDELIWQAVKEFCADNPDASHYVAS
Ga0163110_107427061	3300012928	Surface Seawater	MLITASEVQAWTKYWGDDSCKTILANDNDEVFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQGGPQ*
Ga0163109_106671222	3300012936	Surface Seawater	MLMLITTSEVQAWTKYGGDANCKSILANDSDEAFSERAKGWTFGYISALNEMMRQRFETPPQDELIWQAVKGFCANNPDASQYVASATIYIELLRDQGGPQ*
Ga0163109_106758381	3300012936	Surface Seawater	MLMLITASEVQAWTKYGGDASCETILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQALKEFCADNSDASHYV
Ga0163111_107255501	3300012954	Surface Seawater	SRLVANSQTETKVMKTYYLPLIMLLIVCSEARAWTKYGGDANCKTILTSENDGTFTERAKGWTFGYISALNEMMQQRFQEPPEEDLIWQAVKEFCAENPNANHYVASASIYIEVLRDQGGPH*
Ga0182095_13056822	3300016791	Salt Marsh	MKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFNERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIELLRDQGGPQ
Ga0181565_106467182	3300017818	Salt Marsh	MMKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKIFCADNPDESHYVASATIYIELLRDQGGPQ
Ga0181552_100819794	3300017824	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIELLRDQGGPQ
Ga0181584_101141181	3300017949	Salt Marsh	MKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQTVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0181584_101473061	3300017949	Salt Marsh	MMKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQGGPQ
Ga0181607_100113444	3300017950	Salt Marsh	MKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFNERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0181607_101068243	3300017950	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDSNHYVASASIYIELLRDQGGPQ
Ga0181577_102647832	3300017951	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEESIWQAVKEFCADNPDANHYVASASIYIEVLRDQGGPQ
Ga0181577_103820102	3300017951	Salt Marsh	MKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0181577_105062481	3300017951	Salt Marsh	MMKRVYLPIVLMLFTGSEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQG
Ga0181583_100479551	3300017952	Salt Marsh	MKTYYLPLIMLLLATSESQAWTKYGGDASCKTIKASDNDKTFTERAKGWTFGYISALNEMMKQRFQEPPEEELHWQAVKEFCADNPDANHYVASAS
Ga0181583_102583162	3300017952	Salt Marsh	MMKRVYLPLMLMLITASQVQAWTKYGGDASCKSILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQGGPQ
Ga0181583_109307541	3300017952	Salt Marsh	AQAWTKYGGDANCKTIVASDNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0181580_100224714	3300017956	Salt Marsh	MKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQGGPQ
Ga0181580_100737484	3300017956	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIEVLRDQGGPQ
Ga0181571_102139873	3300017957	Salt Marsh	VMKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQQPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0181571_105108401	3300017957	Salt Marsh	MMKSVYLPLMLMLITASEVQAWTKYGGDASCKSILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQGGPQ
Ga0181582_100778111	3300017958	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISVLDEMMQQRFQEPPEEELIWQAVKEFCADNPDANH
Ga0181581_103137821	3300017962	Salt Marsh	TETKVMKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0181589_101646192	3300017964	Salt Marsh	MMKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMHQRFVTPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQGGPQ
Ga0181589_102431351	3300017964	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDANCKTIVASDNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0181590_100912762	3300017967	Salt Marsh	MFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLKDQGGPQ
Ga0181590_101754632	3300017967	Salt Marsh	MKTYYLPLIMLLLATSESQAWTKYGGDASCKTIKASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIEVLRDQGGPQ
Ga0181587_100475124	3300017968	Salt Marsh	MKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERIKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0181585_100138954	3300017969	Salt Marsh	MKTYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERIKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPTASHYVASASIYIELLRDQGGPQ
Ga0181585_100743433	3300017969	Salt Marsh	MKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQGGPR
Ga0181576_101633621	3300017985	Salt Marsh	MMKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVVSATIY
Ga0181569_105464531	3300017986	Salt Marsh	YYLPLIMFLIATSEAKAWTKYGGDANCKTIVASDNDETFTERAKGWTFGYISALNEMMQQRFQQPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0181601_100325214	3300018041	Salt Marsh	MKSYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIELLRDQGGPQ
Ga0181561_101335291	3300018410	Salt Marsh	MKTYYLPLIMLLIATSEAQSWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIEVLRDQGGPQ
Ga0181560_100900264	3300018413	Salt Marsh	MKRYYLLLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0181560_104343132	3300018413	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDANCKTIVASDNDETFTERAKGWTFGYISALNEMMQQRFQQPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0181560_105158881	3300018413	Salt Marsh	YGGDASCKTILANDNDEALSERAKGWTFGYISALNEMMQQRFETPPQDELIWHAVKEFCADNPDASHYVASATIYIELLRDQGGPQ
Ga0181559_100812202	3300018415	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTTGAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIEVLRDQGGPQ
Ga0181559_107274871	3300018415	Salt Marsh	ITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQGGPQ
Ga0181558_102167802	3300018417	Salt Marsh	MKTYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQQPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0181567_105117172	3300018418	Salt Marsh	MMKRVYIPLMLMLITASEVQAWTKYGGDASCKSILANDNDEAFSERAKGWTFGYISALNEMMHQRFVTPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQGGPK
Ga0181567_110128431	3300018418	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIEVLR
Ga0181592_100294094	3300018421	Salt Marsh	MKTYYLPLIMLLLATSESQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPVEELIWQAVKEFCADNPDANHYVASASIYIEVLRDQGGPQ
Ga0181592_102026011	3300018421	Salt Marsh	MKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYV
Ga0181592_105496241	3300018421	Salt Marsh	MKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDANHYVASATIYIELLRDQGGPQ
Ga0181591_100527973	3300018424	Salt Marsh	MKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQQPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0181591_102784792	3300018424	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKVFCADNPDANHYVASASIYIEVLRDQGGPQ
Ga0181566_101988431	3300018426	Salt Marsh	MMKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFEMPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQ
Ga0181566_102426352	3300018426	Salt Marsh	MMKSVYLPLMLMLITASEVQAWTKYGGDTSCKSILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWHAVKEFCADNPDASHYVASATIYIELLRDQGGPQ
Ga0181566_109776301	3300018426	Salt Marsh	MKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHY
Ga0181568_108663082	3300018428	Salt Marsh	ATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIEVLRDQGGPQ
Ga0181564_102952983	3300018876	Salt Marsh	AQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0182064_13881771	3300019253	Salt Marsh	ITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKIFCADNPDESHYVASATIYIELLRDQGGPQ
Ga0182066_15529442	3300019262	Salt Marsh	EAQAWTKYGGDANCKIILASGNDETFTERIKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIEVLRDQGGPQ
Ga0182058_13703112	3300019283	Salt Marsh	MMKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQGGPK
Ga0181562_101254653	3300019459	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIEVLRNQGGPK
Ga0181574_107028851	3300020056	Salt Marsh	MMKRVYIPLMLMLITASEVQAWTKYGGDASCKSILANDNDEAFSERAKGWTFGYISALNEMMHQRFVTPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRD
Ga0181570_101026393	3300020207	Salt Marsh	MMKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVVSATIYIELLRDQGGPQ
Ga0211527_101988371	3300020378	Marine	MTKIVYLPFVLMLIAATEIQAWTKYGGDVTCKTILANDDDEVFTERAKGWTFGYISALNEIMRQRFETPLEEELIWQALKEFCADNQNSSHYVASANIYIELLRDQGGPQ
Ga0211675_101437662	3300020391	Marine	MLIFINASEAQAWTKYGGDTSCKRILANDNDEAFTERAKGWTFGYISALNEIMRQRFKTPPQDELIWQAIKEFCADNLDSSHYVASATIYIELLRDQGGPQ
Ga0211666_103517432	3300020392	Marine	MKIYYLPLIMLLIASSEARAWTKYGGDAKCKTILTSDNDRIFTERAKGWTFGYISALNEMMQQRLKEPPEEDLIWQAVKEFCAENPDANHYVASATIYIEVL
Ga0211583_100525032	3300020397	Marine	MLIFINASEAQAWTKYGGDTSCKRILANDNDEAFTERAKGWTFGYISALNEIMRQRFKTPPENELIWQAIKEFCADNLDSSHYVASATIYIELLRDQGGPQ
Ga0211532_101488041	3300020403	Marine	MIKRVYLILILMLITASEVQAWTKYGGDASCKTILANNNDEAFSEGAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNQDASHYVASATIYIELLRGQGGPQ
Ga0211532_102391492	3300020403	Marine	MIKRVYLPFMLMLITASEVQAWTKYGGDVSCKTILANDNDEAFTERAKGWTFGYISALNEIMRQRFETPLEEELIWQALKEFCADNQNSSHYVASANIYIELLRDQGGPQ
Ga0211668_101581452	3300020406	Marine	CHFTYKKIFLLLMLIFINASEAQAWTKYGGDTSCKRILANDNDEAFTERAKGWTFGYISALNEIMRQRFKTPPENELIWQAIKEFCADNLDSSHYVASATIYIELLRDQGGPQ
Ga0211651_101184731	3300020408	Marine	MLITTSEVQAWTKYGGDANCKSILANDSDEAFSERAKGWTFGYISALNEMMRQRFETPPQDELIWQAVKGFCANNPDASQYVASATIYIELLRDQGGPQ
Ga0211523_100537401	3300020414	Marine	MGKIVYLPLVIILIAASEIQAWTKYGGDVTCKTILANDDDEVFTERAKGWTFGYISALNEMMRQRFETPLEEELIWQAVKEFCADNQNASHYVASATIYIELLRDQGGPR
Ga0211558_100510912	3300020439	Marine	MLIFINASEAQAWTKYGGDTSCKRILANDNDEAFTERAKGWTFGYISALNEIMRQRFKTPPENELIWQAIKEFCADNLDSSHYVASASIYIELLRDQGGPQ
Ga0181557_10515372	3300020601	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIEVLRNQGGPQ
Ga0181598_11867452	3300020810	Salt Marsh	MKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQG
Ga0213864_100314463	3300021379	Seawater	MMKRVYLPLMLMLITASQVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYIELLKDQGGPQ
Ga0255765_11004853	3300022921	Salt Marsh	VLFWRAKPHFIANNQTETKVMKRYYLPLIMFLIATSEAQAWTKYGGDANCKIILASGNDETFTERAKGWTFGYISALNEMMQQRFQEPPEEELIWQAVKEFCADNPNASHYVASASIYIELLRDQGGPQ
Ga0255781_104061362	3300022934	Salt Marsh	MKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVVSATIYI
Ga0255754_102419452	3300022939	Salt Marsh	MMKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIY
Ga0255782_103858041	3300023105	Salt Marsh	MMKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYV
Ga0255784_104747282	3300023108	Salt Marsh	MMKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYI
Ga0255757_101496262	3300023117	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISVLNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIELLRDQGGPQ
Ga0255762_101248663	3300023119	Salt Marsh	MMKRVYLPLMLMLITASEVQAWTKYGGDASCKTILANDNDEAFSERAKGWTFGYISALNEMMQQRFETPPQDELIWQAVKEFCADNPDASHYVASATIYIELLRDQGGPR
Ga0255766_101565581	3300023172	Salt Marsh	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISVLNEMMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIEVLRDQGGPQ
Ga0208917_11890011	3300025840	Aqueous	MKTYYLPLIMLLIATSEAQAWTKYGGDASCKTIMASDNDKTFTERAKGWTFGYISALNEIMQQRFQEPPEEELIWQAVKEFCADNPDANHYVASASIYIEVLRNQGGPQ
Ga0209359_105863661	3300027830	Marine	MTKIVYLPFVLMLIVATEIQAWTKYGGDVTCKTILANDNDEAFTERAKGWTFGYISALNEIMRQRFETPLEEELIWQALKEFCADNQNSSHYVASANIYIELLRDQGGPQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F104611

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences